Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 521 238.2 12299412 96.0% 11807435 93.0

Breseq alignment

N/A

GATK/CNVnator alignment

BRESEQ :: bam2aln output
CGGATTGTATTGAGATCCTGCCAGGCTGTATGCCCAAAGTGCTGGGCTGGGTGACAGAGAAAATCCGCCAACCGCTGATTGCCGGTGGGCTGGTGTGCGATGAAGAAGATGCGCGTAATGCGATTAACGCGGGTGTCGTGGCGCTTTCCACCACGAATACCGGGGTCTGGACGTTAGCGAAAAAAT  >  NC_000913/2892601‑2892786
                                                                                             |                                                                                            
CGGATTGTATTGAGATCCTGCCAGGCTGTATGCCCAAAGTGCTGGGCTGGGTGACAGAGAAAATCCGCCAACCGCTGATTGCCGGTGGGCTGGC                                                                                              >  SRR4302532.5467341/1‑94 (MQ=60)
 GGATTGTATTGAGATCCTGCCAGGCTGTATGCCCAAAGTGCTGGGCTGGGTGACAGAGAAAATCCGCCAACCGCTGATTGCCGGTGGGCTGGCG                                                                                             >  SRR4302532.5550640/1‑94 (MQ=60)
  GATTGTATTGAGATCCTGCCAGGCTGTATGCCCAAAGTGCTGGGCTGGGTGACAGAGAAAATCCGCCACCCGCTGATTGCCGGTGGGCTGGCGT                                                                                            >  SRR4302532.193079/1‑94 (MQ=60)
   ATTGTATTGAGATCCTGCCAGGCTGTATGCCCAAAGTGCTGGGCTGGGTGACAGAGAAAATCCGCCAACCGCTGATTGCCGGTGGGCTGGTGTG                                                                                           <  SRR4302532.2217115/94‑1 (MQ=60)
   ATTGTATTGAGATCCTGCCAGGCAGTATGCCCAAAGTGCTGGGCTGGGTGACAGAGAAAATCCGCCAACCGCTGATTGCCGGTGGGCTGGCGTG                                                                                           <  SRR4302532.4442949/94‑1 (MQ=60)
    TTGTATTGAGATCCTGCCAGGCTGTATGCCCAAAGTGCTGGGCTGGGTGACAGAGAAAATCCGCCAACCGCTGATTGCCGGTGGGCTGGTGTGC                                                                                          >  SRR4302532.6067889/1‑94 (MQ=60)
    TTGTATTGAGATCCTGCCAGGCTGTATGCCCAAAGTGCTGGGCTGGGTGACAGAGAAAATCCGCCAACCGCTGATTGCCGGTGGGCTGGCGTGC                                                                                          <  SRR4302532.1289154/94‑1 (MQ=60)
     TGTATTGAGATCCTGCCAGGCTGTATGCCCAAAGTGCTGGGCTGGGTGACAGAGAAAATCCGCCAACCGCTGATTGCCGGTGGGCTGGCGTGCG                                                                                         <  SRR4302532.1907002/94‑1 (MQ=60)
      GTATTGAGATCCTGCCAGGCTGTATGCCCAAAGTGCTGGGCTGGGTGACAGAGAAAATCCGCCAACCGCTGATTGCCGGTGGGCTGGCGTGCGA                                                                                        <  SRR4302532.3281208/94‑1 (MQ=60)
      GTATTGAGATCCTGCCAGGCTGTATGCCCAAAGTGCTGGGCTGGGTGACAGAGAAAATCCGCCAACCGCTGATTGCCGGTGGGCTGGCGTGCGA                                                                                        <  SRR4302532.1765719/94‑1 (MQ=60)
       TATTGAGATCCTGCCAGGCTGTATGCCCAAAGTGCTGGGCTGGGTGACAGAGAAAATCCGCCAACCGCTGATTGCCGGTGGGCTGGCGTGCGAT                                                                                       <  SRR4302532.5171613/94‑1 (MQ=60)
       TATTGAGATCCTGCCAGGCTGTATGCCCAAAGTGCTGGGCTGGGTGACAGAGAAAATCCGCCAACCGCTGATTGCCGGTGGGCTGGCGTGCGAT                                                                                       >  SRR4302532.491413/1‑94 (MQ=60)
          TGAGATCCTGCCAGGCTGTATGCCCAAAGTGCTGGGCTGGGTGACAGAGAAAATCCGCCAACCGCTGATTGCCGGTGGGCTGGTGTGCGATGAA                                                                                    <  SRR4302532.4523218/94‑1 (MQ=60)
          TGAGATCCTGCCAGGCTGTATGCCCAAAGTGCTGGGCTGGGTGACAGAGAAAATCCGCCAACCGCTGATTGCCGGTGGGCTGGCGTGCGATGAA                                                                                    <  SRR4302532.1814430/94‑1 (MQ=60)
           GAGATCCTGCCAGGCTGTATGCCCAAAGTGCTGGGCTGGGTGACAGAGAAAATCCGCCAACCGCTGATTGCCGGTGGGCTGGTGTGCGATGAAG                                                                                   <  SRR4302532.4368570/94‑1 (MQ=60)
