Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I1 R1
|
521 |
238.2 |
12299412 |
96.0% |
11807435 |
93.0 |
Breseq alignment
N/A
GATK/CNVnator alignment
BRESEQ :: bam2aln output
AAAGGTTGAACCTTTGCCCTGTTCGCTGGTAACCGTAATATCGCCGCCCATATTTTTCGCCAGACGACGAGAAACGGCCAGACCAA‑‑‑‑‑‑TA‑‑‑‑‑‑CCGGT‑‑‑‑‑‑GGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTATCCAGCTCATCCTGCGGAATGCCGATACCAGAGTCTTCC > NC_000913/3349170‑3349356
|
AAAGGTTGAACCTTTGCCCTGTTCGCTGGTAACCGTAATATCGCCGCCCATATTTTTCGCCAGACGACGAGAAACGGCCAGACCAA‑‑‑‑‑‑TA‑‑‑‑‑‑CCGGT‑‑‑‑‑‑G < SRR4302532.390379/94‑1 (MQ=60)
AAGGTTGAACCTTTGCCCTGTTCGCTGGTAACCGTAATATCGCCGCCCATATTTTTCGCCAGACGACGAGAAACGGCCAGACCAA‑‑‑‑‑‑TA‑‑‑‑‑‑CCGGT‑‑‑‑‑‑GC < SRR4302532.4083846/94‑1 (MQ=60)
AAGGTTGAACCTTTGCCCTGTTCGCTGGTAACCGTAATATCGCCGCCCATATTTTTCGCCAGACGACGAGAAACGGCCAGACCAA‑‑‑‑‑‑TA‑‑‑‑‑‑CCGGT‑‑‑‑‑‑GC > SRR4302532.1446446/1‑94 (MQ=60)
AGGTTGAACCTTTGCCCTGTTCGCTGGTAACCGTAATATCGCCGCCCATATTTTTCGCCAGACGACGAGAAACGGCCAGACCAA‑‑‑‑‑‑TA‑‑‑‑‑‑CCGGT‑‑‑‑‑‑GCC > SRR4302532.2619200/1‑94 (MQ=60)
TGAACCTTTGCCCTGTTCGCTGGTAACCGTAATATCGCCGCCCATATTTTTCGCCAGACGACGAGAAACGGCCAGACCAA‑‑‑‑‑‑TA‑‑‑‑‑‑CCGGT‑‑‑‑‑‑Gccggtg > SRR4302532.2855044/1‑88 (MQ=60)
GAACCTTTGCCCTGTTCGCTGGTAACCGTAATATCGCCGCCCATATTTTTCGCCAGACGACGAGAAACGGCCAGACCAA‑‑‑‑‑‑TA‑‑‑‑‑‑CCGGT‑‑‑‑‑‑Gccggtgg > SRR4302532.3162440/1‑87 (MQ=60)
GAACCTTTGCCCTGTTCGCTGGTAACCGTAATATCGCCGCCCATATTTTTCGCCAGACGACGAGAAACGGCCAGACCAA‑‑‑‑‑‑TA‑‑‑‑‑‑CCGGT‑‑‑‑‑‑Gccggtgg < SRR4302532.3179465/94‑8 (MQ=60)
CTTTGCCCTGTTCGCTGGTAACCGTAATATCGCCGCCCATATTTTTCGCCAGACGACGAGAAACGGCCAGACCAA‑‑‑‑‑‑TA‑‑‑‑‑‑CCGGT‑‑‑‑‑‑Gccggtggcagg < SRR4302532.4312508/94‑12 (MQ=60)
CTTTGCCCTGTTCGCTGGTAACCGTAATATCGCCGCCCATATTTTTCGCCAGACGACGAGAAACGGCCAGACCAA‑‑‑‑‑‑TA‑‑‑‑‑‑CCGGT‑‑‑‑‑‑Gccggtggcagg > SRR4302532.3659464/1‑83 (MQ=60)
CTTTGCCCTGTTCGCTGGTAACCGTAATATCGCCGCCCATATTTTTCGCCAGACGACGAGAAACGGCCAGACCAA‑‑‑‑‑‑TA‑‑‑‑‑‑CCGGT‑‑‑‑‑‑Gccggtggcagg < SRR4302532.1745055/94‑12 (MQ=60)
CTTTGCCCTGTTCGCTGGTAACCGTAATATCGCCGCCCATATTTTTCGCCAGACGACGAGAAACGGCCAGACCAA‑‑‑‑‑‑TA‑‑‑‑‑‑CCGGT‑‑‑‑‑‑Gccggtggcagg > SRR4302532.5831272/1‑83 (MQ=60)
TGCCCTGTTCGCTGGTAACCGTAATATCGCCGCCCATATTTTTCGCCAGACGACGAGAAACGGCCAGACCAA‑‑‑‑‑‑TACCGGTGCCGGT‑‑‑‑‑‑GGCAGGTTT < SRR4302532.642449/94‑1 (MQ=60)
TGCCCTGTTCGCTGGTAACCGTAATATCGCCGCCCATATTTTTCGCCAGACGACGAGAAACGGCCAGACCAA‑‑‑‑‑‑TACCGGTGCCGGT‑‑‑‑‑‑GGCAGGTTT < SRR4302532.2719275/94‑1 (MQ=60)
CCTTGTTCGCTGGAAACCGTAATATCGCCGCCCATATTTTTCGCCAGACGACGAGAAACGGCCAGACCAA‑‑‑‑‑‑TA‑‑‑‑‑‑CCGGT‑‑‑‑‑‑Gccggtggcaggattac > SRR4302532.374410/1‑78 (MQ=60)
CCCTGTTCGCTGGTAACCGTAATATCGCCGCCCATATTTTTCGCCAGACGACGAGAAACGGCCAGACCAA‑‑‑‑‑‑TACCGGTGCCGGT‑‑‑‑‑‑GGCAGGTTTAC > SRR4302532.4384161/1‑94 (MQ=60)
CCTGTTCGCTGGTAACCGTAATATCGCCGCCCATATTTTTCGCCAGACGACGAGAAACGGCCAGACCAA‑‑‑‑‑‑TACCGGTGCCGGT‑‑‑‑‑‑GGCAGGTTTACC > SRR4302532.1496565/1‑94 (MQ=60)
