Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
593 |
264.2 |
13311096 |
97.8% |
13018251 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
1,810,386 |
C→T |
T261T (ACG→ACA) |
b1730 ← |
hypothetical protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 1,810,386 | 0 | C | T | 84.1%
| 584.6
/ 71.9
| 208 | T261T (ACG→ACA) | b1730 | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base C (16/17); new base T (90/85); total (106/102) |
| Fisher's exact test for biased strand distribution p-value = 8.50e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 213 total aligned reads displayed.
AAACCGATAAAGCCATTCTGGATAGCGAAGACGACGCCGAACTGGCACACCATTAATTCTTATGCTGGCAACGGTCCGTTTTGTATAGGGGCCGTTGCCTTACTTTTTAAATGTTCCATCGCGGCGATGCATACTGACTCATATTTAAACAGATCGTCAGCGAAAAAAATGTCCAACTTATC > NC_000913/1810294‑1810475
|
aaaCCGATAAAGCCATTCTGGATAGCGAAGACGACGCCGAACTGGCACACCATTAATTCTTATGCTGGCAACGGTCCGTTTTGTATAGGGGcc > 2:3358346/1‑93 (MQ=255)
aCCGATAAAGCCATTCTGGATAGCGAAGACGACGCCGAACTGGCACACCATTAATTCTTATGCTGGCAACGGTCCGTTTTGTATAGGGGCTGt > 2:1766356/1‑93 (MQ=255)
aCCGATAAAGCCATTCTGGATAGCGAAGACGACGCCGAACTGGCACACCATTAATTCTTATGCTGGCAACGGTCCGTTTTGTATAGGGGCTGt < 2:2745965/93‑1 (MQ=255)
ccGATAAAGCCATTCTGGATAGCGAAGACGACGCCGAACTGGCACACCATTAATTCTTATGCTGGCAACGGTCCGTTTTGTATAGGGGCTGtt < 2:5781751/93‑1 (MQ=255)
ccGATAAAGCCATTCTGGATAGCGAAGACGACGCCGAACTGGCACACCATTAATTCTTATGCTGGCAACGGTCCGTTTTGTATAGGGGCTGtt > 2:134475/1‑93 (MQ=255)
cGATAAAGCCATTCTGGATAGCGAAGACGACGCCGAACTGGCACACCATTAATTCTTATGCTGGCAACGGTCCGTTTTGTATAGGGGCTGTTg > 2:5476893/1‑93 (MQ=255)
gATAAAGCCATTCTGGATAGCGAAGACGACGCCGAACTGGCACACCATTAATTCTTATGCTGGCAACGGTCCGTTTTGTATAGGGGCTGTTGc > 1:4253257/1‑93 (MQ=255)
gATAAAGCCATTCTGGATAGCGAAGACGACGCCGAACTGGCACACCATTAATTCTTATGCTGGCAACGGTCCGTTTTGTATAGGGGCTGTTGc > 1:5561568/1‑93 (MQ=255)
gATAAAGCCATTCTGGATAGCGAAGACGACGCCGAACTGGCACACCATTAATTCTTATGCTGGCAACGGTCCGTTTTGTATAGAGGCTGTTGc > 1:6602650/1‑93 (MQ=255)
tAAAGCCATTCTGGATAGCGAAGACGACGCCGAACTGGCACACCATTAATTCTTATGCTGGCAACGGTCCGTTTTGTATAGGGGCTGTTGCCt < 1:6158672/93‑1 (MQ=255)
tAAAGCCATTCTGGATAGCGAAGACGACGCCGAACTGGCACACCATTAATTCTTATGCTGGCAACGGTCCGTTTTGTATAGGGGCCGTTGCCt > 1:4419416/1‑93 (MQ=255)
aaGCCATTCTGGATAGCGAAGACGACGCCGAACTGGCACACCATTAATTCTTATGCTGGCAACGGTCCGTTTTGTATAGGGGCCGTTGCCTTa > 1:1910158/1‑93 (MQ=255)
aGCCATTCTGGATAGCGAAGACGACGCCGAACTGGCACACCATTAATTCTTATGCTGGCAACGGTCCGTTTTGTATAGGGGCTGTTGCCTTAc > 1:3101734/1‑93 (MQ=255)
aGCCATTCTGGATAGCGAAGACGACGCCGAACTGGCACACCATTAATTCTTATGCTGGCAACGGTCCGTTTTGTATAGGGGCTGTTGCCTTAc > 1:3680222/1‑93 (MQ=255)
gCCATTCTGGATAGCGAAGACGACGCCGAACTGGCACACCATTAATTCTTATGCTGGCAACGGTCCGTTTTGTATAGGGGCTGTTGCCTTACt > 1:2866647/1‑93 (MQ=255)
tCTGGATAGCGAAGACGACGCCGAACTGGCACACCATTAATTCTTATGCTGGCAACGGTCCGTTTTGTATAGGGGCTGTTGCCTTACTTTTTa < 1:4887989/93‑1 (MQ=255)
ggATAGCGAAGACGACGCCGAACTGGCACACCATTAATTCTTATGCTGGCAACGGTCCGTTTTGTATAGGGGCTGTTGCCTTACTTTTTAAAt < 2:1652775/93‑1 (MQ=255)
ggATAGCGAAGACGACGCCGAACTGGCACACCATTAATTCTTATGCTGGCAACGGTCCGTTTTGTATAGGGGCTGTTGCCTTACTTTTTAAAt < 2:6373309/93‑1 (MQ=255)
ggATAGCGAAGACGACGCCGAACTGGCACACCATTAATTCTTATGCTGGCAACGGTCCGTTTTGTATAGGGGCTGTTGCCTTACTTTTTAAAt < 1:4554855/93‑1 (MQ=255)
gATAGCGAAGACGACGCCGAACTGGCACACCATTAATTCTTATGCTGGCAACGGTCCGTTTTGTATAGGGGCTGTTGCCTTACTTTTTAAATg < 1:410489/93‑1 (MQ=255)
aTAGCGAAGACGACGCCGAACTGGCACACCATTAATTCTTATGCTGGCAACGGTCCGTTTTGTATAGGGGCTGTTGCCTTACTTTTTAAATGt > 2:4268433/1‑93 (MQ=255)
