Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 521 238.2 12299412 96.0% 11807435 93.0

Breseq alignment

N/A

GATK/CNVnator alignment

BRESEQ :: bam2aln output
AACGGCGAATACGATCAGGTGGCGTATTACGGTCGTGGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGC‑‑CAAG‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCGTCAGCATGTCCGCTGGACGGCACTGACT  >  NC_000913/3222851‑3223027
                                                                                               |                                                                                     
AACGGCGAATACGATCAGGTGGCGTATTACGGTCGTGGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGC‑‑A                                                                                       <  SRR4302532.2056587/94‑1 (MQ=60)
             ATCAGGTGGCGTATTACGGTCGTGGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑‑‑CCGTCGATGC                                                                        >  SRR4302532.5519167/1‑94 (MQ=60)
             ATCAGGTGGCGTATTACGGTCGTGGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑‑‑CCGTCGATGC                                                                        >  SRR4302532.5577145/1‑94 (MQ=60)
             ATCAGGTGGCGTATTACGGTCGTGGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑‑‑CCGTCGATGC                                                                        >  SRR4302532.4557715/1‑94 (MQ=60)
              TCAGGTGGCGTATTACGGTCGTGGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑‑‑CCGTCGATGCC                                                                       >  SRR4302532.39629/1‑94 (MQ=60)
               CAGGTGTCGTATTACGGTCGTGGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑‑‑CCGTCGATGCCA                                                                      <  SRR4302532.1074731/94‑1 (MQ=60)
               CAGGTGGCGTATTACGGTCGTGGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑‑‑CCGTCGATGCCA                                                                      >  SRR4302532.5145163/1‑94 (MQ=60)
                AGGTGGCGTATTACGGTCGTGGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGTCGCAGCA‑‑‑‑CCGTCGATGCCAT                                                                     <  SRR4302532.4813828/94‑1 (MQ=60)
                AGGTGGCGTATTACGGTCGTGGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑‑‑CCGTCGATGCCAT                                                                     >  SRR4302532.319011/1‑94 (MQ=60)
                AGGTGGCGTATTACGGTCGTGGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑‑‑CCGTCGATGCCAT                                                                     >  SRR4302532.2635912/1‑94 (MQ=60)
                 GGTGGCGTATTACGGTCGTGGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑‑‑CCGTCGATGCCATG                                                                    >  SRR4302532.3001694/1‑94 (MQ=60)
                 GGTGGCGTATTACGGTCGTGGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑‑‑CCGTCGATGCCATG                                                                    <  SRR4302532.4863421/94‑1 (MQ=60)
                 GGTGGCGTATTACGGTCGTGGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑‑‑CCGTCGATGCCATG                                                                    >  SRR4302532.5297100/1‑94 (MQ=60)
                  GTGGCGTATTACGGTCGTGGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑‑‑CCGTCGATGCCATGT                                                                   <  SRR4302532.5637910/94‑1 (MQ=60)
                  GTGGCGTATTACGGTCGTGGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑‑‑CCGTCGATGCCATGT                                                                   <  SRR4302532.6255976/94‑1 (MQ=60)
                   TGGCGTATTACGGTCGTGGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑‑‑CCGTCGATGCCATGTT                                                                  <  SRR4302532.2980786/94‑1 (MQ=60)
                    GGCGTATTGCGGTCGTGGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑‑‑CCGTCGATGCCATGTTC                                                                 <  SRR4302532.476554/94‑1 (MQ=60)
                    GGCGTATTACGGTCGTGGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑‑‑CCGTCGATGCCATGTTC                                                                 >  SRR4302532.6000510/1‑94 (MQ=60)
                    GGCGTATTACGGTCGTGGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑‑‑CCGTCGATGCCATGTTC                                                                 <  SRR4302532.3355837/94‑1 (MQ=60)
                    GGCGTATTACGGTCGTGGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑‑‑CCGTCGATGCCATGTTC                                                                 >  SRR4302532.4118597/1‑94 (MQ=60)
                    GGCGTATTACGGTCGTGGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑‑‑CCGTCGATGCCATGTTC                                                                 <  SRR4302532.2151247/94‑1 (MQ=60)
                    GGCGTATTACGGTCGTGGACCGGGCGAAAACCAAGCCGACAGCCCGCAAGCTAACATCATCTATATCTGGCGCAGCA‑‑‑‑CCGTCGATGCCATGTTC                                                                 >  SRR4302532.1684594/1‑94 (MQ=57)
                      CGTATTACGGTCGTGGACCGGGCGAAACCTACACCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑‑‑CCGTCGATGCCATGTTCGA                                                               <  SRR4302532.2577644/94‑1 (MQ=60)
                       GTATTACGGTCGTGGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑‑‑CCGTCGATGCCATGTTCGAG                                                              <  SRR4302532.3175027/94‑1 (MQ=60)
                       GTATTACGGTCGTGGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑‑‑CCGTCGATGCCATGTTCGAG                                                              >  SRR4302532.49662/1‑94 (MQ=60)