           GAGATCCTGCCAGGCTGTATGCCCAAAGTGCTGGGCTGGGTGACAGAGAAAATCCGCCAACCGCTGATTGCCGGTGGGCTGGCGTGCGATGAAG                                                                                   <  SRR4302532.2644144/94‑1 (MQ=60)
             GATCCTGCCAGGCTGTATGCCCAAAGTGCTGGGCTGGGTGACAGAGAAAATCCGCCAACCGCTGATTGCCGGTGGGCTGGCGTGCGATGAAGAA                                                                                 <  SRR4302532.132125/94‑1 (MQ=60)
              ATCCTGCCAGGCTGTATGCCCAAAGTGCTGGGCTGGGTGACAGAGAAAATCCGCCAACCGCTGATTGCCGGTGGGCTGGTGTGCGATGAAGAAG                                                                                <  SRR4302532.2975873/94‑1 (MQ=60)
               TCCTGCCAGGCTGTATGCCCAAAGTGCTGGGCTGGGTGACAGAGAAAATCCGCCAACCGCTGATTGCCGGTGGGCTGGTGTGCGATGAAGAAGA                                                                               >  SRR4302532.4483992/1‑94 (MQ=60)
               TCCTGCCAGGCTGTATGCCCAAAGTGCTGGGCTGGGTGACAGAGAAAATCCGCCAACCGCTGATTGCCGGTGGGCTGGTGTGCGATGAAGAAGA                                                                               <  SRR4302532.5065989/94‑1 (MQ=60)
               TCCTGCCAGGCTGTATGCCCAAAGTGCTGGGCTGGGTGACAGAGAAAATCCGCCAACCGCTGATTGCCGGTGGGCTGGCGTGCGATGAAGAAGA                                                                               <  SRR4302532.5037673/94‑1 (MQ=60)
                CCTGCCAGGCTGTATGCCCAAAGTGCTGGGCTGGGTGACAGAGAAAATCCGCCAACCGCTGATTGCCGGTGGGCTGGCGTGCGATGAAGAAGAT                                                                              >  SRR4302532.1654321/1‑94 (MQ=60)
                 CTGCCAGGCTGTATGCCCAAAGTGCTGGGCTGGGTGACAGAGAAAATCCGCCAACCGCTGATTGCCGGTGGGCTGGCGTGCGATGAAGAAGATG                                                                             >  SRR4302532.3145022/1‑94 (MQ=60)
                 CTGCCAGGCTGTATGCCCAAAGTGCTGGGCTGGGTGACAGAGAAAATCCGCCAACCGCTGATTGCCGGTGGGCTGGCGTGCGATGAAGAAGATG                                                                             >  SRR4302532.4803563/1‑94 (MQ=60)
                   GCCAGGCTGTATGCCCAAAGTGCTGGGCTGGGTGACAGAGAAAATCCGCCAACCGCTGATTGCCGGTGGGCTGGTGTGCGATGAAGAAGATGCG                                                                           >  SRR4302532.3319668/1‑94 (MQ=60)
                   GCCAGGCTGTATGCCCAAAGTGCTGGGCTGGGTGACAGAGAAAATCCGCCAACCGCTGATTGCCGGTGGGCTGGCGTGCGATGAAGAAGATGCG                                                                           <  SRR4302532.2609084/94‑1 (MQ=60)
                    CCAGGCTGTATGCCCAAAGTGCTGGGCTGGGTGACAGAGAAAATCCGCCAACCGCTGATTGCCGGTGGGCTGGTGTGCGATGAAGAAGATGCGC                                                                          >  SRR4302532.3680477/1‑94 (MQ=60)
                    CCAGGCTGTATGCCCAAAGTGCTGGGCTGGGTGACAGAGAAAATCCGCCAACCGCTGATTGCCGGTGGGCTGGCGTGCGATGAAGAAGATGCGC                                                                          <  SRR4302532.3864073/94‑1 (MQ=60)
                    CCAGGCTGTATGCCCAAAGTGCTGGGCTGGGTGACAGAGAAAATCCGCCAACCGCTGATTGCCGGTGGGCTGGCGTGCGATGAAGAAGATGCGC                                                                          >  SRR4302532.2638114/1‑94 (MQ=60)
                    CCAGGCTGTATGCCCAAAGTGCTGGGCTGGGTGACAGAGAAAATCCGCCAACCGCTGATTGCCGGTGGGCTGGCGTGCGATGAAGAAGATGCGC                                                                          <  SRR4302532.114110/94‑1 (MQ=60)
                     CAGGCTGTATGCCCAAAGTGCTGGGCTGGGTGACAGAGAAAATCCGCCAACCGCTGATTGCCGGTGGGCTGGTGTGCGATGAAGAAGATGCGCG                                                                         >  SRR4302532.4797578/1‑94 (MQ=60)
                       GGCTGTATGCCCAAAGTGCTGGGCTGGGTGACAGAGAAAATCCGCCAACCGCTGATTGCCGGTGGGCTGGCGTGCGATGAAGAAGATGCGCGTA                                                                       >  SRR4302532.1250603/1‑94 (MQ=60)
