Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I1 R1
|
521 |
238.2 |
12299412 |
96.0% |
11807435 |
93.0 |
Breseq alignment
N/A
GATK/CNVnator alignment
BRESEQ :: bam2aln output
GGCGAAGGTGCCTGCCCAGCCGGTAAGGCCGAATACCGGCGTCCCATCGGCAATCATTCCCAGACCTAACTTGGCAAAGCTGTCACCAATCAGGTAAGCAAAGGTGCCTTTAATACCATCGGCAGCGCCAATCGCTTTTTTAGGTACAAAGCCAACAGCAGCCACACCAATCAACAATTGCG > NC_000913/3843514‑3843695
|
GGCGAAGGTGCCTGCCCAGCCGGTAAGGCCGAATACCGGCGTCCCATCGGCAATCATTCCCAGACCTAACTTGGCAAAGCTGTCACCAATCAGG > SRR4302532.2517420/1‑94 (MQ=60)
GGCGAAGGTCCCTGCCCAGCCGGTAAGGCCGAATACCGGCGTCCCATCGGCAATCATTCCCAGACCTAACTTGGCAAAGCTGTCACCAATCAGG < SRR4302532.3839026/94‑1 (MQ=60)
CGAAGGTGCCTGCCCAGCCGGTAAGGCCGAATACCGGCGTCCCATCGGCAATCATTCCCAGACCTAACTTGGCAAAGCTGTCACCAATCAGGTA > SRR4302532.3768873/1‑94 (MQ=60)
CGAAGGTGCCTGCCCAGCCGGTAAGGCCGAATACCGGCGTCCCATCGGCAATCATTCCCAGACCTAACTTGGCAAAGCTGTCACCAATCAGGTA < SRR4302532.3786150/94‑1 (MQ=60)
CGAAGGTGCCTGCCCAGCCGGTAAGGCCGAATACCGGCGTCCCATCGGCAATCATTCCCAGACCTAACTTGGCAAAGCTGTCACCAACCAGGTA > SRR4302532.5437907/1‑94 (MQ=60)
GAAGGTGCCTGCCCAGCCGGTAAGGCCGAATACCGGCGTCCCATCGGCAATCATTCCCAGACCTAACTTGGCAAAGCTGTCACCAATCAGGTAA > SRR4302532.1540243/1‑94 (MQ=60)
aaggggccccCCCAGGCGGTAAGGCCGAATACCGGCGTCCCATCGGCAATCATTCCCAGACCTAACTTGGCAAAGCTGTCACCAACCAGGTAAG < SRR4302532.5177680/84‑1 (MQ=60)
AAGGTGCCTGCCCAGCCGGTAAGGCCGAATACCGGCGTCCCATCGGCAATCATTCCCAGACCTAACTTGGCAAAGCTGTCACCAACCAGGTAAG > SRR4302532.3325906/1‑94 (MQ=60)
AAGGTCCCTGCCCAGCCGGTAAGGCCGAATACCGGCGTCCCATCGGCAATCATTCCCAGACCTAACTTGGCAAAGCTGTCACCAATCAGGTAAG < SRR4302532.3135544/94‑1 (MQ=60)
AAGGGGCCTCCCCAGCCGGTAAGGCCGAATACCGGCGTCCCATCGGCAATCATTCCCAGACCTAACTTGGCAAAGCTGTCACCAATCAGGTAAG < SRR4302532.5017119/94‑1 (MQ=60)
GGTGCCTGCCCAGCCGGTAAGGCCGAATACCGGCGTCCCATCGGCAATCATTCCCAGACCTAACTTGGCAAAGCTGTCACCAATCAGGTAAGCA < SRR4302532.3382633/94‑1 (MQ=60)
GGTGCCTGCCCAGCCGGTAAGGCCGAATACCGGCGTCCCATCGGCAATCATTCCCAGACCTAACTTGGCAAAGCTGTCACCAACCAGGTAAGCA > SRR4302532.4355114/1‑94 (MQ=60)
GTGCCTGCCCAGCCGGTAAGGCCGAATACCGGCGTCCCATCGGCAATCATTCCCAGACCTAACTTGGCAAAGCTGTCACCAATCAGGTAAGCAA > SRR4302532.6221119/1‑94 (MQ=60)
GTGCCTGCCCAGCCGGTAAGGCCGAATACCGGCGTCCCATCGGCAATCATTCCCAGACCTAACTTGGCAAAGCTGTCACCAACCAGGTAAGCAA > SRR4302532.3213348/1‑94 (MQ=60)
TGCCTGCCCAGCCGGTAAGGCCGAATACCGGCGTCCCATCGGCAATCATTCCCAGACCTAACTTGGCAAAGCTGTCACCAACCAGGTAAGCAAA > SRR4302532.39496/1‑94 (MQ=60)
TCCCTGCCCAGCCGGTAAGGCCGAATACCGGCGTCCCATCGGCAATCATTCCCAGACCTAACTTGGCAAAGCTGTCACCAACCAGGTAAGCAAA < SRR4302532.1770661/94‑1 (MQ=60)
TCCCTCCCCAGCCGGTAAGGCCGAATACCGGCGTCCCATCGGCAATCATTCCCAGACCTAACTTGGCAAAGCTGTCACCAATCAGGTAAGCAAA < SRR4302532.371552/94‑1 (MQ=60)
