Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
593 |
264.2 |
13311096 |
97.8% |
13018251 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
2,213,926 |
T→C |
T191A (ACG→GCG) |
yehW ← |
putative transport system permease protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 2,213,926 | 0 | T | C | 89.1%
| 661.1
/ 58.6
| 230 | T191A (ACG→GCG) | yehW | putative transport system permease protein |
| Reads supporting (aligned to +/- strand): ref base T (11/14); new base C (99/106); total (110/120) |
| Fisher's exact test for biased strand distribution p-value = 8.33e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.21e-01 |
Only 100 of 238 total aligned reads displayed.
CCACCAGTAACGCCCCCTGGATCACATACGCGGTATTAAATCCGCTAAGCCCGATGATGATGGGCGTACCCAGCGTGCTGGCCCCTACCGTTGAGGCGATCGTCGCCGTACCAATGTTGATAATCACCGAAGTTCGCACGCCCGCCAGAATCACCGGAGCCGCCAGCGGTAGCTCGACCTT > NC_000913/2213836‑2214016
|
ccaccaGTAACGCCCCCTGGATCACATACGCGGTATTAAATCCGCTAAGCCCGATGATGATGGGCGTACCCAGCGTGCTGGCCCCTACCGCTg > 1:2790461/1‑93 (MQ=255)
caccaGTAACGCCCCCTGGATCACATACGCGGTATTAAATCCGCTAAGCCCGATGATGATGGGCGTACCCAGCGTGCTGGCCCCTACCGCTGa < 1:4281873/93‑1 (MQ=255)
cccaGTAACGCCCCCTGGATCACATACGCGGTATTAAATCCGCTAAGCCCGATGATGATGGGCGTACCCAGCGTGCTGGCCCCTACCGCTGAg < 2:5397220/92‑1 (MQ=255)
caGTAACGCCCCCTGGATCACATACGCGGTATTAAATCCGCTAAGCCCGATGATGATGGGCGTACCCAGCGTGCTGGCCCCTACCGCTGAGGc > 2:6000545/1‑93 (MQ=255)
caGTAACGCCCCCTGGATCACATACGCGGTATTAAATCCGCTAAGCCCGATGATGATGGGCGTACCCAGCGTGCTGGCCCCTACCGCTGAGGc < 2:1016905/93‑1 (MQ=255)
gTAACGCCCCCTGGATCACATACGCGGTATTAAATCCGCTAAGCCCGATGATGATGGGCGTACCCAGCGTGCTGGCCCCTACCGTTGAGGCGa > 2:6639874/1‑93 (MQ=255)
gTAACGCCCCCTGGATCACATACGCGGTATTAAATCCGCTAAGCCCGATGATGATGGGCGTACCCAGCGTGCTGGCCCCTACCGCTGAGGCGa > 2:3385341/1‑93 (MQ=255)
gTAACGCCCCCTGGATCACATACGCGGTATTAAATCCGCTAAGCCCGATGATGATGGGCGTACCCAGCGTGCTGGCCCCTACCGCTGAGGCGa > 2:4126347/1‑93 (MQ=255)
gTAACGCCCCCTGGATCACATACGCGGTATTAAATCCGCTAAGCCCGATGATGATGGGCGTACCCAGCGTGCTGGCCCCTACCGCTGAGGCGa > 1:481055/1‑93 (MQ=255)
tAACGCCCCCTGGATCACATACGCGGTATTAAATCCGCTAAGCCCGATGATGATGGGCGTACCCAGCGTGCTGGCCCCTACCGCTGAGGCGAt < 2:4545238/93‑1 (MQ=255)
tAACGCCCCCTGGATCACATACGCGGTATTAAATCCGCTAAGCCCGATGATGATGGGCGTACCCAGCGTGCTGGCCCCTACCGCTGAGGCGAt < 2:3264942/93‑1 (MQ=255)
tAACGCCCCCTGGATCACATACGCGGTATTAAATCCGCTAAGCCCGATGATGATGGGCGTACCCAGCGTGCTGGCCCCTACCGCTGAGGCGAt < 1:4727163/93‑1 (MQ=255)
tAACGCCCCCTGGATCACATACGCGGTATTAAATCCGCTAAGCCCGATGATGATGGGCGTACCCAGCGTGCTGGCCCCTACCGCTGAGGCGAt < 2:1534212/93‑1 (MQ=255)
tAACGCCCCCTGGATCACATACGCGGTATTAAATCCGCTAAGCCCGATGATGATGGGCGTACCCAGCGTGCTGGCCCCTACCGCTGAGGCGAt < 2:2161362/93‑1 (MQ=255)
aaCGCCCCCTGGATCACATACGCGGTATTAAATCCGCTAAGCCCGATGATGATGGGCGTACCCAGCGTGCTGGCCCCTACCGCTGAGGCGAtc < 1:2432954/93‑1 (MQ=255)
aCGCCCCCTGGATCACATACGCGGTATTAAATCCGCTAAGCCCGATGATGATGGGCGTACCCAGCGTGCTGGCCCCTACCGCTGAGGCGAtcg < 2:4800956/93‑1 (MQ=255)
aCGCCCCCTGGATCACATACGCGGTATTAAATCCGCTAAGCCCGATGATGATGGGCGTACCCAGCGTGCTGGCCCCTACCGCTGAGGCGAtcg < 2:2959675/93‑1 (MQ=255)
cGCCCCCTGGATCACATACGCGGTATTAAATCCGCTAAGCCCGATGATGATGGGCGTACCCAGCGTGCTGGCCCCTACCGCTGAGGCGAtcgt < 2:4275917/93‑1 (MQ=255)
cGCCCCCTGGATCACATACGCGGTATTAAATCCGCTAAGCCCGATGATGATGGGCGTACCCAGCGTGCTGGCCCCTACCGCTGAGGCGAtcgt < 2:806410/93‑1 (MQ=255)