CCTGTTCGCTGGTAACCGTAATATCGCCGCCCATATTTTTCGCCAGACGACGAGAAACGGCCAGACCAA‑‑‑‑‑‑TACCGGTGCCGGT‑‑‑‑‑‑GGCAGGTTTACC < SRR4302532.6354088/94‑1 (MQ=60)
CCTGTTCGCTGGTAACCGTAATATCGCCGCCCATATTTTTCGCCAGACGACGAGAAACGGCCAGACCAA‑‑‑‑‑‑TACCGGTGCCGGT‑‑‑‑‑‑GGCAGGTTTACC > SRR4302532.5040177/1‑94 (MQ=60)
CCTGTTCGCTGGTAACCGTAATATCGCCGCCCATATTTTTCGCCAGACGACGAGAAACGGCCAGACCAA‑‑‑‑‑‑TACCGGTGCCGGT‑‑‑‑‑‑GGCAGGTTTACC > SRR4302532.6081335/1‑94 (MQ=60)
CTGTTCGCTGGTAACCGTAATATCGCCGCCCATATTTTTCGCCAGACGACGAGAAACGGCCAGACCAA‑‑‑‑‑‑TAGCGGTGCCGGT‑‑‑‑‑‑GGCAGGTTTACCG > SRR4302532.4627407/1‑94 (MQ=60)
CTGTTCGCTGGTAACCGTAATATCGCCGCCCATATTTTTCGCCAGACGACGAGAAACGGCCAGACCAA‑‑‑‑‑‑TACCGGTGCCGGT‑‑‑‑‑‑GGCAGGTTTACCG < SRR4302532.6318025/94‑1 (MQ=60)
TGTTCGCTGGTAACCGTAATATCGCCGCCCATATTTTTCGCCAGACGACGAGAAACGGCCAGACCAA‑‑‑‑‑‑TACCGGTGCCGGT‑‑‑‑‑‑GGCAGGTTTACCGC > SRR4302532.3670304/1‑94 (MQ=60)
TGTTCGCTGGTAACCGTAATATCGCCGCCCATATTTTTCGCCAGACGACGAGAAACGGCCAGACCAA‑‑‑‑‑‑TACCGGTGCCGGT‑‑‑‑‑‑GGCAGGTTTACCGC > SRR4302532.3670305/1‑94 (MQ=60)
TCGCTGGTAACCGTAATATCGCCGCCCATATTTTTCGCCAGACGACGAGAAACGGCCAGACCAA‑‑‑‑‑‑TACCGGTGCCGGT‑‑‑‑‑‑GGCAGGTTTACCGCCAT > SRR4302532.5225982/1‑94 (MQ=60)
GGTAACCGTAATATCGCCGCCCATATTTTTCGCCAGACGACGAGAAACGGCCAGACCAA‑‑‑‑‑‑TACCGGTGCCGGT‑‑‑‑‑‑GGCAGGTTTACCGCCATGACTG > SRR4302532.597011/1‑94 (MQ=60)
GGTAACCGTAATATCGCCGCCCATATTTTTCGCCAGACGACGAGAAACGGCCAGACCAA‑‑‑‑‑‑TACCGGTGCCGGT‑‑‑‑‑‑GGCAGGCTTACCGCCATGACTG > SRR4302532.597010/1‑94 (MQ=60)
GGTAACCGTAATATCGCCGCCCATATTTTCCGCCAGACGACGAGAAACGGCCAGACCAA‑‑‑‑‑‑TACCGGTGCCGGT‑‑‑‑‑‑GGCAGGTTTACCGCCATGACTG < SRR4302532.2117651/94‑1 (MQ=60)
TAACCGTAATATCGCCGCCCATATTTTTCGCCAGACGACGAGAAACGGCCAGACCAA‑‑‑‑‑‑TACCGGTGCCGGT‑‑‑‑‑‑GGCAGGTTTACCGCCATGACTGTC > SRR4302532.904499/1‑94 (MQ=60)
CCGTAATATCGCCGCCCATATTTTTCGCCAGACGACGAGAAACGGCCAGACCAA‑‑‑‑‑‑TACCGGTGCCGGT‑‑‑‑‑‑GGCAGGTTTACCGCCATGACTGTCTTT < SRR4302532.157762/94‑1 (MQ=60)
CGTAATATCGCCGCCCATATTTTTCGCCAGACGACGAGAAACGGCCAGACCAA‑‑‑‑‑‑TACCGGTGCCGGT‑‑‑‑‑‑GGCAGGTTTACCGCCATGACTGTCTTTC < SRR4302532.2070248/94‑1 (MQ=60)
GTAATATCGCCGCCCATATTTTTCGCCAGACGACGAGAAACGGCCAGACCAA‑‑‑‑‑‑TACCGGTGCCGGT‑‑‑‑‑‑GGCAGGTTTACCGCCATGACTGTCTTTCA < SRR4302532.5320614/94‑1 (MQ=60)
GTAATATCGCCGCCCATATTTTTCGCCAGACGACGAGAAACGGCCAGACCAA‑‑‑‑‑‑TACCGGTGCCGGT‑‑‑‑‑‑GGCAGGTTTACCGCCATGACTGTCTTTCA < SRR4302532.32379/94‑1 (MQ=60)
TAATATCGCCGCCCATATTTTTCGCCAGACGACGAGAAACGGCCAGACCAA‑‑‑‑‑‑TACCGGTGCCGGT‑‑‑‑‑‑GGCAGGTTTACCGCCATGACTGTCTTTCAC < SRR4302532.3142219/94‑1 (MQ=60)
TAATATCGCCGCCCATATTTTTCGCCAGACGACGAGAAACGGCCAGACCAA‑‑‑‑‑‑TACCGGTGCCGGT‑‑‑‑‑‑GGCAGGTTTACCGCCATGACTGTCTTTCAC > SRR4302532.3905322/1‑94 (MQ=60)
TAATATCGCCGCCCATATTTTTCGCCAGACGACGAGAAACGGCCAGACCAA‑‑‑‑‑‑TACCGGTGCCGGT‑‑‑‑‑‑GGCAGGTTTACCGCCATGACTGTCTTTCAC > SRR4302532.4286257/1‑94 (MQ=60)
