Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 521 238.2 12299412 96.0% 11807435 93.0

Breseq alignment

N/A

GATK/CNVnator alignment

BRESEQ :: bam2aln output
TACCGCATTGGCCCGCACCCAATAATGGTCACCATTTTTGCGGCGATTTTTCACGATGCCGCTCCAGGGCTCCCCTTTTTTCAGGGTGAACCACATATCCGCAAACGCCGCTTTTGGCATATCCGGGTGACGCACCATGTTGTGCGGCTGCCCTTGTAACTCTTGCAAGGTATAGCCGCTCACCTG  >  NC_000913/3216418‑3216603
                                                                                            |                                                                                             
TACCGCATTGGCCCGCACCCAATAATGGTCACCATTTTTGCGGCGATTTTTCACGATGCCGCTCCAGGGCTCCCCTTTTTTCAGGGTGAACCGC                                                                                              <  SRR4302532.3264261/94‑1 (MQ=60)
GACCGCATTGGCCCGCACCCAATAATGGTCACCATTTTTGCGGCGATTTTTCACGATGCCGCTCCAGGGCTCCCCTTTTTTCAGGGTGAACCAC                                                                                              <  SRR4302532.4639413/94‑1 (MQ=60)
  CCGCATTGGCCCGCACCCAATAATGGTCACCATTTTTGCGGCGATTTTTCACGATGCCGCTCCAGGGCTCCCCTTTTTTCAGGGTGAACCGCAT                                                                                            <  SRR4302532.6029112/94‑1 (MQ=60)
  CCGCATTGGCCCGCACCCAATAATGGTCACCATTTTTGCGGCGATTTTTCACGATGCCGCTCCAGGGCTCCCCTTTTTTCAGGGTGAACCGCAT                                                                                            >  SRR4302532.1649513/1‑94 (MQ=60)
  CCGCATTGGCCCGCACCCAATAATGGTCACCATTTTTGCGGCGATTTTTCACGATGCCGCTCCAGGGCTCCCCTTTTTTCAGGGTGAACCACAT                                                                                            <  SRR4302532.5337312/94‑1 (MQ=60)
   CGCATTGGCCCGCACCCAATAATGGTCACCATTTTTGCGGCGATTTTTCGCGATGCCGCTCCAGGGCTCCCCTTTTTTCAGGGTGAACCACATA                                                                                           >  SRR4302532.2660563/1‑94 (MQ=60)
      ATTGGCCCGCACCCAATAATGGTCACCATTTTTGCGGCGATTTTTCACGATGCCGCTCCAGGGCTCCCCTTTTTTCAGGGTGAACCGCATATCC                                                                                        >  SRR4302532.4373012/1‑94 (MQ=60)
      ATTGGCCCGCACCCAATAATGGTAACCATTTTTGCGGCGATTTTTCACGATGCCGCTCCAGGGCTCCCCTTTTTTCAGGGTGAACCGCATATCC                                                                                        <  SRR4302532.3665769/94‑1 (MQ=60)
        TGGCCCGCACCCAATAATGGTCACCATTTTTGCGGCGATTTTTCACGATGCCGCTCCAGGGCTCCCCTTTTTTCAGGGTGAACCGCATATCCGC                                                                                      >  SRR4302532.1822951/1‑94 (MQ=60)
          GCCCGCACCCAATAATGGTCACCATTTTTGCGGCGATTTTTCACGATGCCGCTCCAGGGCTCCCCTTTTTTCAGGGTGAACCACATATCCGCAA                                                                                    <  SRR4302532.2441318/94‑1 (MQ=60)
           CCCGCACCCAATAATGGTCACCATTTTTGCGGCGATTTTTCACGATGCCGCTCCAGGGCTCCCCTTTTTTCAGGGTGAACCGCATATCCGCAAA                                                                                   >  SRR4302532.2768941/1‑94 (MQ=60)