cccccTGGATCACATACGCGGTATTAAATCCGCTAAGCCCGATGATGATGGGCGTACCCAGCGTGCTGGCCCCTACCGTTGAGGCGAtcgtcg > 2:1720176/1‑93 (MQ=255)
ccccTGGATCACATACGCGGTATTAAATCCGCTAAGCCCGATGCTGATGGGCGTACCCAGCGTGCTGGCCCCTCCCGCTGAGGCGATCGTCGc < 2:4011335/93‑1 (MQ=255)
cccTGGATCACATACGCGGTATTAAATCCGCTAAGCCCGATGATGATGGGCGTACCCAGCGTGCTGGCCCCTACCGCTGAGGCGATCGTCGcc > 2:3760338/1‑93 (MQ=255)
cccTGGATCACATACGCGGTATTAAATCCGCTAAGCCCGATGATGATGGGCGTACCCAGCGTGCTGGCCCCTACCGCTGAGGCGATCGTCGcc < 2:474718/93‑1 (MQ=255)
cTGGATCACATACGCGGTATTAAATCCGCTAAGCCCGATGATGATGGGCGTACCCAGCGTGCTGGCCCCTACCGCTGAGGCGATCGTCGCCGt > 2:513383/1‑93 (MQ=255)
aTCACATACGCGGTATTAAATCCGCTAAGCCCGATGATGATGGGCGTACCCAGCGTGCTGGCCCCTACCGCTGAGGCGATCGTCGCCGTACCa > 1:3086775/1‑93 (MQ=255)
aTCACATACGCGGTATTAAATCCGCTAAGCCCGATGATGATGGGCGTACCCAGCGTGCTGGCCCCTACCGCTGAGGCGATCGTCGCCGTACCa > 1:2510646/1‑93 (MQ=255)
caTACGCGGTATTAAATCCGCTAAGCCCGATGATGATGGGCGTACCCAGCGTGCTGGCCCCTACCGTTGAGGCGATCGTCGCCGTACCAATGt < 2:2486855/93‑1 (MQ=255)
caTACGCGGTATTAAATCCGCTAAGCCCGATGATGATGGGCGTACCCAGCGTGCTGGCCCCTACCGCTGAGGCGATCGTCGCCGTACCAATGt > 1:1872750/1‑93 (MQ=255)
aTACGCGGTATTAAATCCGCTAAGCCCGATGATGATGGGCGTACCCAGCGTGCTGGCCCCTACCGCTGAGGCGATCGTCGCCGTACCAATGtt < 2:2675971/93‑1 (MQ=255)
aCGCGGTATTAAATCCGCTAAGCCCGATGATGATGGGCGTACCCAGCGTGCTGGCCCCTACCGCTGAGGCGATCGTCGCCGTACCAATGTTGa < 1:6578806/93‑1 (MQ=255)
gcgGTATTAAATCCGCTAAGCCCGATGATGATGGGCGTACCCAGCGTGCTGGCCCCTACCGCTGAGGCGATCGTCGCCGTACCAATGTTGATa < 1:4986115/93‑1 (MQ=255)
gcgGTATTAAATCCGCTAAGCCCGATGATGATGGGCGTACCCAGCGTGCTGGCCCCTACCGCTGAGGCGATCGTCGCCGTACCAATGTTGATa < 2:3150144/93‑1 (MQ=255)
cgGTATTAAATCCGCTAAGCCCGATGATGATGGGCGTACCCAGCGTGCTGGCCCCTACCGCTGAGGCGATCGTCGCCGTACCAATGTTGATaa > 1:6585773/1‑93 (MQ=255)
aTTAAATCCGCTAAGCCCGATGATGATGGGCGTACCCAGCGTGCTGGCCCCTACCGTTGAGGCGATCGTCGCCGTACCAATGTTGATAATCAc > 2:2857163/1‑93 (MQ=255)
ttAAATCCGCTAAGCCCGATGATGATGGGCGTACCCAGCGTGCTGGCCCCTACCGCTGAGGCGATCGTCGCCGTACCAATGTTGATAATCAcc > 1:3802650/1‑93 (MQ=255)
ttAAATCCGCTAAGCCCGATGATGATGGGCGTACCCAGCGTGCTGGCCCCTACCGCTGAGGCGATCGTCGCCGTACCAATGTTGATAATCAcc > 1:6266727/1‑93 (MQ=255)
ttAAATCCGCTAAGCCCGATGATGATGGGCGTACCCAGCGTGCTGGCCCCTACCGCTGAGGCGATCGTCGCCGTACCAATGTTGATAATCAcc > 2:574154/1‑93 (MQ=255)
tAAATCCGCTAAGCCCGATGATGATGGGCGTACCCAGCGTGCTGGCCCCTACCGCTGAGGCGACCGTCGCCGTACCAATGTTGATAATCACCg > 1:6528993/1‑93 (MQ=255)
aaaTCCGCTAAGCCCGATGATGATGGGCGTACCCAGCGTGCTGGCCCCTACCGCTGAGGCGATCGTCGCCGTACCAATGTTGATAATCACCGa < 1:5033939/93‑1 (MQ=255)
aaaTCCGCTAAGCCCGATGATGATGGGCGTACCCAGCGTGCTGGCCCCTACCGCTGAGGCGATCGTCGCCGTACCAATGTTGATAATCACCGa > 2:1913286/1‑93 (MQ=255)
aaTCCGCTAAGCCCGATGATGATGGGCGTACCCAGCGTGCTGGCCCCTACCGCTGAGGCGATCGTCGCCGTACCAATGTTGATAATCACCGaa < 1:2651813/93‑1 (MQ=255)
aaTCCGCTAAGCCCGATGATGATGGGCGTACCCAGCGTGCTGGCCCCTACCGCTGAGGCGATCGTCGCCGTACCAATGTTGATAATCACCGaa < 2:6055047/93‑1 (MQ=255)
aTCCGCTAAGCCCGATGATGATGGGCGTACCCAGCGTGCTGGCCCCTACCGCTGAGGCGATCGTCGCCGTACCAATGTTGATAATCACCGAAg > 2:4408689/1‑93 (MQ=255)
tCCGCTAAGCCCGATGATGATGGGCGTACCCAGCGTGCTGGCCCCTACCGCTGAGGCGATCGTCGCCGTACCAATGTTGATAATCACCGAAGt > 1:4846870/1‑93 (MQ=255)
tCCGCTAAGCCCGATGATGATGGGCGTACCCAGCGTGCTGGCCCCTACCGCTGAGGCGATCGTCGCCGTACCAATGTTGATAATCACCGAAGt < 2:5692186/93‑1 (MQ=255)
tCCGCTAAGCCCGATGATGATGGGCGTACCCAGCGTGCTGGCCCCTACCGCTGAGGCGATCGTCGCCGTACCAATGTTGATAATCACCGAAGt > 1:1284781/1‑93 (MQ=255)