TAATATCGCCGCCCATATTTTTCGCCAGACGACGAGAAACGGCCAGACCAA‑‑‑‑‑‑TACCGGTGCCGGT‑‑‑‑‑‑GGCAGGTTTACCGCCATGACTGTCTTTCAC > SRR4302532.4212236/1‑94 (MQ=60)
AATATCGCCGCCCATATTTTTCGCCAGACGACGAGAAACGGCCAGACCAA‑‑‑‑‑‑TACCGGTGCCGGT‑‑‑‑‑‑GGCAGGTTTACCGCCATGACTGTCTTTCACC > SRR4302532.4988498/1‑94 (MQ=60)
ATATCGCCGCCCATATTTTTCGCCAGACGACGAGAAACGGCCAGACCAA‑‑‑‑‑‑TACCGGTGCCGGT‑‑‑‑‑‑GGCAGGTTTACCGCCATGACTGTCTTTCACCT > SRR4302532.5173779/1‑94 (MQ=60)
TATCGCCGCCCATATTTTTCGCCAGACGACGAGAAACGGCCAGACCAA‑‑‑‑‑‑TACCGGTGCCGGT‑‑‑‑‑‑GGCAGGTTTACCGCCATGACTGTCTTTCACCTG > SRR4302532.761972/1‑94 (MQ=60)
TATCGCCGCCCATATTTTTCGCCAGACGACGAGAAACGGCCAGACCAA‑‑‑‑‑‑TACCGGTGCCGGT‑‑‑‑‑‑GGCAGGTTTACCGCCATGACTGTCTTTCACCTG < SRR4302532.5563556/94‑1 (MQ=60)
ATCGCCGCCCATATTTTTCGCCAGACGACGAGAAACGGCCAGACCAA‑‑‑‑‑‑TACCGGTGCCGGT‑‑‑‑‑‑GGCAGGTTTACCGCCATGACTGTCTTTCACCTGG > SRR4302532.6221615/1‑94 (MQ=60)
ATCGCCGCCCATATTTTTCGCCAGACGACGAGAAACGGCCAGACCAA‑‑‑‑‑‑TACCGGTGCCGGT‑‑‑‑‑‑GGCAGGTTTACCGCCATGACTGTCTTTCACCTGG < SRR4302532.2361429/94‑1 (MQ=60)
ATCGCCGCCCATATTTTTCGCCAGACGACGAGAAACGGCCAGACCAA‑‑‑‑‑‑TACCGGTGCCGGT‑‑‑‑‑‑GGCAGGTTTACCGCCATGACTGTCTTTCACCTGG < SRR4302532.5026542/94‑1 (MQ=60)
TCGCCGCCCATATTTTTCGCCAGACGACGAGAAACGGCCAGACCAA‑‑‑‑‑‑TACCGGTGCCGGT‑‑‑‑‑‑GGCAGGTTTACCGCCATGACTGTCTTTCACCTGGT < SRR4302532.5593671/94‑1 (MQ=60)
CGCCGCCCATATTTTTCGCCAGACGACGAGAAACGGCCAGACCAA‑‑‑‑‑‑TACCGGTGCCGGT‑‑‑‑‑‑GGCAGGTTTACCGCCATGACTGTCTTTCACCCGGTA > SRR4302532.2107834/1‑94 (MQ=60)
GCCGCCCATATTTTTCGCCAGACGACGAGAAACGGCCAGACCAA‑‑‑‑‑‑TACCGGTGCCGGT‑‑‑‑‑‑GGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAA > SRR4302532.2617242/1‑94 (MQ=60)
GCCGCCCATATTTTTCGCCAGACGACGAGAAACGGCCAGACCAA‑‑‑‑‑‑TACCGGTGCCGGT‑‑‑‑‑‑GGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAA < SRR4302532.3193978/94‑1 (MQ=60)
catctcaaATTTTTCGCCAGAGGAAGAGAAACGGCCAGTCCAAAGCCGGTG‑‑‑‑‑‑CCGGT‑‑‑‑‑‑GGCAGGTTTACCGCCATGACTGTCTTTCTCCTGGTAAT < SRR4302532.4617184/86‑1 (MQ=43)
CCGCCCATATTTTTCGCCAGACGACGAGAAACGGCCAGACCAA‑‑‑‑‑‑TACCGGTGCCGGT‑‑‑‑‑‑GGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAAT < SRR4302532.5893323/94‑1 (MQ=60)
CCGCCCATATTTTTCGCCAGACGACGAGAAACGGCCAGACCAA‑‑‑‑‑‑TACCGGTGCCGGT‑‑‑‑‑‑GGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAAT < SRR4302532.4617185/94‑1 (MQ=60)
CGCCCATATTTTTCGCCAGACGACGAGAAACGGCCAGACCAA‑‑‑‑‑‑TACCGGTGCCGGT‑‑‑‑‑‑GGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATA > SRR4302532.5389276/1‑94 (MQ=60)
CGCCCATATTTTTCGCCAGACGACGAGAAACGGCCAGACCAA‑‑‑‑‑‑TACCGGTGCCGGT‑‑‑‑‑‑GGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATA < SRR4302532.1005639/94‑1 (MQ=60)
CGCCCATATTTTTCGCCAGACGACGAGAAACGGCCAGACCAA‑‑‑‑‑‑TACCGGTGCCGGT‑‑‑‑‑‑GGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATA > SRR4302532.2944814/1‑94 (MQ=60)