aGCGAAGACGACGCCGAACTGGCACACCATTAATTCTTATGCTGGCAACGGTCCGTTTTGTATAGGGGCTGTTGCCTTACTTTTTAAATGTTc < 1:5545951/93‑1 (MQ=255)
gCGAAGACGACGCCGAACTGGCACACCATTAATTCTTATGCTGGCAACGGTCCGTTTTGTATAGGGGCTGTTGCCTTACTTTTTAAATGTTcc > 1:3764517/1‑93 (MQ=255)
gCGAAGACGACGCCGAACTGGCACACCATTAATCCTTATGCTGGCAACGGTCCGTTTTGTATAGGGGCTGTTGCCTTACTTTTTAAATGTTcc > 2:4301517/1‑93 (MQ=255)
cGAAGACGACGCCGAACTGGCACACCATTAATGCTTATGCTGGCAACGGTCCGTTTTGTATAGGGGCCGTTGCCTTACTTTTTAAATGTTCCa < 1:2641111/93‑1 (MQ=255)
gAAGACGACGCCGAACTGGCACACCATTAATTCTTATGCTGGCAACGGTCCGTTTTGTATAGGGGCTGTTGCCTTACTTTTTAAATGTTCCAt > 1:5511303/1‑93 (MQ=255)
gAAGACGACGCCGAACTGGCACACCATTAATTCTTATGCTGGCAACGGTCCGTTTTGTATAGGGGCTGTTGCCTTACTTTTTAAATGTTCCAt > 1:1596063/1‑93 (MQ=255)
gAAGACGACGCCGAACTGGCACACCATTAATTCTTATGCTGGCAACGGTCCGTTTTGTATAGGGGATGTTGCCTTATTTTTTAAATGTTCCAt > 2:4139395/1‑93 (MQ=255)
aaGACGACGCCGAACTGGCACACCATTAATTCTTATGCTGGCAACGGTCTGTTTTGTATAGGGGCTGTTGCCTTACTTTTTAAATGTTCCATc > 2:6435569/1‑93 (MQ=255)
aaGACGACGCCGAACTGGCACACCATTAATTCTTATGCTGGCAACGGTCCGTTTTGTATAGGGGCTGTTGCCTTACTTTTTAAATGTTCCATc > 1:677802/1‑93 (MQ=255)
aaGACGACGCCGAACTGGCACACCATTAATTCTTATGCTGGCAACGGTCCGTTTTGTATAGGGGCTGTTGCCTTACTTTTTAAATGTTCCATc > 2:4993999/1‑93 (MQ=255)
aaGACGACGCCGAACTGGCACACCATTAATTCTTATGCTGGCAACGGTCCGTTTTGTATAGGGGCTGTTGCCTTACTTTTTAAATGTTCCATc < 1:1378188/93‑1 (MQ=255)
aaGACGACGCCGAACTGGCACACCATTAATTCTTATGCTGGCAACGGTCCGTTTTGTATAGGGGCCGTTGCCTTACTTTTTAAATGTTCCATc > 2:4157024/1‑93 (MQ=255)
gacgacGCCGAACTGGCACACCATTAATTCTTATGCTGGCAACGGTCCGTTTTGTATAGGGGCCGTTGCCTTACTTTTTAAATGTTCCATcgc > 2:1291418/1‑93 (MQ=255)
cgacgCCGAACTGGCACACCATTAATTCTTATGCTGGCAACGGTCCGTTTTGTATAGGGGCTGTTGCCTTACTTTTTAAATGTTCCATCgcgg < 2:1414052/93‑1 (MQ=255)
acgCCGAACTGGCACACCATTAATTCTTATGCTGGCAACGGTCCGTTTTGTATAGGGGCTGTTGCCTTACTTTTTAAATGTTCCATCgcggcg > 1:3880875/1‑93 (MQ=255)
cgCCGAACTGGCACACCATTAATTCTTATGCTGGCAACGGTCCGTTTTGTATAGGGGCTGTTGCCTTACTTTTTAAATGTTCCATCGCGGCGa < 2:2548584/93‑1 (MQ=255)
ccGAACTGGCACACCATTAATTCTTATGCTGGCAACGGTCCGTTTTGTATAGGGGCTGTTGCCTTCCTTTTTAAATGTTCCATCGCGGCGATg > 1:363160/1‑93 (MQ=255)
ccGAACTGGCACACCATTAATTCTTATGCTGGCAACGGTCCGTTTTGTATAGGGGCTGTTGCCTTACTTTTTAAATGTTCCATCGCGGCGATg < 2:399813/93‑1 (MQ=255)
ccGAACTGGCACACCATTAATTCTTATGCTGGCAACGGTCCGTTTTGTATAGGGGCTGTTGCCTTACTTTTTAAATGTTCCATCGCGGCGATg > 2:4488055/1‑93 (MQ=255)
ccGAACTGGCACACCATTAATTCTTATGCTGGCAACGGTCCGTTTTGTATAGGGGCTGTTGCCTTACTTTTTAAATGTTCCATCGCGGCGATg > 2:812365/1‑93 (MQ=255)
ccGAACTGGCACACCATTAATTCTTATGCTGGCAACGGTCCGTTTTGTATAGGGGCTGTTGCCTTACTTTTTAAATGTTCCATCGCGGCGATg > 1:1712544/1‑93 (MQ=255)
ccGAACTGGCACACCATTAATTCTTATGCTGGCAACGGTCCGTTTTGTATAGGGGCTGTTGCCTTACTTTTTAAATGTTCCATCGCGGCGATg > 1:3527669/1‑93 (MQ=255)
aaCTGGCACACCATTAATTCTTATGCTGGCAACGGTCCGTTTTGTATAGGGGCTGTTGCCTTACTTTTTAAATGTTCCATCGCGGCGATGCAt < 2:5361810/93‑1 (MQ=255)
aCTGGCACACCATTAATTCTTATGCTGGCAACGGTCCGTTTTGTATAGGGGCTGTTGCCTTACTTTTTAAATGTTCCATCGCGGCGATGCATa > 2:6240497/1‑93 (MQ=255)
cTGGCACACCATTAATTCTTATGCTGGCAACGGTCCGTTTTGTATAGGGGCTGTTGCCTTACTTTTTAAATGTTCCATCGCGGCGATGCATAc > 1:2280103/1‑93 (MQ=255)
cTGGCACACCATTAATTCTTATGCTGGCAACGGTCCGTTTTGTATAGGGGCTGTTGCCTTACTTTTTAAATGTTCCATCGCGGCGATGCATAc < 1:4195216/93‑1 (MQ=255)
acacCATTAATTCTTATGCTGGCAACGGTCCGTTTTGTATAGGGGCTGTTGCCTTACTTTTTAAATGTTCCATCGCGGCGATGCATACTGACt > 1:261243/1‑93 (MQ=255)