tCCGCTAAGCCCGATGATGATGGGCGTACCCAGCGTGCTGGCCCCTACCGCTGAGGCGATCGTCGCCGTACCAATGTTGATAATCACCGAAGt > 1:1139942/1‑93 (MQ=255)
tCCGCTAAGCCCGATGATGATGGGCGTACCCAGCGTGCTGGCCCCTACCGCTGAGGCGATCGTCGCCGTACCAATGTTGATAATCACCGAAGt < 1:1941131/93‑1 (MQ=255)
tCCGCTAAGCCCGATGATGATGGGCGTACCCAGCGTGCTGGCCCCTACCGCTGAGGCGATCGTCGCCGTACCAATGTTGATAATCACCGAAGt > 1:3877714/1‑93 (MQ=255)
ccGCTAAGCCCGATGATGATGGGCGTACCCAGCGTGCTGGCCCCTACCGCTGAGGCGATCGTCGCCGTACCAATGTTGATAATCACCGAAGtt > 2:6181129/1‑93 (MQ=255)
ccGCTAAGCCCGATGATGATGGGCGTACCCAGCGTGCTGGCCCCTACCGCTGAGGCGATCGTCGCCGTACCAATGTTGATAATCACCGAAGtt < 1:2210695/93‑1 (MQ=255)
cGCTAAGCCCGATGATGATGGGCGTACCCAGCGTGCTGGCCCCTACCGCTGAGGCGATCGTCGCCGTACCAATGTTGATAATCACCGAAGTTc < 1:537808/93‑1 (MQ=255)
gCTAAGCCCGATGATGATGGGCGTACCCAGCGTGCTGGCCCCTACCGCTGAGGCGATCGTCGCCGTACCAATGTTGATAATCACCGAAGTTCg < 2:2895869/93‑1 (MQ=255)
cTAAGCCCGATGATGATGGGCGTACCCAGCGTGCTGGCCCCTACCGTTGAGGCGATCGTCGCCGTACCAATGTTGATAATCACCGAAGTTCGc < 2:3571405/93‑1 (MQ=255)
tAAGCCCGATGATGATGGGCGTACCCAGCGTGCTGGCCCCTACCGTTGAGGCGATCGTCGCCGTACCAATGTTGATAATCACCGAAGTTCGCa > 1:3488593/1‑93 (MQ=255)
aaGCCCGATGATGATGGGCGTACCCAGCGTGCTGGCCCCTACCGCTGAGGCGATCGTCGCCGTACCAATGTTGATAATCACCGAAGTTCGCAc > 1:3256656/1‑93 (MQ=255)
cccGATGATGATGGGCGTACCCAGCGTGCTGGCCCCTACCGCTGAGGCGATCGTCGCCGTACCAATGTTGATAATCACCGAAGTTCGCAcgcc < 1:5888994/93‑1 (MQ=255)
cccGATGATGATGGGCGTACCCAGCGTGCTGGCCCCTACCGCTGAGGCGATCGTCGCCGTACCAATGTTGATAATCACCGAAGTTCGCAcgcc < 2:1379757/93‑1 (MQ=255)
ccGATGATGATGGGCGTACCCAGCGTGCTGGCCCCTACCGCTGAGGCGATCGTCGCCGTACCAATGTTGATAATCACCGAAGTTCGCAcgccc < 2:6533164/93‑1 (MQ=255)
ccGATGATGATGGGCGTACCCAGCGTGCTGGCCCCTACCGCTGAGGCGATCGTCGCCGTACCAATGTTGATAATCACCGAAGTTCGCAcgccc > 2:2811950/1‑93 (MQ=255)
gatgatgatGGGCGTACCCAGCGTGCTGGCCCCTACCGTTGAGGCGATCGTCGCCGTACCAATGTTGATAATCACCGAAGTTCGCAcgcccgc > 2:3515032/1‑93 (MQ=255)
atgatgatgGGCGTACCCAGCGTGCTAGCCCCTACCGCTGAGGCGATCGGCGCCGTACCAATGTTGATAATCACCGAAGTTCGCAcgcccgcc > 1:6029287/1‑93 (MQ=255)
gtgatgCGCGTACCCAGCGTGCTGGCCCCTACCGCTGAGGCGATCGTCGCCGTACCAATGTTGATAATCACCGAAGTTCGCACGCCCGCCAGa < 1:3157710/92‑1 (MQ=255)
atgatgGGCGTACCCAGCGTGCTGGCCCCTACCGCTGAGGCGATCGTCGCCGTACCAATGTTGATAATCACCGAAGTTCGCACGCCCGCCAGa < 2:4874696/93‑1 (MQ=255)
atgatgGGCGTACCCAGCGTGCTGGCCCCTACCGCTGAGGCGATCGTCGCCGTACCAATGTTGATAATCACCGAAGTTCGCACGCCCGCCAGa > 2:3334471/1‑93 (MQ=255)
atgatgGGCGTACCCAGCGTGCTGGCCCCTACCGCTGAGGCGATCGTCGCCGTACCAATGTTGATAATCACCGAAGTTCGCACGCCCGCCAGa < 1:3260061/93‑1 (MQ=255)
gatgGGCGTACCCAGCGTGCTGGCCCCTACCGCTGAGGCGATCGTCGCCGTACCAATGTTGATAATCACCGAAGTTCGCACGCCCGCCAGAAt < 1:4824731/93‑1 (MQ=255)
gatgGGCGTACCCAGCGTGCTGGCCCCTACCGCTGAGGCGATCGTCGCCGTACCAATGTTGATAATCACCGAAGTTCGCACGCCCGCCAGAAt > 1:3169707/1‑93 (MQ=255)
atgGGCGTACCCAGCGTGCTGGCCCCTACCGCTGAGGCGATCGTCGCCGTACCAATGTTGATAATCACCGAAGTTCGCACGCCCGCCAGAATc < 1:608532/93‑1 (MQ=255)
tgGGCGTACCCAGCGTGCTGGCCCCTACCGCTGAGGCGATCGTCGCCGTACCAATGTTGATAATCACCGAAGTTCGCACGCCCGCCAGAATCa > 1:1519214/1‑93 (MQ=255)
gggCGTACCCAGCGTGCTGGCCCCTACCGTTGAGGCGATCGTCGCCGTACCAATGTTGATAATCACCGAAGTTCGCACGCCCGCCAGAATCAc < 1:1429196/93‑1 (MQ=255)
gggCGTACCCAGCGTGCTGGCCCCTACCGCTGAGGCGATCGTCGCCGTACCAATGTTGATAATCACCGAAGTTCGCACGCCCGCCAGAATCAc > 2:3441731/1‑93 (MQ=255)
ggCGTACCCGGCGTGCTGGCCCCTACCGCTGAGGCGATCGTCGCCGTACCAATGTTGATAATCACCGAAGTTCGCACGCCCGCCAGAATCAcc < 1:157967/93‑1 (MQ=255)