GCCTGCCCAGCCGGTAAGGCCGAATACCGGCGTCCCATCGGCAATCATTCCCAGACCTAACTTGGCAAAGCTGTCACCAATCAGGTAAGCAAAG > SRR4302532.4880652/1‑94 (MQ=60)
GCCTGCCCAGCCGGTAAGGCCGAATACCGGCGTCCCATCGGCAATCATTCCCAGACCTAACTTGGCAAAGCTGTCACCAACCAGGTAAGCAAAG < SRR4302532.5942885/94‑1 (MQ=60)
GCCTCCCCAGCCGGTAAGGCCGAATACCGGCGTCCCATCGGCAATCATTCCCAGACCTAACTTGGCAAAGCTGTCACCAATCAGGTAAGCAAAG < SRR4302532.3699611/94‑1 (MQ=60)
GCCTCCCCAGCCGGTAAGGCCGAATACCGGCGTCCCATCGGCAATCATTCCCAGACCTAACTTGGCAAAGCTGTCACCAATCAGGTAAGCAAAG < SRR4302532.291340/94‑1 (MQ=60)
CCTGCCCAGCCGGTAAGGCCGAATACCGGCGTCCCATCGGCAATCATTCCCAGACCTAACTTGGCAAAGCTGTCACCAATCAGGTAAGCAAAGG < SRR4302532.3590240/94‑1 (MQ=60)
CCTGCCCAGCCGGTAAGGCCGAATACCGGCGTCCCATCGGCAATCATTCCCAGACCTAACTTGGCAAAGCTGTCACCAATCAGGTAAGCAAAGG < SRR4302532.652050/94‑1 (MQ=60)
CCTGCCCAGCCGGTAAGGCCGAATACCGGCGTCCCATCGGCAATCATTCCCAGACCTAACTTGGCAAAGCTGTCACCAATCAGGTAAGCAAAGG > SRR4302532.4615578/1‑94 (MQ=60)
CCTGCCCAGCCGGTAAGGCCGAATACCGGCGTCCCATCGGCAATCATTCCCAGACCTAACTTGGCAAAGCTGTCACCAACCAGGTAAGCAAAGG < SRR4302532.1651625/94‑1 (MQ=60)
CTGCCCAGCCGGTAAGGCCGAATACCGGCGTCCCATCGGCAATCATTCCCAGACCTAACTTGGCAAAGCTGTCACCAATCAGGTAAGCAAAGGT < SRR4302532.2528784/94‑1 (MQ=60)
ccCCCAGCCGGTAAGGCCGAATACCGGCGTCCCATCGGCAATCATTCCCAGACCTAACTTGGCAAAGCTGTCACCAACCAGGTAAGCAAAGGTG < SRR4302532.4741533/92‑1 (MQ=60)
TGCCCAGCCGGTAAGGCCGAATACCGGCGTCCCATCGGCAATCATTCCCAGACCTAACTTGGCAAAGCTGTCACCAACCAGGTAAGCAAAGGTG > SRR4302532.1223982/1‑94 (MQ=60)
CGCCCAGCCGGTAAGGCCGAATACCGGCGTCCCATCGGCAATCATTCCCAGACCTAACTTGGCAAAGCTGTCACCAATCAGGTAAGCAAAGGTG < SRR4302532.2012510/94‑1 (MQ=60)
GCCCAGCCGGTAAGGCCGAATACCGGCGTCCCATCGGCAATCATTCCCAGACCTAACTTGGCAAAGCTGTCACCAATCAGGTAAGCAAAGGTGC > SRR4302532.2694585/1‑94 (MQ=60)
CCAGCCGGTAAGGCCGAATACCGGCGTCCCATCGGCAATCATTCCCAGACCTAACTTGGCAAAGCTGTCACCAACCAGGTAAGCAAAGGTGCCT < SRR4302532.2934727/94‑1 (MQ=60)
CCAGCCGGTAAGGCCGAATACCGGCGTCCCATCGGCAATCATTCCCAGACCTAACTTGGCAAAGCTGTCACCAACCAGGTAAGCAAAGGTGCCT > SRR4302532.6090780/1‑94 (MQ=60)
CCAGCCGGTAAGGCCGAATACCGGCGTCCCATCGGCAATCATTCCCAGACCTAACTTGGCAAAGCTGTCACCAACCAGGTAAGCAAAGGTGCCT < SRR4302532.1036469/94‑1 (MQ=60)
CCAGCCGGGAAGGCCGAATACCGGCGTCCCATCGGCAATCATTCCCAGACCTAACTTGGCAAAGCTGTCACAAAACAGGGAAGCAAAGGTGACT > SRR4302532.2271379/1‑94 (MQ=60)
CAGCCGGTAAGGCCGAATACCGGCGTCCCATCGGCAATCATTCCCAGACCTAACTTGGCAAAGCTGTCACCAACCAGGTAAGCAAAGGTGCCTT > SRR4302532.5924772/1‑94 (MQ=60)
AGCCGGTAAGGCCGAATACCGGCGTCCCATCGGCAATCATTCCCAGACCTAACTTGGCAAAGCTGTCACCAATCAGGTAAGCAAAGGTGCCTTT > SRR4302532.4306309/1‑94 (MQ=60)