acacCATTAATTCTTATGCTGGCAACGGTCCGTTTTGTATAGGGGCTGTTGCCTTACTTTTTAAATGTTCCATCGCGGCGATGCATACTGACt > 1:3033419/1‑93 (MQ=255)
cacCATTAATTCTTATGCTGGCAACGGTCCGTTTTGTATAGGGGCTGTTGCCTTACTTTTTAAATGTTCCATCGCGGCGATGCATACTGACTc > 1:6075627/1‑93 (MQ=255)
cATTAATTCTTATGCTGGCAACGGTCCGTTTTGTATAGGGGCTGTTGCCTTACTTTTTAAATGTTCCATCGCGGCGATGCATACTGACTCata < 2:723422/93‑1 (MQ=255)
cATTAATTCTTATGCTGGCAACGGTCCGTTTTGTATAGGGGCTGTTGCCTTACTTTTTAAATGTTCCATCGCGGCGATGCATACTGACTCata > 2:527737/1‑93 (MQ=255)
cATTAATTCTTATGCTGGCAACGGTCCGTTTTGTATAGGGGCTGTTGCCTTACTTTTTAAATGTTCCATCGCGGCGATGCATACTGACTCata > 2:2351663/1‑93 (MQ=255)
aTTAATTCTTATGCTGGCAACGGTCCGTTTTGTATAGGGGCTGTTGCCTTACTTTTTAAATGTTCCATCGCGGCGATGCATACTGACTCatat > 2:2038229/1‑93 (MQ=255)
aaTTCTTATGCTGGCAACGGTCCGTTTTGTATAGGGGCTGTTGCCTTACTTTTTAAATGTTCCATCGCGGCGATGCATACTGACTCATATTTa < 2:4647519/93‑1 (MQ=255)
aTTCTTATGCTGGCAACGGTCCGTTTTGTATAGGGGCTGTTGCCTTACTTTTTAAATGTTCCATCGCGGCGATGCATACTGACTCATATTTaa < 2:4948197/93‑1 (MQ=255)
aTTCTTATGCTGGCAACGGTCCGTTTTGTATAGGGGCTGTTGCCTTACTTTTTAAATGTTCCATCGCGGCGATGCATACTGACTCATATTTaa > 2:6608133/1‑93 (MQ=255)
aTTCTTATGCTGGCAACGGTCCGTTTTGTATAGGGGCCGTTGCCTTACTTTTTAAATGTTCCATCGCGGCGATGCATACTGACTCATATTTaa > 2:4898519/1‑93 (MQ=255)
ttCTTATGCTGGCAACGGTCCGTTTTGTATAGGGGCTGTTGCCTTACTTTTTAAATGTTCCATCGCGGCGATGCATACTGACTCATATTTaaa > 1:5274021/1‑93 (MQ=255)
cTTATGCTGGCAACGGTCCGTTTTGTATAGGGGCTGTTGCCTTACTTTTTAAATGTTCCATCGCGGCGATGCATACTGACTCATATTTAAACa > 2:100593/1‑93 (MQ=255)
cTTATGCTGGCAACGGTCCGTTTTGTATAGGGGCCGTTGCCTTACTTTTTAAATGTTCCATCGCGGCGATGCATACTGACTCATATTTAAACa < 2:2982328/93‑1 (MQ=255)
tATGCTGGCAACGGTCCGTTTTGTATAGGGGCCGTTGCCTTACTTTTTAAATGTTCCATCGCGGCGATGCATACTGACTCATATTTAAACAGa < 1:1041592/93‑1 (MQ=255)
tATGCTGGCAACGGTCCGTTTTGTATAGGGGCCGTTGCCTTACTTTTTAAATGTTCCATCGCGGCGATGCATACTGACTCATATTTAAACAGa < 2:3669809/93‑1 (MQ=255)
aTGCTGGCAACGGTCCGTTTTGTATAGGGGCTGTTGCCTTACTTTTTAAATGTTCCATCGCGGCGATGCATACTGACTCATATTTAAACAGAt < 2:4525134/93‑1 (MQ=255)
aTGCTGGCAACGGTCCGTTTTGTATAGGGGCTGTTGCCTTACTTTTTAAATGTTCCATCGCGGCGATGCATACTGACTCATATTTAAACAGAt < 1:2513019/93‑1 (MQ=255)
aTGCTGGCAACGGTCCGTTTTGTATAGGGGCTGTTGCCTTACTTTTTAAATGTTCCATCGCGGCGATGCATACTGACTCATATTTAAACAGAt < 1:2577670/93‑1 (MQ=255)
tGCTGGCAACGGTCCGTTTTGTATAGGGGCTGTTGCCTTACTTTTTAAATGTTCCATCGCGGCGATGCATACTGACTCATATTTAAACAGATc > 2:3616777/1‑93 (MQ=255)
tGCTGGCAACGGTCCGTTTTGTATAGGGGCTGTTGCCTTACTTTTTAAATGTTCCATCGCGGCGATGCATACTGACTCATATTTAAACAGATc > 1:1987142/1‑93 (MQ=255)
tGCTGGCAACGGTCCGTTTTGTATAGGGGCCGTTGCCTTACTTTTTAAATGTTCCATCGCGGCGATGCATACTGACTCATATTTAAACAGATc < 2:2369434/93‑1 (MQ=255)
cTGGCAACGGTCCGTTTTGTATAGGGGCTGTTGCCTTACTTTTTAAATGTTCCATCGCGGCGATGCATACTGACTCATATTTAAACAGATCGt < 2:5607924/93‑1 (MQ=255)
tGGCAACGGTCCGTTTTGTATAGGGGCTGTTGCCTTACTTTTTAAATGTTCCATCGCGGCGATGCATACTGACTCATATTTAAACAGATCGTc > 2:3501028/1‑93 (MQ=255)
tGGCAACGGTCCGTTTTGTATAGGGGCTGTTGCCTTACTTTTTAAATGTTCCATCGCGGCGATGCATACTGACTCATATTTAAACAGATCGTc > 1:2902471/1‑93 (MQ=255)
tGGCAACGGTCCGTTTTGTATAGGGGCCGTTGCCTTACTTTTTAAATGTTCCATCGCGGCGATGCATACTGACTCATATTTAAACAGATCGTc > 2:4180736/1‑93 (MQ=255)
gCAACGGTGCGTTTTGTATAGGGGCTGTTGCCTTACTTTTTAAATGTTCCATCGCGGCGATGCATACTGACTCATATTTAAACAGATCGTCAg < 1:1875940/93‑1 (MQ=255)
gCAACGGTCCGTTTTGTATAGGGGCTGTTGCCTTACTTTTTAAATGTTCCATCGCGGCGATGCATACTGACTCATATTTAAACAGATCGTCAg < 1:2392750/93‑1 (MQ=255)
gCAACGGTCCGTTTTGTATAGGGGCTGTTGCCTTACTTTTTAAATGTTCCATCGCGGCGATGCATACTGACTCATATTTAAACAGATCGTCAg > 2:6552466/1‑93 (MQ=255)