ggCGTACCCAGCGTGCTGGCCCCTACCGCTGAGGCGATCGTCGCCGTACCAATGTTGATAATCACCGAAGTTCGCACGCCCGCCAGAATCAcc < 1:892898/93‑1 (MQ=255)
cGTACCCAGCGTGCTGGCCCCTACCGCTGAGGCGATCGTCGCCGTACCAATGTTGATAATCACCGAAGTTCGCACGCCCGCCAGAATCACCgg > 1:1185591/1‑93 (MQ=255)
cGTACCCAGCGTGCTGGCCCCTACCGCTGAGGCGATCGTCGCCGTACCAATGTTGATAATCACCGAAGTTCGCACGCCCGCCAGAATCACCgg < 1:2883042/93‑1 (MQ=255)
ctACCCAGCGTGCTGCCCCCTACCGCTGAGGCGATCGTCGCCGTACCAATGTTGATAATCACCGAAGTTCGCACGCCCGCCAGAATCACCGGa < 1:5068630/92‑1 (MQ=255)
tACCCAGCGTGCTGGCCCCTACCGCTGAGGCGATCGTCGCCGTACCAATGTTGATAATCACCGAAGTTCGCACGCCCGCCAGAATCACCGGAg > 2:836402/1‑93 (MQ=255)
tACCCAGCGTGCTGGCCCCTACCGCTGAGGCGATCGTCGCCGTACCAATGTTGATAATCACCGAAGTTCGCACGCCCGCCAGAATCACCGGAg > 2:508775/1‑93 (MQ=255)
tACCCAGCGTGCTGGCCCCTACCGCTGAGGCGATCGTCGCCGTACCAATGTTGATAATCACCGAAGTTCGCACGCCCGCCAGAATCACCGGAg < 1:6394338/93‑1 (MQ=255)
cccAGCGTGCGGGCCCCTACCGCTGAGGCGATCGTCGCCGTACCAATGTTGATAATCACCGAAGTTCGCACGCCCGCCAGAATCACCGGAgcc < 2:2365582/93‑1 (MQ=255)
ccAGCGTGCTGGCCCCTACCGCTGAGGCGATCGTCGCCGTACCAATGTTGATAATCACCGAAGTTCGCACGCCCGCCAGAATCACCGGAgccg > 2:5352199/1‑93 (MQ=255)
cAGCGTGCTGGCCCCTACCGCTGAGGCGATCGTCGCCGTGCCAATGTTGATAATCACCGAAGTTCGCACGCCCGCCAGAATCACCGGAgccgc < 1:6348392/93‑1 (MQ=255)
aGCGTGCTGGCCCCTACCGCTGAGGCGATCGTCGCCGTACCAATGTTGATAATCACCGAAGTTCGCACGCCCGCCAGAATCACCGGAgccgcc < 2:5226798/93‑1 (MQ=255)
gTGCTGGCCCCTACCGTTGAGGCGATCGTCGCCGTACCAATGTTGATAATCACCGAAGTTCGCACGCCCGCCAGAATCACCGGAGCCGCCAGc < 1:4116381/93‑1 (MQ=255)
tGCTGGCCCCTACCGCTGAGGCGATCGTCGCCGTACCAATGTTGATAATCACCGAAGTTCGCACGCCCGCCAGAATCACCGGAGCCGCCAGCg < 1:425584/93‑1 (MQ=255)
gCTGGCCCCTACCGCTGAGGCGATCGTCGCCGTACCAATGTTGATAATCACCGAAGTTCGCACGCCCGCCAGAATCACCGGAGCCGCCAGCgg < 2:6336502/93‑1 (MQ=255)
gCTGCCCCCTACCGCTGAGGCGATCGTCGCGGTACCAATGTTGATAATCACCGAAGTTCGCACGCCCGCCAGAATCACCGGAGCCGCCAGCgg < 1:4552935/93‑1 (MQ=255)
tGGCCCCTACCGCTGAGGCGATCGTCGCCGTACCAATGTTGATAATCACCGAAGTTCGCACGCCCGCCAGAATCACCGGAGCCGCCAGCGGTa > 1:6370266/1‑93 (MQ=255)
tGGCCCCTACCGCTGAGGCGATCGTCGCCGTACCAATGTTGATAATCACCGAAGTTCGCACGCCCGCCAGAATCACCGGAGCCGCCAGCGGTa < 1:5223897/93‑1 (MQ=255)
tGGCCCCTACCGCTGAGGCGATCGTCGCCGTACCAATGTTGATAATCACCGAAGTTCGCACGCCCGCCAGAATCACCGGAGCCGCCAGCGGTa > 2:6287654/1‑93 (MQ=255)
ggCCCCTACCGCTGAGGCGATCGTCGCCGTACCAATGTTGATAATCACCGAAGTTCGCACGCCCGCCAGAATCACCGGAGCCGCCAGCGGTAg > 1:2343062/1‑93 (MQ=255)
cccTACCGTTGAGGCGATCGTCGCCGTACCAATGTTGATAATCACCGAAGTTCGCACGCCCGCCAGAATCACCGGAGCCGCCAGCGGTAGCTc > 2:5774488/1‑93 (MQ=255)
cccTACCGCTGAGGCGATCGTCGCCGTACCAATGTTGATAATCACCGAAGTTCGCACGCCCGCCAGAATCACCGGAGCCGCCAGCGGTAGCTc > 2:1360561/1‑93 (MQ=255)
cccTACCGCTGAGGCGATCGTCGCCGTACCAATGTTGATAATCACCGAAGTTCGCACGCCCGCCAGAATCACCGGAGCCGCCAGCGGTAGCTc > 1:5702554/1‑93 (MQ=255)
ccTACCGCTGAGGCGATCGTCGCCGTACCAATGTTGATAATCACCGAAGTTCGCACGCCCGCCAGAATCACCGGAGCCGCCAGCGGTAGCTCg > 2:5934735/1‑93 (MQ=255)
tACCGCTGAGGCGATCGTCGCCGTACCAATGTTGATAATCACCGAAGTTCGCACGCCCGCCAGAATCACCGGAGCCGCCAGCGGTAGCTCGAc < 2:2738615/93‑1 (MQ=255)
ccGTTGAGGCGATCGTCGCCGTACCAATGTTGATAATCACCGAAGTTCGCACGCCCGCCAGAATCACCGGAGCCGCCAGCGGTAGCTCGACCt > 2:2046355/1‑93 (MQ=255)
ccGCTGAGGCGATCGTCGCCGTACCAATGTTGATAATCACCGAAGTTCGCACGCCCGCCAGAATCACCGGAGCCGCCAGCGGTAGCTCGACCt > 2:3713089/1‑93 (MQ=255)