AGCCGGTAAGGCCGAATACCGGCGTCCCATCGGCAATCATTCCCAGACCTAACTTGGCAAAGCTGTCACCAATCAGGTAAGCAAAGGTGCCTTT > SRR4302532.5471547/1‑94 (MQ=60)
AGCCGGTAAGGCCGAATACCGGCGTCCCATCGGCAATCATTCCCAGACCTAACTTGGCAAAGCTGTCACCAACCAGGTAAGCAAAGGTGCCTTT > SRR4302532.169952/1‑94 (MQ=60)
GCCGGTAAGGCCGAATACCGGCGTCCCATCGGCAATCATTCCCAGACCTAACTTGGCAAAGCTGTCACCAATCAGGTAAGCAAAGGTGCCTTTA < SRR4302532.2040275/94‑1 (MQ=60)
CGGTAAGGCCGAATACCGGCGTCCCATCGGCAATCATTCCCAGACCTAACTTGGCAAAGCTGTCACCAATCAGGTAAGCAAAGGTGCCTTTAAT < SRR4302532.2793253/94‑1 (MQ=60)
CGGTAAGGCCGAATACCGGCGTCCCATCGGCAATCATTCCCAGACCTAACTTGGCAAAGCTGTCACCAACCAGGTAAGCAAAGGTGCCTTTAAT < SRR4302532.1524584/94‑1 (MQ=60)
CGGTAAGGCCGAATACCGGCGTCCCATCGGCAATCATTCCCAGACCTAACTTGGCAAAGCTGTAACCAAGCAGGACAGCAAAGGTGACTTTAAC > SRR4302532.2332811/1‑94 (MQ=60)
CGGTAAGGCCGAATACCGGCGCCCCATCGGCAATCATTCCCAGACCTAACTTGGCAAAGCTGTCACCAATCAGGTAAGCAAAGGTGCCTTTAAT > SRR4302532.6019392/1‑94 (MQ=60)
GTAAGGCCGAATACCGGCGTCCCATCGGCAATCATTCCCAGACCTAACTTGGCAAAGCTGTCACCAATCAGGTAAGCAAAGGTGCCTTTAATAC > SRR4302532.3197699/1‑94 (MQ=60)
GTAAGGCCGAATACCGGCGTCCCATCGGCAATCATTCCCAGACCTAACTTGGCAAAGCTGTCACCAATCAGGTAAGCAAAGGTGCCTTTAATAC < SRR4302532.2441476/94‑1 (MQ=60)
TTAGGCCGAATACCGGCGTCCCATCGGCAATCATTCCCAGACCTAACTTGGCAAAGCTGTCACCAACCAGGCAAGCAAAGGTGCCGTTAATAAC > SRR4302532.1857444/1‑94 (MQ=60)
TAAGGCCGAATACCGGCGTCCCATCGGCAATCATTCCCAGACCTAACTTGGCAAAGCTGTCACCAACCAGGTAAGCAAAGGTGCCTTTAATACC > SRR4302532.1857443/1‑94 (MQ=60)
AAGGCCGAATACCGGCGTCCCATCGGCAATCATTCCCAGACCTAACTTGGCAAAGCTGTCACCAATCAGGTAAGCAAAGGTGCCTTTAATACCA < SRR4302532.5369070/94‑1 (MQ=60)
AAGGCCGAATACCGGCGTCCCATCGGCAATCATTCCCAGACCTAACTTGGCAAAGCTGTCACCAACCAGGTAAGCAAAGGTGCCTTTAATACCA > SRR4302532.4783112/1‑94 (MQ=60)
AAGGCCGAATACCGGCGTCCCATCGGCAATCATTCCCAGACCTAACTTGGCAAAGCTGCCACCAACCAGGTAAGCAAAGGTGCCTTTAATACCA < SRR4302532.3007359/94‑1 (MQ=60)
AGGCCGAATACCGGCGTCCCATCGGCAATCATTCCCAGACCTAACTTGGCAAAGCTGTCACCAATCAGGTAAGCAAAGGTGCCTTTAATACCAT < SRR4302532.192529/94‑1 (MQ=60)
AGGCCGAATACCGGCGTCCCATCGGCAATCATTCCCAGACCTAACTTGGCAAAGCTGTCACCAACCAGGTAAGCAAAGGTGCCTTTAATACCAT < SRR4302532.873396/94‑1 (MQ=60)
GGCCGAATACCGGCGTCCCATCGGCAATCATTCCCAGACCTAACTTGGCAAAGCTGTCACCAATCAGGTAAGCAAAGGTGCCTTTAATACCATC < SRR4302532.2224669/94‑1 (MQ=60)
GCCGAATACCGGCGTCCCATCGGCAATCATTCCCAGACCTAACTTGGCAAAGCTGTCCCCATCCAGGTAAGCAAAGGTGCCTTTAATGCCATCG < SRR4302532.4928094/94‑1 (MQ=60)
GCCGAATACCGGCGTCCCATCGGCAATCATTCCCAGACCTAACTTGGCAAAGCTGTCACCAACCAGGTAAGCAAAGGTGCCTTTAATACCATCG < SRR4302532.2443402/94‑1 (MQ=60)
GCCGAATACCGGCGTCCCATCGGCAATCATTCCCAGACCTAACTTGGCAAAGCTGTCACCAACCAGGTAAGCAAAGGTGCCTTTAATACCATCG > SRR4302532.2401443/1‑94 (MQ=60)