cAACGGTCCGTTTTGTATAGGGGCTGTTGCCTTACTTTTTAAATGTTCCATCGCGGCGATGCATACTGACTCATATTTAAACAGATCGTCAGc > 2:4751001/1‑93 (MQ=255)
cAACGGTCCGTTTTGTATAGGGGCTGTTGCCTTACTTTTTAAATGTTCCATCGCGGCGATGCATACTGACTCATATTTAAACAGATCGTCAGc < 2:3097709/93‑1 (MQ=255)
aCGGTCCGTTTTGTATAGGGGCCGTTGCCTTACTTTTTAAATGTTCCATCGCGGCGATGCATACTGACTCATATTTAAACAGATCGTCAGCGa > 2:5494798/1‑93 (MQ=255)
ggTCCGTTTTGTATAGGGGCTGTTGCCTTACTTTTTAAATGTTCCATCGCGGCGATGCATACTGACTCATATTTAAACAGATCGTCAGCGaaa < 1:871551/93‑1 (MQ=255)
gTCCGTTTTGTATAGGGGCTGTTGCCTTACTTTTTAAATGTTCCATCGCGGCGATGCATACTGACTCATATTTAAACAGATCGTCAGCGaaaa < 2:4864866/93‑1 (MQ=255)
tCCGTTTTGTATAGGGGCTGTTGCCTTACTTTTTAAATGTTCCATCGCGGCGATGCATACTGACTCATATTTAAACAGATCGTCAGCGaaaaa > 2:5190243/1‑93 (MQ=255)
ccGTTTTGTATAGGGGCTGTTGCCTTACTTTTTAAATGTTCCATCGCGGCGATGCATACTGACTCATATTTAAACAGATCGTCAGCGaaaaaa > 1:2538208/1‑93 (MQ=255)
ttttGTATAGGGGCTGTTGCCTTACTTTTTAAATGTTCCATCGCGGCGATGCATACTGACTCATATTTAAACAGATCGTCAGCGAAAAAAATg < 2:4545774/93‑1 (MQ=255)
ttGTATAGGGGCTGTTGCCTTACTTTTTAAATGTTCCATCGCGGCGATGCATACTGACTCATATTTAAACAGATCGTCAGCGAAAAAAATGTc > 1:2128292/1‑93 (MQ=255)
tGTATAGGGGCTGTTGCCTTACTTTTTAAATGTTCCATCGCGGCGATGCATACTGACTCATATTTAAACAGATCGTCAGCGAAAAAAATGTcc < 2:505394/93‑1 (MQ=255)
gTATAGGGGCTGTTGCCTTACTTTTTAAATGTTCCATCGCGGCGATGCATACTGACTCATATTTAAACAGATCGTCAGCGAAAAAAATGTCCa < 1:1018958/93‑1 (MQ=255)
taGGGGCTGTTGCCTTACTTTTTAAATGTTCCATCGCGGCGATGCATACTGACTCATATTTAAACAGATCGTCAGCGAAAAAAATGTCCAACt < 2:3961049/93‑1 (MQ=255)
taGGGGCTGTTGCCTTACTTTTTAAATGTTCCATCGCGGCGATGCATACTGACTCATATTTAAACAGATCGTCAGCGAAAAAAATGTCCAACt > 2:517399/1‑93 (MQ=255)
aGGGGCTGTTGCCTTACTTTTTAAATGTTCCATCGCGGCGATGCATACTGACTCATATTTAAACAGTTCGTCAGCGAAAAAAATGTCCAACtt < 1:987241/93‑1 (MQ=255)
aGGGGCTGTTGCCTTACTTTTTAAATGTTCCATCGCGGCGATGCATACTGACTCATATTTAAACAGATCGTCAGCGAAAAAAATGTCCAACtt > 2:1545652/1‑93 (MQ=255)
aGGGGCTGTTGCCTTACTTTTTAAATGTTCCATCGCGGCGATGCATACTGACTCATATTTAAACAGATCGTCAGCGAAAAAAATGTCCAACtt > 2:734843/1‑93 (MQ=255)
ggggCTGTTGCCTTACTTTTTAAATGTTCCATCGCGGCGATGCATACTGACTCATATTTAAACAGATCGTCAGCGAAAAAAATGTCCAACTTa < 1:3254817/93‑1 (MQ=255)
ggggCTGTTGCCTTACTTTTTAAATGTTCCATCGCGGCGATGCATACTGACTCATATTTAAACAGATCGTCAGCGAAAAAAATGTCCAACTTa > 2:2024133/1‑93 (MQ=255)
gggCTGTTGCCTTACTTTTTAAATGTTCCATCGCGGCGATGCATACTGACTCATATTTAAACAGATCGTCAGCGAAAAAAATGTCCAACTTAt < 2:1059760/93‑1 (MQ=255)
gggCTGTTGCCTTACTTTTTAAATGTTCCATCGCGGCGATGCATACTGACGCATATTTAAACAGATCGTCAGCGAAAAAAATGTCCAACTTAt < 2:3565706/93‑1 (MQ=255)
gggCCGTTGCCTTACTTTTTAAATGTTCCATCGCGGCGATGCATACTGACTCATATTTAAACAGATCGTCAGCGAAAAAAATGTCCAACTTAt > 2:5747739/1‑93 (MQ=255)
ggCTGTTGCCTTACTTTTTAAATGTTCCATCGCGGCGATGCATACTGACTCATATTTAAACAGATCGTCAGCGAAAAAAATGTCCAACTTATc < 2:6041487/93‑1 (MQ=255)
ggCTGTTGCCTTACTTTTTAAATGTTCCATCGCGGCGATGCATACTGACTCATATTTAAACAGATCGTCAGCGAAAAAAATGTCCAACTTATc < 1:851786/93‑1 (MQ=255)
ggCCGTTGCCTTACTTTTTAAATGTTCCATCGCGGCGATGCATACTGACTCATATTTAAACAGATCGTCAGCGAAAAAAATGTCCAACTTATc < 1:5822997/93‑1 (MQ=255)
|
AAACCGATAAAGCCATTCTGGATAGCGAAGACGACGCCGAACTGGCACACCATTAATTCTTATGCTGGCAACGGTCCGTTTTGTATAGGGGCCGTTGCCTTACTTTTTAAATGTTCCATCGCGGCGATGCATACTGACTCATATTTAAACAGATCGTCAGCGAAAAAAATGTCCAACTTATC > NC_000913/1810294‑1810475
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
AAACCGATAAAGCCATTCTGGATAGCGAAGACGACGCCGAACTGGCACACCATTAATTCTTATGCTGGCAACGGTCCGTTTTGTATAGGGGCCGTTGCCTTACTTTTTAAATGTTCCATCGCGGCGATGCATACTGACTCATATTTAAACAGATCGTCAGCGAAAAAAATGTCCAACTTATCAAT > NC_000913/1810294‑1810478
