Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I1 R1	521	238.2	12299412	96.0%	11807435	93.0

Breseq alignment

N/A

GATK/CNVnator alignment

BRESEQ :: bam2aln output

CGCGACGGAACATTGAAAGGTTATAGTCTGGATGTTCTGTCTAACACCGGCGCTTATGCATCTCACGGGCACTCCATCGCTTCTGC‑‑GGGG‑GGG‑AATAAAGTCGCTTACCTTTATCCTCGTTGTGCCTACGCTTACAGTTCAAAGACCTGCTATACCAACCTCCCCTCGGCTGGTGCGATGCGTGGT  >  NC_000913/2999234‑2999419

CGCGACGGAACATTGAAAGGTTATAGTCTGGATGTTCTGTCTAACACCGGCGCTTATGCATCTCACGGGCACTCCATCGCTTCTGC‑‑GGGG‑GGG‑A                                                                                              >  SRR4302532.1197098/1‑94 (MQ=60)

  CGACGGAACATTGAAAGGTTATAGTCTGGATGTTCTGTCTAACACCGGCGCTTATGCATCTCACGGGCACTCCATCGCTTCTGC‑‑GGGG‑GGGgaa                                                                                             >  SRR4302532.5067697/1‑91 (MQ=60)

  CGACGGAACATTGAAAGGTTATAGTCTGGATGTTCTGTCTAACACCGGCGCTTATGCATCTCACGGGCACTCCATCGCTTCTGC‑‑GGGG‑GGGgaa                                                                                             >  SRR4302532.2199226/1‑91 (MQ=60)

  CGACGGAACATTGAAAGGTTATAGTCTGGATGTTCTGTCTAACACCGGCGCTTATGCATCTCACGGGCACTCCATCGCTTCTGC‑‑GGGG‑GGGgaa                                                                                             <  SRR4302532.1472308/94‑4 (MQ=60)

  CGACGGAACATTGAAAGGTTATAGTCTGGATGTTCTGTCTAACACCGGCGCTTATGCATCTCACGGGCACTCCATCGCTTCTGC‑‑GGGG‑GGG‑AAT                                                                                            >  SRR4302532.93203/1‑94 (MQ=60)

   GACGGAACATTGAAAGGTTATAGTCTGGATGTTCTGTCTAACACCGGCGCTTATGCATCTCACGGGCACTCCATCGCTTCTTC‑‑GGGG‑GGG‑AATA                                                                                           >  SRR4302532.5446542/1‑94 (MQ=60)

   GACGGAACATTGAAAGGTTATAGTCTGGATGTTCTGTCTAACACCGGCGCTTATGCATCTCACGGGCACTCCATCGCTTCTGC‑‑GGGG‑GGG‑AATA                                                                                           >  SRR4302532.819274/1‑94 (MQ=60)

    ACGGAACATTGAAAGGTTATAGTCTGGATGTTCTGTCTAACACCGGCGCTTATGCATCTCACGGGCACTCCATCGCTTCTGCG‑GGGG‑GGG‑AATA                                                                                           >  SRR4302532.584735/1‑94 (MQ=60)

     CGGAACATTGAAAGGTTATAGTCTGGATGTTCTGTCTAACACCGGCGCTTATGCATCTCACGGGCACTCCATCGCTTCTGC‑‑GGGG‑GGGggataa                                                                                          >  SRR4302532.6031775/1‑88 (MQ=60)

      GGAACATTGAAAGGTTATAGTCTGGATGTTCTGTCTAACACCGGCGCTTATGCATCTCACGGGCACTCCATCGCTTCTGC‑‑GGGG‑GGG‑AATAAAG                                                                                        <  SRR4302532.5054150/94‑1 (MQ=60)

      GGAACATTGAAAGGTTATAGTCTGGATGTTCTGTCTAACACCGGCGCTTATGCATCTCACGGGCACTCCATCGCTTCTGC‑‑GGGG‑GGG‑AATAAAG                                                                                        >  SRR4302532.5187955/1‑94 (MQ=60)

        AACATTGAAAGGTTATAGTCTGGATGTTCTGTCTAACACCGGCGCTTATGCATCTCACGGGCACTCCATCGCTTCTGCG‑GGGG‑GGG‑AATAAAGT                                                                                       >  SRR4302532.2995945/1‑94 (MQ=60)

         ACATTGAAAGGTTATAGTCTGGATGTTCTGTCTAACACCGGCGCTTATGCATCTCACGGGCACTCCATCGCTTCTGC‑‑GGGG‑GGG‑AATAAAGTCG                                                                                     >  SRR4302532.5998143/1‑94 (MQ=60)

          CATTGAAAGGTTATAGTCTGGATGTTCTGTCTAACACCGGCGCTTATGCATCTCACGGGCACTCCATCGCTTCTGC‑‑GGGG‑GGG‑AATAAAGTCGC                                                                                    >  SRR4302532.1256633/1‑94 (MQ=60)

            aagaacGGTTATAGTCTGGATGTTCTGTCTAACACCGGCGCTTATGCATCCCACGGGCACTCCATCGCTTCTGCG‑GGGG‑GGG‑AATAAAGTCGCT                                                                                   <  SRR4302532.4345478/88‑1 (MQ=60)

            TTGAAAGGTTATAGTCTGGATGTTCTGTCTAACACCGGCGCTTATGCATCTCACGGGCACTCCATCGCTTCTGCG‑GGGG‑GGG‑AATAAAGTCGCT                                                                                   >  SRR4302532.6222586/1‑94 (MQ=60)

            TTGAAAGGTTATAGTCTGGATGTTCTGTCTAACACCGGCGCTTATGCATCTCACGGGCACTCCATCGCTTCTGC‑‑GGGG‑GGG‑AATAAAGTCGCTT                                                                                  >  SRR4302532.1414862/1‑94 (MQ=60)

