Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 521 238.2 12299412 96.0% 11807435 93.0

Breseq alignment

N/A

GATK/CNVnator alignment

BRESEQ :: bam2aln output
GCTGGATTTATAGCCATGTACGTCCGGGCTTGGCAGCAGGGAACCGTAGAAGCCGGTTGCCTGTGCTTTAGACAGTTCGCTCACCGCATCCACACCGTTAATGCCAATGCCGATGATATCGGCCGCTTTAAAGCCCTGACCTTCCGTCGCGCGTACGCCGCCCAGCACGGTGCTGTCGTTCATACCG  >  NC_000913/1983291‑1983477
                                                                                             |                                                                                             
GCTGGATTTATAGCCATGTACGTCCGGGCTTGGCAGCAGGGAACCGTAGAAGCCGGTTGCCTGTGCTTTAGACAGTTCGCTCACCGCATCCACG                                                                                               >  SRR4302532.977859/1‑94 (MQ=60)
GCTGGATTTATAGCCATGTACGTCCGGGCTTGGCAGCAGGGAACCGTAGAAGCCGGTTGCCTGTGCTTTAGACAGTTCGCTCACCGCATCCACG                                                                                               <  SRR4302532.6197946/94‑1 (MQ=60)
  TGGATTTATAGCCATGTACGTCCGGGCTTGGTAGCAGGGAACCGTAGAAGCCGGTTGCCTGTGCTTTAGACAGTTCGCTCACCGCATCCACGCC                                                                                             <  SRR4302532.4337567/94‑1 (MQ=60)
  TGGATTTATAGCCATGTACGTCCGGGCTTGGCAGCAGGGAACCGTAGAAGCCGGTTGCCTGTGCTTTAGACAGTTCGCTCACCGCATCCACACC                                                                                             <  SRR4302532.820635/94‑1 (MQ=60)
  TGGATTTATAGCCATGTACGTCCGGGCTTGGCAGCAGGGAACCGTAGAAGCCGGTTGCCTGTGCTTTAGACAGTTCGCTCACCGCATCCACACC                                                                                             <  SRR4302532.820633/94‑1 (MQ=60)
   GGATTTATAGCCATGTACGTCCGGGCTTGGCAGCAGGGAACCGTAGAAGCCGGTTGCCTGTGCTTTAGACAGTTCGCTCACCGCATCCACGCCG                                                                                            <  SRR4302532.3927687/94‑1 (MQ=60)
   GGATTTATAGCCATGTACGTCCGGGCTTGGCAGCAGGGAACCGTAGAAGCCGGTTGCCTGTGCTTTAGACAGTTCGCTCACCGCATCCACACCG                                                                                            >  SRR4302532.3368480/1‑94 (MQ=60)
     ATTTATAGCCATGTACGTCCGGGCTTGGCAGCAGGGAACCGTAGAAGCCGGTTGCCTGTGCTTTAGACAGTTCGCTCACCGCATCCACGCCGTT                                                                                          >  SRR4302532.5773286/1‑94 (MQ=60)
      TTTATAGCCATGTACGTCCGGGCTTGGCAGCAGGGAACCGTAGAAGCCGGTTGCCTGTGCTTTAGACAGTTCGCTCACCGCATCCACGCCGTTA                                                                                         >  SRR4302532.2025014/1‑94 (MQ=60)
       TTATAGCCATGTACGTCCGGGCTTGGCAGCAGGGAACCGTAGAAGCCGGTTGCCTGTGCTTTAGACAGTTCGCTCACCGCATCCACACCGTTAA                                                                                        >  SRR4302532.1256846/1‑94 (MQ=60)
        TATAGCCATGTACGTCCGGGCTTGGCAGCAGGGAACCGTAGAAGCCGGTTGCCTGTGCTTTAGACAGTTCGCTCACCGCATCCACGCCGTTAAT                                                                                       <  SRR4302532.3114879/94‑1 (MQ=60)