ccGCTGAGGCGATCGTCGCCGTACCAATGTTGATAATCACCGAAGTTCGCACGCCCGCCAGAATCACCGGAGCCGCCAGCGGTAGCTCGACCt < 1:1758710/93‑1 (MQ=255)
|
CCACCAGTAACGCCCCCTGGATCACATACGCGGTATTAAATCCGCTAAGCCCGATGATGATGGGCGTACCCAGCGTGCTGGCCCCTACCGTTGAGGCGATCGTCGCCGTACCAATGTTGATAATCACCGAAGTTCGCACGCCCGCCAGAATCACCGGAGCCGCCAGCGGTAGCTCGACCTT > NC_000913/2213836‑2214016
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
TGCCACCAGTAACGCCCCCTGGATCACATACGCGGTATTAAATCCGCTAAGCCCGATGATGATGGGCGTACCCAGCGTGCTGGCCCCTACCGTTGAGGCGATCGTCGCCGTACCAATGTTGATAATCACCGAAGTTCGCACGCCCGCCAGAATCACCGGAGCCGCCAGCGGTAGCTCGACCTTACG > NC_000913/2213834‑2214019
|
TGCCACCAGTAACGCCCCCTGGATCACATACGCGGTATTAAATCCGCTAAGCCCGATGATGATGGGCGTACCCAGCGTGCTGGCCCCTACCGCT > SRR4302547.4389789/1‑94 (MQ=60)
GCCACCAGTAACGCCCCCTGGATCACATACGCGGTATTAAATCCGCTAAGCCCGATGATGATGGGCGTACCCAGCGTGCTGGCCCCTACCGCTG > SRR4302547.2846345/1‑94 (MQ=60)
CACCAGTAACGCCCCCTGGATCACATACGCGGTATTAAATCCGCTAAGCCCGATGATGATGGGCGTACCCAGCGTGCTGGCCCCTACCGTTGAG < SRR4302547.4352904/94‑1 (MQ=60)
CACCAGTAACGCCCCCTGGATCACATACGCGGTATTAAATCCGCTAAGCCCGATGATGATGGGCGTACCCAGCGTGCTGGCCCCTACCGCTGAG < SRR4302547.6716980/94‑1 (MQ=60)
CACCAGTAACGCCCCCTGGATCACATACGCGGTATTAAATCCGCTAAGCCCGATGATGATGGGCGTACCCAGCGTGCTGGCCCCTACCGCTGAG < SRR4302547.4369831/94‑1 (MQ=60)
ACCAGTAACGCCCCCTGGATCACATACGCGGTATTAAATCCGCTAAGCCCGATGATGATGGGCGTACCCAGCGTGCTGGCCCCTACCGCTGAGG > SRR4302547.2200791/1‑94 (MQ=60)
ACCAGTAACGCCCCCTGGATCACATACGCGGTATTAAATCCGCTAAGCCCGATGATGATGGGCGTACCCAGCGTGCTGGCCCCTACCGCTGAGG < SRR4302547.313822/94‑1 (MQ=60)
CCAGTAACGCCCCCTGGATCACATACGCGGTATTAAATCCGCTAAGCCCGATGATGATGGGCGTACCCAGCGTGCTGGCCCCTACCGCTGAGGC > SRR4302547.3184463/1‑94 (MQ=60)
CAGTAACGCCCCCTGGATCACATACGCGGTATTAAATCCGCTAAGCCCGATGATGATGGGCGTACCCAGCGTGCTGGCCCCTACCGCTGAGGCG < SRR4302547.3613376/94‑1 (MQ=60)
AGTAACGCCCCCTGGATCACATACGCGGTATTAAATCCGCTAAGCCCGATGATGATGGGCGTACCCAGCGTGCTGGCCCCTACCGCTGAGGCGA > SRR4302547.489885/1‑94 (MQ=60)
GTAACGCCCCCTGGATCACATACGCGGTATTAAATCCGCTAAGCCCGATGATGATGGGCGTACCCAGCGTGCTGGCCCCTACCGCTGAGGCGAT < SRR4302547.6487486/94‑1 (MQ=60)
GTAACGCCCCCTGGATCACATACGCGGTATTAAATCCGCTAAGCCCGATGATGATGGGCGTACCCAGCGTGCTGGCCCCTACCGCTGAGGCGAT < SRR4302547.4671785/94‑1 (MQ=60)
TAACGCCCCCTGGATCACATACGCGGTATTAAATCCGCTAAGCCCGATGATGATGGGCGTACCCAGCGTGCTGGCCCCTACCGCTGAGGCGATC < SRR4302547.4825120/94‑1 (MQ=60)
AACGCCCCCTGGATCACATACGCGGTATTAAATCCGCTAAGCCCGATGATGATGGGCGTACCCAGCGTGCTGGCCCCTACCGCTGAGGCGATCG < SRR4302547.2482173/94‑1 (MQ=60)
AACGCCCCCTGGATCACATACGCGGTATTAAATCCGCTAAGCCCGATGATGATGGGCGTACCCAGCGTGCTGGCCCCTACCGCTGAGGCGATCG < SRR4302547.2381048/94‑1 (MQ=60)
AACGCCCCCTGGATCACATACGCGGTATTAAATCCGCTAAGCCCGATGATGATGGGCGTACCCAGCGTGCTGGCCCCTACCGCTCAGGCGATCG < SRR4302547.6638277/94‑1 (MQ=60)
CGCCCCCTGGATCACATACGCGGTATTAAATCCGCTAAGCCCGATGATGATGGGCGTACCCAGCGTGCTGGCCCCTACCGTTGAGGCGATCGTC < SRR4302547.5767316/94‑1 (MQ=60)
CGCCCCCTGGATCACATACGCGGTATTAAATCCGCTAAGCCCGATGATGATGGGCGTACCCAGCGTGCTGGCCCCTACCGCTGAGGCGATCGTC < SRR4302547.3230951/94‑1 (MQ=60)
CGCCCCCTGGATCACATACGCGGTATTAAATCCGCTAAGCCCGATGATGATGGGCGTACCCAGCGTGCTGGCCCCTACCGCTGAGGCGATCGTC < SRR4302547.6354536/94‑1 (MQ=60)
CGCCCCCTGGATCACATACGCGGTATTAAATCCGCTAAGCCCGATGATGATGGGCGTACCCAGCGTGCTGGCCCCTACCGCTGAGGCGATCGTC < SRR4302547.4936403/94‑1 (MQ=60)
CCCCCTGGATCACATACGCGGTATTAAATCCGCTAAGCCCGATGATGATGGGCGTACCCAGCGTGCTGGCCCCTACCGCTGAGGCGATCGTCGC > SRR4302547.3888562/1‑94 (MQ=60)