           CCCGCACCCAATAATGGTCACCATTTTTGCGGCGATTTTTCACGATGCCGCTCCAGGGCTCCCCTTTTTTCAGGGTGAACCACATATCCGCAAA                                                                                   >  SRR4302532.5077994/1‑94 (MQ=60)
            CCGCACCCAATAATGGTCACCATTTTTGCGGCGATTTTTCACGATGCCGCTCCAGGGCTCCCCTTTTTTCAGGGTGAACCGCATATCCGCAAAC                                                                                  >  SRR4302532.2178917/1‑94 (MQ=60)
             CGCACCCAATAATGGTCACCATTTTTGCGGCGATTTTTCACGATGCCGCTCCAGGGCTCCCCTTTTTTCAGGGTGAACCGCATATCCGCAAACG                                                                                 >  SRR4302532.1466335/1‑94 (MQ=60)
             CGCACCCAATAATGGTCACCATTTTTGCGGCGATTTTTCACGATGCCGCTCCAGGGCTCCCCTTTTTTCAGGGTGAACCGCATATCCGCAAACG                                                                                 <  SRR4302532.761834/94‑1 (MQ=60)
             CGCACCCAATAATGGTCACCATTTTTGCGGCGATTTTTCACGATGCCGCTCCAGGGCTCCCCTTTTTTCAGGGTGAACCGCATATCCGCAAACG                                                                                 <  SRR4302532.3912117/94‑1 (MQ=60)
             CGCACCCAATAATGGTCACCATTTTTGCGGCGATTTTTCACGATGCCGCTCCAGGGCTCCCCTTTTTTCAGGGTGAACCACATATCCGCAAACG                                                                                 >  SRR4302532.4097154/1‑94 (MQ=60)
               CACCCAATAATGGTCACCATTTTTGCGGCGATTTTTCACGATGCCGCTCCAGGGCTCCCCTTTTTTCAGGGTGAACCGCATATCCGCAAACGCC                                                                               >  SRR4302532.595143/1‑94 (MQ=60)
                ACCCAATAATGGTCACCATTTTTGCGGCGATTTTTCACGATGCCGCTCCAGGGCTCCCCTTTTTTCAGGGTGAACCGCATATCCGCAAACGCCG                                                                              >  SRR4302532.4526984/1‑94 (MQ=60)
                ACCCAATAATGGTCACCATTTTTGCGGCGATTTTTCACGATGCCGCTCCAGGGCTCCCCTTTTTTCAGGGTGAACCGCATATCCGCAAACGCCG                                                                              >  SRR4302532.3759320/1‑94 (MQ=60)
                  CCAATAATGGTCACCATTTTTGCGGCGATTTTTCACGATGCCGCTCCAGGGCTCCCCTTTTTTCAGGGTGAACCACATATCCGCAAACGCCGCT                                                                            <  SRR4302532.3134204/94‑1 (MQ=60)
                   CAATAATGGTCACCATTTTTGCGGCGATTTTTCACGATGCCGCTCCAGGGCTCCCCTTTTTTCAGGGTGAACCACATATCCGCAAACGCCGCTT                                                                           <  SRR4302532.4801849/94‑1 (MQ=60)
                   CAATAATGGTCACCATTTTTGCGGCGATTTTTCACGATGCCGCTCCAGGGCTCCCCTTTTTTCAGGGTGAACCACATATCCGCAAACGCCGCTT                                                                           <  SRR4302532.5315801/94‑1 (MQ=60)
                    AATAATGGTCACCATTTTTGCGGCGATTTTTCACGATGCCGCTCCAGGGCTCCCCTTTTTTCAGGGTGAACCGCATATCCGCAAACGCCGCTTT                                                                          <  SRR4302532.1133882/94‑1 (MQ=60)
                    AATAATGGTCACCATTTTTGCGGCGATTTTTCACGATGCCGCTCCAGGGCTCCCCTTTTTTCAGGGTGAACCGCATATCCGCAAACGCCGCTTT                                                                          >  SRR4302532.2373666/1‑94 (MQ=60)