                        TATTACGGTCGTGGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑‑‑CCGTCGATGCCATGTTCGAGA                                                             >  SRR4302532.4166788/1‑94 (MQ=60)
                        TATTACGGTCGTGGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑‑‑CCGTCGATGCCATGTTCGAGA                                                             >  SRR4302532.5633242/1‑94 (MQ=60)
                        TATTACGGTCGTGGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑‑‑CCGTCGATGCCATGTTCGAGA                                                             >  SRR4302532.683191/1‑94 (MQ=60)
                         ATTACGGTCGTGGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑‑‑CCGTCGATGCCATGTTCGAGAA                                                            >  SRR4302532.2155053/1‑94 (MQ=60)
                         ATTACGGTCGTGGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑‑‑CCGTCGATGCCATGTTCGAGAA                                                            >  SRR4302532.3666979/1‑94 (MQ=60)
                          TTACGGTCGTGGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑‑‑CCGTCGATGCCATGTTCGAGAAC                                                           >  SRR4302532.3092144/1‑94 (MQ=60)
                           TACGGTCGTGGACCGGGCGAAACCTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑‑‑CCGTCGATGCCATGTTCGAGAACT                                                          <  SRR4302532.4742787/94‑1 (MQ=60)
                           TACGGTCGTGGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑‑‑CCGTCGATGCCATGTTCGAGAACT                                                          <  SRR4302532.4050434/94‑1 (MQ=60)
                             CGGTCGTGGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑‑‑CCGTCGATGCCATGTTCGAGAACTAT                                                        <  SRR4302532.1158135/94‑1 (MQ=60)
                              GGTCGTGGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑‑‑CCGTCGATGCCATGTTCGAGAACTATC                                                       >  SRR4302532.5342660/1‑94 (MQ=60)
                              GGTCGTGGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑‑‑CCGTCGATGCCATGTTCGAGAACTATC                                                       <  SRR4302532.6195184/94‑1 (MQ=60)
                              GGTCGTGGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑‑‑CCGTCGATGCCATGTTCGAGAACTATC                                                       >  SRR4302532.3068867/1‑94 (MQ=60)
                               GTCGTGGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑‑‑CCGTCGATGCCATGTTCGAGAACTATCC                                                      >  SRR4302532.3112074/1‑94 (MQ=60)
                                tcggtgacaGGGCGACAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑‑‑CCGCCGATGCCATGTTCGAGAACTATCCC                                                     <  SRR4302532.31822/85‑1 (MQ=60)
                                TCGTGGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑‑‑CCGTCGATGCCATGTTCGAGAACTATCCC                                                     >  SRR4302532.555657/1‑94 (MQ=60)
                                TCGTGGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑‑‑CCGTCGATGCCATGTTCGAGAACTATCCC                                                     <  SRR4302532.6026715/94‑1 (MQ=60)
                                 CGTGGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑‑‑CCGTCGATGCCATGTTCGAGAACTATCCCT                                                    <  SRR4302532.6294885/94‑1 (MQ=60)
                                  GTGGACCGGGCGAAAACTACGCCTACAGGCAGCAGGCTAACATCATCCATTTCTGGCGCAGCA‑‑‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTT                                                   <  SRR4302532.4421208/94‑1 (MQ=60)
                                  GTGGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTT                                                   <  SRR4302532.963129/94‑1 (MQ=60)
                                  GTGGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTT                                                   <  SRR4302532.1378730/94‑1 (MQ=60)
                                  GTGGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTT                                                   <  SRR4302532.4852332/94‑1 (MQ=60)
                                  GTGGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTT                                                   >  SRR4302532.6225149/1‑94 (MQ=60)
                                   TGGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTC                                                  >  SRR4302532.5434428/1‑94 (MQ=60)
                                   TGGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTC                                                  <  SRR4302532.6128486/94‑1 (MQ=60)
                                    GGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTCC                                                 <  SRR4302532.113961/94‑1 (MQ=60)
                                    GGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTCC                                                 <  SRR4302532.113962/94‑1 (MQ=60)
                                    GGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTCC                                                 <  SRR4302532.4734130/94‑1 (MQ=60)
                                    GGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTCC                                                 <  SRR4302532.887454/94‑1 (MQ=60)
                                     GACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTCCC                                                >  SRR4302532.4282368/1‑94 (MQ=60)
                                     GACCGGGCGAAAACAACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTCCC                                                <  SRR4302532.2799963/94‑1 (MQ=60)