|
AAACCGATAAAGCCATTCTGGATAGCGAAGACGACGCCGAACTGGCACACCATTAATTCTTATGCTGGCAACGGTCCGTTTTGTATAGGGGCCG > SRR4302547.1649088/1‑94 (MQ=60)
ACCGATAAAGCCATTCTGGATAGCGAAGACGACGCCGAACTGGCACACCATTAATTCTTATGCTGGCAACGGTCCGTTTTGTATAGGGGCTGTT < SRR4302547.338228/94‑1 (MQ=60)
CGATAAAGCCATTCTGGATAGCGAAGACGACGCCGAACTGGCACACCATTAATTCTTATGCTGGCAACGGTCCGTTTTGTATAGGGGCTGTTGC > SRR4302547.906903/1‑94 (MQ=60)
CGATAAAGCCATTCTGGATAGCGAAGACGACGCCGAACTGGCACACCATTAATTCTTATGCTGGCAACGGTCCGTTTTGTATAGGGGCTGTTGC > SRR4302547.4340282/1‑94 (MQ=60)
CGATAAAGCCATTCTGGATAGCGAAGACGACGCCGAACTGGCACACCATTAATTCTTATGCTGGCAACGGTCCGTTTTGTATAGGGGCTGTTGC > SRR4302547.5676276/1‑94 (MQ=60)
CGATAAAGCCATTCTGGATAGCGAAGACGACGCCGAACTGGCACACCATTAATTCTTATGCTGGCAACGGTCCGTTTTGTATAGAGGCTGTTGC > SRR4302547.6740087/1‑94 (MQ=60)
GATAAAGCCATTCTGGATAGCGAAGACGACGCCGAACTGGCACACCATTAATTCTTATGCTGGCAACGGTCCGTTTTGTATAGGGGCTGTTGCC > SRR4302547.800075/1‑94 (MQ=60)
ATAAAGCCATTCTGGATAGCGAAGACGACGCCGAACTGGCACACCATTAATTCTTATGCTGGCAACGGTCCGTTTTGTATAGGGGCCGTTGCCT > SRR4302547.4510652/1‑94 (MQ=60)
TAAAGCCATTCTGGATAGCGAAGACGACGCCGAACTGGCACACCATTAATTCTTATGCTGGCAACGGTCCGTTTTGTATAGGGGCTGTTGCCTT < SRR4302547.6286491/94‑1 (MQ=60)
TAAAGCCATTCTGGATAGCGAAGACGACGCCGAACTGGCACACCATTAATTCTTATGCTGGCAACGGTCCGTTTTGTATAGGGGCCGTTGCCTT > SRR4302547.2591591/1‑94 (MQ=60)
AAAGCCATTCTGGATAGCGAAGACGACGCCGAACTGGCACACCATTAATTCTTATGCTGGCAACGGTCCGTTTTGTATAGGGGCTGTTGCCTTA < SRR4302547.5850553/94‑1 (MQ=60)
AAAGCCATTCTGGATAGCGAAGACGACGCCGAACTGGCACACCATTAATTCTTATGCTGGCAACGGTCCGTTTTGTATAGGGGCCGTTGCCTTA > SRR4302547.1947958/1‑94 (MQ=60)
AAAGCCATTCTGGATAGCGAAGACGACGCCGAACTGGCACACCATTAATTCTTATGCTGGCAACGGTCCGTTTTGTATAGGGGCCGTTGCCTTA < SRR4302547.4724129/94‑1 (MQ=60)
AAGCCATTCTGGATAGCGAAGACGACGCCGAACTGGCACACCATTAATTCTTATGCTGGCAACGGTCCGTTTTGTATAGGGGCTGTTGCCTTAC > SRR4302547.3163159/1‑94 (MQ=60)
AAGCCATTCTGGATAGCGAAGACGACGCCGAACTGGCACACCATTAATTCTTATGCTGGCAACGGTCCGTTTTGTATAGGGGCTGTTGCCTTAC > SRR4302547.3755360/1‑94 (MQ=60)
AAGCCATTCTGGATAGCGAAGACGACGCCGAACTGGCACACCATTAATTCTTATGCTGGCAACGGTCCGTTTTGTATAGGGGCTGTTGCCTTAC < SRR4302547.5277973/94‑1 (MQ=60)
AGCCATTCTGGATAGCGAAGACGACGCCGAACTGGCACACCATTAATTCTTATGCTGGCAACGGTCCGTTTTGTATAGGGGCTGTTGCCTTACT > SRR4302547.2923910/1‑94 (MQ=60)
AGCCATTCTGGATAGCGAAGACGACGCCGAACTGGCACACCATTAATTCTTATGCTGGCAACGGTCCGTTTTGTATAGGGGCCGTTGCCTTACT < SRR4302547.3750006/94‑1 (MQ=60)
ATTCTGGATAGCGAAGACGACGCCGAACTGGCACACCATTAATTCTTATGCTGGCAACGGTCCGTTTTGTATAGGGGCTGTTGCCTTACTTTTT > SRR4302547.2946950/1‑94 (MQ=60)
TCTGGATAGCGAAGACGACGCCGAACTGGCACACCATTAATTCTTATGCTGGCAACGGTCCGTTTTGTATAGGGGCTGTTGCCTTACTTTTTAA < SRR4302547.4989242/94‑1 (MQ=60)
TGGATAGCGAAGACGACGCCGAACTGGCACACCATTAATTCTTATGCTGGCAACGGTCCGTTTTGTATAGGGGCTGTTGCCTTACTTTTTAAAT < SRR4302547.3624038/94‑1 (MQ=60)
GGATAGCGAAGACGACGCCGAACTGGCACACCATTAATTCTTATGCTGGCAACGGTCCGTTTTGTATAGGGGCTGTTGCCTTACTTTTTAAATG < SRR4302547.4649079/94‑1 (MQ=60)
GGATAGCGAAGACGACGCCGAACTGGCACACCATTAATTCTTATGCTGGCAACGGTCCGTTTTGTATAGGGGCTGTTGCCTTACTTTTTAAATG < SRR4302547.2569982/94‑1 (MQ=60)
GGATAGCGAAGACGACGCCGAACTGGCACACCATTAATTCTTATGCTGGCAACGGTCCGTTTTGTATAGGGGCTGTTGCCTTACTTTTTAAATG > SRR4302547.1355370/1‑94 (MQ=60)
GATAGCGAAGACGACGCCGAACTGGCACACCATTAATTCTTATGCTGGCAACGGTCCGTTTTGTATAGGGGCTGTTGCCTTACTTTTTAAATGT < SRR4302547.418099/94‑1 (MQ=60)