CGCCCATATTTTTCGCCAGACGACGAGAAACGGCCAGACCAA‑‑‑‑‑‑TACCGGTGCCGGT‑‑‑‑‑‑GGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATA < SRR4302532.2680836/94‑1 (MQ=60)
CGCCCATATTTTTCGCCAGACGACGAGAAACGGCCAGACCAA‑‑‑‑‑‑TACCGGTGCCGGT‑‑‑‑‑‑GGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATA > SRR4302532.2433995/1‑94 (MQ=60)
CCATATTTTTCGCCAGACGACGAGAAACGGCCAGACCAA‑‑‑‑‑‑TACCGGTGCCGGT‑‑‑‑‑‑GGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACAT < SRR4302532.2380331/94‑1 (MQ=60)
CCATATTTTTCGCCAGACGACGAGAAACGGCCAGACCAA‑‑‑‑‑‑TACCGGTGCCGGT‑‑‑‑‑‑GGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACAT < SRR4302532.2538409/94‑1 (MQ=60)
CCATATTTTTCGCCAGACGACGAGAAACGGCCAGACCAA‑‑‑‑‑‑TACCGGTGCCGGT‑‑‑‑‑‑GGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACAT > SRR4302532.1879806/1‑94 (MQ=60)
CCATATTTTTCGCCAGACGACGAGAAACGGCCAGACCAA‑‑‑‑‑‑TACCGGTGCCGGT‑‑‑‑‑‑GGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACAT < SRR4302532.2449953/94‑1 (MQ=60)
CCATATGTTTCGACAGACGACGAGAAACGCCCAGACCAA‑‑‑‑‑‑TACCGGTGCCGGT‑‑‑‑‑‑GGAAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACAT < SRR4302532.3820582/94‑1 (MQ=60)
CATATTTTTCGCCAGACGACGAGAAACGGCCAGACCAA‑‑‑‑‑‑TACCGGTGCCGGT‑‑‑‑‑‑GGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTCATACATG > SRR4302532.5607174/1‑94 (MQ=60)
CATATTTTTCGCCAGACGACGAGAAACGGCCAGACCAA‑‑‑‑‑‑TACCGGTGCCGGT‑‑‑‑‑‑GGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATG > SRR4302532.3059534/1‑94 (MQ=60)
CATATTTTTCGCCAGACGACGAGAAACGGCCAGACCAA‑‑‑‑‑‑TACCGGTGCCGGT‑‑‑‑‑‑GGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATG < SRR4302532.4715461/94‑1 (MQ=60)
CATATTTTTCGCCAGACGACGAGAAACGGCCAGACCAA‑‑‑‑‑‑TACCGGTGCCGGT‑‑‑‑‑‑GGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATG < SRR4302532.318165/94‑1 (MQ=60)
ATATTTTTCGCCAGACGACGAGAAACGGCCAGACCAA‑‑‑‑‑‑TACCGGTGCCGGT‑‑‑‑‑‑GGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGG > SRR4302532.3211186/1‑94 (MQ=60)
ATATTTTTCGCCAGACGACGAGAAACGGCCAGACCAA‑‑‑‑‑‑TA‑‑‑‑‑‑CCGGTGCCGGGGGCAGGTTTACCGCCATGACTGTGTTTCACCTGGTAATACATGG > SRR4302532.6226410/1‑94 (MQ=60)
ATATTTTTCGCCAGACGACGAGAAACGGCCAGACCAA‑‑‑‑‑‑TA‑‑‑‑‑‑CCGGTGCCGGCGGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGG > SRR4302532.5943302/1‑94 (MQ=60)
TATTTTTCGCCAGACGACGAGAAACGGCCAGACCAA‑‑‑‑‑‑TACCGGTGCCGGT‑‑‑‑‑‑GGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGC < SRR4302532.1807198/94‑1 (MQ=60)
ATTTTTCGCCAGACGACGAGAAACGGCCAGACCAA‑‑‑‑‑‑TACCGGTGCCGGT‑‑‑‑‑‑GGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCG > SRR4302532.184245/1‑94 (MQ=60)
TTTTTCGCCAGACGACGAGAAACGGCCAGACCAA‑‑‑‑‑‑TACCGGTGCCGGT‑‑‑‑‑‑GGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGA > SRR4302532.5113968/1‑94 (MQ=60)
TTTCGCCAGACGACGAGAAACGGCCAGACCAA‑‑‑‑‑‑TACCGGTGCCGGT‑‑‑‑‑‑GGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAA < SRR4302532.1057888/94‑1 (MQ=60)