CCCCCTGGATCACATACGCGGTATTAAATCCGCTAAGCCCGATGATGATGGGCGTACCCAGCGTGCTGGCCCCTACCGCTGAGGCGATCGTCGC > SRR4302547.1957434/1‑94 (MQ=60)
CCCCTGGATCACATACGCGGTATTAAATCCGCTAAGCCCGATGATGATGGGCGTACCCAGCGTGCTGGCCCCTACCGCTGAGGCGATCGTCGCC > SRR4302547.5228130/1‑94 (MQ=60)
CCCCTGGATCACATACGCGGTATTAAATCCGCTAAGCCCGATGATGATGGGCGTACCCAGCGTGCTGGCCCCTACCGCTGAGGCGATCGTCGCC < SRR4302547.4845881/94‑1 (MQ=60)
CCCTGGATCACATACGCGGTATTAAATCCGCTAAGCCCGATGATGATGGGCGTACCCAGCGTGCTGGCCCCTACCGCTGAGGCGATCGTCGCCG < SRR4302547.802875/94‑1 (MQ=60)
CCCTGGATCACATACGCGGTATTAAATCCGCTAAGCCCGATGATGATGGGCGTACCCAGCGTGCTGGCCCCTACCGCTGAGGCGATCGTCGCCG > SRR4302547.124400/1‑94 (MQ=60)
CCTGGATCACATACGCGGTATTAAATCCGCTAAGCCCGATGATGATGGGCGTACCCAGCGTGCTGGCCCCTACCGCTGAGGCGATCGTCGCCGT > SRR4302547.2454600/1‑94 (MQ=60)
CTGGATCACATACGCGGTATTAAATCCGCTAAGCCCGATGATGATGGGCGTACCCAGCGTGCTGGCCCCTACCGCTGAGGCGATCGTCGCCGTA > SRR4302547.1517574/1‑94 (MQ=60)
TGGATCACATACGCGGTATTAAATCCGCTAAGCCCGATGATGATGGGCGTACCCAGCGTGCTGGCCCCTACCGCTGAGGCGATCGTCGCCGTAC > SRR4302547.5146739/1‑94 (MQ=60)
GGATCACATACGCGGTATTAAATCCGCTAAGCCCGATGATGATGGGCGTACCCAGCGTGCTGGCCCCTACCGCTGAGGCGATCGTCGCCGTACC > SRR4302547.2626787/1‑94 (MQ=60)
GGATCACATACGCGGTATTAAATCCGCTAAGCCCGATGATGATGGGCGTACCCAGCGTGCTGGCCCCTACCGCTGAGGCGATCGTCGCCGTACC > SRR4302547.6483886/1‑94 (MQ=60)
GATCACATACGCGGTATTAAATCCGCTAAGCCCGATGATGATGGGCGTACCCAGCGTGCTGGCCCCTACCGCTGAGGCGATCGTCGCCGTACCA > SRR4302547.2561391/1‑94 (MQ=60)
GATCACATACGCGGTATTAAATCCGCTAAGCCCGATGATGATGGGCGTACCCAGCGTGCTGGCCCCTACCGCTGAGGCGATCGTCGCCGTACCA < SRR4302547.4418476/94‑1 (MQ=60)
GATCACATACGCGGTATTAAATCCGCTAAGCCCGATGATGATGGGCGTACCCAGCGTGCTGGCCCCTACCGCTGAGGCGATCGTCGCCGTACCA > SRR4302547.3148022/1‑94 (MQ=60)
ATCACATACGCGGTATTAAATCCGCTAAGCCCGATGATGATGGGCGTACCCAGCGTGCTGGCCCCTACCGTTGAGGCGATCGTCGCCGTACCAA < SRR4302547.6060134/94‑1 (MQ=60)
ACATACGCGGTATTAAATCCGCTAAGCCCGATGATGATGGGCGTACCCAGCGTGCTGGCCCCTACCGCTGAGGCGATCGTCGCCGTACCAATGT > SRR4302547.1909746/1‑94 (MQ=60)
CATACGCGGTATTAAATCCGCTAAGCCCGATGATGATGGGCGTACCCAGCGTGCTGGCCCCTACCGCTGAGGCGATCGTCGCCGTACCAATGTT > SRR4302547.6167931/1‑94 (MQ=60)
ATACGCGGTATTAAATCCGCTAAGCCCGATGATGATGGGCGTACCCAGCGTGCTGGCCCCTACCGCTGAGGCGATCGTCGCCGTACCAATGTTG > SRR4302547.6506089/1‑94 (MQ=60)
TACGCGGTATTAAATCCGCTAAGCCCGATGATGATGGGCGTACCCAGCGTGCTGGCCCCTACCGCTGAGGCGATCGTCGCCGTACCAATGTTGA < SRR4302547.1818590/94‑1 (MQ=60)
ACGCGGTATTAAATCCGCTAAGCCCGATGATGATGGGCGTACCCAGCGTGCTGGCCCCTACCGTTGAGGCGATCGTCGCCGTACCAATGTTGAT < SRR4302547.2961423/94‑1 (MQ=60)
ACGCGGTATTAAATCCGCTAAGCCCGATGATGATGGGCGTACCCAGCGTGCTGGCCCCTACCGCTGAGGCGATCGTCGCCGTACCAATGTTGAT > SRR4302547.6464184/1‑94 (MQ=60)
ACGCGGTATTAAATCCGCTAAGCCCGATGATGATGGGCGTACCCAGCGTGCTGGCCCCTACCGCTGAGGCGATCGTCGCCGTACCAATGTTGAT < SRR4302547.6715796/94‑1 (MQ=60)
GCGGTATTAAATCCGCTAAGCCCGATGATGATGGGCGTACCCAGCGTGCTGGCCCCTACCGCTGAGGCGATCGTCGCCGTACCAATGTTGATAA < SRR4302547.5089210/94‑1 (MQ=60)
GCGGTATTAAATCCGCTAAGCCCGATGATGATGGGCGTACCCAGCGTGCTGGCCCCTACCGCTGAGGCGATCGTCGCCGTACCAATGTTGATAA < SRR4302547.3311069/94‑1 (MQ=60)
GCGGTATTAAATCCGCTAAGCCCGATGATGATGGGCGTACCCAGCGTGCTGGCCCCTACCGCTGAGGCGATCGTCGCCGTACCAATGTTGATAA > SRR4302547.6722895/1‑94 (MQ=60)