                       GGCTGTATGCCCAAAGTGCTGGGCTGGGTGACAGAGAAAATCCGCCAACCGCTGATTGCCGGTGGGCTGGCGTGCGATGAAGAAGATGCGCGTA                                                                       >  SRR4302532.3449645/1‑94 (MQ=60)
                         CTGTATGCCCAAAGTGCTGGGCTGGGTGACAGAGAAAATCCGCCAACCGCTGATTGCCGGTGGGCTGGCGTGCGATGAAGAAGATGCGCGTAAT                                                                     >  SRR4302532.2165739/1‑94 (MQ=60)
                         CTGTATGCCCAAAGTGCTGGGCTGGGTGACAGAGAAAATCCGCCAACCGCTGATTGCCGGTGGGCTGGCGTGCGATGAAGAAGATGCGCGTAAT                                                                     >  SRR4302532.877638/1‑94 (MQ=60)
                         CTGTATGCCCAAAGTGCTGGGCTGGGTGACAGAGAAAATCCGCCAACCGCTGATTGCCGGTGGGCTGGCGTGCGATGAAGAAGATGCGCGTAAT                                                                     >  SRR4302532.4069140/1‑94 (MQ=60)
                          TGTATGCCCAAAGTGCTGGGCTGGGTGACAGAGAAAATCCGCCAACCGCTGATTGCCGGTGGGCTGGCGTGCGATGAAGAAGATGCGCGTAATG                                                                    >  SRR4302532.4472963/1‑94 (MQ=60)
                           GTATGCCCAAAGTGCTGGGCTGGGTGACAGAGAAAATCCGCCAACCGCTGATTGCCGGTGGGCTGGTGTGCGATGAAGAAGATGCGCGTAATGC                                                                   <  SRR4302532.3979404/94‑1 (MQ=60)
                           GTATGCCCAAAGTGCTGGGCTGGGTGACAGAGAAAATCCGCCAACCGCTGATTGCCGGTGGGCTGGCGTGCGATGAAGAAGATGCGCGTAATGC                                                                   <  SRR4302532.5039507/94‑1 (MQ=60)
                            TATGCCCAAAGTGCTGGGCTGGGTGACAGAGAAAATCCGCCAACCGCTGATTGCCGGTGGGCTGGCGTGCGATGAAGAAGATGCGCGTAATGCG                                                                  <  SRR4302532.5385592/94‑1 (MQ=60)
                            TATGCCCAAAGTGCTGGGCTGGGTGACAGAGAAAATCCGCCAACCGCTGATTGCCGGTGGGCTGGCGTGCGATGAAGAAGATGCGCGTAATGCG                                                                  <  SRR4302532.846225/94‑1 (MQ=60)
                             ATGCCCAAAGTGCTGGGCTGGGTGACAGAGAAAATCCGCCAACCGCTGATTGCCGGTGGGCTGGTGTGCGATGAAGAAGATGCGCGTAATGCGA                                                                 >  SRR4302532.4024685/1‑94 (MQ=60)
                             ATGCCCAAAGTGCTGGGCTGGGTGACAGAGAAAATCCGCCAACCGCTGATTGCCGGTGGGCTGGTGTGCGATGAAGAAGATGCGCGTAATGCGA                                                                 >  SRR4302532.3840200/1‑94 (MQ=60)
                             ATGCCCAAAGTGCTGGGCTGGGTGACAGAGAAAATCCGCCAACCGCTGATTGCCGGTGGGCTGGCGTGCGATCAAGAAGATGCGCGTAATGCGA                                                                 <  SRR4302532.6139146/94‑1 (MQ=60)
                              TGCCCAAAGTGCTGGGCTGGGTGTCAGAGAAAATCCGCCAACCGCTGATTGCCGGTGGGCTGGTGTGCGATGAAGAAGATGCGCGTAATGCGAT                                                                <  SRR4302532.4644497/94‑1 (MQ=60)
                               GCCCAAAGTGCTGGGCTGGGTGACAGAGAAAATCCGCCAACCGCTGATTGCCGGTGGGCTGGCGTGCGATGAAGAAGATGCGCGTAATGCGATT                                                               >  SRR4302532.1453431/1‑94 (MQ=60)
                                CCCAAAGTGCTGGGCTGGGTGACAGAGAAAATCCGCCAACCGCTGATTGCCGGTGGGCTGGTGTGCGATGAAGAAGATGCGCGTAATGCGATTA                                                              <  SRR4302532.661816/94‑1 (MQ=60)
                                CCCAAAGTGCTGGGCTGGGTGACAGAGAAAATCCGCCAACCGCTGATTGCCGGTGGGCTGGCGTGCGATGAAGAAGATGCGCGTAATGCGATTA                                                              <  SRR4302532.5190756/94‑1 (MQ=60)
                                  CAAAGTGCTGGGCTGGGTGACAGAGAAAATCCGCCAACCGCTGATTGCCGGTGGGCTGGTGTGCGATGAAGAAGATGCGCGTAATGCGATTAAC                                                            <  SRR4302532.1545170/94‑1 (MQ=60)