GCCGAATACCGGCGTCCCATCGGCAATCATTCCCAGACCTAACTTGGCAAAGCTGTCACCAACCAGGTAAGCAAAGGTGCCTTTAATACCATCG > SRR4302532.498773/1‑94 (MQ=60)
GCCGAATACCGGCGTCCCATCGGCAATCATTCCCAGACCTAACTTGGCAAAGCTGTCACCAACCAGGTAAGCAAAGGTGCCTTTAATACCATCG < SRR4302532.5635694/94‑1 (MQ=60)
CCGAATACCGGCGTCCCATCGGCAATCATTCCCAGACCTAACTTGGCAAAGCTGTCACCAATCAGGTAAGCAAAGGTGCCTTTAATACCATCGG > SRR4302532.3750334/1‑94 (MQ=60)
CCGAATACCGGCGTCCCATCGGCAATCATTCCCAGACCTAACTTGGCAAAGCTGTCACCAATCAGGTAAGCAAAGGTGCCTTTAATACCATCGG > SRR4302532.719993/1‑94 (MQ=60)
CCGAATACCGGCGTCCCATCGGCAATCATTCCCAGACCTAACTTGGCAAAGCTGTCACCAACCAGGTAAGCAAAGGTGCCTTTAATACCATCGG > SRR4302532.4806307/1‑94 (MQ=60)
CCGAATACCGGCGTCCCATCGGCAATCATTCCCAGACCTAACTTGGCAAAGCTGTCACCAACCAGGTAAGCAAAGGTGCCTTTAATACCATCGG < SRR4302532.2968536/94‑1 (MQ=60)
CGAATACCGGCGTCCCATCGGCAATCATTCCCAGACCTAACTTGGCAAAGCTGTCACCAATCAGGTAAGCAAAGGTGCCTTTAATACCATCGGC > SRR4302532.1930559/1‑94 (MQ=60)
GAATACCGGCGTCCCATCGGCAATCATTCCCAGACCTAACTTGGCAAAGCTGTCACCAATCAGGTAAGCAAAGGTGCCTTTAATACCATCGGCA < SRR4302532.6227269/94‑1 (MQ=60)
GAATACCGGCGTCCCATCGGCAATCATTCCCAGACCTAACTTGGCAAAGCTGTCACCAATCAGGTAAGCAAAGGTGCCTTTAATACCATCGGCA > SRR4302532.4914308/1‑94 (MQ=60)
GAATACCGGCGTCCCATCGGCAATCATTCCCAGACCTAACTTGGCAAAGCTGTCACCAACCAGGTAAGCAAAGGTGCCTTTAATACCATCGGCA < SRR4302532.3649036/94‑1 (MQ=60)
AATACCGGCGTCCCATCGGCAATCATTCCCAGACCTAACTTGGCAAAGCTGTCACCAACCAGGTAAGCAAAGGTGCCTTTAATACCATCGGCAG < SRR4302532.1616756/94‑1 (MQ=60)
ATACCGGCGTCCCATCGGCAATCATTCCCAGACCTAACTTGGTAAAGCTGTCACCAATCAGGTAAGCAAAGGTGCCTTTAATACCATCGGCAGC < SRR4302532.1823184/94‑1 (MQ=60)
TACCGGCGTCCCATCGGCAATCATTCCCAGACCTAACTTGGCAAAGCTGTCACCAACCAGGTAAGCAAAGGTGCCTTTAATACCATCGGCAGCG < SRR4302532.991809/94‑1 (MQ=60)
TACCGGCGTCCCATCGGCAATCATTCCCAGACCTAACTTGGCAAAGCTGTCACCAACCAGGTAAGCAAAGGTGCCTTTAATACCATCGGCAGCG < SRR4302532.625725/94‑1 (MQ=60)
ACCGGCGTCCCATCGGCAATCATTCCCAGACCTAACTTGGCAAAGCTGTCACCAATCAGGTAAGCAAAGGTGCCTTTAATACCATCGGCAGCGC > SRR4302532.4925342/1‑94 (MQ=60)
ACCGGCGTCCCATCGGCAATCATTCCCAGACCTAACTTGGCAAAGCTGTCACCAACCAGGTAAGCAAAGGTGCCTTTAATACCATCGGCAGCGC > SRR4302532.4100947/1‑94 (MQ=60)
ACCGGCGTCCCATCGGCAATCATTCCCAGACCTAACTTGGCAAAGCTGTCACCAACCAGGTAAGCAAAGGTGCCTTTAATACCATCGGCAGCGC > SRR4302532.5701365/1‑94 (MQ=60)
CGGCGTCCCATCGGCAATCATTCCCAGACCTAACTTGGCAAAGCTGTCACCAACCAGGTAAGCAAAGGTGCCTTTAATACCATCGGCAGCGCCA > SRR4302532.3205105/1‑94 (MQ=60)
GGCGTCCCATCGGCAATCATTCCCAGACCTAACTTGGCAAAGCTGTCACCAATCAGGTAAGCAAAGGTGCCTTTAATACCATCGGCAGCGCCAA > SRR4302532.2656028/1‑94 (MQ=60)
CGTCCCATCGGCAATCATTCCCAGACCTAACTTGGCAAAGCTGTCACCAATCAGGTAAGCAAAGGTGCCTTTAATACCATCGGCAGCGCCAATC < SRR4302532.5967584/94‑1 (MQ=60)