TTCGCCAGACGACGAGAAACGGCCAGACCAA‑‑‑‑‑‑TACCGGTGCCGGT‑‑‑‑‑‑GGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATCCATGGCGAAAA > SRR4302532.4676962/1‑94 (MQ=60)
CGCCAGACGACGAGAAACGGCCAGACCAA‑‑‑‑‑‑TACCGGTGCCGGT‑‑‑‑‑‑GGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATT > SRR4302532.2430376/1‑94 (MQ=60)
GCCAGACGACGAGAAACGGCCAGACCAA‑‑‑‑‑‑TACCGGTGCCGGT‑‑‑‑‑‑GGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTT < SRR4302532.2660732/94‑1 (MQ=60)
CCAGACGACGAGAAACGGCCAGACCAA‑‑‑‑‑‑TACCGGTGCCGGT‑‑‑‑‑‑GGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTT > SRR4302532.4224293/1‑94 (MQ=60)
CAGACGACGAGAAACGGCCAGACCAA‑‑‑‑‑‑TACCGGTGCCGGT‑‑‑‑‑‑GGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTA > SRR4302532.4482523/1‑94 (MQ=60)
AGACGACGAGAAACGGCCAGACCAA‑‑‑‑‑‑TACCGGTGCCGGT‑‑‑‑‑‑GGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTAT > SRR4302532.3314282/1‑94 (MQ=60)
GACGACGAGAAACGGCCAGACCAA‑‑‑‑‑‑TACCGGTGCCGGT‑‑‑‑‑‑GGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTATC < SRR4302532.5223905/94‑1 (MQ=60)
GACGACGAGAAACGGCCAGACCAA‑‑‑‑‑‑TACCGGTGCCGGT‑‑‑‑‑‑GGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTATC < SRR4302532.5508794/94‑1 (MQ=60)
ACGACGAGAAACGGCCAGACCAA‑‑‑‑‑‑TACCGGTGCCGGT‑‑‑‑‑‑GGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTATCC < SRR4302532.1622589/94‑1 (MQ=60)
ACGACGAGAAACGGCCAGACCAA‑‑‑‑‑‑TACCGGTGCCGGT‑‑‑‑‑‑GGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTATCC < SRR4302532.300022/94‑1 (MQ=60)
ACGACGAGAAACGGCCAGACCAA‑‑‑‑‑‑TACCGGTGCCGGT‑‑‑‑‑‑GGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTATCC > SRR4302532.2241411/1‑94 (MQ=60)
CGACGAGAAACGGCCAGACCAA‑‑‑‑‑‑TACCGGTGCCGGT‑‑‑‑‑‑GGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTATCCA < SRR4302532.4671888/94‑1 (MQ=60)
CGACGAGAAACGGCCAGACCAA‑‑‑‑‑‑TACCGGTGCCGGT‑‑‑‑‑‑GGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTATCCA < SRR4302532.5671618/94‑1 (MQ=60)
CGACGAGAAACGGCCAGACCAA‑‑‑‑‑‑TACCGGTGCCGGT‑‑‑‑‑‑GGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTATCCA < SRR4302532.4575722/94‑1 (MQ=60)
GACGAGAAACGGCCAGACCAA‑‑‑‑‑‑TACCGGTGCCGGT‑‑‑‑‑‑GGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTATCCAG < SRR4302532.2046250/94‑1 (MQ=60)
GACGAGAAACGGCCAGACCAA‑‑‑‑‑‑TACCGGTGCCGGT‑‑‑‑‑‑GGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTATCCAG < SRR4302532.2046251/94‑1 (MQ=60)
ACGAGAAACGGCCAGACCAA‑‑‑‑‑‑TACCGGTGCCGGT‑‑‑‑‑‑GGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTATCCAGC < SRR4302532.4720988/94‑1 (MQ=60)
CGAGAAACGGCCAGACCAA‑‑‑‑‑‑TACCGGTGCCGGT‑‑‑‑‑‑GGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTATCCAGCT < SRR4302532.2340939/94‑1 (MQ=60)
AGAAACGGCCAGACCAA‑‑‑‑‑‑TACCGGTGCCGGT‑‑‑‑‑‑GGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTATCCAGCTCA > SRR4302532.509962/1‑94 (MQ=60)