TATTAAATCCGCTAAGCCCGATGATGATGGGCGTACCCAGCGTGCTGGCCCCTACCGCTGAGGCGATCGTCGCCGTACCAATGTTGATAATCAC < SRR4302547.4965396/94‑1 (MQ=60)
TATTAAATCCGCTAAGCCCGATGATGATGGGCGTACCCAGCGTGCTGGCCCCTACCGCTGAGGCGATCGTCGCCGTACCAATGTTGATAATCAC > SRR4302547.3263982/1‑94 (MQ=60)
ATTAAATCCGCTAAGCCCGATGATGATGGGCGTGCCCAGCGTGCTGGCCCCTGCCGCTGAGGCGATCGTCGCCGTACCAATGTTGATAATCACC < SRR4302547.169118/94‑1 (MQ=60)
ATTAAATCCGCTAAGCCCGATGATGATGGGCGTACCCAGCGTGCTGGCCCCTACCGCTGAGGCGATCGTCGCCGTACCAATGTTGATAATCACC > SRR4302547.6396903/1‑94 (MQ=60)
ATTAAATCCGCTAAGCCCGATGATGATGGGCGTACCCAGCGTGCTGGCCCCTACCGCTGAGGCGATCGTCGCCGTACCAATGTTGATAATCACC > SRR4302547.3880177/1‑94 (MQ=60)
TTAAATCCGCTAAGCCCGATGATGATGGGCGTACCCAGCGTGCTGGCCCCTACCGCTGAGGCGACCGTCGCCGTACCAATGTTGATAATCACCG > SRR4302547.6664891/1‑94 (MQ=60)
TAAATCCGCTAAGCCCGATGATGATGGGCGTACCCAGCGTGCTGGCCCCTACCGCTGAGGCGATCGTCGCCGTACCAATGTTGATAATCACCGA > SRR4302547.2409424/1‑94 (MQ=60)
AAATCCGCTAAGCCCGATGATGATGGGCGTACCCAGCGTGCTGGCCCCTACCGCTGAGGCGATCGTCGCCGTACCAATGTTGATAATCACCGAA < SRR4302547.5137934/94‑1 (MQ=60)
AATCCGCTAAGCCCGATGATGATGGGCGTACCCAGCGTGCTGGCCCCTACCGCTGAGGCGATCGTCGCCGTACCAATGTTGATAATCACCGAAG < SRR4302547.5736823/94‑1 (MQ=60)
AATCCGCTAAGCCCGATGATGATGGGCGTACCCAGCGTGCTGGCCCCTACCGCTGAGGCGATCGTCGCCGTACCAATGTTGATAATCACCGAAG < SRR4302547.2705130/94‑1 (MQ=60)
ATCCGCTAAGCCCGATGATGATGGGCGTACCCAGCGTGCTGGCCCCTACCGCTGAGGCGATCGTCGCCGTACCAATGTTGATAATCACCGAAGT > SRR4302547.4947316/1‑94 (MQ=60)
ATCCGCTAAGCCCGATGATGATGGGCGTACCCAGCGTGCTGGCCCCTACCGCTGAGGCGATCGTCGCCGTACCAATGTTGATAATCACCGAAGT > SRR4302547.1162960/1‑94 (MQ=60)
ATCCGCTAAGCCCGATGATGATGGGCGTACCCAGCGTGCTGGCCCCTACCGCTGAGGCGATCGTCGCCGTACCAATGTTGATAATCACCGAAGT > SRR4302547.3956619/1‑94 (MQ=60)
ATCCGCTAAGCCCGATGATGATGGGCGTACCCAGCGTGCTGGCCCCTACCGCTGAGGCGATCGTCGCCGTACCAATGTTGATAATCACCGAAGT > SRR4302547.1310659/1‑94 (MQ=60)
TCCGCTAAGCCCGATGATGATGGGCGTACCCAGCGTGCTGGCCCCTACCGCTGAGGCGATCGTCGCCGTACCAATGTTGATAATCACCGAAGTT < SRR4302547.1979626/94‑1 (MQ=60)
CCGCTAAGCCCGATGATGATGGGCGTACCCAGCGTGCTGGCCCCTACCGCTGAGGCGATCGTCGCCGTACCAATGTTGATAATCACCGAAGTTC < SRR4302547.2255151/94‑1 (MQ=60)
CCGCTAAGCCCGATGATGATGGGCGTACCCAGCGTGCTGGCCCCTACCGCTGAGGCGATCGTCGCCGTACCAATGTTGATAATCACCGAAGTTC < SRR4302547.2543156/94‑1 (MQ=60)
CCGCTAAGCCCGATGATGATGGGCGTACCCAGCGTGCTGGCCCCTACCGCTGAGGCGATCGTCGCCGTACCAATGTTGATAATCACCGAAGTTC > SRR4302547.2743051/1‑94 (MQ=60)
CGCTAAGCCCGATGATGATGGGCGTACCCAGCGTGCTGGCCCCTACCGCTGAGGCGATCGTCGCCGTACCAATGTTGATAATCACCGAAGTTCG < SRR4302547.547521/94‑1 (MQ=60)
CGCTAAGCCCGATGATGATGGGCGTACCCAGCGTGCTGGCCCCTACCGCTGAGGCGATCGTCGCCGTACCAATGTTGATAATCACCGAAGGTCG > SRR4302547.5944635/1‑94 (MQ=60)
GCTAAGCCCGATGATGATGGGCGTACCCAGCGTGCTGGCCCCTACCGTTGAGGCGATCGTCGCCGTACCAATGTTGATAATCACCGAAGTTCGC < SRR4302547.5216633/94‑1 (MQ=60)
GCTAAGCCCGATGATGATGGGCGTACCCAGCGTGCTGGCCCCTACCGCTGAGGCGATCGTCGCCGTACCAATGTTGATAATCACCGAAGTTCGC < SRR4302547.1454501/94‑1 (MQ=60)
CTAAGCCCGATGATGATGGGCGTACCCAGCGTGCTGGCCCCTACCGTTGAGGCGATCGTCGCCGTACCAATGTTGATAATCACCGAAGTTCGCA > SRR4302547.1606665/1‑94 (MQ=60)
CTAAGCCCGATGATGATGGGCGTACCCAGCGTGCTGGCCCCTACCGTTGAGGCGATCGTCGCCGTACCAATGTTGATAATCACCGAAGTTCGCA > SRR4302547.3559777/1‑94 (MQ=60)
TAAGCCCGATGATGATGGGCGTACCCAGCGTGCTGGCCCCTACCGCTGAGGCGATCGTCGCCGTACCAATGTTGATAATCACCGAAGTTCGCAC > SRR4302547.3321734/1‑94 (MQ=60)