                    AATAATGGTCACCATTTTTGCGGCGATTTTTCACGATGCCGCTCCAGGGCTCCCCTTTTTTCAGGGTGAACCGCATATCCGCAAACGCCGCTTT                                                                          <  SRR4302532.3785526/94‑1 (MQ=60)
                      TAATGGTCACCATTTTTGCGGCGATTTTTCACGATGCCGCTCCAGGGCTCCCCTTTTTTCAGGGTGAACCACATATCCGCAAACGCCGCTTTTG                                                                        >  SRR4302532.5462980/1‑94 (MQ=60)
                      TAATGGTCACCATTTTTGCGGCGATTTTTCACGATGCCGCTCCAGGGCTCCCCTTTTTTCAGGGTGAACCACATATCCGCAAACGCCGCTTTTG                                                                        <  SRR4302532.2674643/94‑1 (MQ=60)
                          GGTCACCATTTTTGCGGCGATTTTTCACGATGCCGCTCCAGGGCTCCCCTTTTTTCAGGGTGAACCGCATATCCGCAAACGCCGCTTTTGGCAT                                                                    >  SRR4302532.4969918/1‑94 (MQ=60)
                          GGTCACCATTTTTGCGGCGATTTTTCACGATGCCGCTCCAGGGCTCCCCTTTTTTCAGGGTGAACCGCATATCCGCAAACGCCGCTTTTGGCAT                                                                    <  SRR4302532.4246683/94‑1 (MQ=60)
                           GTCACCATTTTTGCGGCGATTTTTCACGATGCCGCTCCAGGGCTCCCCTTTTTTCAGGGTGAACCGCATATCCGCAAACGCCGCTTTTGGCATA                                                                   >  SRR4302532.2270983/1‑94 (MQ=60)
                            TCACCATTTTTGCGGCGATTTTTCACGATGCCGCTCCAGGGCTCCCCTTTTTTCAGGGTGAACCGCATATCCGCAAACGCCGCTTTTGGCATAT                                                                  >  SRR4302532.6260553/1‑94 (MQ=60)
                            TCACCATTTTTGCGGCGATTTTTCACGATGCCGCTCCAGGGCTCCCCTTTTTTCAGGGTGAACCACATATCCGCAAACGCCGCTTTTGGCATAT                                                                  <  SRR4302532.2140325/94‑1 (MQ=60)
                              CCCATTTTTGCGGCGATTTTTCACGATGCCGCTCCAGGGCTCCCCTTTTTTCAGGGTGAACCACATATCCGCAAACGCCGCTTTTGGCATATCC                                                                <  SRR4302532.4449001/94‑1 (MQ=60)
                               CCATTTTTGCGGCGATTTTTCACGATGCCGCTCCAGGGCTCCCCTTTTTTCAGGGTGAACCGCATATCCGCAAACGCCGCTTTTGGCATATCCG                                                               >  SRR4302532.2342934/1‑94 (MQ=60)
                               CCATTTTTGCGGCGATTTTTCACGATGCCGCTCCAGGGCTCCCCTTTTTTCAGGGTGAACCGCATATCCGCAAACGCCGCTTTTGGCATATCCG                                                               <  SRR4302532.5284471/94‑1 (MQ=60)
                               CCATTTTTGCGGCGATTTTTCACGATGCCGCTCCAGGGCTCCCCTTTTTTCAGGGTGAACCGCATATCCGCAAACGCCGCTTTTGGCATATCCG                                                               <  SRR4302532.2246130/94‑1 (MQ=60)
                               CCATTTTTGCGGCGATTTTTCACGATGCCGCTCCAGGGCTCCCCTTTTTTCAGGGTGAACCGCATATCCGCAAACGCCGCTTTTGGCATATCCG                                                               >  SRR4302532.2077997/1‑94 (MQ=60)
                                CATTTTTGCGGCGATTTTTCACGATGCCGCTCCAGGGCTCCCCTTTTTTCAGGGTGAACCGCATATCCGCAAACGCCACTTTTGGCATATCCGG                                                              <  SRR4302532.1665807/94‑1 (MQ=60)