GAAACGGCCAGACCAA‑‑‑‑‑‑TACCGGTGCCGGT‑‑‑‑‑‑GGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAGAATTTTATCCAGCTCAT < SRR4302532.4310267/94‑1 (MQ=60)
GAAACGGCCAGACCAA‑‑‑‑‑‑TACCGGTGCCGGT‑‑‑‑‑‑GGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTATCCAGCTCAT < SRR4302532.2785785/94‑1 (MQ=60)
ACGGCCAGACCAA‑‑‑‑‑‑TACCGGTGCCGGT‑‑‑‑‑‑GGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTATCCAGCTCATCCT > SRR4302532.2502140/1‑94 (MQ=60)
ACGGCCAGACCAA‑‑‑‑‑‑TACCGGTGCCGGT‑‑‑‑‑‑GGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTATCCAGCTCATCCT < SRR4302532.6115710/94‑1 (MQ=60)
CGGCCAGACCGA‑‑‑‑‑‑TACCGGTGCCGGT‑‑‑‑‑‑GGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTATCCAGCTCATCCTG < SRR4302532.4931461/94‑1 (MQ=60)
CGGCCAGACCAA‑‑‑‑‑‑TACCGGTGCCGGT‑‑‑‑‑‑GGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTATCCAGCTCATCCTG < SRR4302532.3893312/94‑1 (MQ=60)
CGGCCAGACCAA‑‑‑‑‑‑TACCGGTGCCGGT‑‑‑‑‑‑GGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTATCCAGCTCATCCTG < SRR4302532.3269605/94‑1 (MQ=60)
CGGCCAGACCAA‑‑‑‑‑‑TACCGGTGCCGGT‑‑‑‑‑‑GGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTATCCAGCTCATCCTG < SRR4302532.163494/94‑1 (MQ=60)
CGGCCAGACCAA‑‑‑‑‑‑TACCGGTGCCGGT‑‑‑‑‑‑GGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTATCCAGCTCATCCTG > SRR4302532.1102485/1‑94 (MQ=60)
GGCCAGACCAA‑‑‑‑‑‑TACCGGTGCCGGT‑‑‑‑‑‑GGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTATCCAGCTCATCCTGC > SRR4302532.991575/1‑94 (MQ=60)
GGCCAGACCAA‑‑‑‑‑‑TACCGGTGCCGGT‑‑‑‑‑‑GGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTATCCAGCTCATCCTGC > SRR4302532.4547457/1‑94 (MQ=60)
GCCAGACCAA‑‑‑‑‑‑TACCGGTGCCGGT‑‑‑‑‑‑GGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTATCCAGCTCATCCTGCG < SRR4302532.5090475/94‑1 (MQ=60)
GCCAGACCAA‑‑‑‑‑‑TACCGGTGCCGGT‑‑‑‑‑‑GGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTATCCAGCTCATCCTGCG < SRR4302532.2700378/94‑1 (MQ=60)
CCAGACCAA‑‑‑‑‑‑TACCGGTGCCGGT‑‑‑‑‑‑GGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTATCCAGCTCATCCTGCGG < SRR4302532.2122076/94‑1 (MQ=60)
CCAGACCAA‑‑‑‑‑‑TACCGGTGCCGGT‑‑‑‑‑‑GGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTATACAGCTCATCCTGCGG > SRR4302532.5574746/1‑94 (MQ=60)
CAGACCAA‑‑‑‑‑‑TACCGGTGCCGGT‑‑‑‑‑‑GGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTATCCAGCTCATCCTGCGGA > SRR4302532.4186136/1‑94 (MQ=60)
CAGACCAA‑‑‑‑‑‑TACCGGTGCCGGT‑‑‑‑‑‑GGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTATCCAGCTCATCCTGCGGA > SRR4302532.6291250/1‑94 (MQ=60)
CAGACCAA‑‑‑‑‑‑TACCGGTGCCGGT‑‑‑‑‑‑GGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTATCCAGCTCATCCTGCGGA > SRR4302532.5401804/1‑94 (MQ=60)
AGACCAA‑‑‑‑‑‑TACCGGTGCCGGT‑‑‑‑‑‑GGCAGGTTTACCGCCATGCCTGTCTTTCACCTGGTAATACACGTCGAAAATTTTATCCAGCTCATCCTGCGGAA > SRR4302532.4659523/1‑94 (MQ=60)