             TGAAAGGTTATAGTCTGGATGTTCTGTCTAACACCGGCGCTTATGCATCTCACGGGCACTCCATCGCTTCTGCG‑GGGG‑GGG‑AATAAAGTCGCTT                                                                                  <  SRR4302532.203759/94‑1 (MQ=60)

              GAAAGGTTATAGTCTGGATGTTCTGTCTAACACCGGCGCTTATGCATCTCACGGGCACTCCATCGCTTCTGC‑‑GGGG‑GGG‑AATAAAGTCGCTTAC                                                                                >  SRR4302532.1897360/1‑94 (MQ=60)

               AAAGGTTATAGTCTGGATGTTCTGTCTAACACCGGCGCTTATGCATCTCACGGGCACTCCATCGCTTCTGCG‑GGGG‑GGG‑AATAAAGTCGCTTAC                                                                                <  SRR4302532.727411/94‑1 (MQ=60)

                AAGGTTATAGTCTGGATGTTCTGTCTAACACCGGCGCTTATGCATCTCACGGGCACTCCATCGCTTCTGCG‑GGGG‑GGG‑AATAAAGTCGCTTACC                                                                               <  SRR4302532.2098847/94‑1 (MQ=60)

                 AGGTTATAGTCTGGATGTTCTGTCTAACACCGGCGCTTATGCATCTCACGGGCACTCCATCGCTTCTGCG‑GGGG‑GGG‑AATAAAGTCGCTTACCT                                                                              <  SRR4302532.4978901/94‑1 (MQ=60)

                  GGTTATAGTCTGGATGTTCTGTCTAACACCGGCGCTTATGCATCTCACGGGCACTCCATCGCTTCTGCG‑GGGG‑GGG‑AATAAAGGCGCTTACCTT                                                                             >  SRR4302532.143511/1‑94 (MQ=60)

                  GGTTATAGTCTGGATGTTCTGTCTAACACCGGCGCTTATGCATCTCACGGGCACTCCATCGCTTCTGC‑‑GGGG‑GGG‑AATAAAGTCGCTTACCTTT                                                                            <  SRR4302532.1168449/94‑1 (MQ=60)

                   GTTATAGTCTGGATGTTTTGTCTAACACCGGCGCTTAAGCATCTCCCGGGCACTCCATCGCTTCTGCG‑GGGG‑GGG‑AATAAAGTCGCTTACCTTT                                                                            <  SRR4302532.6252470/94‑1 (MQ=60)

                   GTTATAGTCTGGATGTTCTGTCTAACACCGGCGCTTATGCATCTCACGGGCACTCCATCGCTTCTGCG‑GGGG‑GGG‑AATAAAGTCGCTTACCTTT                                                                            <  SRR4302532.5466433/94‑1 (MQ=60)

                     TATAGTCTGGATGTTCTGTCTAACACCGGCGCTTATGCATCTCACGGGCACTCCATCGCTTCTGCG‑GGGG‑GGG‑AATAAAGTCGCTTACCTTTAT                                                                          >  SRR4302532.1544406/1‑94 (MQ=60)

                      ATAGTCTGGATGTTCTGTCTAACACCGGCGCTTATGCATCTCACGGGCACTCCATCGCTTCTGCG‑GGGG‑GGG‑AATAAAGTCGCTTACCTTTATC                                                                         <  SRR4302532.3757052/94‑1 (MQ=60)

                      ATAGTCTGGATGTTCTGTCTAACACCGGCGCTTATGCATCTCACGGGCACTCCATCGCTTCTGCG‑GGGG‑GGG‑AATAAAGTCGCTTACCTTTATC                                                                         >  SRR4302532.1944621/1‑94 (MQ=60)

                        AGTCTGGATGTTCTGTCTAACACCGGCGCTTATGCATCTCACGGGCACTCCATCGCTTCTGCG‑GGGG‑GGG‑AATAAAGTCGCTTACCTTTATCCT                                                                       <  SRR4302532.3909699/94‑1 (MQ=60)

                        AGTCTGGATGTTCTGTCTAACACCGGCGCTTATGCATCTCACGGGCACTCCATCGCTTCTGCG‑GGGG‑GGG‑AATAAAGTCGCTTACCTTTATCCT                                                                       <  SRR4302532.4236213/94‑1 (MQ=60)

                        AGTCTGGATGTTCTGTCTAACACCGGCGCTTATGCATCTCACGGGCACTCCATCGCTTCTGCG‑GGGG‑GGG‑AATAAAGTCGCTTACCTTTATCCT                                                                       >  SRR4302532.1680950/1‑94 (MQ=60)

                        AGTCTGGATGTTCTGTCTAACACCGGCGCTTATGCATCTCACGGGCACTCCATCGCTTCTGCG‑GGGG‑GGG‑AATAAAGTCGCTTACCTTTATCCT                                                                       >  SRR4302532.1595270/1‑94 (MQ=60)

                        AGTCTGGATGTTCTGTCTAACACCGGCGCTTATGCATCTCACGGGCACTCCATCGCTTCTGC‑‑GGGG‑GGG‑AATAAAGTCGCTTACCTTTATCCTC                                                                      <  SRR4302532.1229801/94‑1 (MQ=60)

                        AGTCTGGATGTTCTGTCTAACACCGGCGCTTATGCATCTCACGGGCACTCCATCGCTTCTGC‑‑GGGG‑GGG‑AATAAAGTCGCTTACCTTTATCCTC                                                                      <  SRR4302532.1670305/94‑1 (MQ=60)