CGTCCCATCGGCAATCATTCCCAGACCTAACTTGGCAAAGCTGTCACCAATCAGGTAAGCAAAGGTGCCTTTAATACCATCGGCAGCGCCAATC > SRR4302532.5520357/1‑94 (MQ=60)
CGTCCCATCGGCAATCATTCCCAGACCTAACTTGGCAAAGCTGTCACCAACCAGGTAAGCAAAGGTGCCTTTAATACCATCGGCAGCGCCAATC > SRR4302532.4354613/1‑94 (MQ=60)
CGCCCCATCGGCAATCATTCCCAGACCTAACTTGGCAAAGCTGTCACCAATCAGGTAAGCAAAGGTGCCTTTAATACCATCGGCAGCGCCAATC < SRR4302532.528869/94‑1 (MQ=60)
GTCCCATCGGCAATCATTCCCAGACCTAACTTGGCAAAGCTGTCACCAATCAGGTAAGCAAAGGTGCCTTTAATACCATCGGCAGCGCCAATCG > SRR4302532.3140102/1‑94 (MQ=60)
GTCCCATCGGCAATCATTCCCAGACCTAACTTGGCAAAGCTGTCACCAACCAGGTAAGCAAAGGTGCCTTTAATACCATCGGCAGCGCCAATCG < SRR4302532.3703757/94‑1 (MQ=60)
GTCCCATCGGCAATCATTCCCAGACCTAACTTGGCAAAGCTGTCACCAACCAGGTAAGCAAAGGTGCCTTTAATACCATCGGCAGCGCCAATCG > SRR4302532.3110094/1‑94 (MQ=60)
GTCCCATCGGCAATCATTCCCAGACCTAACTTGGCAAAGCTGTCACCAACCAGGTAAGCAAAGGTGCCTTTAATACCATCGGCAGCGCCAATCG < SRR4302532.3703755/94‑1 (MQ=60)
TCCCATCGGCAATCATTCCCAGACCTAACTTGGCAAAGCTGTCACCAACCAGGTAAGCAAAGGTGCCTTTAATACCATCGGCAGCGCCAATCGC > SRR4302532.596841/1‑94 (MQ=60)
CCCATCGGCAATCATTCCCAGACCTAACTTGGCAAAGCTGTCACCAATCAGGTAAGCAAAGGTGCCTTTAATACCATCGGCAGCGCCAATCGCT > SRR4302532.3899600/1‑94 (MQ=60)
CCCATCGGCAATCATTCCCAGACCTAACTTGGCAAAGCTGTCACCAACCAGGTAAGCAAAGGTGCCTTTAATACCATCGGCAGCGCCAATCGCT > SRR4302532.2939802/1‑94 (MQ=60)
CCCATCGGCAATCATTCCCAGACCTAACTTGGCAAAGCTGTCACCAACCAGGTAAGCAAAGGTGACTTTAATACCATCGGCAGCGCCAATCGCT > SRR4302532.2939800/1‑94 (MQ=60)
CCATCGGCAATCATTCCTAGACCTAACTTGGCAAAGCTGTGACCAATCAGGTAAGCAAAGGTGCCTTTAATACCATCGGCAGCGCCAATCTCTT > SRR4302532.950909/1‑94 (MQ=60)
CATCGGCAATCATTCCCAGACCTAACTTGGCAAAGCTGTCACCAATCAGGTAAGCAAAGGTGCCTTTAATACCATCGGCAGCGCCAATCGCTTT > SRR4302532.5923757/1‑94 (MQ=60)
CATCGGCAATCATTCCCAGACCTAACTTGGCAAAGCTGTCACCAATCAGGTAAGCAAAGGTGCCTTTAATACCATCGGCAGCGCCAATCGCTTT > SRR4302532.4575076/1‑94 (MQ=60)
ATCGGCAATCATTCCCAGACCTAACTTGGCAAAGCTGTCACCAACCAGGTAAGCAAAGGTGCCTTTAATACCATCGGCAGCGCCAATCGCTTTT > SRR4302532.6357303/1‑94 (MQ=60)
TCGGCAATCATTCCCAGACCTAACTTGGCAAAGCTGTCACCAACCAGGTAAGCAAAGGTGCCTTTAATACCATCGGCAGCGCCAATCGCTTTTT < SRR4302532.2364017/94‑1 (MQ=60)
TCGGCAATCACTCCCAGACATAACTGGGAAAAGCTGTCACCAACCAGGTAAGCAAAGGTGCCTTTAATTCCATCGGCAGCGCCAATCGCTTTTT < SRR4302532.5592515/94‑1 (MQ=60)
CGGCAATCATTCCCAGACCTAACTTGGCAAAGCTGTCACCAACCAGGTAAGCAAAGGTGCCTTTAATACCATCGGCAGCGCCAATCGCTTTTTT > SRR4302532.2955840/1‑94 (MQ=60)
GGCAATCATTCCCAGACCTAACTTGGCAAAGCTGTCACCAATCAGGTAAGCAAAGGTGCCTTTAATACCATCGGCAGCGCCAATCGCTTTTTTA > SRR4302532.6185038/1‑94 (MQ=60)