AGACCAA‑‑‑‑‑‑TACCGGTGCCGGT‑‑‑‑‑‑GGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTATCCAGCTCATCCTGCGGAA < SRR4302532.124612/94‑1 (MQ=60)
GACCAA‑‑‑‑‑‑TACCGGTGCCGGT‑‑‑‑‑‑GGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTATCCAGCTCATCCTGCGGAAT < SRR4302532.2189183/94‑1 (MQ=60)
accaataccggtgCCGGT‑‑‑‑‑‑GGCATGTTTGCCGCCATGACTGTCTTTCCCCTGGTAATACATGGCGAAAATTTTATCCAGCCGATCCTGCGGAATG < SRR4302532.2695321/81‑1 (MQ=60)
accaataccggtgCCGGT‑‑‑‑‑‑GGCAGGTTTACCGCCATGCCTGTATTTCACCTGGTAATACATGGCGAAAATTTTATCCAGTTCATCCTGCGGAATG > SRR4302532.2304082/14‑94 (MQ=60)
accaataccggtgCCGGT‑‑‑‑‑‑GGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTATCCAGCTCATCCTGCGGAATG < SRR4302532.5762499/81‑1 (MQ=60)
accaataccggtgCCGGT‑‑‑‑‑‑GGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTATCCAGCTCATCCTGCGGAATG > SRR4302532.3106345/14‑94 (MQ=60)
accaataccggtgCCGGT‑‑‑‑‑‑GGCAGGGTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTATCCAGCTCATCCTGCGGAATG > SRR4302532.4116022/14‑94 (MQ=60)
ccaataccggtgCCGGT‑‑‑‑‑‑GGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTATCCAGCTCATCCTGCGGAATGC > SRR4302532.3050911/13‑94 (MQ=60)
caataccggtgCCGGT‑‑‑‑‑‑GGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTATCCAGCTCATCCTGCGGAATGCC < SRR4302532.5369322/83‑1 (MQ=60)
caataccggtgCCGGT‑‑‑‑‑‑GGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTATCCAGCTCATCCTGCGGAATGCC < SRR4302532.1461406/83‑1 (MQ=60)
aataccggtgCCGGT‑‑‑‑‑‑GGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTATCCAGCTCATCCTGCGGAATGCCG < SRR4302532.4497893/84‑1 (MQ=60)
ataccggtgCCGGT‑‑‑‑‑‑GGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTATCCAGCTCATCCTGCGGAATGCCGA > SRR4302532.4721626/10‑94 (MQ=60)
ataccggtgCCGGT‑‑‑‑‑‑GGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTATCCAGCTCATCCTGCGGAATGCCGA > SRR4302532.988130/10‑94 (MQ=60)
tccggtgCCGGT‑‑‑‑‑‑GGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTATCCAGCTCATCCTGCGGAATGCCGATA < SRR4302532.1824403/87‑1 (MQ=60)
G‑‑‑‑‑‑CCGGT‑‑‑‑‑‑GGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTATCCAGCTCATCCTGCGGAATGCCGATACCAGAG < SRR4302532.1018867/94‑1 (MQ=60)
G‑‑‑‑‑‑CCGGT‑‑‑‑‑‑GGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTATCCAGCTCATCCTGCGGAATGCCGATACCAGAG < SRR4302532.3342951/94‑1 (MQ=60)
G‑‑‑‑‑‑CCGGT‑‑‑‑‑‑GGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTATCCAGCTCATCCTGCGGAATGCCGATACCAGAG > SRR4302532.2854016/1‑94 (MQ=60)
cggtgCCGGT‑‑‑‑‑‑GGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTATCCAGCTCATCCTGCGGAATGCCGATACC < SRR4302532.156524/89‑1 (MQ=60)
cggtgCCGGT‑‑‑‑‑‑GGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTATCCAGCTCATCCTGCGGAATGCCGATACC < SRR4302532.4519793/89‑1 (MQ=60)