         ATAGCCATGTACGTCCGGGCTTGGCAGCAGGGAACCGTAGAAGCCGGTTGCCTGTGCTTTAGACAGTTCGCTCACCGCATCCACACCGTTAATG                                                                                      >  SRR4302532.6336468/1‑94 (MQ=60)
         ATAGCCATGTACGTCCGGGCTTGGCAGCAGGGAACCGTAGAAGCCGGTTGCCTGTGCTTTAGACAGTTCGCTCACCGCATCCACACCGTTAATG                                                                                      >  SRR4302532.1270734/1‑94 (MQ=60)
            GCCATGTACGTCCGGGCTTGGCAGCAGGGAACCGTAGAAGCCGGTTGCCTGTGCTTTAGACAGTTCGCTCACCGCATCCACACCGTTAATGCCA                                                                                   >  SRR4302532.3250517/1‑94 (MQ=60)
             CCATGTACGTCCGGGCTTGGCAGCAGGGAACCGTAGAAGCCGGTTGCCTGTGCTTTAGACAGTTCGCTCACCGCATCCACACCGTTAATGCCAA                                                                                  >  SRR4302532.143480/1‑94 (MQ=60)
             CCATGTACGTCCGGGCTTGGCAGCAGGGAACCGTAGAAGCCGGTTGCCTGTGCTTTAGACAGTTCGCTCACCGCATCCACACCGTTAATGCCAA                                                                                  >  SRR4302532.5171731/1‑94 (MQ=60)
              CATGTACGGCCGGGCTGGGCAGCAGGCAACCGTAGAAGCCGGTTGCCTGTGCTTTAGACAGTTCGCTCACCGCATCCACGCCGTTAATGCCAAT                                                                                 <  SRR4302532.1380815/94‑1 (MQ=60)
               ATGTACGTCCGGGCTTGGCAGCAGGGAACCGTAGAAGCCGGTTGCCTGTGCTTTAGACAGTTCGCTCACCGCATCCACGCCGTTAATGCCAATG                                                                                >  SRR4302532.4121035/1‑94 (MQ=60)
               ATGTACGTCCGGGCTTGGCAGCAGGGAACCGTAGAAGCCGGTTGCCTGTGCTTTAGACAGTTCGCTCACCGCATCCACACCGTTAATGCCAATG                                                                                >  SRR4302532.5743896/1‑94 (MQ=60)
               ATGTACGTCCGGGCTTGGCAGCAGGGAACCGTAGAAGCCGGTTGCCTGTGCTTTAGACAGTTCGCTCACCGCATCCACACCGTTAATGCCAATG                                                                                >  SRR4302532.5264931/1‑94 (MQ=60)
               ATGTACGTCCGGGCTTGGCAGCAGGGAACCGTAGAAGCCGGTTGCCTGTGCTTTAGACAGTTCGCTCACCGCATCCACACCGTTAATGCCAATG                                                                                >  SRR4302532.5095186/1‑94 (MQ=60)
               ATGTACGTCCGGGCTTGGCAGCAGGGAACCGTAGAAGCCGGTTGCCTGTGCTTTAGACAGTTCGCTCACCGCATCCACACCGTTAATGCCAATG                                                                                <  SRR4302532.3376574/94‑1 (MQ=60)
               ATGTACGTCCGGGCTTGGCAGCAGGGAACCGTAGAAGCCGGCTGCCTGTGCTTTAGACAGTTCGCTCACCGCATCCACGCCGTTAATGCCAATG                                                                                >  SRR4302532.4930323/1‑94 (MQ=60)
                TGTACGTCCGGGCTTGGCAGCAGGGAACCGTAGAAGCCGGTTGCCTGTGCTTTAGACAGTTCGCTCACCGCATCCACACCGTTAATGCCAATGC                                                                               >  SRR4302532.4904328/1‑94 (MQ=60)
                 GTACGTCCGGGCTTGGCAGCAGGGAACCGTAGAAGCCGGTTGCCTGTGCTTTAGACAGTTCGCTCACCGCATCCACGCCGTTAATGCCAATGCC                                                                              <  SRR4302532.1485236/94‑1 (MQ=60)