GGCAATCATTCCCAGACCTAACTTGGCAAAGCTGTCACCAATCAGGTAAGCAAAGGTGCCTTTAATACCATCGGCAGCGCCAATCGCTTTTTTA < SRR4302532.3915297/94‑1 (MQ=60)
GCAATCATTCCCAGACCTAACTTGGCAAAGCTGTCACCAACCAGGTAAGCAAAGGTGCCTTTAATACCATCGGCAGTGCCAATCGCTTTTTTAG < SRR4302532.4311376/94‑1 (MQ=60)
CAATCATTCCCAGACCTAACTTGGCAAAGCTGTCACCAACCAGGTAAGCAAAGGTGCCTTTAATACCATCGGCAGCGCCAATCGCTTTTTTAGG > SRR4302532.1092015/1‑94 (MQ=60)
AATCATTCCCAGACCTAACTTGGCAAAGCTGTCACCAATCAGGTAAGCAAAGGTGCCTTTAATACCATCGGCAGCGCCAATCGCTTTTTTAGGT > SRR4302532.1521371/1‑94 (MQ=60)
AATCATTCCCAGACCTAACTTGGCAAAGCTGTCACCAATCAGGTAAGCAAAGGTGCCTTTAATACCATCGGCAGCGCCAATCGCTTTTTTAGGT > SRR4302532.5329638/1‑94 (MQ=60)
AATCATTCCCAGACCTAACTTGGCAAAGCTGTCACCAACCAGGTAAGCAAAGGTGCCTTTAATACCATCGGCAGCGCCAATCGCTTTTTTAGGT > SRR4302532.1629280/1‑94 (MQ=60)
ATCATTCCCAGACCTAACTTGGCAAAGCTGTCACCAACCAGGTAAGCAAAGGTGCCTTTAATACCATCGGCAGCGCCAATCGCTTTTTTAGGTA < SRR4302532.5351896/94‑1 (MQ=60)
TCATTCCCAGACCTAACTTGGCAAAGCTGTCACCAATCAGGTAAGCAAAGGTGCCTTTAATACCATCGGCAGCGCCAATCGCTTTTTTAGGTAC > SRR4302532.5747603/1‑94 (MQ=60)
TTCCCAGACCTAACTTGGCAAAGCTGTCACCAACCAGGTAAGCAAAGGTGCCTTTAATACCATCGGCAGCGCCAATCGCTTTTTTAGGTACAAA < SRR4302532.3799898/94‑1 (MQ=60)
TCCCAGACCTAACTTGGCAAAGCTGTCACCAATCAGGTAAGCAAAGGTGCCTTTAATACCATCGGCAGCGCCAATCGCTTTTTTAGGTACAAAG < SRR4302532.6302799/94‑1 (MQ=60)
TCCCAGACCTAACTTGGCAAAGCTGTCACCAATCAGGTAAGCAAAGGTGCCTTTAATACCATCGGCAGCGCCAATCGCTTTTTTAGGTACAAAG > SRR4302532.2861760/1‑94 (MQ=60)
TCCCAGACCTAACTCGGCAAAGCTGTCACCAACCAGGTAAGCAAAGGTGCCTTTAATACCAGCGGCAGCGCCAATCGCTTTTTTAGGTACAAAG < SRR4302532.2704419/94‑1 (MQ=60)
CCCAGACCTAACTTGGCAAAGCTGTCACCAATCAGGTAAGCAAAGGTGCCTTTAATACCATCGGCAGCGCCAATCGCTTTTTTAGGTACAAAGC > SRR4302532.4085762/1‑94 (MQ=60)
CCCAGACCTAACTTGGCAAAGCTGTCACCAATCAGGTAAGCAAAGGTGCCTTTAATACCATCGGCAGCGCCAATCGCTTTTTTAGGTACAAAGC > SRR4302532.4058114/1‑94 (MQ=60)
CCAGACCTAACTTGGCAAAGCTGTCACCAACCAGGTAAGCAAAGGTGCCTTTAATACCATCGGCAGCGCCAATCGCTTTTTTAGGTACAAAGCC < SRR4302532.4892368/94‑1 (MQ=60)
AGACCTAACTTGGCAAAGCTGTCACCAACCAGGTAAGCAAAGGTGCCTTTAATACCATCGGCAGCGCCAATCGCTTTTTTAGGTACAAAGCCAA < SRR4302532.5302697/94‑1 (MQ=60)
GACCTAACTTGGCAAAGCTGTCACCAACCAGGTAAGCAAAGGTGCCTTTAATACCATCGGCAGCGCCAATCGCTTTTTTAGGTACAAAGCCAAC < SRR4302532.82689/94‑1 (MQ=60)
GACCTAACTTGGCAAAGCTGTCACCAACCAGGTAAGCAAAGGTGCCTTTAATACCATCGGCAGCGCCAATCGCTTTTTTAGGTACAAAGCCAAC < SRR4302532.4075985/94‑1 (MQ=60)
ACCTAACTTGGCAAAGCTGTCACCAACCAGGTAAGCAAAGGTGCCTTTAATACCATCGGCAGCGCCAATCGCTTTTTTAGGTACAAAGCCAACA > SRR4302532.502541/1‑94 (MQ=60)
ACCTAACTTGGCAAAGCTGTCACCAACCAGGTAAGCAAAGGTGCCTTTAATACCATCGGCAGCGCCAATCGCTTTTTTAGGTACAAAGCCAACA < SRR4302532.5392844/94‑1 (MQ=60)