                                  CAAAGTGCTGGGCTGGGTGACAGAGAAAATCCGCCAACCGCTGATTGCCGGTGGGCTGGTGTGCGATGAAGAAGATGCGCGTAATGCGATTAAC                                                            >  SRR4302532.2695305/1‑94 (MQ=60)
                                  CAAAGTGCTGGGCTGGGTGACAGAGAAAATCCGCCAACCGCTGATTGCCGGTGGGCTGGCGTGCGATGAAGAAGATGCGCGTAATGCGATTAAC                                                            <  SRR4302532.5157158/94‑1 (MQ=60)
                                  CAAAGTGCTGGGCTGGGTGACAGAGAAAATCCGCCAACCGCTGATTGCCGGTGGGCTGGCGTGCGATGAAGAACATGCGCGTACTGCGATTAAC                                                            >  SRR4302532.1944423/1‑94 (MQ=60)
                                  CAAAGTGCTGGGCTGGGTAACAGAGAAAATCCGCCAACCGCTGATTGCCGGTGGGCTGGTGTGCGATGAAGAAGATGCGCGTAATGCGATTAAC                                                            <  SRR4302532.5861932/94‑1 (MQ=60)
                                   AAAGTGCTGGGCTGGGTGACAGAGAAAATCCGCCAACCGCTGATTGCCGGTGGGCTGGCGTGCGATGAAGAAGATGCGCGTAATGCGATTAACG                                                           >  SRR4302532.956157/1‑94 (MQ=60)
                                    AAGTGCTGGGCTGGGTGACAGAGAAAATCCGCCAACCGCTGATTGCCGGTGGGCTGGTGTGCGATGAAGAAGATGCGCGTAATGCGATTAACGC                                                          >  SRR4302532.150694/1‑94 (MQ=60)
                                    AAGTGCTGGGCTGGGTGACAGAGAAAATCCGCCAACCGCTGATTGCCGGTGGGCTGGCGTGCGATGAAGAAGATGCGCGTAATGCGATTAACGC                                                          <  SRR4302532.198071/94‑1 (MQ=60)
                                     AGTGCTGGGCTGGGTGACAGAGAAAATCCGCCAACCGCTGATTGCCGGTGGGCTGGCGTGCGATGAAGAAGATGCGCGTAATGCGATTAACGCG                                                         <  SRR4302532.2230943/94‑1 (MQ=60)
                                     AGTGCTGGGCTGGGTGACAGAGAAAATCCGCCAACCGCTGATTGCCGGTGGGCTGGCGTGCGATGAAGAAGATGCGCGTAATGCGATTAACGCG                                                         >  SRR4302532.5929509/1‑94 (MQ=60)
                                     AGTGCTGGGCTGGGTGACAGAGAAAATCCGCCAACCGCTGATTGCCGGTGGGCTGGCGTGCGATGAAGAAGATGCGCGTAATGCGATTAACGCG                                                         >  SRR4302532.5968260/1‑94 (MQ=60)
                                      GTGCTGGGCTGGGTGACAGAGAAAATCCGCCAACCGCTGATTGCCGGTGGGCTGGTGTGCGATGAAGAAGATGCGCGTAATGCGATTAACGCGG                                                        >  SRR4302532.4477241/1‑94 (MQ=60)
                                      GTGCTGGGCTGGGTGACAGAGAAAATCCGCCAACCGCTGATTGCCGGTGGGCTGGCGTGCGATGAAGAAGATGCGCGTAATGCGATTAACGCGG                                                        >  SRR4302532.5189736/1‑94 (MQ=60)
                                        GCTGGGCTGGGTGACAGAGAAACTCCGCCACCCGCTGATTGCCGGTGGGCTGGTGTGCGATGAAGAAGATGCGCGTAATGCGATTAACGCGGGT                                                      <  SRR4302532.3126995/94‑1 (MQ=60)
                                        GCTGGGCTGGGTGACAGAGAAAATCCGCCAACCGCTGATTGCCGGTGGGCTGGTGTGCGATGAAGAAGATGCGCGTAATGCGATTAACGCGGGT                                                      <  SRR4302532.6330684/94‑1 (MQ=60)
                                         GTGGGCTGGGTGACAGAGAAAATCCGCCAACCGCTGATTGCCGGTGGGCTGGCGTGCGATGAAGAAGATGCGCGTAATGCGATTAACGCGGGTG                                                     <  SRR4302532.4952657/94‑1 (MQ=60)
                                         CTGGGCTGGGTGACAGAGAAAATCCGCCAACCGCTGATTGCCGGTGGGCTGGCGTGCGATGAAGAAGATGCGCGTAATGCGATTAACGCGGGTG                                                     <  SRR4302532.5561054/94‑1 (MQ=60)
                                             GCTGGGTGACAGAGAAAATCCGCCAACCGCTGATTGCCGGTGGGCTGGCGTGCGATGAAGAAGGTACGCGTAATGCGATTAAGGCGGGGGTCGG                                                 >  SRR4302532.589326/1‑94 (MQ=60)