                          TCTGGATGTTCTGTCTAACACCGGCGCTTATGCATCTCACGGGCACTCCATCGCTTCTGCG‑GGGG‑GGG‑AATAAAGTCGCTTACCTTTATCCTCG                                                                     >  SRR4302532.4940616/1‑94 (MQ=60)

                          TCTGGATGTTCTGTCTAACACCGGCGCTTATGCATCTCACGGGCACTCCATCGCTTCTGCG‑GGGG‑GGG‑AATAAAGTCGCTTACCTTTATCCTCG                                                                     <  SRR4302532.2302206/94‑1 (MQ=60)

                          TCTGGATGTTCTGTCTAACACCGGCGCTTATGCATCTCACGGGCACTCCATCGCTTCTGC‑‑GGGG‑GGG‑AATAAAGTCGCTTACCTTTATCCTCGT                                                                    <  SRR4302532.505372/94‑1 (MQ=60)

                           CTGGATGTTCTGTCTAACACCGGCGCTTATGCATCTCACGGGCACTCCATCGCTTCTGC‑‑GGGG‑GGG‑AATAAAGTCGCTTACCTTTATCCTCGTT                                                                   >  SRR4302532.6277046/1‑94 (MQ=60)

                           CTGGATGTTCTGTCTAACACCGGCGCTTATGCATCTCACGGGCACTCCATCGCTTCTGC‑‑GGGG‑GGG‑AATAAAGTCGCTTACCTTTATCCTCGTT                                                                   >  SRR4302532.4193004/1‑94 (MQ=60)

                           CTGGATGTTCTGTCTAACACCGGCGCTTATGCATCTCACGGGCACTCCATCGCTTCTGC‑‑GGGG‑GGG‑AATAAAGTCGCTTACCTTTATCCTCGTT                                                                   <  SRR4302532.3280693/94‑1 (MQ=60)

                           CTGGATGTTCTGTCTAACACCGGCGCTTATGCATCTCACGGGCACTCCATCGCTTCTGC‑‑GGGG‑GGG‑AATAAAGTCGCTTACCTTTATCCTCGTT                                                                   <  SRR4302532.471014/94‑1 (MQ=60)

                           CTGGATGTTCTGTCTAACACCGGCGCTTATGCATCTCACAGGCACTCCATCGCTTCTGCG‑GGGG‑GGG‑AATAAAGTCGCTTACCTTTATCCTCGT                                                                    >  SRR4302532.2717718/1‑94 (MQ=60)

                            TGGATGTTCTGTCTAAGACCGGCGCTTATGCATCTCACGGGCGCTCCTTCGCTTCTGC‑‑GGGG‑GGGTAATAAAGTCGCTTACCTTTATCCTCGTT                                                                   <  SRR4302532.1478651/94‑1 (MQ=60)

                            TGGATGTTCTGTCTAACACCGGCGCTTATGCATCTCACGGGCACTCCATCGCTCGTGCG‑GGGG‑GGG‑AATAAAGTCGCTTACCTTTATTCTCGTT                                                                   >  SRR4302532.5340307/1‑94 (MQ=60)

                             GGATGTTCTGTCTAACACCGGCGCTTATGCATCTCACGGGCACTCCATCGCTTCTGCG‑GGGG‑GGG‑AATAAAGTCGCTTACCTTTATCCTCGTTG                                                                  >  SRR4302532.3195799/1‑94 (MQ=60)

                             GGATGTTCTGTCTAACACCGGCGCTTATGCATCTCACGGGCACTCCATCGCTTCTGCG‑GGGG‑GGG‑AATAAAGTCGCTTACCTTTATCCTCGTTG                                                                  >  SRR4302532.2126056/1‑94 (MQ=60)

                               ATGTTCTGTCTAACACCGGCGCTTATGCATCTCACGGGCACTCCATCGCTTCTGCG‑GGGG‑GGG‑AATAAAGTCGCTTACCTTTATCCTCGTTGTG                                                                <  SRR4302532.1731927/94‑1 (MQ=60)

                               ATGTTCTGTCTAACACCGGCGCTTATGCATCTCACGGGCACTCCATCGCTTCTGCG‑GGGG‑GGG‑AATAAAGTCGCTTACCTTTATCCTCGTTGTG                                                                >  SRR4302532.573350/1‑94 (MQ=60)

                                 GTTCTGTCTAACACCGGCGCTTATGCATCTCACGGGCACTCCATCGCTTCTGCG‑GGGG‑GGG‑AATAAAGTCGCTTACCTTTATCCTCGTTGTGCC                                                              >  SRR4302532.4999989/1‑94 (MQ=60)

                                 GTTCTGTCTAACACCGGCGCTTATGCATCTCACGGGCACTCCATCGCTTCTGC‑‑GGGG‑GGG‑AATAAAGTCGCTTACCTTTATCCTCGTTGTGCCT                                                             <  SRR4302532.5379815/94‑1 (MQ=60)

                                 GTTCTGTCTAACACCGGCGCTTATGCATCTCACGGGCACTCCATCGCTTCTGC‑‑GGGG‑GGG‑AATAAAGTCGCTTACCTTTATCCTCGTTGTGCCT                                                             <  SRR4302532.5434357/94‑1 (MQ=60)

                                   TCTGTCTAACACCGGCGCTTATGCATCTCACGGGCACTCCATCGCTTCTGCG‑GGGG‑GGG‑AATAAAGTCGCTTACCTTTATCCTCGTTGTGCCTA                                                            <  SRR4302532.5428495/94‑1 (MQ=60)

                                   TCTGTCTAACACCGGCGCTTATGCATCTCACGGGCACTCCATCGCTTCTGC‑‑GGGG‑GGG‑AATAAAGTCGCTTACCTTTATCCTCGTTGTGCCTAC                                                           >  SRR4302532.539482/1‑94 (MQ=60)