                                CATTTTTGCGGCGATTTTTCACGATGCCGCTCCAGGGCTCCCCTTTTTTCAGGGTGAACCACATATCCGCAAACGCCGCTTTTGGCATATCCGG                                                              <  SRR4302532.1365696/94‑1 (MQ=60)
                                CATTTTTGCGGCGATTTTTCACGATGCCGCTCCAGGGCTCCCCTTTTTTCAGGGTGAACCACATATCCGCAAACGCCGCTTTTGGCATATCCGG                                                              <  SRR4302532.4601495/94‑1 (MQ=60)
                                 ATTTTTGCGGCGATTTTTCACGATGCCGCTCCAGGGCTCCCCTTTTTTCAGGGTGAACCGCATATCCGCAAACGCCGCTTTTGGCATATCCGGG                                                             <  SRR4302532.5791269/94‑1 (MQ=60)
                                  TTTTTGCGGCGATTTTTCACGATGCCGCTCCAGGGCTCCCCTTTTTTCAGGGTGAACCACATATCCGCAAACGCCGCTTTTGcggatatgtggt                                                            <  SRR4302532.1304030/94‑13 (MQ=60)
                                   TTTTGCGGCGATTTTTCACGATGCCGCTCCAGGGCTCCCCTTTTTTCAGGGTGAACCGCATATCCGCAAACGCCGCTTTTGGCATATCCGGGTG                                                           <  SRR4302532.811347/94‑1 (MQ=60)
                                    TTTGCGGCGATTTTTCACGATGCCGCTCCAGGGCTCCCCTTTTTTCAGGGTGAACCGCATATCCGCAAACGCCGCTTTTGGCATATCCGGGTGA                                                          >  SRR4302532.1440894/1‑94 (MQ=60)
                                     TTGCGGCGATTTTTCACGATGCCGCTCCAGGGCTCCCCTTTTTTCAGGGTGAACCACATATCCGCAAACGCCGCTTTTGGCATATCCGGGTGAC                                                         <  SRR4302532.6332931/94‑1 (MQ=60)
                                      TGCGGCGATTTTTCACGATGCCGCTCCAGGGCTCCCCTTTTTTCAGGGTGAACCACATATCCGCAAACGCCGCTTTTGGCATATCCGGGTGACG                                                        >  SRR4302532.2561770/1‑94 (MQ=60)
                                            GATTTTTCACGATGCCGCTCCAGGGCTCCCCTTTTTTCAGGGTGAACCGCATATCCGCAAACGCCGCTTTTGGCATATCCGGGTGACGCACCAT                                                  <  SRR4302532.5809745/94‑1 (MQ=60)
                                            GATTTTTCACGATGCCGCTCCAGGGCTCCCCTTTTTTCAGGGTGAACCACATATCCGCAAACGCCGCTTTTGGCATATCCGGGTGACGCACCAT                                                  <  SRR4302532.1450122/94‑1 (MQ=60)
                                            GATTTTTCACGATGCCGCTCCAGGGCTCCCCTTTTTTCAGGGTGAACCACATATCCGCAAACGCCGCTTTTGGCATATCCGGGTGACGCACCAT                                                  <  SRR4302532.2354706/94‑1 (MQ=60)
                                             ATTTTTCACGATGCCGCTCCAGGGCTCCCCTTTTTTCAGGGTGAACCGCATATCCGCAAACGCCGCTTTTGGCATATCCGGGTGACGCACCATG                                                 >  SRR4302532.1121266/1‑94 (MQ=60)
                                             ATTTTTCACGATGCCGCTCCAGGGCTCCCCTTTTTTCAGGGTGAACCGCATATCCGCAAACGCCGCTTTTGGCATATCCGGGTGACGCACCATG                                                 <  SRR4302532.897339/94‑1 (MQ=60)
                                               TTTTCACGATGCCGCTCCAGGGCTCCCCTTTTTTCAGGGTGAACCACATATCCGCAAACGCCGCTTTTGGCATATCCGGGTGACGCACCATGTT                                               <  SRR4302532.4222490/94‑1 (MQ=60)