                                              CTGGGTGACAGAGAAAATCCGCCAACCGCTGATTGCCGGTGGGCTGGTGTGCGATGAAGAAGATGCGCGTAATGCGATTAACGCGGGTGTCGTG                                                <  SRR4302532.5647586/94‑1 (MQ=60)
                                              CTGGGTGACAGAGAAAATCCGCCAACCGCTGATTGCCGGTGGGCTGGCGTGCGATGAAGAAGATGCGCGTAATGCGATTAACGCGGGTGTCGTG                                                >  SRR4302532.1120165/1‑94 (MQ=60)
                                               TGGGTGACAGAGAAAATCCGCCAACCGCTGATTGCCGGTGGGCTGGTGTGCGATGAAGAAGATGCGCGTAATGCGATTAACGCGGGTGTCGTGG                                               <  SRR4302532.4218779/94‑1 (MQ=60)
                                               TGGGTGACAGAGAAAATCCGCCAACCGCTGATTGCCGGTGGGCTGGTGTGCGATGAAGAAGATGCGCGTAATGCGATTAACGCGGGTGTCGTGG                                               >  SRR4302532.6283359/1‑94 (MQ=60)
                                               TGGGTGACAGAGAAAATCCGCCAACCGCTGATTGCCGGTGGGCTGGTGTGCGATGAAGAAGATGCGCGTAATGCGATTAACGCGGGTGTCGCGG                                               >  SRR4302532.2464278/1‑94 (MQ=60)
                                                 GGTGACAGAGAAAATCCGCCAACCGCTGATTGCCGGTGGGCTGGCGTGCGATGAAGAAGATGCGCGTAATGCGATTAACGCGGGTGTCGTGGCG                                             <  SRR4302532.6196763/94‑1 (MQ=60)
                                                 GGTGACAGAGAAAATCCGCCAACCGCTGATTGCCGGTGGGCTGGCGTGCGATGAAGAAGATGCGCGTAATGCGATTAACGCGGGGGTCGTGGCG                                             >  SRR4302532.1925142/1‑94 (MQ=60)
                                                  GTGACAGAGAAAATCCGCCAACCGCTGATTGCCGGTGGGCTGGTGTGCGATGAAGAAGATGCGCGTAATGCGATTAACGCGGGTGTCGTGGCGC                                            >  SRR4302532.6135565/1‑94 (MQ=60)
                                                     ACAGAGAAAATCCGCCAACCGCTGATTGCCGGTGGGCTGGTGTGCGATGAAGAAGATGCGCGTAATGCGATTAACGCGGGTGTCGTGGCGCTTT                                         >  SRR4302532.5141866/1‑94 (MQ=60)
                                                      CAGAGAAAATCCGCCAACCGCTGATTGCCGGTGGGCTGGCGTGCGATGAAGAAGATGCGCGTAATGCGATTAACGCGGGTGTCGTGGCGCTTTC                                        >  SRR4302532.548017/1‑94 (MQ=60)
                                                       AGAGAAAATCCGCCAACCGCTGATTGCCGGTGGGCTGGTGTGCGATGAAGAAGATGCGCGTAATGCGATTAACGCGGGTGTCGTGGCGCTTTCC                                       >  SRR4302532.826254/1‑94 (MQ=60)
                                                       AGAGAAAATCCGCCAACCGCTGATTGCCGGTGGGCTGGCGTGCGATGAAGAAGATGCGCGTAATGCGATTAACGCGGGTGTCGTGGCGCTTTCC                                       >  SRR4302532.3687048/1‑94 (MQ=60)
                                                       AGAGAAAATCCGCCAACCGCTGATTGCCGGTGGGCTGGCGTGCGATGAAGAAGATGCGCGTAATGCGATTAACGCGGGTGTCGTGGCGCTTTCC                                       >  SRR4302532.2917049/1‑94 (MQ=60)
                                                         AGAAAATCCGCCAACCGCTGATTGCCGGTGGGCTGGTGTGCGATGAAGAAGATGCGCGTAATGCGATTAACGCGGGTGTCGTGGCGCTTTCCAC                                     <  SRR4302532.1644281/94‑1 (MQ=60)
                                                           AAAATCCGCCAACCGCTGATTGCCGGTGGGCTGGTGTGCGATGAAGAAGATGCGCGTAATGCGATTAACGCGGGTGTCGTGGCGCTTTCCACCA                                   >  SRR4302532.6105345/1‑94 (MQ=60)
                                                           AAAATCCGCCAACCGCTGATTGCCGGTGGGCTGGCGTGCGATGAAGAAGATGCGCGTAATGCGATTAACGCGGGTGTCGTGGCGCTTTCCACCA                                   <  SRR4302532.5825320/94‑1 (MQ=60)
                                                           AAAATCCGCCAACCGCTGATTGCCGGTGGGCTGGCGTGCGATGAAGAAGATGCGCGTAATGCGATTAACGCGGGTGTCGTGGCGCTTTCCACCA                                   <  SRR4302532.6074366/94‑1 (MQ=60)