AGCGAAGACGACGCCGAACTGGCACACCATTAATTCTTATGCTGGCAACGGTCCGTTTTGTATAGGGGCTGTTGCCTTACTTTTTAAATGTTCC > SRR4302547.1471868/1‑94 (MQ=60)
AGCGAAGACGACGCCGAACTGGCACACCATTAATTCTTATGCTGGCAACGGTCCGTTTTGTATAGGGGCTGTTGCCTTACTTTTTAAATGTTCC > SRR4302547.3841300/1‑94 (MQ=60)
AGCGAAGACGACGCCGAACTGGCACACCATTAATTCTTATGCTGGCAACGGTCCGTTTTGTATAGGGGCTGTTGCCTTACTTTTTAAATGTTCC < SRR4302547.5660387/94‑1 (MQ=60)
CGAAGACGACGCCGAACTGGCACACCATTAATTCTTATGCTGGCAACGGTCCGTTTTGTATAGGGGCTGTTGCCTTACTTTTTAAATGTTCCAT > SRR4302547.1627744/1‑94 (MQ=60)
CGAAGACGACGCCGAACTGGCACACCATTAATTCTTATGCTGGCAACGGTCCGTTTTGTATAGGGGCTGTTGCCTTACTTTTTAAATGTTCCAT > SRR4302547.5625086/1‑94 (MQ=60)
CGAAGACGACGCCGAACTGGCACACCATTAATGCTTATGCTGGCAACGGTCCGTTTTGTATAGGGGCCGTTGCCTTACTTTTTAAATGTTCCAT < SRR4302547.2694270/94‑1 (MQ=60)
GAAGACGACGCCGAACTGGCACACCATTAATTCTTATGCTGGCAACGGTCCGTTTTGTATAGGGGCTGTTGCCTTACTTTTTAAATGTTCCATC > SRR4302547.690291/1‑94 (MQ=60)
GAAGACGACGCCGAACTGGCACACCATTAATTCTTATGCTGGCAACGGTCCGTTTTGTATAGGGGCTGTTGCCTTACTTTTTAAATGTTCCATC > SRR4302547.3103057/1‑94 (MQ=60)
AAGACGACGCCGAACTGGCACACCATTAATTCTTATGCTGGCAACGGTCCGTTTTGTATAGGGGCTGTTGCCTTACTTTTTAAATGTTCCATCG < SRR4302547.5664910/94‑1 (MQ=60)
AAGACGACGCCGAACTGGCACACCATTAATTCTTATGCTGGCAACGGTCCGTTTTGTATAGGGGCTGTTGCCTTACTTTTTAAATGTTCCATCG < SRR4302547.1405817/94‑1 (MQ=60)
AAGACGACGCCGAACTGGCACACCATTAATTCTTATGCTGGCAACGGTCCGTTTTGTATAGGGGCTGTTGCCTTACTTTTTAAATGTTCCATCG > SRR4302547.1781065/1‑94 (MQ=60)
GACGACGCCGAACTGGCACACCATTAATTCTTATGCTGGCAACGGTCCGTTTTGTATAGGGGCTGTTGCCTTACTTTTTAAATGTTCCATCGCG < SRR4302547.1923002/94‑1 (MQ=60)
ACGACGCCGAACTGGCACACCATTAATTCTTATGCTGGCAACGGTCCGTTTTGTATAGGGGCTGTTGCCTTACTTTTTAAATGTTCCATCGCGG > SRR4302547.873670/1‑94 (MQ=60)
CGACGCCGAACTGGCACACCATTAATTCTTATGCTGGCAACGGTCCGTTTTGTATAGGGGCTGTTGCCTTACTTTTTAAATGTTCCATCGCGGC < SRR4302547.4066063/94‑1 (MQ=60)
GACGCCGAACTGGCACACCATTAATTCTTATGCTGGCAACGGTCCGTTTTGTATAGGGGCTGTTGCCTTACTTTTTAAATGTTCCATCGCGGCG < SRR4302547.3827955/94‑1 (MQ=60)
GACGCCGAACTGGCACACCATTAATTCTTATGCTGGCAACGGTCCGTTTTGTATAGGGGCTGTTGCCTTACTTTTTAAATGTTCCATCGCGGCG > SRR4302547.3959832/1‑94 (MQ=60)
CGCCGAACTGGCACACCATTAATTCTTATGCTGGCAACGGTCCGTTTTGTATAGGGGCCGTTGCCTTACTTTTTAAATGTTCCATCGCGGCGAT < SRR4302547.6763444/94‑1 (MQ=60)
GCCGAACTGGCACACCATTAATTCTTATGCTGGCAACGGTCCGTTTTGTATAGGGGCTGTTGCCTTCCTTTTTAAATGTTCCATCGCGGCGATG > SRR4302547.369909/1‑94 (MQ=60)
GCCGAACTGGCACACCATTAATTCTTATGCTGGCAACGGTCCGTTTTGTATAGGGGCTGTTGCCTTACTTTTTAAATGTTCCATCGCGGCGATG > SRR4302547.6121293/1‑94 (MQ=60)
GCCGAACTGGCACACCATTAATTCTTATGCTGGCAACGGTCCGTTTTGTATAGGGGCTGTTGCCTTACTTTTTAAATGTTCCATCGCGGCGATG > SRR4302547.1746230/1‑94 (MQ=60)
GCCGAACTGGCACACCATTAATTCTTATGCTGGCAACGGTCCGTTTTGTATAGGGGCTGTTGCCTTACTTTTTAAATGTTCCATCGCGGCGATG > SRR4302547.3599699/1‑94 (MQ=60)
CGAACTGGCACACCATTAATTCTTATGCTGGCAACGGTCCGTTTTGTATAGGGGCTGTTGCCTTACTTTTTAAATGTTCCATCGCGGCGATGCA > SRR4302547.2668026/1‑94 (MQ=60)
GAACTGGCACACCATTAATTCTTATGCTGGCAACGGTCCGTTTTGTATAGGGGCTGTTGCCTTACTTTTTAAATGTTCCATCGCGGCGATGCAT < SRR4302547.198708/94‑1 (MQ=60)
ACTGGCACACCATTAATTCTTATGCTGGCAACGGTCCGTTTTGTATAGGGGCTGTTGCCTTACTTTTTAAATGTTCCATCGCGGCGATGCATAC > SRR4302547.2326254/1‑94 (MQ=60)
CTGGCACACCATTAATTCTTATGCTGGCAACGGTCCGTTTTGTATAGGGGCTGTTGCCTTACTTTTTAAATGTTCCATCGCGGCGATGCATACT < SRR4302547.4280773/94‑1 (MQ=60)