                                    CTGTCTAACACCGGCGCTTATGCATCTCACGGGCACTCCATCGCTTCTGC‑‑GGGG‑GGG‑AATAAAGTCGCTTACCTTTATCCTCGTTGTGGCTACG                                                          >  SRR4302532.5555384/1‑94 (MQ=60)

                                    CTGTCTAACACCGGCGCTTATGCATCTCACGGGCACTCCATCGCTTCTGC‑‑GGGG‑GGG‑AATAAAGTCGCTTACCTTTATCCTCGTTGTGCCTACG                                                          >  SRR4302532.5587345/1‑94 (MQ=60)

                                    CTGTCTAACACCGGCGCTTATGCATCTCACGGGCACTCCATCGCTTCTGC‑‑GGGG‑GGG‑AATAAAGTCGCTTACCTTTATCCTCGTTGTGCCTACG                                                          <  SRR4302532.1137245/94‑1 (MQ=60)

                                     TGTCTAACACCGGCGCTTATGCATCTCACGGGCACTCCATCGCTTCTGCG‑GGGG‑GGG‑AATAAAGTCGCTTACCTTTATCCTCGTTGTGCCTACG                                                          >  SRR4302532.483720/1‑94 (MQ=60)

                                     TGTCTAACACCGGCGCTTATGCATCTCACGGGCACTCCATCGCTTCTGC‑‑GGGG‑GGG‑AATAAAGTCGCTTACCTTTATCCTCGTTGTGCCTACGC                                                         >  SRR4302532.1982431/1‑94 (MQ=60)

                                      GTCTACCACCGGCGCTTATGCATCTCACGGGCACTCCATCGCTTCTGCG‑GGGG‑GGG‑AATAAAGTCGCTTACCTTTATCCTCGTTGTGCCTACGC                                                         <  SRR4302532.2531693/94‑1 (MQ=60)

                                      GTCTAACACCGGCGCTTATGCATCTCACGGGCACTCCATCGCTTCTGC‑‑GGGG‑GGG‑AATAAAGTCGCTTACCTTTATCCTCGTTGTGCCTACGCT                                                        >  SRR4302532.2081346/1‑94 (MQ=60)

                                       TCTAACACCGGCGCTTATGCATCTCACGGGCACTCCATCGCTTCTGCG‑GGGG‑GGG‑AATAAAGTCGCTTACCTTTATCCTCGTTGTGCCTACGCT                                                        <  SRR4302532.3586482/94‑1 (MQ=60)

                                        CTAACACCGGCGCTTATGCATCTCACGGGCACTCCATCGCTTCTGCG‑GGGG‑GGG‑AATAAAGTCGCTTACCTTTATCCTCGTTGTGCCTACGCTT                                                       <  SRR4302532.5186199/94‑1 (MQ=60)

                                        CTAACACCGGCGCTTATGCATCTCACGGGCACTCCATCGCTTCTGC‑‑GGGG‑GGG‑AATAAAGTCGCTTACCTTTATCCTCGTTGTGCCTACGCTTA                                                      >  SRR4302532.3463580/1‑94 (MQ=60)

                                         TAACACCGGCGCTTATGCATCTCACGGGCACTCCATCGCTTCTGC‑‑GGGG‑GGG‑AATAAAGTCGCTTACCTTTATCCTCGTTGTGCCTACGCTTAC                                                     >  SRR4302532.3359253/1‑94 (MQ=60)

                                            CACCGGCGCTTATGCATCTCACGGGCACTCCATCGCTTCTGCG‑GGGG‑GGG‑AATAAAGTCGCTTACCTTTATCCTCGTTGTGCCTACGCTTACAG                                                   <  SRR4302532.590451/94‑1 (MQ=60)

                                            CACCGGCGCTTATGCATCTCACGGGCACTCCATCGCTTCTGCG‑GGGG‑GGG‑AATAAAGTCGCTTACCTTTATCCTCGTTGTGCCTACGCTTACAG                                                   >  SRR4302532.2819881/1‑94 (MQ=60)

                                            CACCGGCGCTTATGCATCTCACGGGCACTCCATCGCTTCTGCG‑GGGG‑GGG‑AATAAAGTCGCTTACCTTTATCCTCGTTGTGCCTACGCTTACAG                                                   <  SRR4302532.3932418/94‑1 (MQ=60)

                                               CGGCGCTTATGCATCTCACGGGCACTCCATCGCTTCTGCG‑GGGG‑GGG‑AATAAAGTCGCTTACCTTTATCCTCGTTGTGCCTACGCTTACAGTTC                                                >  SRR4302532.4091172/1‑94 (MQ=60)

                                                GGCGCTTATGCATCTCACGGGCACTCCATCGCTTCTGCG‑GGGG‑GGG‑AATAAAGTCGCTTACCTTTATCCTCGTTGTGCCTACGCTTACAGTTCA                                               >  SRR4302532.6199119/1‑94 (MQ=60)

                                                GGCGCTTATGCATCTCACGGGCACTCCATCGCTTCTGCG‑GGGG‑GGG‑AATAAAGTCGCTTACCTTTATCCTCGTTGTGCCTACGCTTACAGTTCA                                               >  SRR4302532.650497/1‑94 (MQ=60)

                                                GGCGCTTATGCATCTCACGGGCACTCCATCGCTTCTGCG‑GGGG‑GGG‑AATAAAGTCGCTTACCTTTATCCTCGTTGTGCCTACGCTTACAGTTCA                                               >  SRR4302532.6097385/1‑94 (MQ=60)