                                                             AATCCGCCAACCGCTGATTGCCGGTGGGCTGGCGTGCGATGAAGAAGATGCGCGTAATGCGATTAACGCGGGTGTCGTGGCGCTTTCCACCACG                                 >  SRR4302532.1158805/1‑94 (MQ=60)
                                                                CCGCCAACCGCTGATTGCCGGTGGGCTGGCGTGCGATGAAGAAGATGCGCGTAATGCGATTAACGCGGGTGTCGTGGCGCTTTCCACCACGAAT                              <  SRR4302532.951539/94‑1 (MQ=60)
                                                                CCGCCAAACGCTGATTGCCGGTGGGCTGGCGTGCGATGAAGAAGATGCGCGTAATGCGATTAACGCGGGTGTCGTGGCGCTTTCCACCACGAAT                              <  SRR4302532.1929569/94‑1 (MQ=60)
                                                                 CGCCAACCGCTGATTGCCGGTGGGCTGGCGTGCGATGAAGAAGATGCGCGTAATGCGATTAACGCGGGTGTCGTGGCGCTTTCCACCACGAATA                             <  SRR4302532.3923874/94‑1 (MQ=60)
                                                                  CCCAACCGCTGATTGCCGGTGGGCTGGCGTGCGATGAAGAAGATGCGCGTAATGCGATTAACGCGGGTGTCGTGGCGCTTTCCACCACGAATAC                            <  SRR4302532.5354426/94‑1 (MQ=60)
                                                                   CCAACCGCTGATTGCCGGTGGGCTGGCGTGCGATGAAGAAGATGCGCGTAATGCGATTAACGCGGGTGTCGTGGCGCTTTCCACCACGAATACC                           >  SRR4302532.273781/1‑94 (MQ=60)
                                                                   CCAACCGCTGATTGCCGGTGGGCTGGCGTGCGATGAAGAAGATGCGCGTAATGCGATTAACGCGGGTGTCGTGGCGCTTTCCACCACGAATACC                           <  SRR4302532.87061/94‑1 (MQ=60)
                                                                     AACCGCTGATTGCCGGTGGGCTGGTGTGCGATGAAGAAGATGCGCGTAATGCGATTAACGCGGGTGTCGTGGCGCTTTCCACCACGAATACCGG                         >  SRR4302532.5117537/1‑94 (MQ=60)
                                                                      ACCGCTGATTGCCGGTGGGCTGGTGTGCGATGAAGAAGATGCGCGTAATGCGATTAACGCGGGTGTCGTGGCGCTTTCCACCACGAATACCGGG                        >  SRR4302532.257810/1‑94 (MQ=60)
                                                                      ACCGCTGATTGCCGGTGGGCTGGCGTGCGATGAAGAAGATGCGCGTAATGCGATTAACGCGGGTGTCGTGGCGCTTTCCACCACGAATACCGGG                        >  SRR4302532.98272/1‑94 (MQ=60)
                                                                      ACCGCTGATTGCCGGTGGGCTGGCGTGCGATGAAGAAGATGCGCGTAATGCGATTAACGCGGGTGTCGTGGCGCTTTCCACCACGAATACCGGG                        <  SRR4302532.3351438/94‑1 (MQ=60)
                                                                       CCGCTGATTGCCGGTGGGCTGGTGTGCGATGAAGAAGATGCGCGTAATGCGATTAACGCGGGTGTCGTGGCGCTTTCCACCACGAATACCGGGG                       <  SRR4302532.4715401/94‑1 (MQ=60)
                                                                       CCGCTGATTGCCGGTGGGCTGGTGTGCGATGAAGAAGATGCGCGTAATGCGATTAACGCGGGTGTCGTGGCGCTTTCCACCACGAATACCGGGG                       >  SRR4302532.4660753/1‑94 (MQ=60)
                                                                       CCGCTGATTGCCGGTGGGCTGGCGTGCGATGAAGAAGATGCGCGTAATGCGATTAACGCGGGTGTCGTGGCGCTTTCCACCACGAATACCGGGG                       >  SRR4302532.5135638/1‑94 (MQ=60)
                                                                        CGCTGATTGCCGGTGGGCTGGCGTGCGATGAAGAAGATGCGCGTAATGCGATTAACGCGGGTGTCGTGGCGCTTTCCACCACGAATACCGGGGT                      >  SRR4302532.3988261/1‑94 (MQ=60)
                                                                         GCTGATTGCCGGTGGGCTGGTGTGCGATGAAGAAGATGCGCGTAATGCGATTAACGCGGGTGTCGTGGCGCTTTCCACCACGAATACCGGGGTC                     >  SRR4302532.2766513/1‑94 (MQ=60)
                                                                          CTGATTGCCGGTGGGCTGGCGTGCGATGAAGAAGATGCGCGTAATGCGATTAACGCGGGTGTCGTGGCGCTTTCCACCACGAATACCGGGGTCT                    >  SRR4302532.3639070/1‑94 (MQ=60)