                 GTACGTCCGGGCTTGGCAGCAGGGAACCGTAGAAGCCGGTTGCCTGTGCTTTAGACAGTTCGCTCACCGCATCCACGCCGTTAATGCCAATGCC                                                                              <  SRR4302532.1924432/94‑1 (MQ=60)
                  TACGTCCGGGCTTGGCAGCAGGGAACCGTAGAAGCCGGTTGCCTGTGCTTTAGACAGTTCGCTCACCGCATCCACACCGTTAATGCCAATGCCG                                                                             <  SRR4302532.4657742/94‑1 (MQ=60)
                    CGTCCGGGCTTGGCAGCAGGGAACCGTAGAAGCCGGTTGCCTGTGCTTTAGACAGTTCGCTCACCGCATCCACACCGTTAATGCCAATGCCGAT                                                                           <  SRR4302532.2807676/94‑1 (MQ=60)
                     GTCCGGGCTTGGCAGCAGGGAACCGTAGAAGCCGGTTGCCTGTGCTTTAGACAGTTCGCTCACCGCATCCACACCGTTAATGCCAATGCCGATG                                                                          >  SRR4302532.6045786/1‑94 (MQ=60)
                       CCGGGCTTGGCAGCAGGGAACCGTAGAAGCCGGTTGCCTGTGCTTTAGACAGTTCGCTCACCGCATCCACACCGTTAATGCCAATGCCGATGAT                                                                        >  SRR4302532.4317983/1‑94 (MQ=60)
                        CGGGCTTGGCAGCAGGGAACCGTAGAAGCCGGTTGCCTGTGCTTTAGACAGTTCGCTCACCGCATCCACGCCGTTAATGCCAATGCCGATGATA                                                                       >  SRR4302532.4072319/1‑94 (MQ=60)
                         GGGCTTGGCAGCAGGGAACCGTAGAAGCCGGTTGCCTGTGCTTTAGACAGTTCGCTCACCGCATCCACACCGTTAATGCCAATGCCGATGATAT                                                                      >  SRR4302532.107724/1‑94 (MQ=60)
                          GGCTTGGCAGCAGGGAACCGTAGAAGCCGGTTGCCTGTGCTTTAGACAGTTCGCTCACCGCATCCACGCCGTTAATGCCAATGCCGATGATATC                                                                     >  SRR4302532.5885725/1‑94 (MQ=60)
                          GGCTTGGCAGCAGGGAACCGTAGAAGCCGGTTGCCTGTGCTTTAGACAGTTCGCTCACCGCATCCACACCGTTAATGCCAATGCCGATGATATC                                                                     <  SRR4302532.4248275/94‑1 (MQ=60)
                           GCTTGGCAGCAGGGAACCGTAGAAGCCGGTTGCCTGTGCTTTAGACAGTTCGCTCACCGCATCCACGCCGTTAATGCCAATGCCGATGATATCG                                                                    <  SRR4302532.5914203/94‑1 (MQ=60)
                            CTTGGCAGCAGGGAACCGTAGAAGCCGGTTGCCTGTGCTTTAGACAGTTCGCTCACCGCATCCACACCGTTAATGCCAATGCCGATGATATCGG                                                                   >  SRR4302532.5822550/1‑94 (MQ=60)
                             TGGGCAGCAGGGAACCGTAGAAGCCGGTTGCCTGTGCTTTAGACAGTTCGCTCACCGCATCCACGCCGTTAATGCCAATGCCGATGATATCGGC                                                                  <  SRR4302532.24938/94‑1 (MQ=60)
                              TGGCAGCAGGGAACCGTAGAAGCCGGTTGCCTGTGCTTTAGACAGTTCGCTCACCGCATCCACGCCGTTAATGCCAATGCCGATGATATCGGCC                                                                 <  SRR4302532.6096380/94‑1 (MQ=60)
                              TGGCAGCAGGGAACCGTAGAAGCCGGTTGCCTGTGCTTTAGACAGTTCGCTCACCGCATCCACACCGTTAATGCCAATGCCGATGATATCGGCC                                                                 <  SRR4302532.4455238/94‑1 (MQ=60)