                                       CCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGC                                              >  SRR4302532.2064762/1‑94 (MQ=60)
                                       CCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑‑‑CCGCCGATGCCATGTTCGTGAACTATACCTTCCCGC                                              >  SRR4302532.3489584/1‑94 (MQ=60)
                                         GGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAG                                            >  SRR4302532.45602/1‑94 (MQ=60)
                                         GGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAG                                            <  SRR4302532.1061097/94‑1 (MQ=60)
                                            CGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAAC                                         >  SRR4302532.3236019/1‑94 (MQ=60)
                                            CGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAAC                                         <  SRR4302532.2084622/94‑1 (MQ=60)
                                              AAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAA                                       <  SRR4302532.1439756/94‑1 (MQ=60)
                                               AAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAAC                                      >  SRR4302532.5592002/1‑94 (MQ=60)
                                               AAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAAC                                      <  SRR4302532.2762234/94‑1 (MQ=60)
                                               AAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAAC                                      <  SRR4302532.4471000/94‑1 (MQ=60)
                                                 ACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGG                                    <  SRR4302532.6083845/94‑1 (MQ=60)
                                                 ACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGG                                    >  SRR4302532.979167/1‑94 (MQ=60)
                                                  CTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGT                                   >  SRR4302532.6326535/1‑94 (MQ=60)
                                                  CTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGT                                   <  SRR4302532.2854711/94‑1 (MQ=60)
                                                   TACCCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTA                                  <  SRR4302532.2450910/94‑1 (MQ=60)
                                                      GCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACC                               >  SRR4302532.2266209/1‑94 (MQ=60)
                                                      CCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACC                               <  SRR4302532.2000504/94‑1 (MQ=60)
                                                       CCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCG                              >  SRR4302532.4421640/1‑94 (MQ=60)
                                                       CCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCG                              >  SRR4302532.2431676/1‑94 (MQ=60)
                                                       CCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCG                              <  SRR4302532.4360201/94‑1 (MQ=60)
                                                        CGACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCGT                             <  SRR4302532.2935508/94‑1 (MQ=60)
                                                          ACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCGTCA                           <  SRR4302532.1753812/94‑1 (MQ=60)
                                                          ACAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCGTCA                           <  SRR4302532.2570358/94‑1 (MQ=60)
                                                           CAGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCGTCAG                          >  SRR4302532.4537244/1‑94 (MQ=60)
                                                            AGCCAGCGGGCTAACATCATCGATATCTGGCGCAGCA‑‑‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCCGAACAACGGTAACCGTCAGC                         >  SRR4302532.949021/1‑94 (MQ=60)
                                                            AGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCGTCAGC                         <  SRR4302532.2459178/94‑1 (MQ=60)
                                                            AGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCGTCAGC                         >  SRR4302532.3657605/1‑94 (MQ=60)
                                                            AGCCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCGTCAGC                         >  SRR4302532.3484969/1‑94 (MQ=60)
                                                              CCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCGTCAGCAT                       >  SRR4302532.5973742/1‑94 (MQ=60)
                                                              CCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCGTCAGCAT                       <  SRR4302532.3548661/94‑1 (MQ=60)
                                                              CCAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCGTCAGCAT                       >  SRR4302532.1930725/1‑94 (MQ=60)
                                                               CAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCGTCAGCATG                      >  SRR4302532.2961880/1‑94 (MQ=60)
                                                               CAGCAGGCTAACATCATCGATATCTGGCGCAGCA‑‑‑‑CCGTCGATGCCATGTTCGAGAACTATCCCCTCCCGCAGAACAACGGTAACCGCCAGCATG                      >  SRR4302532.3751596/1‑94 (MQ=60)