TGGCACACCATTAATTCTTATGCTGGCAACGGTCCGTTTTGTATAGGGGCTGTTGCCTTACTTTTTAAATGTTCCATCGCGGCGATGCATACTG > SRR4302547.3306897/1‑94 (MQ=60)
TGGCACACCATTAATTCTTATGCTGGCAACGGTCCGTTTTGTATAGGGGCTGCTGCCTTACTTTTTAAATGTTCCATCGCGGCGATGCATACTG < SRR4302547.5518900/94‑1 (MQ=60)
CACACCATTAATTCTTATGCTGGCAACGGTCCGTTTTGTATAGGGGCTGTTGCCTTACTTTTTAAATGTTCCATCGCGGCGATGCATACTGACT > SRR4302547.266121/1‑94 (MQ=60)
CACACCATTAATTCTTATGCTGGCAACGGTCCGTTTTGTATAGGGGCTGTTGCCTTACTTTTTAAATGTTCCATCGCGGCGATGCATACTGACT < SRR4302547.4445007/94‑1 (MQ=60)
CACACCATTAATTCTTATGCTGGCAACGGTCCGTTTTGTATAGGGGCTGTTGCCTTACTTTTTAAATGTTCCATCGCGGCGATGCATACTGACT > SRR4302547.4193050/1‑94 (MQ=60)
CACACCATTAATTCTTATGCTGGCAACGGTCCGTTTTGTATAGGGGCTGTTGCCTTACTTTTTAAATGTTCCATCGCGGCGATGCATACTGACT > SRR4302547.3093743/1‑94 (MQ=60)
ACACCATTAATTCTTATGCTGGCAACGGTCCGTTTTGTATAGGGGCTGTTGCCTTACTTTTTAAATGTTCCATCGCGGCGATGCATACTGACTC > SRR4302547.6201658/1‑94 (MQ=60)
ACACCATTAATTCTTATGCTGGCAACGGTCCGTTTTGTATAGGGGCTGTTGCCTTACTTTTTAAATGTTCCATCGCGGCGATGCATACTGACTC > SRR4302547.4618232/1‑94 (MQ=60)
CACCATTAATTCTTATGCTGGCAACGGTCCGTTTTGTATAGGGGCTGTTGCCTTACTTTTTAAATGTTCCATCGCGGCGATGCATACTGACTCA > SRR4302547.2359704/1‑94 (MQ=60)
CCATTAATTCTTATGCTGGCAACGGTCCGTTTTGTATAGGGGCTGTTGCCTTACTTTTTAAATGTTCCATCGCGGCGATGCATACTGACTCATA > SRR4302547.2054792/1‑94 (MQ=60)
CATTAATTCTTATGCTGGCAACGGTCCGTTTTGTATAGGGGCTGTTGCCTTACTTTTTAAATGTTCCATCGCGGCGATGCATACTGACTCATAT < SRR4302547.2788630/94‑1 (MQ=60)
ATTAATTCTTATGCTGGCAACGGTCCGTTTTGTATAGGGGCTGTTGCCTTACTTTTTAAATGTTCCATCGCGGCGATGCATACTGACTCATATT > SRR4302547.5642234/1‑94 (MQ=60)
TTAATTCTTATGCTGGCAACGGTCCGTTTTGTATAGGGGCTGTTGCCTTACTTTTTAAATGTTCCATCGCGGCGATGCATACTGACTCATATTT < SRR4302547.6500611/94‑1 (MQ=60)
AATTCTTATGCTGGCAACGGTCCGTTTTGTATAGGGGCCGTTGCCTTACTTTTTAAATGTTCCATCGCGGCGATGCATACTGACTCATATTTAA > SRR4302547.4311485/1‑94 (MQ=60)
ATTCTTATGCTGGCAACGGTCCGTTTTGTATAGGGGCTGTTGCCTTACTTTTTAAATGTTCCATCGCGGCGATGCATACTGACTCATATTTAAA > SRR4302547.2636198/1‑94 (MQ=60)
ATTCTTATGCTGGCAACGGTCCGTTTTGTATAGGGGCTGTTGCCTTACTTTTTAAATGTTCCATCGCGGCGATGCATACTGACTCATATTTAAA > SRR4302547.5382722/1‑94 (MQ=60)
CTTATGCTGGCAACGGTCCGTTTTGTATAGGGGCTGTTGCCTTACTTTTTAAATGTTCCATCGCGGCGATGCATACTGACTCATATTTAAACAG > SRR4302547.3039024/1‑94 (MQ=60)
TATGCTGGCAACGGTCCGTTTTGTATAGGGGCCGTTGCCTTACTTTTTAAATGTTCCATCGCGGCGATGCATACTGACTCATATTTAAACAGAT < SRR4302547.1062136/94‑1 (MQ=60)
ATGCTGGCAACGGTCCGTTTTGTATAGGGGCTGTTGCCTTACTTTTTAAATGTTCCATCGCGGCGATGCATACTGACTCATATTTAAACAGATC > SRR4302547.2026603/1‑94 (MQ=60)
ATGCTGGCAACGGTCCGTTTTGTATAGGGGCTGTTGCCTTACTTTTTAAATGTTCCATCGCGGCGATGCATACTGACTCATATTTAAACAGATC < SRR4302547.2629687/94‑1 (MQ=60)
ATGCTGGCAACGGTCCGTTTTGTATAGGGGCTGTTGCCTTACTTTTTAAATGTTCCATCGCGGCGATGCATACTGACTCATATTTAAACAGATC < SRR4302547.2563816/94‑1 (MQ=60)
CTGGCAACGGTCCGTTTTGTATAGGGGCTGTTGCCTTACTTTTTAAATGTTCCATCGCGGCGATGCATACTGACTCATATTTAAACAGATCGTC > SRR4302547.2960350/1‑94 (MQ=60)
CTGGCAACGGTCCGTTTTGTATAGGGGCTGTTGCCTTACTTTTTAAATGTTCCATCGCGGCGATGCATACTGACTCATATTTAAACAGATCGTC < SRR4302547.3762197/94‑1 (MQ=60)
TGGCAACGGTCCGTTTTGTATAGGGGCTGTTGCCTTACTTTTTAAATGTTCCATCGCGGCGATGCATACTGACTCATATTTAAACAGATCGTCA > SRR4302547.6427837/1‑94 (MQ=60)
TGGCAACGGTCCGTTTTGTATAGGGGCTGTTGCCTTACTTTTTAAATGTTCCATCGCGGCGATGCATACTGACTCATATTTAAACAGATCGTCA < SRR4302547.2544017/94‑1 (MQ=60)
GCAACGGTGCGTTTTGTATAGGGGCTGTTGCCTTACTTTTTAAATGTTCCATCGCGGCGATGCATACTGACTCATATTTAAACAGATCGTCAGC < SRR4302547.1913007/94‑1 (MQ=60)