                               GGCAGCAGGGAACCGTAGAAGCCGGTTGCCTGTGCTTTAGACAGTTCGCTCACCGCATCCACGCCGTTAATGCCAATGCCGATGATATCGGCCG                                                                >  SRR4302532.2010296/1‑94 (MQ=60)
                                 CAGCAGGGAACCGTAGAAGCCGGTTGCCTGTGCTTTAGACAGTTCGCTCACCGCATCCACACCGTTAATGCCAATGCCGATGATATCGGCCGCT                                                              <  SRR4302532.2465195/94‑1 (MQ=60)
                                     AGGGAACCGTAGAAGCCGGTTGCCTGTGCTTTAGACAGTTCGCTCACCGCATCCACGCCGTTAATGCCAATGCCGATGATATCGGCCGCTTTAA                                                          >  SRR4302532.4343283/1‑94 (MQ=60)
                                     AGGGAACCGTAGAAGCCGGTTGCCTGTGCTTTAGACAGTTCGCTCACCGCATCCACACCGTTAATGCCAATTCCGATGATATCGGCCGCTTTAA                                                          >  SRR4302532.2983211/1‑94 (MQ=60)
                                     AGGGAACCGTAGAAGCCGGTTGCCTGTGCTTTAGACAGTTCGCTCACCGCATCCACACCGTTAATGCCAATGCCGATGATATCGGCCGCTTTAA                                                          >  SRR4302532.3657489/1‑94 (MQ=60)
                                      GGGAACCGTAGAAGCCGGTTGCCTGTGCTTTAGACAGTTCGCTCACCGCATCCACGCCGTTAATGCCAATGCCGATGATATCGGCCGCTTTAAA                                                         <  SRR4302532.506148/94‑1 (MQ=60)
                                       cggacggtgtgactctgttttcttttttgtagttatttccccacCCGCACCCACACCGTTAATGCCAAGGCCGATGATATCGGCCGCTTTAAAG                                                        <  SRR4302532.3840449/50‑1 (MQ=60)
                                       GGAACCGTAGAAGCCGGTTGCCTGTGCTTTAGACAGTTCGCTCACCGCATCCACGCCGTTAATGCCAATGCCGATGATATCGGCCGCTTTAAAG                                                        <  SRR4302532.1799864/94‑1 (MQ=60)
                                        GAACCGTAGAAGCCGGTTGCCTGTGCTTTAGACAGTTCGCTCACCGCATCCACGCCGTTAATGCCAATGCCGATGATATCGGCCGCTTTAAAGC                                                       <  SRR4302532.4946197/94‑1 (MQ=60)
                                          acgttaaAAGCCGGTTGCCTGTCCTTTAGACAGTTCGCTCACCGCATCCACGCCGTTCACGCCAATGCCGATGATATCGGCCGCTTTAACGCCC                                                     <  SRR4302532.597217/87‑1 (MQ=60)
                                           CCTTAGAAGCCGGTTCCCTGTGCTTTAGTCAGTTCGCTCGCCGCATCCACGCCGTTAATGCCAATGCCGATGATATCGGCCGCTTTAAAGCCCT                                                    <  SRR4302532.1793456/94‑1 (MQ=60)
                                            CGTAGAAGCCGGTTGCCTGTGCTTTAGACAGTTCGCTCACCGCATCCACGCCGTTAATGCCAATGCCGATGATATCGGCCGCTTTAAAGCCCTG                                                   <  SRR4302532.5988422/94‑1 (MQ=60)
                                            CGTAGAAGCCGGTTGCCTGTGCTTTAGACAGTTCGCTCACCGCATCCACGCCGTTAATGCCAATGCCGATGATATCGGCCGCTTTAAAGCCCTG                                                   >  SRR4302532.4673910/1‑94 (MQ=60)