                                                GGCGCTTATGCATCTCACGGGCACTCCATCGCTTCTGCG‑GGGG‑GGG‑AATAAAGTCGCTTACCTTTATCCTAGTTGTGCCTACGCTTACAGTTCA                                               <  SRR4302532.362915/94‑1 (MQ=60)

                                                GGCGCTTATGCATCTCACGGGCACTCCATCGCTTCTGC‑‑GGGG‑GGG‑AATAAAGTCGCTTACCTTTATCCTCGTTGTGCCTACGCTTACAGTTCAA                                              <  SRR4302532.1192169/94‑1 (MQ=60)

                                                GGCGCTTATGCATCTCACGGGCACTCCATCGCTTCTGC‑‑GGGG‑GGG‑AATAAAGTCGCTTACCTTTATCCTCGTTGTGCCTACGCTTACAGTTCAA                                              >  SRR4302532.772491/1‑94 (MQ=60)

                                                  CGCTTATGCATCTCACGGGCACTCCATCGCTTCTGCG‑GGGG‑GGG‑AATAAAGTCGCTTACCTTTATCCTCGTTGTGCCTACGCTTACAGTTCAAA                                             >  SRR4302532.4229367/1‑94 (MQ=60)

                                                  CGCTTATGCATCTCACGGGCACTCCATCGCTTCTGCG‑GGGG‑GGG‑AATAAAGTCGCTTACCTTTATCCTCGTTGTGCCTACGCTTACAGTTCAAA                                             <  SRR4302532.6018187/94‑1 (MQ=60)

                                                  CGCTTATGCATCTCACGGGCACTCCATCGCTTCTGC‑‑GGGG‑GGG‑AATAAAGTCGCTTACCTTTATCCTCGTTGTGCCTACGCTTACAGTTCAAAG                                            <  SRR4302532.2900348/94‑1 (MQ=60)

                                                   GCTTATGCATCTCACGGGCACTCCATCGCTTCTGCG‑GGGG‑GGG‑AATAAAGTCGCTTACCTTTATCCTCGTTGTGCCTACGCTTACAGTTCAAAG                                            >  SRR4302532.5358555/1‑94 (MQ=60)

                                                   GCTTATGCATCTCACGGGCACTCCATCGCTTCTGC‑‑GGGG‑GGG‑AATAAAGTCGCTTACCTTTATCCTCGTTGTGCCTACGCTTACAGTTCAAAGA                                           >  SRR4302532.701968/1‑94 (MQ=60)

                                                    CTTATGCATCTCACGGGGACTCCATCGCTTCTGCG‑GGGG‑GGG‑AATAAAGCTGCTTACCTTTATCCTCGTTGTGCCTACGCTgttggttcaaagt                                           >  SRR4302532.1314441/1‑81 (MQ=60)

                                                    CTTATGCATCTCACGGGCACTCCATCGCTTCTGCG‑GGGG‑GGG‑AATAAAGTCGCTTACCTTTATCCTCGTTGTGCCTACGCTTACAGTTCAAAGA                                           >  SRR4302532.2333205/1‑94 (MQ=60)

                                                    CTTATGCATCTCACGGGCACTCCATCGCTTCTGC‑‑GGGG‑GGG‑AATAAAGTCGCTTACCTTTATCCTCGTTGTGCCTACGCTTACAGTTCAAAGAC                                          >  SRR4302532.5086458/1‑94 (MQ=60)

                                                     TTATGCATCTCACGGGCGCTCCATCGCTTCTGCG‑GGGG‑GGG‑AATAAAGTCGCTTACCTTTATCCTCGTTGTGCCTACGCTTACAGTTCAAAGAC                                          <  SRR4302532.4097957/94‑1 (MQ=60)

                                                      TATGCATCTCACGGGCACTCCATCGCTTCTGC‑‑GGGG‑GGG‑AATAAAGTCGCTTACCTTTATCCTCGTTGTGCCTACGCTTACAGTTCAAAGACCT                                        <  SRR4302532.2150823/94‑1 (MQ=60)

                                                      TATGCATCTCACGGGCACTCCATCGCTTCTGC‑‑GGGG‑GGG‑AATAAAGTCGCTTACCTTTATCCTCGTTGTGCCTACGCTTACAGTTCAAAGACCT                                        >  SRR4302532.5947651/1‑94 (MQ=60)

                                                       ATGCATCTCACGGGCACTCCATCGCTTCTGCG‑GGGG‑GGG‑AATAAAGTCGCTTACCTTTATCCTCGTTGTGCCTACGCTTACATTTCAAAGACCT                                        >  SRR4302532.4240560/1‑94 (MQ=60)

                                                       ATGCATCTCACGGGCACTCCATCGCTTCTGCG‑GGGG‑GGG‑AATAAAGTCGCTTACCTTTATCCTCGTTGTGCCTACGCTTACAGTTCAAAGACCT                                        <  SRR4302532.3960656/94‑1 (MQ=60)

                                                       ATGCATCTCACGGGCACTCCATCGCTTCTGC‑‑GGGG‑GGG‑AATAAAGTCGCTTACCTTTATCCTCGTTGTGCCTACGCTTACAGTTCAAAGACCTG                                       >  SRR4302532.4323907/1‑94 (MQ=60)

                                                        TGCATCTCACGGGCACTCCATCGCTTCTGCG‑GGGG‑GGG‑AATAAAGTCGCTTACCTTTATCCTCGTTGTGCCTACGCTTACAGTTCAAAGACCTG                                       >  SRR4302532.4304683/1‑94 (MQ=60)

                                                           ATCTCACGGGCACTCCATCGCTTCTGC‑‑GGGG‑GGG‑AATAAAGTCGCTTACCTTTATCCTCGTTGTGCCTACGCTTACAGTTCAAAGACCTGCTAT                                   >  SRR4302532.4184511/1‑94 (MQ=60)