GCAACGGTCCGTTTTGTATAGGGGCTGTTGCCTTACTTTTTAAATGTTCCATCGCGGCGATGCATACTGACTCATATTTAAACAGATCGTCAGC < SRR4302547.2441223/94‑1 (MQ=60)
GCAACGGTCCGTTTTGTATAGGGGCTGTTGCCTTACTTTTTAAATGTTCCATCGCGGCGATGCATACTGACTCATATTTAAACAGATCGTCAGC < SRR4302547.2174894/94‑1 (MQ=60)
ACGGTCCGTTTTGTATAGGGGCTGTTGCCTTACTTTTTAAATGTTCCATCGCGGCGATGCATACTGACTCATATTTAAACAGATCGTCAGCGAA < SRR4302547.1048660/94‑1 (MQ=60)
GGTCCGTTTTGTATAGGGGCTGTTGCCTTACTTTTTAAATGTTCCATCGCGGCGATGCATACTGACTCATATTTAAACAGATCGTCAGCGAAAA < SRR4302547.888268/94‑1 (MQ=60)
GTCCGTTTTGTATAGGGGCTGTTGCCTTACTTTTTAAATGTTCCATCGCGGCGATGCATACTGACTCATATTTAAACAGATCGTCAGCGAAAAA > SRR4302547.4751388/1‑94 (MQ=60)
TCCGTTTTGTATAGGGGCTGTTGCCTTACTTTTTAAATGTTCCATCGCGGCGATGCATACTGACTCATATTTAAACAGATCGTCAGCGAAAAAA > SRR4302547.2041020/1‑94 (MQ=60)
TCCGTTTTGTATAGGGGCTGTTGCCTTACTTTTTAAATGTTCCATCGCGGCGATGCATACTGACTCATATTTAAACAGATCGTCAGCGAAAAAA > SRR4302547.2589487/1‑94 (MQ=60)
TTTTGTATAGGGGCTGTTGCCTTACTTTTTAAATGTTCCATCGCGGCGATGCATACTGACTCATATTTAAACAGATCGTCAGCGAAAAAAATGT < SRR4302547.2817757/94‑1 (MQ=60)
TTTGTATAGGGGCTGTTGCCTTACTTTTTAAATGTTCCATCGCGGCGATGCATACTGACTCATATTTAAACAGATCGTCAGCGAAAAAAATGTC > SRR4302547.2170704/1‑94 (MQ=60)
TTGTATAGGGGCTGTTGCCTTACTTTTTAAATGTTCCATCGCGGCGATGCATACTGACTCATATTTAAACAGATCGTCAGCGAAAAAAATGTCC > SRR4302547.3913719/1‑94 (MQ=60)
TGTATAGGGGCTGTTGCCTTACTTTTTAAATGTTCCATCGCGGCGATGCATACTGACTCATATTTAAACAGATCGTCAGCGAAAAAAATGTCCA < SRR4302547.6268189/94‑1 (MQ=60)
GTATAGGGGCTGTTGCCTTACTTTTTAAATGTTCCATCGCGGCGATGCATACTGACTCATATTTAAACAGATCGTCAGCGAAAAAAATGTCCAA < SRR4302547.1038922/94‑1 (MQ=60)
ATAGGGGCTGTTGCCTTACTTTTTAAATGTTCCATCGCGGCGATGCATACTGACTCATATTTAAACAGATCGTCAGCGAAAAAAATGTCCAACT < SRR4302547.1009329/94‑1 (MQ=60)
AGGGGCTGTTGCCTTACTTTTTAAATGTTCCATCGCGGCGATGCATACTGACTCATATTTAAACAGTTCGTCAGCGAAAAAAATGTCCAACTTA < SRR4302547.1006451/94‑1 (MQ=60)
GGGGCTGTTGCCTTACTTTTTAAATGTTCCATCGCGGCGATGCATACTGACTCATATTTAAACAGATCGTCAGCGAAAAAAATGTCCAACTTAT < SRR4302547.3319855/94‑1 (MQ=60)
GGCTGTTGCCTTACTTTTTAAATGTTCCATCGCGGCGATGCATACTGACTCATATTTAAACAGATCGTCAGCGAAAAAAATGTCCAACTTATCA > SRR4302547.5652907/1‑94 (MQ=60)
GGCTGTTGCCTTACTTTTTAAATGTTCCATCGCGGCGATGCATACTGACTCATATTTAAACAGATCGTCAGCGAAAAAAATGTCCAACTTATCA < SRR4302547.868052/94‑1 (MQ=60)
GGCTGTTGCCTTACTTTTTAAATGTTCCATCGCGGCGATGCATACTGACTCATATTTAAACAGATCGTCAGCGAAAAAAATGTCCAACTTATCA > SRR4302547.1503864/1‑94 (MQ=60)
GGCCGTTGCCTTACTTTTTAAATGTTCCATCGCGGCGATGCATACTGACTCATATTTAAACAGATCGTCAGCGAAAAAAATGTCCAACTTATCA < SRR4302547.5943481/94‑1 (MQ=60)
GCTGTTGCCTTACTTTTTAAATGTTCCATCGCGGCGATGCATACTGACTCATATTTAAACAGATCGTCAGCGAAAAAAATGTCCAACTTATCAA < SRR4302547.2669992/94‑1 (MQ=60)
CTGTTGCCTTACTTTTTAAATGTTCCATCGCGGCGATGCATACTGACTCATATTTAAACAGATCGTCAGCGAAAAAAATGTCCAACTTATCAAT > SRR4302547.5135197/1‑94 (MQ=60)
CTGTTGCCTTACTTTTTAAATGTTCCATCGCGGCGATGCATACTGACTCATATTTAAACAGATCGTCAGCGAAAAAAATGTCCAACTTATCAAT < SRR4302547.1258793/94‑1 (MQ=60)
CTGTTGCCTTACTTTTTAAATGTTCCATCGCGGCGATGCATACTGACTCATATTTAAACAGATCGTCAGCGAAAAAAATGTCCAACTTATCAAT < SRR4302547.909913/94‑1 (MQ=60)
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AAACCGATAAAGCCATTCTGGATAGCGAAGACGACGCCGAACTGGCACACCATTAATTCTTATGCTGGCAACGGTCCGTTTTGTATAGGGGCCGTTGCCTTACTTTTTAAATGTTCCATCGCGGCGATGCATACTGACTCATATTTAAACAGATCGTCAGCGAAAAAAATGTCCAACTTATCAAT > NC_000913/1810294‑1810478
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