                                            CGTAGAAGCCGGTTGCCTGTGCTTTAGACAGTTCGCTCACCGCATCCACGCCGTTAATGCCAATGCCGATGATATCGGCCGCTTTAAAGCCCTG                                                   >  SRR4302532.655209/1‑94 (MQ=60)
                                            CGTAGAAGCCGGTTGCCTGTGCTTTAGACAGTTCGATCACCGCATCCACACCGTTAATGCCAATGCCGATGATATCCGCCGCTTTAAAGCtctt                                                   >  SRR4302532.4376654/1‑90 (MQ=60)
                                             GTAGAAGCCGGTTGCCTGTGCTTTAGACAGTTCGCTCACCGCATCCACGCCGTTAATGCCAATGCCGATGATATCGGCCGCTTTAAAGCCCTGC                                                  >  SRR4302532.5006859/1‑94 (MQ=60)
                                             GTAGAAGCCGGTTGCCTGTGCTTTAGACAGTTCGCTCACCGCATCCACACCGTTAATGCCAATGCCGATGATATCGGCCGCTTTAAAGCCCTGA                                                  <  SRR4302532.5749266/94‑1 (MQ=60)
                                              GAGAAGCCGGTTGCCTGTGCTTTAGACAGTTCGCTCACCGCATCCACACCGTTAATGCCAATGCCGATGATATCGGCCGCTTTAAAGCCCTGAC                                                 <  SRR4302532.1741086/94‑1 (MQ=60)
                                                    CCGGTTGCCTGTGCTTTAGACAGTTCGCTCACCGCATCCACGCCGTTAATGCCAATGCCGATGATATCGGCCGCTTTAAAGCCCTGACCTcgcg                                           >  SRR4302532.4852200/1‑90 (MQ=60)
                                                    CCGGTTGCCTGTGCTTTAGACAGTTCGCTCACCGCATCCACGCCGTTAATGCCAATGCCGATGATATCGGCCGCTTTAAAGCCCTGACCTTCAG                                           >  SRR4302532.4852201/1‑94 (MQ=60)
                                                    CCGGTTGCCTGTGCTTTAGACAGTTCGCTCACCGCATCCACACCGTTAATGCCAATGCCGATGATATCGGCCGCTTTAAAGCCCTGACCTTCCG                                           <  SRR4302532.384782/94‑1 (MQ=60)
                                                     CGGTTGCCTGTGCTTTAGACAGTTCGCTCACCGCATCCACGCCGTTAATGCCAATGCCGATGATATCGGCCGCTTTAAAGCCCTGACCTTCCGT                                          <  SRR4302532.4985918/94‑1 (MQ=60)
                                                     CGGTTGCCTGTGCTTTAGACAGTTCGCTCACCGCATCCACACCGTTAATGCCAATGCCGATGATATCGGCCGCTTTAAAGCCCTGACCTTCCGT                                          >  SRR4302532.1816623/1‑94 (MQ=60)
                                                      GGTTGCCTGTGCTTTAGACAGTTCGCTCACCGCATCCACGCCGTTAATGCCAATGCCGATGATATCGGCCGCTTTAAAGCCCTGACCTTCCGTC                                         >  SRR4302532.5583301/1‑94 (MQ=60)
                                                      GGTTGCCTGTGCTTTAGACAGTTCGCTCACCGCATCCACACCGTTAATGCCAATGCCGATGATATCGGCCGCTTTAAAGCCCTGACCTTCCGTC                                         >  SRR4302532.1326440/1‑94 (MQ=60)
                                                       GTTGCCTGTGCTTTAGACAGTTCGCTCACCGCATCCACGCCGTTAATGCCAATGCCGATGATATCGGCCGCTTTAAAGCCCTGACCTTCCGTCG                                        >  SRR4302532.640023/1‑94 (MQ=60)
                                                          GCCTGTGCTTTAGACAGTTCGCTCACCGCATCCACACCGTTAATGCCAATGCCGATGATATCGGCCGCTTTAAAGCCCTGACCTTCCGTCGCGC                                     >  SRR4302532.2838939/1‑94 (MQ=60)