                                                                          CTGATTGCCGGTGGGCTGGCGTGCGATGAAGAAGATGCGCGTAATGCGATTAACGCGGGTGTCGTGGCGCTTTCCACCACGAATACCGGGGTCT                    <  SRR4302532.1542571/94‑1 (MQ=60)
                                                                          CTGATTGCCGGTGGGCTGGCGTGCGATGAAGAAGATGCGCGTAATGCGATTAACGCGGGTGTCGTGGCGCTTTCCACCACGAATACCGGGGTCT                    <  SRR4302532.1542572/94‑1 (MQ=60)
                                                                           TGATTGCCGGTGGGCTGGTGTGCGATGAAGAAGATGCGCGTAATGCGATTAACGCGGGTGTCGTGGGGCTGTCCACCACGAATACCGGGGGCTG                   >  SRR4302532.4638149/1‑94 (MQ=60)
                                                                           TGATTGCCGGTGGGCTGGCGTGCGATGAAGAAGATGCGCGTAATGCGATTAACGCGGGTGTCGTGGCGCTTTCCACCACGAATACCGGGGTCTG                   >  SRR4302532.739861/1‑94 (MQ=60)
                                                                            GATTGCCGGTGGGCTGGTGTGCGATGAAGAAGATGCGCGTAATGCGATTAACGCGGGTGTCGTGGCGCTTTCCACCACGAATACCGGGGTCTGG                  >  SRR4302532.5761785/1‑94 (MQ=60)
                                                                            GATTGCCGGTGGGCTGGTGTGCGATGAAGAAGATGCGCGTAATGCGATTAACGCGGGTGTCGTGGCGCTTTCCACCACGAATACCGGGGTCTGG                  <  SRR4302532.3566664/94‑1 (MQ=60)
                                                                             gtttCCGGTGGGCTGGCGTGCGATGAAGAAGATGCGCGTAATGCGATTAACGCGGGTGTCGTGGCGCTTTCCACCACGAATACCGGGGTCTGGA                 <  SRR4302532.1734424/90‑1 (MQ=60)
                                                                              TTGCCGGTGGGCTGGCGTGCGATGAAGAAGATGCGCGTAATGCGATTAACGCGGGTGTCGTGGCGCTTTCCACCACGAATACCGGGGTCTGGAC                <  SRR4302532.1545913/94‑1 (MQ=60)
                                                                              TTGCCGGTGGGCTGGCGTGCGATGAAGAAGATGCGCGTAATGCGATTAACGCGGGTGTCGTGGCGCTTTCCACCACGAATACCGGGGTCTGGAC                <  SRR4302532.5451691/94‑1 (MQ=60)
                                                                              TTGCCGGTGGGCTGGCGTGCGATGAAGAAGATGCGCGTAATGCGATTAACGCGGGTGTCGTGGCGCTTTCCACCACGAATACCGGGGTCTGGAC                <  SRR4302532.1652265/94‑1 (MQ=60)
                                                                               TGCCGGTGGGCTGGTGTGCGATGAAGAAGATGCGCGTAATGCGATTAACGCGGGTGTCGTGGCGCTTTCCACCACGAATACCGGGGTCTGGACG               <  SRR4302532.2929899/94‑1 (MQ=60)
                                                                                 CCGGTGGGCTGGCGTGCGATGAAGAAGATGCGCGTAATGCGATTAACGCGGGTGTCGTGGCGCTTTCCACCACGAATACCGGGGTCTGGACGTT             >  SRR4302532.2708302/1‑94 (MQ=60)
                                                                                  CGGTGGGCTGGCGTGCGATGAAGAAGATGCGCGTAATGCGATTAACGCGGGTGTCGTGGCGCTTTCCACCACGAATACCGGGGTCTGGACGTTA            >  SRR4302532.1217941/1‑94 (MQ=60)
                                                                                  CGGTGGGCTGGCGTGCGATGAAGAAGATGCGCGTAATGCGATTAACGCGGGTGTCGTGGCGCTTTCCACCACGAATACCGGGGTCTGGACGTTA            <  SRR4302532.596663/94‑1 (MQ=60)
                                                                                   GGTGGGCTGGCGTGCGATGAAGAAGATGCGCGTAATGCGATTAACGCGGGTGTCGTGGCGCTTTCCACCACGAATACCGGGGTCTGGACGTTAG           >  SRR4302532.2743639/1‑94 (MQ=60)
                                                                                    GTGGGCTGGTGTGCGATGAAGAAGATGCGCGTAATGCGATTAACGCGGGTGTCGTGGCGCTTTCCACCACGAATACCGGGGTCTGGACGTTAGC          <  SRR4302532.4774593/94‑1 (MQ=60)
                                                                                     TGGGCTGGTGTGCGATGAAGAAGATGCGCGTAATGCGATTAACGCGGGTGTCGTGGCGCTTTCCACCACGAATACCGGGGTCTGGACGTTAGCG         >  SRR4302532.2217478/1‑94 (MQ=60)