                                                   CACGATGCCGCTCCAGGGCTCCCCTTTTTTCAGGGTGAACCTCATATCCGCAAACGCCGCTTTTGGCATATCCGGGTGACGCACCATGTTGTGC                                           <  SRR4302532.1163539/94‑1 (MQ=60)
                                                    ACGATGCCGCTCCAGGGCTCCCCTTTTTTCAGGGTGAACCGCATATCCGCAAACGCCGCTTTTGGCATATCCGGGTGACGCACCATGTTGTGCG                                          <  SRR4302532.2998180/94‑1 (MQ=60)
                                                       ATGCCGCTCCAGGGCTCCCCTTTTTTCAGGGTGAACCGCATATCCGCAAACGCCGCTTTTGGCATATCCGGGTGACGCACCATGTTGTGCGGCT                                       <  SRR4302532.1732401/94‑1 (MQ=60)
                                                       ATGCCGCTCCAGGGCTCCCCTTTTTTCAGGGTGAACCACATATCCGCAAACGCCGCTTTTGGCATATCCGGGTGACGCACCATGTTGTGCGGCT                                       <  SRR4302532.394057/94‑1 (MQ=60)
                                                        TGCCGCTCCAGGGCTCCCCTTTTTTCAGGGTGAACCGCATATCCGCAAACGCCGCTTTTGGCATATCCGGGTGACGCACCATGTTGTGCGGCTG                                      <  SRR4302532.4679236/94‑1 (MQ=60)
                                                             CTCCAGGGCTCCCCTTTTTTCAGGGTGAACCGCATATCCGCAAACGCCGCTTTTGGCATATCCGGGTGACGCACCATGTTGTGCGGCTGCCCTT                                 <  SRR4302532.6025703/94‑1 (MQ=60)
                                                             CTCCAGGGCTCCCCTTTTTTCAGGGTGAACCGCATATCCGCAAACGCCGCTTTTGGCATATCCGGGTGACGCACCATGTTGTGCGGCTGCCCTT                                 >  SRR4302532.5434528/1‑94 (MQ=60)
                                                             CTCCAGGGCTCCCCTTTTTTCAGGGTGAACCACATATCCGCAAACGTCGCTTTTGGCATATCCGGGTGACGCACCATGTTGTGCGGCTGCCCTT                                 >  SRR4302532.5665079/1‑94 (MQ=60)
                                                             CTCCAGGGCTCCCCTTTTTTCAGGGTGAACCACATATCCGCAAACGCCGCTTTTGGCATATCCGGGTGACGCACCATGTTGTGCGGCTGCCCTT                                 >  SRR4302532.5596351/1‑94 (MQ=60)
                                                              TCCAGGGCTCCCCTTTTTTCAGGGTGAACCACATATCCGCAAACGCCGCTTTTGGCATATCCGGGTGACGCACCATGTTGTGCGGCTGCCCTTG                                >  SRR4302532.2039483/1‑94 (MQ=60)
                                                               CCAGGGCTCCCCTTTTTTCAGGGTGAACCGCATATCCGCAAACGCCGCTTTTGGCATATCCGGGTGACGCACCATGTTGTGCGGCTGCCCTTGT                               >  SRR4302532.2497771/1‑94 (MQ=60)
                                                                 AGGGCTCCCCTTTTTTCAGGGTGAACCGCATATCCGCAAACGCCGCTTTTGGCATATCCGGGTGACGCACCATGTTGTGCGGCTGCCCTTGTAA                             >  SRR4302532.6315817/1‑94 (MQ=60)
                                                                 AGGGCTCCCCTTTTTTCAGGGTGAACCACATATCCGCAAACGCCGCTTTTGGCATATCCGGGTGACGCACCATGTTGTGCGGCTGCCCTTGTAA                             >  SRR4302532.4222097/1‑94 (MQ=60)