CTAACTTGGCAAAGCTGTCACCAATCAGGTAAGCAAAGGTGCCTTTAATACCATCGGCAGCGCCAATCGCTTTTTTAGGTACAAAGCCAACAGC > SRR4302532.4319127/1‑94 (MQ=60)
CTAACTTGGCAAAGCTGTCACCAACCAGGTAAGCAAAGGTGCCTTTAATACCATCGGCAGCGCCAATCGCTTTTTTAGGTACAAAGCCAACAGC < SRR4302532.1642240/94‑1 (MQ=60)
TAACTTGGGAAGGCTATCACCAGTCAGGTAAGCAAAGGTGCCCTTAATAACATCGGCAGCCCCAATCGCTTTTTTcggttcaaccacatcagca > SRR4302532.3845655/1‑75 (MQ=41)
AACTTGGCAAAGCTGTCACCAACCAGGTAAGCAAAGGTGCCTTTAATACCATCGGCAGCGCCAATCGCTTTTTTAGGTACAAAGCCAACAGCAG < SRR4302532.6357988/94‑1 (MQ=60)
CTTGGCAAAGCTGTCACCAACCAGGTAAGCAAAGGTGCCTTTAATACCATCGGCAGCGCCAATCGCTTTTTTAGGTACAAAGCCAACAGCAGCC > SRR4302532.2083961/1‑94 (MQ=60)
TTGGCAAAGCTGTCACCAACCAGGTAAGCAAAGGTGCCTTTAATACCATCGGCAGCGCCAATCGCTTTTTTAGGTACAAAGCCAACAGCAGCCA < SRR4302532.409410/94‑1 (MQ=60)
GGCAAAGCTGTCACCAACCAGGTAAGCAAAGGTGCCTTTAATACCATCGGCAGCGCCAATCGCTTTTTTAGGTACAAAGCCAACAGCAGCCACA > SRR4302532.3457172/1‑94 (MQ=60)
GCAAAGCTGTCACCAATCAGGTAAGCAAAGGTGCCTTTAATACCATCGGCAGCGCCAATCGCTTTTTTAGGTACAAAGCCAACAGCAGCCACAC > SRR4302532.3661866/1‑94 (MQ=60)
GCAAAGCTGTCACCAATCAGGTAAGCAAAGGTGCCTTTAATACCATCGGCAGCGCCAATCGCTTTTTTAGGTACAAAGCCAACAGCAGCCACAC > SRR4302532.2031669/1‑94 (MQ=60)
CAAAGCTGTCACCAACCAGGTAAGCAAAGGTGCCTTTAATACCATCGGCAGCGCCAATCGCTTTTTTAGGTACAAAGCCAACAGCAGCCACACC < SRR4302532.1049951/94‑1 (MQ=60)
CAAAGCTGTCACCAACCAGGTAAGCAAAGGTGCCTTTAATACCATCGGCAGCGCCAATCGCTTTTTTAGGTACAAAGCCAACAGCAGCCACACC > SRR4302532.6171328/1‑94 (MQ=60)
CAAAGCTGTCACCAACCAGGTAAGCAAAGGTGCCTTTAATACCATCGGCAGCGCCAATCGCTTTTTTAGGTACAAAGCCAACAGCAGCCACACC < SRR4302532.1125841/94‑1 (MQ=60)
AAAGCTGTCACCAACCAGGTAAGCAAAGGTGCCTTTAATACCATCGGCAGCGCCAATCGCTTTTTTAGGTACAAAGCCAACAGCAGCCACACCA < SRR4302532.5992206/94‑1 (MQ=60)
AAGCTGTCACCAATCAGGTAAGCAAAGGTGCCTTTAATACCATCGGCAGCGCCAATCGCTTTTTTAGGTACAAAGCCAACAGCAGCCACACCAA > SRR4302532.5562616/1‑94 (MQ=60)
AAGCTGTCACCAATCAGGTAAGCAAAGGTGCCTTTAATACCATCGGCAGCGCCAATCGCTTTTTTAGGTACAAAGCCAACAGCAGCCACACCAA > SRR4302532.5278265/1‑94 (MQ=60)
AAGCTGTCACCAATCAGGTAAGCAAAGGTGCCTTTAATACCATCGGCAGCGCCAATCGCTTTTTTAGGTACAAAGCCAACAGCAGCCACACCAA > SRR4302532.4226289/1‑94 (MQ=60)
AAGCTGTCACCAACCAGGTAAGCAAAGGTGCCTTTAATACCATCGGCAGCGCCAATCGCTTTTTTAGGTACAAAGCCAACAGCAGCCACACCAA < SRR4302532.2335873/94‑1 (MQ=60)
AAGCTGTCACCAACCAGGTAAGCAAAGGTGCCTTTAATACCATCGGCAGCGCCAATCGCTTTTTTAGGTACAAAGCCAACAGCAGCCACACCAA > SRR4302532.2841368/1‑94 (MQ=60)
AGCTGTCACCAATCAGGTAAGCAAAGGTGCCTTTAATACCATCGGCAGCGCCAATCGCTTTTTTAGGTACAAAGCCAACAGCAGCCACACCAAT > SRR4302532.587177/1‑94 (MQ=60)
CTGTCACCAATCAGGTAAGCAAAGGTGCCTTTAATACCATCGGCAGCGCCAATCGCTTTTTTAGGTACAAAGCCAACAGCAGCCACACCAATCA > SRR4302532.1183615/1‑94 (MQ=60)