                                                              TTGCTTTAGACAGTTCGCTCACCGCATCCACGCCGTTAATGCCAATGCCGATGATATCGGCCGCTTTAAAGCCCTGACCTTCCGTCGCGCGTAC                                 <  SRR4302532.2664826/94‑1 (MQ=60)
                                                              GTGCTTTAGACAGTTCGCTCACCGCATCCACGCCGTTAATGCCAATGCCGATGATATCGGCCGCTTTAAAGCCCTGACCTTCCGTCGCGCGTAC                                 <  SRR4302532.1974054/94‑1 (MQ=60)
                                                               TGCTTTAGACAGTTCGCTCACCGCATCCACGCCGTTAATGCCAATGCCGATGATATCGGCCGCTTTAAAGCCCTGACCTTCCGTCGCGCGTACG                                >  SRR4302532.4306678/1‑94 (MQ=60)
                                                               TGCTTTAGACAGTTCGCTCACCGCATCCACGCCGTTAATGCCAATGCCGATGATATCGGCCGCTTTAAAGCCCTGACCTTCCGTCGCGCGTACG                                <  SRR4302532.5760465/94‑1 (MQ=60)
                                                                 CTTTAGACAGTTCGCTCACCGCATCCACGCCGTTAATGCCAATGCCGATGATATCGGCCGCTTTAAAGCCCTGACCTTCCGTCGCGCGTACGCC                              <  SRR4302532.2119413/94‑1 (MQ=60)
                                                                   TTAGACAGTTCGCTCACCGCATCCACGCCGTTAATGCCAATGCCGATGATATCGGCCGCTTTAAAGCCCTGACCTTCCGTCGCGCGTACGCCGC                            >  SRR4302532.2126020/1‑94 (MQ=60)
                                                                     AGACAGTTCGCTCACCGCATCCACGCCGATAATGCCAATGCCGATGATATCGGCCGCTTTAAAGCCCTGACCTTCCGTCGCGCGTACGCCGCCC                          <  SRR4302532.5040854/94‑1 (MQ=60)
                                                                     AGACAGTTCGCTCACCGCATCCACACCGTTAATGCCAATGCCGATGATATCGGCCGCTTTAAAGCCCTGACCTTCCGTCGCGCGTACGCCGCCC                          >  SRR4302532.3374907/1‑94 (MQ=60)
                                                                      GCCAGTTCGCTCACCGCATCCACGCCGTTAATGCCAATGCCGATGATATCGGCCGCTTTAAAGCCCTGACCTTCCGTCGCGCGTACGCCGCCCA                         <  SRR4302532.4471773/94‑1 (MQ=60)
                                                                       ACATTTCGCTCACCGCATCCACGCCGTTAATGCCAATGCCGATGATATCGGCCGCTTTAAAGCCCTGACCTTCCGTCGCGCGTACGCCGCCCAG                        <  SRR4302532.5245446/94‑1 (MQ=60)
                                                                       ACAGTTCGCTCACCGCATCCACGCCGTTAATGCCAATGCCGATGATATCGGCCGCTTTAAAGCCCTGACCTTCCGTCGCGCGTACGCCGCCCAG                        >  SRR4302532.5706299/1‑94 (MQ=60)
                                                                        CAGTTCGCTCACCGCATCCACGCCGTTAATGCCAATGCCGATGATATCGGCCGCTTTAAAGCCCTGACCTTCCGTCGCGCGTACGCCGCCCAGC                       >  SRR4302532.6254977/1‑94 (MQ=60)
                                                                         AGTTCGCTCACCGCATCCACACCGTTAATGCCAATGCCGATGATATCGGCCGCTTTAAAGCCCTGACCTTCCGTCGCGCGTACGCCGCCCAGCC                      >  SRR4302532.2218700/1‑94 (MQ=60)
                                                                          GTTCGCTCCCCTCATCCACACCGTTAATGCCAATGCCGATGATAGCGGCCGCTTTAAAGCCCTGACCTTCCGTCGCGCGTACGCCGCCCAGCAC                     <  SRR4302532.2720012/94‑1 (MQ=60)