                                                                  GGGCTCCCCTTTTTTCAGGGTGAATCGCATATCCGCAAACGCCGCCTTTGGCATATCCGGGTGACGCACCATGTTGTGCGGCTGCCCTTGTAAC                            >  SRR4302532.4525621/1‑94 (MQ=60)
                                                                  GGGCTCCCCTTTTTTCAGGGTGAACCGCATATCCGCAAACGCCGCTTTTGGCATATCCGGGTGACGCACCATGTTGTGCGGCTGCCCTTGTAAC                            >  SRR4302532.4525619/1‑94 (MQ=60)
                                                                   GGCTCCCCTTTTTTCAGGGTGAACCACATATCCGCAAACGCCGCTTTTGGCATATCCGGGTGACGCACCATGTTGTGCGGCTGCCCTTGTAACT                           <  SRR4302532.4961357/94‑1 (MQ=60)
                                                                     CTCCCCTTTTTTCAGGGTGAACCACATATCCGCAAACGCCGCTTTTGGCATATCCGGGTGACGCACCATGTTGTGCGGCTGCCCTTGTAACTCT                         <  SRR4302532.2990762/94‑1 (MQ=60)
                                                                     CTCCCCTTTTTTCAGGGTGAACCACATATCCGCAAACGCCGCTTTTGGCATATCCGGGTGACGCACCATGTTGTGCGGCTGCCCTTGTAACTCT                         >  SRR4302532.3083151/1‑94 (MQ=60)
                                                                      TCCCCTTTTTTCAGGGTGAACCACATATCCGCAAACGCCGCTTTTGGCATATCCGGGTGACGCACCATGTTGTGCGGCTGCCCTTGTAACTCTT                        >  SRR4302532.4363821/1‑94 (MQ=60)
                                                                        CCCTTTTTTCAGGGTGAACCACATATCCGCAAACGCCGCTTTTGGCATATCCGGGTGACGCACCATGTTGTGCGGCTGCCCTTGTAACTCTTGC                      >  SRR4302532.3991694/1‑94 (MQ=60)
                                                                         CCTTTTTTCAGGGTGAACCACATATCCGCAAACGCCGCTTTTGGCATATCCGGGTGACGCACCATGTTGTGCGGCTGCCCTTGTAACTCTTGCA                     >  SRR4302532.733898/1‑94 (MQ=60)
                                                                            TTTTTCAGGGTGAACCACATATCCGCAAACGCCGCTTTTGGCATATCCGGGTGACGCACCATGTTGTGCGGCTGCCCTTGTAACTCTTGCAAGG                  <  SRR4302532.4895514/94‑1 (MQ=60)
                                                                             TTTTCAGGGTGAACCACATATCCGCAAACGCCGCTTTTGGCATATCCGGGTGACGCACCATGTTGTGCGGCTGCCCTTGTAACTCTTGCAAGGT                 >  SRR4302532.3062817/1‑94 (MQ=60)
                                                                              TTTCAGGGTGAACCGCATATCCGCAAACGCCGCTTTTGGCATATCCGGGTGACGCACCATGTTGTGCGGCTGCCCTTGTAACTCTTGCAAGGTA                >  SRR4302532.794830/1‑94 (MQ=60)
                                                                              TTTCAGGGTGAACCACATATCCGCAAACGCCGCTTTTGGCATATCCGGGTGACGCACCATGTTGTGCGGCTGCCCTTGTAACTCTTGCAAGGTA                >  SRR4302532.3382056/1‑94 (MQ=60)
                                                                               TTCAGGGTGAACCGCATATCCGCAAACGCCGCTTTTGGCATATCCGGGTGACGCACCATGTTGTGCGGCTGCCCTTGTAACTCTTGCAAGGTAT               >  SRR4302532.4156331/1‑94 (MQ=60)
                                                                               TTCAGGGTGAACCACATATCCGCAAACGCCGCTTTTGGCATATCCGGGTGACGCACCATGTTGTGCGGCTGCCCTTGTAACTCTTGCAAGGTAT               <  SRR4302532.758046/94‑1 (MQ=60)