CTGTACCCAATCAGGTAAGCAAAGGTGCCTTTAATACCATCGCCAGCGCCAATCGCTTTTTTAGGTACAAAGCCAACAGCAGCCACACCAATCA < SRR4302532.3787304/94‑1 (MQ=60)
GTCACCAATCAGGTAAGCAAAGGTGCCTTTAATACCATCGGCAGCGCCAATCGCTTTTTTAGGTACAAAGCCAACAGCAGCCACACCAATCAAC < SRR4302532.3960856/94‑1 (MQ=60)
GTCACCAACCAGGTAAGCAAAGGTGCCTTTAATACCATCGGCAGCGCCAATCGCTTTTTTAGGTACAAAGCCAACAGCAGCCACACCAATCAAC < SRR4302532.3443503/94‑1 (MQ=60)
GTCACCAACCAGGTAAGCAAAGGTGCCTTTAATACCATCGGCAGCGCCAATCGCTTTTTTAGGTACAAAGCCAACAGCAGCCACACCAATCAAA > SRR4302532.718151/1‑94 (MQ=60)
CACCAATCAGGTAAGCAAAGGTGCCTTTAATACCATCGGCAGCGCCAATCGCTTTTTTAGGTACAAAGCCAACAGCAGCCACACCAATCAACAA > SRR4302532.3450412/1‑94 (MQ=60)
CACCAACCAGGTAAGCAAAGGTGCCTTTAATACCATCGGCAGCGCCAATCGCTTTTTTAGGTACAAAGCCAACAGCAGCCACACCAATCAACAA > SRR4302532.1553244/1‑94 (MQ=60)
CCAATCAGGTAAGCAAAGGTGCCTTTAATACCATCGGCAGCGCCAATCGCTTTTTTAGGTACAAAGCCAACAGCAGCCACACCAATCAACAATT < SRR4302532.5473156/94‑1 (MQ=60)
CCAATCAGGTAAGCAAAGGTGCCTTTAATACCATCGGCAGCGCCAATCGCTTTTTTAGGTACAAAGCCAACAGCAGCCACACCAATCAACAATT < SRR4302532.2316434/94‑1 (MQ=60)
CCAACCAGGTAAGCAAAGGTGCCTTTAATACCATCGGCAGCGCCAATCGCTTTTTTAGGTACAAAGCCAACAGCAGCCACACCAATCAACAATT < SRR4302532.3435352/94‑1 (MQ=60)
CCAACCAGGTAAGCAAAGGTGCCTTTAATACCATCGGCAGCGCCAATCGCTTTTTTAGGTACAAAGCCAACAGCAGCCACACCAATCAACAATT < SRR4302532.5393539/94‑1 (MQ=60)
CAATCAGGTAAGCAAAGGTGCCTTTAATACCATCGGCAGCGCCAATCGCTTTTTTAGGTACAAAGCCAACAGCAGCCACACCAATCAACAATTG < SRR4302532.5899793/94‑1 (MQ=60)
CAACCAGGTAAGCAAAGGTGCCTTTAATACCATCGGCAGCGCCAATCGCTTTTTTAGGTACAAAGCCAACAGCAGCCACACCAATCAACAATTG > SRR4302532.57996/1‑94 (MQ=60)
AATCAGGTAAGCAAAGGTGCCTTTAATACCATCGGCAGCGCCAATCGCTTTTTTAGGTACAAAGCCAACAGCAGCCACACGAATCAACAATTGC > SRR4302532.1275718/1‑94 (MQ=60)
AACCAGGTAAGCAAAGGTGCCTTTAATACCATCGGCAGCGCCAATCGCTTTTTTAGGTACAAAGCCAACAGCAGCCACACCAATCAACAATTGC > SRR4302532.2225622/1‑94 (MQ=60)
AACCAGGTAAGCAAAGGTGCCTTTAATACCATCGGCAGCGCCAATCGCTTTTTTAGGTACAAAGCCAACAGCAGCCACACCAATCAACAATTGC < SRR4302532.3146154/94‑1 (MQ=60)
AACCAGGTAAGCAAAGGTGCCTTTAATACCATCGGCAGCGCCAATCGCTTTTTTAGGTACAAAGCCAACAGCAGCCACACCAATCAACAATTGC < SRR4302532.1096875/94‑1 (MQ=60)
ATCAGGTAAGCAAAGGTGCCTTTAATACCATCGGCAGCGCCAATCGCTTTTTTAGGTACAAAGCCAACAGCAGCCACACCAATCAACAATTGCG > SRR4302532.282867/1‑94 (MQ=60)
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GGCGAAGGTGCCTGCCCAGCCGGTAAGGCCGAATACCGGCGTCCCATCGGCAATCATTCCCAGACCTAACTTGGCAAAGCTGTCACCAATCAGGTAAGCAAAGGTGCCTTTAATACCATCGGCAGCGCCAATCGCTTTTTTAGGTACAAAGCCAACAGCAGCCACACCAATCAACAATTGCG > NC_000913/3843514‑3843695
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