                                                                                     TGGGCTGGCGTGCGATGAAGAAGATGCGCGTAATGCGATTAACGCGGGTGTCGTGGCGCTTTCCACCACGAATACCGGGGTCTGGACGTTAGCG         <  SRR4302532.2991416/94‑1 (MQ=60)
                                                                                     GGGGCTGGCGTGCGATGAAGAAGATGCGCGTAATGCGATTAACGCGGGTGTCGTGGCGCTTTCCACCACGAATACCGGGGTCTGGACGTTAGCG         <  SRR4302532.1600118/94‑1 (MQ=60)
                                                                                      GGGCTGGCGTGCGATGAAGAATATGCGCGTAATGCGATTAACGCGGGTGTCGTGGCGCTTGCCACCACGAATACCGGGGTCTGGACGTTAGCGA        <  SRR4302532.3641993/94‑1 (MQ=60)
                                                                                       GGCTGGCGTGCGATGAAGAAGATGCGCGTAATGCGATTAACGCGGGTGTCGTGGCGCTTTCCACCACGAATACCGGGGTCTGGACGTTAGCGAA       >  SRR4302532.2215085/1‑94 (MQ=60)
                                                                                       GGCTGGCGTGCGATGAAGAAGATGCGCGTAATGCGATTAACGCGGGTGTCGTGGCGCTTTCCACCACGAATACCGGGGTCTGGACGTTAGCGAA       <  SRR4302532.3729038/94‑1 (MQ=60)
                                                                                       GGCTGGCGTGCGATGAAGAAGATGCGCGTAATGCGATTAACGCGGGTGTCGTGGCGCTTTCCACCACGAATACCGGGGTCTGGACGTTAGCGAA       <  SRR4302532.4728260/94‑1 (MQ=60)
                                                                                        GCTGGTGTGCGATGAAGAAGATGCGCGTAATGCGATTAACGCGGGTGTCGTGGCGCTTTCCACCACGAATACCGGGGTCTGGACGTTAGCGAAA      >  SRR4302532.638798/1‑94 (MQ=60)
                                                                                         CTGGTGTGCGATGAAGAAGATGCGCGTAATGCGATTAACGCGGGTGTCGTGGCGCTTTCCACCACGAATACCGGGGTCTGGACGTTAGCGAAAA     >  SRR4302532.922590/1‑94 (MQ=60)
                                                                                          TGGTGTGCGATGAAGAAGATGCGCGTAATGCGATTAACGCGGGTGTCGTGGCGCTTTCCACCACGAATACCGGGGTCTGGACGTTAGCGAAAAA    >  SRR4302532.2478161/1‑94 (MQ=60)
                                                                                          TGGTGTGCGATGAAGAAGATGCGCGTAATGCGATTAACGCGGGTGTCGTGGCGCTTTCCACCACGAATACCGGGGTCTGGACGTTAGCGAAAAA    >  SRR4302532.1407887/1‑94 (MQ=60)
                                                                                          TGGCGTGCGATGAAGAAGATGCGCGTAATGCGATTAACGCGGGTGTCGTGGCGCTTTCCACCACGAATACCGGGGTCTGGACGTTAGCGAAAAA    >  SRR4302532.4045968/1‑94 (MQ=60)
                                                                                           GTTGTGCGATGAAGAAGATGCGCGTAATGCGATTAACGCGGGTGTCGTGGCGCTTTCCCCCACGAATACCGGGGTCTGGACGTTAGCGAAAAAA   <  SRR4302532.3864418/94‑1 (MQ=60)
                                                                                           GGTGTGCGATGAAGAAGATGCGCGTAATGCGATTAACGCGGGTGTCGTGGCGCTTTCCACCACGAATACCGGGGTCTGGACGTTAGCGAAAAAA   <  SRR4302532.3287123/94‑1 (MQ=60)
                                                                                           GGTGTGCGATGAAGAAGATGCGCGTAATGCGATTAACGCGGGTGTCGTGGCGCTTTCCACCACGAATACCGGGGTCTGGACGTTAGCGAAAAAA   <  SRR4302532.3864419/94‑1 (MQ=60)
                                                                                            GCGTGCGATGAAGAAGATGCGCGTAATGCGATTAACGCGGGTGTCGTGGCGCTTTCCACCACGAATACCGGGGTCTGGACGTTAGCGAAAAAAT  <  SRR4302532.3188234/94‑1 (MQ=60)
                                                                                             |                                                                                            
CGGATTGTATTGAGATCCTGCCAGGCTGTATGCCCAAAGTGCTGGGCTGGGTGACAGAGAAAATCCGCCAACCGCTGATTGCCGGTGGGCTGGTGTGCGATGAAGAAGATGCGCGTAATGCGATTAACGCGGGTGTCGTGGCGCTTTCCACCACGAATACCGGGGTCTGGACGTTAGCGAAAAAAT  >  NC_000913/2892601‑2892786

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 10 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