                                                                                   GGGTGAACCACATATCCGCAAACGCCGCTTTTGGCATATCCGGGTGACGCACCATGTTGTGCGGCTGCCCTTGTAACTCTTGCAAGGTATAGCC           >  SRR4302532.4821865/1‑94 (MQ=60)
                                                                                    GGTGAACCGCATATCCGCAAACGCCGCTTTTGGCATATCCGGGTGACGCACCATGTTGTGCGGCTGTCCTTGTAACTCTTGCAAGGTATAGCCG          >  SRR4302532.4595342/1‑94 (MQ=60)
                                                                                     GTGAACCACATATCCGCAAACGCCGCTTTTGGCATATCCGGGTGACGCACCATGTTGTGCGGCTGCCCTTGTAACTCTTGCAAGGTATAGCCGC         <  SRR4302532.1960218/94‑1 (MQ=60)
                                                                                      TGAACCGCATATCCGCAAACGCCGCTTTTGGCATATCCGGGTGACGCACCATGTTGTGCGGCTGCCCTTGTAACTCTTGCAAGGTATAGCCGCT        <  SRR4302532.6211778/94‑1 (MQ=60)
                                                                                      TGAACCGCATATCCGCAAACGCCGCTTTTGGCATATCCGGGTGACGCACCATGTTGTGCGGCTGCCCTTGTAACTCTTGCAAGGTATAGCCGCT        <  SRR4302532.3272974/94‑1 (MQ=60)
                                                                                         ACCGCATATCCGCAAACGCCGCTTTTGGCATATCCGGGTGACGCACCATGTTGTGCGGCTGCCCTTGTAACTCTTGCAAGGTATAGCCGCTCAC     >  SRR4302532.3014977/1‑94 (MQ=60)
                                                                                           CGCATATCCGCAAACGCCGCTTTTGGCATATCCGGGTGACGCACCATGTTGTGCGGCTGCCCTTGTAACTCTTGCAAGGTATAGCCGCTCACCT   <  SRR4302532.4555505/94‑1 (MQ=60)
                                                                                           CGCATATCCGCAAACGCCGCTTTTGGCATATCCGGGTGACGCACCATGTTGTGCGGCTGCCCTTGTAACTCTTGCAAGGTATAGCCGCTCACCT   >  SRR4302532.165859/1‑94 (MQ=60)
                                                                                           CGCATATCCGCAAACGCCGCTTTTGGCATATCCGGGTGACGCACCATGTTGTGCGGCTGCCCTTGTAACTCTTGCAAGGTATAGCCGCTCACCT   >  SRR4302532.165858/1‑94 (MQ=60)
                                                                                           CACATATCCGCAAACGCCGCTTTTGGCATATCCGGGTGACGCACCATGTTGTGCGGCTGCCCTTGTAACTCTTGCAAGGTATAGCCGCTCACCT   <  SRR4302532.4355453/94‑1 (MQ=60)
                                                                                            ACATATCCGCAAACGCCGCTTTTGGCATATCCGGGTGACGCACCATGTTGTGCGGCTGCCCTTGTAACTCTTGCAAGGTATAGCCGCTCACCTG  <  SRR4302532.2334827/94‑1 (MQ=60)
                                                                                            ACATATCCGCAAACGCCGCTTTTGGCATATCCGGGTGACGCACCATGTTGTGCGGCTGCCCTTGTAACTCTTGCAAGGTATAGCCGCTCACCTG  <  SRR4302532.3214203/94‑1 (MQ=60)
                                                                                            |                                                                                             
TACCGCATTGGCCCGCACCCAATAATGGTCACCATTTTTGCGGCGATTTTTCACGATGCCGCTCCAGGGCTCCCCTTTTTTCAGGGTGAACCACATATCCGCAAACGCCGCTTTTGGCATATCCGGGTGACGCACCATGTTGTGCGGCTGCCCTTGTAACTCTTGCAAGGTATAGCCGCTCACCTG  >  NC_000913/3216418‑3216603

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