                                                            TCTCACGGGCACTCCATCGCTTCTGCG‑GGGG‑GGG‑AATAAAGTCGCTTACCTTTATCCTCGTTGTGCCTACGCTTACAGTTCAAAGACCTGCTAT                                   <  SRR4302532.5930443/94‑1 (MQ=60)

                                                             CTCACGGGCACTCCATCGCTTCTGCG‑GGGG‑GGG‑AATAAAGTCGCTTACCTTTATCCTCGTTGTGCCTACGCTTACAGTTCAAAGACCTGCTATA                                  >  SRR4302532.87357/1‑94 (MQ=60)

                                                             CTCACGGGCACTCCATCGCTTCTGCG‑GGGG‑GGG‑AATAAAGTCGCTTACCTTTATCCTCGTTGTGCCTACGCTTACAGTTCAAAGACCTGCTATA                                  >  SRR4302532.87355/1‑94 (MQ=60)

                                                               CACGGGCACTCCATCGCTTCTGCG‑GGGG‑GGG‑AATAAAGTCGCTTACCTTTATCCTCGTTGTGCCTACGCTTACAGTTCAAAGACCTGCTATACC                                <  SRR4302532.5155820/94‑1 (MQ=60)

                                                                CCGGGCACTCCATCGCTTCTGCG‑GGGG‑GGG‑AATAAAGTCGCTTACCTTTATCCTCGTTGTGCCTACGCTTACAGTTCAAAGACCTGCTATACCA                               <  SRR4302532.5574825/94‑1 (MQ=60)

                                                                ACGGGCACTCCATCGCTTCTGCG‑GGGG‑GGG‑AATAAAGTCGCTTACCTTTATCCTCGTTGTGCCTACGCTTACAGTTCAAAGACCTGCTATACCA                               >  SRR4302532.3449063/1‑94 (MQ=60)

                                                                 CGGGCCCTCCATCGCTTCTGC‑‑GGGG‑GGG‑AATAAAGTCGCTTACCTTTATCCTCGTTGTGCCTACGCTTACAGTTCAAAGACCTGCTATACCAAC                             <  SRR4302532.5096107/94‑1 (MQ=60)

                                                                  GGGCACTCCATCGCTTCTGCG‑GGGG‑GGG‑AATAAAGTCGCTTACCTTTATCCTCGTTGTGCCTACGCTTACAGTTCAAAGACCTGCTATACCAAC                             >  SRR4302532.611250/1‑94 (MQ=60)

                                                                  GGGCACTCCATCGCTTCTGC‑‑GGGG‑GGG‑AATAAAGTCGCTTACCTTTATCCTCGTTGTGCCTACGCTTACAGTTCAAAGACCTGCTATACCAACC                            >  SRR4302532.4668547/1‑94 (MQ=60)

                                                                    GCACTCCATCGCTTCTGCG‑GGGG‑GGG‑AATAAAGTCGCTTACCTTTATCCTCGTTGTGCCTACGCTTACAGTTCAAAGACCTGCTcgacaaaact                           >  SRR4302532.696251/1‑84 (MQ=60)

                                                                    GCACTCCATCGCTTCTGCG‑GGGG‑GGG‑AATAAAGTCGCTTACCTTTATCCTCGTTGTGCCTACGCTTACAGTTCAAAGACCTGCTATACCAACCT                           >  SRR4302532.1742704/1‑94 (MQ=60)

                                                                    GCACTCCATCGCTTCTGC‑‑GGGG‑GGG‑AATAAAGTCGCTTACCTTTATCCTCGTTGTGCCTACGCTTACAGTTCAAAGACCTGCTATACCAACCTC                          <  SRR4302532.1580142/94‑1 (MQ=60)

                                                                     CACTCCATCGCTTCTGC‑‑GGGG‑GGG‑AATAAAGTCGCTTACCTTTATCCTCGTTGTGCCTACGCTTACAGTTCAAAGACCTGCTATACCAACCTCC                         >  SRR4302532.554753/1‑94 (MQ=60)

                                                                      ACTCCATCGCTTCTGC‑‑GGGG‑GGG‑AATAAAGTCGCTTACCTTTATCCTCGTTGTGCCTACGCTTACAGTTCAAAGACCTGCTATACCAACCTCCC                        >  SRR4302532.141880/1‑94 (MQ=60)

                                                                      ACTCCATCGCTTCTGC‑‑GGGG‑GGG‑AATAAAGTCGCTTACCTTTATCCTCGTTGTGCCTACGCTTACAGTTCAAAGACCTGCTATACCAACCTCCC                        >  SRR4302532.4908882/1‑94 (MQ=60)

                                                                       CTCCATCGCTTCTGCG‑GGGG‑GGG‑AATAAAGTCGCTTACCTTTATCCTCGTTGTGCCTACGCTTACAGTTCAAAGACCTGCTATACCAACCTCCC                        <  SRR4302532.2253941/94‑1 (MQ=60)

                                                                       CTCCATCGCTTCTGC‑‑GGGG‑GGG‑AATAAAGTCGCTTACCTTTATCCTCGTTGTGCCTACGCTTACAGTTCAAAGACCTGCTATACCAACCTCCCC                       >  SRR4302532.469986/1‑94 (MQ=60)

                                                                       CTCCATCGCTTCTGC‑‑GGGG‑GGG‑AATAAAGTCGCTTACCTTTATCCTCGTTGTGCCTACGCTTACAGTTCAAAGACCTGCTATACCAACCTCCCC                       <  SRR4302532.5796399/94‑1 (MQ=60)