                                                                   AGGCTAACATCATCGATATCTGGCGCAGCA‑‑‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCGTCAGCATGTCCG                  <  SRR4302532.2319687/94‑1 (MQ=60)
                                                                   AGGCTAACATCATCGATATCTGGCGCAGCA‑‑‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCGTCAGCATGTCCG                  >  SRR4302532.1372637/1‑94 (MQ=60)
                                                                   AGGCTAACATCATAGATATCTGGCGCAGCA‑‑‑‑CCGTCGATGCCATGTTCGACAACTCTCCCTTCCCGCAGAACAACGGCAACCGTCAGGATGTCCG                  >  SRR4302532.5589995/1‑94 (MQ=57)
                                                                    GGCTAACATCATCGATATCTGGCGCAGCA‑‑‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCGTCAGCATGTCCGC                 >  SRR4302532.1597611/1‑94 (MQ=60)
                                                                      CTAACATCATCGATATCTGGCGCAGCA‑‑‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCGTCAGCATGTCCGCTG               >  SRR4302532.4698544/1‑94 (MQ=60)
                                                                      CTAACATCATCGATATCTGGCGCAGCA‑‑‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCGTCAGCATGTCCGCTG               >  SRR4302532.2380979/1‑94 (MQ=60)
                                                                      CTAACATCATCGATATCTGGCGCAGCA‑‑‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCCTCAGCATGTCCGCTG               >  SRR4302532.4599105/1‑94 (MQ=60)
                                                                       TAACATCATCGATATCTGGCGCAGCA‑‑‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCGTCAGCATGTCCGCTGG              >  SRR4302532.386145/1‑94 (MQ=60)
                                                                       TAACATCATCGATATCTGGCGCAGCA‑‑‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCGTCAGCATGTCCGCTGG              >  SRR4302532.3760745/1‑94 (MQ=60)
                                                                       TAACATCATCGATATCTGGCGCAGCA‑‑‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCGTCAGCATGTCCGCTGG              >  SRR4302532.4893424/1‑94 (MQ=60)
                                                                         ACATCATCGATATCTGGCGCAGCA‑‑‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCGTCAGCATGTCCGCTGGAC            <  SRR4302532.6088938/94‑1 (MQ=60)
                                                                          CATCATCGATATCTGGCGCAGCA‑‑‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCGTCAGCATGTCCGCTGGACG           <  SRR4302532.396683/94‑1 (MQ=60)
                                                                          CATCATCGATATCTGGCGCAGCA‑‑‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCGTCAGCATGTCCGCTGGACG           <  SRR4302532.1820060/94‑1 (MQ=60)
                                                                          CATCATCGATATCTGGCGC‑‑‑‑AGCCCCGTCGATGCCATGTTCTAGAACTATCCCTTCCTGCAGAACAACGGTAACCGTCAGCATGTCCGCTGGACG           <  SRR4302532.6226311/94‑1 (MQ=60)
                                                                           ATCATCGATATCTGGCGCAGCA‑‑‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCGTCAGCATGTCCGCTGGcggg          >  SRR4302532.1607385/1‑90 (MQ=60)
                                                                           ATCATCGATATCTGGCGCAGCA‑‑‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCGTCAGCATGTCCGCTGGACGG          <  SRR4302532.1142662/94‑1 (MQ=60)
                                                                             CATCGATATCTGGCGCAGCA‑‑‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCGTCAGCATGTCCGCTGGACGGCA        >  SRR4302532.4333208/1‑94 (MQ=60)
                                                                              CTCGATATCTGGCGCAGCA‑‑‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCGTCAGCATGTCCGCTGGACGGCAC       <  SRR4302532.1724389/94‑1 (MQ=60)
                                                                              ATCGATATCTGGCGCAGCA‑‑‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCGTCAGCATGTCCGCTGGACGGCAC       >  SRR4302532.4667136/1‑94 (MQ=60)
                                                                               TCGATATCTGGCGCAGCA‑‑‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCGTCAGCATGTCCGCTGGACGGCACT      <  SRR4302532.1571229/94‑1 (MQ=60)
                                                                               TCGATATCTGGCGCAGCA‑‑‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCGTCAGCATGTCCGCTGGACGGCACT      <  SRR4302532.944224/94‑1 (MQ=60)
                                                                                CGATATCTGGCGCAGCA‑‑‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCGTCAGCATGTCCGCTGGACGGCACTG     <  SRR4302532.3049434/94‑1 (MQ=60)
                                                                                   TATCTGGCGCAGCA‑‑‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCGTCAGCATGTCCGCTGGACGGCACTGACT  <  SRR4302532.3076840/94‑1 (MQ=60)
                                                                                   TATCTGGCGCAGCA‑‑‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCGTCAGCATGTCCGCTGGACGGCACTGACT  >  SRR4302532.1772637/1‑94 (MQ=60)
                                                                                   TATCTGGCGCAGCA‑‑‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCGTCAGCATGTCCGCTGGACGGCACTGACT  >  SRR4302532.3878602/1‑94 (MQ=60)
                                                                                               |                                                                                     
AACGGCGAATACGATCAGGTGGCGTATTACGGTCGTGGACCGGGCGAAAACTACGCCGACAGCCAGCAGGCTAACATCATCGATATCTGGCGC‑‑CAAG‑‑CCGTCGATGCCATGTTCGAGAACTATCCCTTCCCGCAGAACAACGGTAACCGTCAGCATGTCCGCTGGACGGCACTGACT  >  NC_000913/3222851‑3223027

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