                                                                          GTTCGCTCACCGCATCCACACCGTTAATGCCAATGCCGATGATATCGGCCGCTTTAAAGCCCTGACCTTCCGTCGCGCGTACGCCGCCCAGCAC                     <  SRR4302532.2720013/94‑1 (MQ=60)
                                                                           TTCGCTCACCGCATCCACGCCGTTAATGCCAATGCCGATGATATCGGCCGCTTTAAAGCCCTGACCTTCCGTCGCGCGTACGCCGCCCAGCACG                    <  SRR4302532.2963133/94‑1 (MQ=60)
                                                                             CGCTCACCGCATCCACACCGTTAATGCCAATGCCGATGATATCGGCCGCTTTAAAGCCCTGACCTTCCGTCGCGCGTACGCCGCCCAGCACGGT                  <  SRR4302532.5236759/94‑1 (MQ=60)
                                                                             CGCTCACCGCACCCACACCGTTAATGCCAATGCCGATGATATCGGCCGCTTTAAAGCCCTGACCTTCCGTCGCGCGTACGCCGCCCAGCACGGT                  >  SRR4302532.1048084/1‑94 (MQ=60)
                                                                              GCTCACCGCATCCACACCGTTAATGCCAATGCCGATGATATCGGCCGCTTTAAAGCCCTGACCTTCCGTCGCGCGTACGCCGCCCAGCACGGTG                 >  SRR4302532.6298563/1‑94 (MQ=60)
                                                                               CTCACCTCATCCACACCGTTAATGCCAATGCCGATGATATCGGTCGCTTTAAAGTCCTGACCTTCCGTCGTGCGTACGTCGTCCAGCACGGTGC                >  SRR4302532.2337717/1‑94 (MQ=60)
                                                                               CTCACCGCATCCACGCCGTTAATGCCAATGCCGATGATATCGGCCGCTTTAAAGCCCTGACCTTCCGTCGCGCGTACGCCGCCCAGCACGGTGC                >  SRR4302532.1157697/1‑94 (MQ=60)
                                                                               CTCACCGCATCCACACCGTTAATGCCAATGCCGATGATATCGGCCGCTTTAAAGCCCTGACCTTCCGTCGCGCGTACGCCGCCCAGCACGGTGC                >  SRR4302532.2965043/1‑94 (MQ=60)
                                                                               CTCACCGCATCCACACCGTTAATGCCAATGCCGATGATATCGGCCGCTTTAAAGCCCTGACCTTCCGTCGCGCGTACGCCGCCCAGCACGGTGC                >  SRR4302532.436768/1‑94 (MQ=60)
                                                                                TCACCGCATCCACACCGTTAATGCCAATGCCGATGATATCGGCCGCTTTAAAGCCCTGACCTTCCGTCGCGCGTACGCCGCCCAGCACGGTGCT               <  SRR4302532.2420534/94‑1 (MQ=60)
                                                                                 CACCGCATCCACGCCGTTAATGCCAATGCCGATGATATCGGCCGCTTTAAAGCCCTGACCTTCCGTCGCGCGTACGCCGCCCAGCACGATGCTG              >  SRR4302532.2129712/1‑94 (MQ=60)
                                                                                 CACCGCATCCACACCGTTAATGCCAATGCCGATGATATCGGCCGCTTTAAAGCCCTGACCTTCCGTCGCGCGTACGCCGCCCAGCACGGTGCTG              >  SRR4302532.3178726/1‑94 (MQ=60)
                                                                                  ACCGCATCCACGCCGTTAATGCCAATGCCGATGATATCGGCCGCTTTAAAGCCCTGACCTTCCGTCGCGCGTACGCCGCCCAGCACGGTGCTGT             <  SRR4302532.2732431/94‑1 (MQ=60)