                                                                        TCCATCGCTTCTGC‑‑GGGG‑GGG‑AATAAAGTCGCTTACCTTTATCCTCGTTGTGCCTACGCTTACAGTTCAAAGACCTGCTATACCAACCTCCCCT                      >  SRR4302532.5496792/1‑94 (MQ=60)

                                                                         CCATCGCTTCTGCG‑GGGG‑GGG‑AATAAAGTCGCTTACCTTTATCCTCGTTGTGCCTACGCTTACAGTTCAAAGACCTGCTATACCAACCTCCCCT                      <  SRR4302532.5195/94‑1 (MQ=60)

                                                                          CATCGCTTCTGCG‑GGGG‑GGG‑AATAAAGTCGCTTACCTTTATCCTCGTTGTGCCTACGCTTACAGTTCAAAGACCTGCTATACCAACCTCCCCTC                     <  SRR4302532.2800475/94‑1 (MQ=60)

                                                                          CATCGCTTCTGC‑‑GGGG‑GGG‑AATAAAGTCGCTTACCTTTATCCTCGTTGTGCCTACGCTTACAGTTCAAAGACCTGCTATACCAACCTCCCCTCG                    <  SRR4302532.230773/94‑1 (MQ=60)

                                                                          CATCGCTTCTGC‑‑GGGG‑GGG‑AATAAAGTCGCTTACCTTTATCCTCGTTGTGCCTACGCTTACAGTTCAAAGACCTGCTATACCAACCTCCCCTCG                    <  SRR4302532.4284573/94‑1 (MQ=60)

                                                                           ATCGCTTCTGCG‑GGGG‑GGG‑AATAAAGTCGCTTACCTTTATCCTCGTTGTGCCTACGCTTACAGTTCAAAGACCTGCTATACCAACCTCCCCTCG                    >  SRR4302532.5586598/1‑94 (MQ=60)

                                                                           ATCGCTTCTGC‑‑GGGG‑GGG‑AATAAAGTCGCTTACCTTTATCCTCGTTGTGCCTACGCTTACAGTTCAAAGACCTGCTATACCAACCTCCCCTCGG                   >  SRR4302532.2950041/1‑94 (MQ=60)

                                                                           ATCGCTTATGCG‑GGGG‑GGG‑AATAAAGTCGCTTACCTTTATCCTCGTTGTGCCTACGCTTACAGTTCAAAGACCTGCTATACCAACCTCCCCTCG                    >  SRR4302532.2322942/1‑94 (MQ=60)

                                                                             CGCTTCTGC‑‑GGGG‑GGG‑AATAAAGTCGCTTACCTTTATCCTCGTTGTGCCTACGCTTACAGTTCAAAGACCTGCTATACCAACCTCCCCTCGGCT                 <  SRR4302532.5697098/94‑1 (MQ=60)

                                                                             CGCTTATGC‑‑GGGG‑GGG‑AATAAAGTCGCTTACCTTTATCCTCGTTGTGCCTACGCTTACAGTTCAAAGACCTGCTATACCAACCTCCCCTCGGCT                 <  SRR4302532.5697096/94‑1 (MQ=60)

                                                                                cttcttcgGGGG‑GGG‑AATAAAGTCGCTTACCTTTATCCTCGTTGTGCCTCCGCTTACAGTACAAAGACCTGCTATACCAACCTCCCCTCGGCTG                >  SRR4302532.1109948/9‑94 (MQ=60)

                                                                                TTCTGC‑‑GGGG‑GGG‑AATAAAGTCGCTTACCTTTATCCTCGTTGTGCCTACGCTTACAGTTCAAAGACCTGCTATACCAACCTCCCCTCGGCTGGG              >  SRR4302532.5569215/1‑94 (MQ=60)

                                                                                 TCTGCGGGGGG‑GGG‑AATAAAGTCGCTTACCTTTATCCTCGTTGTGCCTACGCTTACAGTTCAAAGACCTGCTATACCAACCTCCCCTCGGCTGG               <  SRR4302532.1909475/94‑1 (MQ=60)

                                                                                 TCTGCG‑GGGG‑GGG‑AATAAAGTCGCTTACCTTTATCCTCGTTGTGCCTACGCTTACAGTTCAAAGACCTGCTATACCAACCTCCCCTCGGCTGGT              <  SRR4302532.11913/94‑1 (MQ=60)

                                                                                 TCTGC‑‑GGGG‑GGG‑AATAAAGTCGCTTACCTTTATCCTCGTTGTGCCTACGCTTACAGTTCAAAGACCTGCTATACCAACCTCCCCTCGGCTGGTG             <  SRR4302532.1747589/94‑1 (MQ=60)

                                                                                   TGCG‑GGGG‑GGG‑AATAAAGTCGCTTACCTTTATCCTCGTTGTGCCTACGCTTACAGTTCAAAGACCTGCTATACCACCCTCCCCTCGGCTGGTGC            <  SRR4302532.4159562/94‑1 (MQ=60)

                                                                                     C‑‑GGGG‑GGG‑AATAAAGTCGCTTACCTTTATCCTCGTTGTGCCTACGCTTACAGTTCAAAGACCTGCTATACCAACCTCCCCTCGGCTGGTGCGAT         <  SRR4302532.1209458/94‑1 (MQ=60)

                                                                                     C‑‑GGGG‑GGG‑AATAAAGTCGCTTACCTTTATCCTCGTTGTGCCTACGCTTACAGTTCAAAGACCTGCTATACCAACCTCCCCTCGGCTGGTGCGAT         <  SRR4302532.3087242/94‑1 (MQ=60)

                                                                                        GGGGAGGG‑AATAAAGTCGCTTACCTTTATCCTCGTTGTGCCTACGCTTACAGTTCAAAGACCTGCTATACCAACCTCCCCTCGGCTGGTGCGAT         <  SRR4302532.4217725/94‑1 (MQ=60)