cggtgCCGGT‑‑‑‑‑‑GGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTATCCAGCTCATCCTGCGGAATGCCGATACC > SRR4302532.2740493/6‑94 (MQ=60)
ggtgCCGGT‑‑‑‑‑‑GGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTATCCAGCTCATCCTGCGGAATGCCGATACCA < SRR4302532.5060153/90‑1 (MQ=60)
ggtgCCGGT‑‑‑‑‑‑GGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTATCCAGCTCATCCTGCGGAATGCCGATACCA < SRR4302532.2493306/90‑1 (MQ=60)
gtgCCGGT‑‑‑‑‑‑GGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTATCCAGCTCATCCTGCGGAATGCCGATACCAG < SRR4302532.5565909/91‑1 (MQ=60)
ggCCGGT‑‑‑‑‑‑GGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTATCCAGCTCATCCTGCGGAATGCCGATACCAGA < SRR4302532.5102284/92‑1 (MQ=60)
CCGGT‑‑‑‑‑‑GGCAGTTTTACCGCCATGACTGTCTTTCACCAGGTAATACATGGCGAAAATTTTATCCATCTCATCCTGCGGAATGCCGATACCAGAGT < SRR4302532.5818353/94‑1 (MQ=60)
CCGGT‑‑‑‑‑‑GGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTATCCAGCTCATCCTGCGGAATGCCGATACCAGAGT < SRR4302532.2640554/94‑1 (MQ=60)
CCGGT‑‑‑‑‑‑GGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTATCCAGCTCATCCTGCGGAATGCCGATACCAGAGT < SRR4302532.1649419/94‑1 (MQ=60)
CCGGT‑‑‑‑‑‑GGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTATCCAGCTCATCCTGCGGAATGCCGATACCAGAGT < SRR4302532.5818352/94‑1 (MQ=60)
CCGGT‑‑‑‑‑‑GGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTATCCAGCTCATCCTGCGGAATGCCGATACCAGAGT < SRR4302532.5818351/94‑1 (MQ=60)
CGGT‑‑‑‑‑‑AGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTATCCAGCTCATCCTGCGGAATGCCGATACCAGAGTC < SRR4302532.1488531/94‑1 (MQ=60)
GGT‑‑‑‑‑‑GGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTATCCAGCTCATCCTGCGGAATGCCGATACCAGAGTCT > SRR4302532.2143819/1‑94 (MQ=60)
GGT‑‑‑‑‑‑GGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTATCCAGCTCATCCTGCGGAATGCCGATACCAGAGTCT < SRR4302532.1929903/94‑1 (MQ=60)
GGT‑‑‑‑‑‑GGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTATCCAGCTCATCCTGCGGAATGCCGATACCAGAGTCT < SRR4302532.1324724/94‑1 (MQ=60)
GT‑‑‑‑‑‑GGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTATCCAGCTCATCCTGCGGAATGCCGATACCAGAGTCTT > SRR4302532.3970942/1‑94 (MQ=60)
GGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTATCCAGCTCATCCTGCGGAATGCCGATACCAGAGTCTTCC < SRR4302532.474219/94‑1 (MQ=60)
GGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTATCCAGCTCATCCTGCGGAATGCCGATACCAGAGTCTTCC < SRR4302532.630107/94‑1 (MQ=60)
GGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTATCCAGCTCATCCTGCGGAATGCCGATACCAGAGTCTTCC < SRR4302532.1730326/94‑1 (MQ=60)
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AAAGGTTGAACCTTTGCCCTGTTCGCTGGTAACCGTAATATCGCCGCCCATATTTTTCGCCAGACGACGAGAAACGGCCAGACCAA‑‑‑‑‑‑TA‑‑‑‑‑‑CCGGT‑‑‑‑‑‑GGCAGGTTTACCGCCATGACTGTCTTTCACCTGGTAATACATGGCGAAAATTTTATCCAGCTCATCCTGCGGAATGCCGATACCAGAGTCTTCC > NC_000913/3349170‑3349356
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