                                                                                   CCGCATCCACACCGTTAATGCCAATGCCGATGATATCGGCCGCTTTAAAGCCCTGACCTTCCGTCGCGCGTACGCCGCCCAGCACGGTGCTGTC            >  SRR4302532.3574579/1‑94 (MQ=60)
                                                                                    CGCATCCACGCCGTTAAAGCCAATGCCGATGATATCGGCCGCTTTAAAGCCCTGACCTTCCGTCGCGCGTACGCCGCCCAGCACGGTGCTGTCG           >  SRR4302532.6060520/1‑94 (MQ=60)
                                                                                    CGCATCCACACCGTTAATGCCAATGCCGATGATATCGGCCGCTTTAAAGCCCTGACCTTCCGTCGCGCGTACGCCGCCCAGCACGGTGCTGTCG           >  SRR4302532.5471128/1‑94 (MQ=60)
                                                                                      CATCCACGCCGTTAATGCCAATGCCGATGATATCGGCCGCTTTAAAGCCCTGACCTTCCGTCGCGCGTACGCCGCCCAGCACGGTGCTGTCGTT         <  SRR4302532.2163850/94‑1 (MQ=60)
                                                                                       ATCCACACCGTTAATGCCAATGCCGATGATATCGGCCGCTTTAAAGCCCTGACCTTCCGTCGCGCGTACGCCGCCCAGCACGGTGCTGTCGTTC        <  SRR4302532.5241988/94‑1 (MQ=60)
                                                                                         CCACACCGTTAATGCCAATGCCGATGATATCGGCCGCTTTAAAGCCCTGACCTTCCGTCGCGCGTACGCCGCCCAGCACGGTGCTGTCGatcgt      >  SRR4302532.3192161/1‑89 (MQ=60)
                                                                                          CACGCCGTTAATGCCAATGCCGATGATATCGGCCGCTTTAAAGCCCTGACCTTCCGTCGCGCGTACGCCGCCCAGCACGGTGCTGTCGTTCATA     <  SRR4302532.2418486/94‑1 (MQ=60)
                                                                                          CACGCCGTTAATGCCAATGCCGATGATATCGGCCGCTTTAAAGCCCTGACCTTCCGTCGCGCGTACGCCGCCCAGCACGGTGCTGTCGTTCATA     <  SRR4302532.4545640/94‑1 (MQ=60)
                                                                                           ACACCGTTAATGCCAATGCCGATGATATCGGCCGCTTTAAAGCCCTGACCTTCCGTTGCGCGTAAGCCGCCCAGCACGGTGCTTTCGTTCATAC    >  SRR4302532.4240381/1‑94 (MQ=60)
                                                                                            CGCCGTTAATGCCAATGCCGATGATATCGGCCGCTTTAAAGCCCTGACCTTCCGTCGCGCGTACGCCGCCCAGCACGGTGCTGTCGTTCATACC   <  SRR4302532.5593565/94‑1 (MQ=60)
                                                                                             GCCGTTAATGCCAATGCCGATGATATCGGCCGCTTTAAAGCCCTGACCTTCCGTCGCGCGTACGCCGCCCAGCACGGTGCTGTCGTTCATACCG  <  SRR4302532.4676375/94‑1 (MQ=60)
                                                                                             GCCGTTAATGCCAATGCCGATGATATCGGCCGCTTTAAAGCCCTGACCTTCCGTCGCGCGTACGCCGCCCAGCACGGTGCTGTCGTTCATACCG  >  SRR4302532.3049876/1‑94 (MQ=60)
                                                                                             |                                                                                             
GCTGGATTTATAGCCATGTACGTCCGGGCTTGGCAGCAGGGAACCGTAGAAGCCGGTTGCCTGTGCTTTAGACAGTTCGCTCACCGCATCCACACCGTTAATGCCAATGCCGATGATATCGGCCGCTTTAAAGCCCTGACCTTCCGTCGCGCGTACGCCGCCCAGCACGGTGCTGTCGTTCATACCG  >  NC_000913/1983291‑1983477

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