                                                                                        GGGG‑GGG‑AATAAAGTCGCTTACCTTTATCCTCGTTGTGCCTACGCTTACAGTTCAAAGACCTGCTATACCAACCTCCCCTCGGCTGGTGCGATG        <  SRR4302532.5418137/94‑1 (MQ=60)

                                                                                        GGGG‑GGG‑AATAAAGTCGCTTACCTTTATCCTCGTTGTGCCTACGCTTACAGTTCAAAGACCTGCTATACCAACCTCCCCTCGGCTGGTGCGATG        <  SRR4302532.5410807/94‑1 (MQ=60)

                                                                                        GGGG‑GGG‑AATAAAGTCGCTTACCTTTATCCTCGTTGTGCCTACGCTTACAGTTCAAAGACCTGCTATACCAACCTCCCCTCGGCTGGTGCGATG        <  SRR4302532.2901583/94‑1 (MQ=60)

                                                                                         GGG‑GGG‑AATAAAGTCGCTTACCTTTATCCTCGTTGTGCCTACGCTTACAGTTCAAAGACCTGCTATACCAACCTCCCCTCGGCTGGTGCGATGC       <  SRR4302532.263191/94‑1 (MQ=60)

                                                                                         GGG‑GGG‑AATAAAGTCGCTTACCTTTATCCTCGTTGTGCCTACGCTTACAGTTCAAAGACCTGCTATACCAACCTCCCCTCGGCTGGTGCGATGC       >  SRR4302532.71520/1‑94 (MQ=60)

                                                                                          GG‑GGG‑AATAAAGTCGCTTACCTTTATCCTCGTTGTGCCTACGCTTACAGTTCAAAGACCTGCTATACCAACCTCCCCTCGGCTGGTGCGATGCG      <  SRR4302532.2979699/94‑1 (MQ=60)

                                                                                          GG‑GGG‑AATAAAGTCGCTTACCTTTATCCTCGTTGTGCCTACGCTTACAGTTCAAAGACCTGCTATACCAACCTCCCCTCGGCTGGTGCGATGCG      >  SRR4302532.785417/1‑94 (MQ=60)

                                                                                          GG‑GGG‑AATAAAGTCGCTTACCTTTATCCTCGTTGTGCCTACGCTTACAGTTCAAAGACCTGCTATACCAACCTCCCCTCGGCTGGTGCGAGGCG      >  SRR4302532.2218544/1‑94 (MQ=60)

                                                                                           G‑GGG‑AATAAAGTCGCTTACCTTTATCCTCGTTGTGCCTACGCTTACAGTTCAAAGACCTGCTATACCAACCTCCCCTCGGCTGGTGCGATGCGT     >  SRR4302532.4758734/1‑94 (MQ=60)

                                                                                           G‑GGG‑AATAAAGTCGCTTACCTTTATCCTCGTTGTGCCTACGCTTACAGTTCAAAGACCTGCTATACCAACCTCCCCTCGGCTGGTGCGATGCGT     <  SRR4302532.5023812/94‑1 (MQ=60)

                                                                                           G‑GGG‑AATAAAGTCGCTTACCTTTATCCTCGTTGTGCCTACGCTTACAGTTCAAAGACCTGCTATACCAACCTCCCCTCGGCTGGTGCGATGCGT     >  SRR4302532.4472642/1‑94 (MQ=60)

                                                                                           G‑GGG‑AATAAAGTCGCTTACCTTTATCCGCGTTGTCCCTACGCTTACAGTTCAAAGACCTGCTATACCAACCTCCCCTCGGCTGGTGCGATGCGT     <  SRR4302532.2045638/94‑1 (MQ=60)

                                                                                              GG‑AATAAAGTCGCTTACCTTTATCCTCGTTGTGCCTACGCTTACAGTTCAAAGACCTGCTATACCAACCTCCCCTCGGCTGGTGCGATGCGTGG   >  SRR4302532.4495755/1‑94 (MQ=60)

                                                                                               G‑AATAAAGTCGCTTACCTTTATCCTCGTTGTGCCTACGCTTACAGTTCAAAGACCTGCTATACCAACCTCCCCTCGGCTGGTGCGATGCGTGGT  >  SRR4302532.1182350/1‑94 (MQ=60)

                                                                                               G‑AATAAAGTCGCTTACCTTTATCCTCGTTGTGCCTACGCTTACAGTTCAAAGACCTGCTATACCAACCTCCCCTCGGCTGGTGCGATGCGTGGT  <  SRR4302532.2447704/94‑1 (MQ=60)

                                                                                               G‑AATAAAGTCGCTTACCTTTATCCTCGTTGTGCCTACGCTTACAGTTCAAAGACCTGCTATACCAACCTCCCCTCGGCTGGTGCGATGCGTGGT  >  SRR4302532.5566930/1‑94 (MQ=60)

                                                                                               G‑AATAAAGTCGCTTACCTTTATCCTCGTTGTGCCTACGCTTACAGTTCAAAGACCTGCTATACCAACCTCCCCTCGGCTGGTGCGATGCGGGGT  >  SRR4302532.1956281/1‑94 (MQ=60)

CGCGACGGAACATTGAAAGGTTATAGTCTGGATGTTCTGTCTAACACCGGCGCTTATGCATCTCACGGGCACTCCATCGCTTCTGC‑‑GGGG‑GGG‑AATAAAGTCGCTTACCTTTATCCTCGTTGTGCCTACGCTTACAGTTCAAAGACCTGCTATACCAACCTCCCCTCGGCTGGTGCGATGCGTGGT  >  NC_000913/2999234‑2999419

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 2 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`