AGCCCGATGATGATGGGCGTACCCAGCGTGCTGGCCCCTACCGCTGAGGCGATCGTCGCCGTACCAATGTTGATAATCACCGAAGTTCGCACGC < SRR4302547.1955346/94‑1 (MQ=60)
CCCGATGATGATGGGCGTACCCAGCGTGCTGGCCCCTACCGCTGAGGCGATCGTCGCCGTACCAATGTTGATAATCACCGAAGTTCGCACGCCC < SRR4302547.2796417/94‑1 (MQ=60)
CCCGATGATGATGGGCGTACCCAGCGTGCTGGCCCCTACCGCTGAGGCGATCGTCGCCGTACCAATGTTGATAATCACCGAAGTTCGCACGCCC < SRR4302547.6010908/94‑1 (MQ=60)
CCGATGATGATGGGCGTACCCAGCGTGCTGGCCCCTACCGCTGAGGCGATCGTCGCCGTACCAATGTTGATAATCACCGAAGTTCGCACGCCCG > SRR4302547.1643108/1‑94 (MQ=60)
GATGATGATGGGCGTACCCAGCGTGCTAGCCCCTACCGCTGAGGCGATCGGCGCCGTACCAATGTTGATAATCACCGAAGTTCGCACGCCCGCC > SRR4302547.6154415/1‑94 (MQ=60)
ATGATGATGGGCGTACCCAGCGTGCTGGCCCCTACCGCTGAGGCGATCGTCGCCGTACCAATGTTGATAATCACCGAAGTTCGCACGCCCGCCA > SRR4302547.5092057/1‑94 (MQ=60)
TGATGATGGGCGTACCCAGCGTGCTGGCCCCTACCGCTGAGGCGATCGTCGCCGTACCAATGTTGATAATCACCGAAGTTCGCACGCCCGCCAG > SRR4302547.5420876/1‑94 (MQ=60)
GTGATGCGCGTACCCAGCGTGCTGGCCCCTACCGCTGAGGCGATCGTCGCCGTACCAATGTTGATAATCACCGAAGTTCGCACGCCCGCCAGAA < SRR4302547.3220509/94‑1 (MQ=60)
ATGATGGGCGTACCCAGCGTGCTGGCCCCTACCGCTGAGGCGATCGTCGCCGTACCAATGTTGATAATCACCGAAGTTCGCACGCCCGCCAGAA < SRR4302547.3324311/94‑1 (MQ=60)
ATGATGGGCGTACCCAGCGTGCTGGCCCCTACCGCTGAGGCGATCGTCGCCGTACCAATGTTGATAATCACCGAAGTTCGCACGCCCGCCAGAA < SRR4302547.3325239/94‑1 (MQ=60)
ATGATGGGCGTACCCAGCGTGCTGGCCCCTACCGCTGAGGCGATCGTCGCAGTACCAATGTTGATAATCACCGAAGTTCGCACGCCCGCCAGAA > SRR4302547.6691517/1‑94 (MQ=60)
TGATGGGCGTACCCAGCGTGCTGGCCCCTACCGCTGAGGCGATCGTCGCCGTACCAATGTTGATAATCACCGAAGTTCGCACGCCCGCCAGAAT > SRR4302547.4425353/1‑94 (MQ=60)
TGATGGGCGTACCCAGCGTGCTGGCCCCTACCGCTGAGGCGATCGTCGCCGTACCAATGTTGATAATCACCGAAGTTCGCACGCCCGCCAGAAT > SRR4302547.3232779/1‑94 (MQ=60)
GATGGGCGTACCCAGCGTGCTGGCCCCTACCGCTGAGGCGATCGTCGCCGTACCAATGTTGATAATCACCGAAGTTCGCACGCCCGCCAGAATC < SRR4302547.4924747/94‑1 (MQ=60)
ATGGGCGTACCCAGCGTGCTGGCCCCTACCGCTGAGGCGATCGTCGCCGTACCAATGTTGATAATCACCGAAGTTCGCACGCCCGCCAGAATCA < SRR4302547.619845/94‑1 (MQ=60)
ATGGGCGTACCCAGCGTGCTGGCCCCTACCGCTGAGGCGATCGTCGCCGTACCAATGTTGATAATCACCGAAGTTCGCACGCCCGCCAGAATCA > SRR4302547.1549473/1‑94 (MQ=60)
GGGCGTACCCAGCGTGCTGGCCCCTACCGTTGAGGCGATCGTCGCCGTACCAATGTTGATAATCACCGAAGTTCGCACGCCCGCCAGAATCACC < SRR4302547.1457781/94‑1 (MQ=60)
GGGCGTACCCAGCGTGCTGCCCCCTACCGCTGAGGCGATCGTCGCCGTACCAATGTTGATAATCACCGAAGTTCGCACGCCCGCCAGAATCACC < SRR4302547.4044724/94‑1 (MQ=60)
GGCGTACCCGGCGTGCTGGCCCCTACCGCTGAGGCGATCGTCGCCGTACCAATGTTGATAATCACCGAAGTTCGCACGCCCGCCAGAATCACCG < SRR4302547.160862/94‑1 (MQ=60)
GGCGTACCCAGCGTGCTGGCCCCTACCGCTGAGGCGATCGTCGCCGTACCAATGTTGATAATCACCGAAGTTCGCACGCCCGCCAGAATCACCG < SRR4302547.910066/94‑1 (MQ=60)
GCGTACCCAGCGTGCTGGCCCCTACCGCTGAGGCGATCGTCGCCGTACCAATGTTGATAATCACCGAAGTTCGCACGCCCGCCAGAATCACCGG > SRR4302547.1209537/1‑94 (MQ=60)
GCGTACCCAGCGTGCTGGCCCCTACCGCTGAGGCGATCGTCGCCGTACCAATGTTGATAATCACCGAAGTTCGCACGCCCGCCAGAATCACCGG < SRR4302547.4342484/94‑1 (MQ=60)
CGTACCCAGCGTGCTGGCCCCTACCGCTGAGGCGATCGTCGCCGTACCAATGTTGATAATCACCGAAGTTCGCACGCCCGCCAGAATCACCGGA < SRR4302547.2940585/94‑1 (MQ=60)
CGTACCCAGCGTGCTGGCCCCTACCGCTGACGCGATCGTCGACGTACCAATGTTGATAATCACCGAAGTTAGCACGCCCGCCAGAATCACCGGA > SRR4302547.939913/1‑94 (MQ=60)
GTCCCCAGCGTGCTGGCCCCTACCGCTGAGGCGATCGTCGCCGTACCAATGTTGATAATCACCGAAGTTCGCACGCCCGCCAGAATCACCGGAG < SRR4302547.5012597/94‑1 (MQ=60)
GTACCCAGCGTGCTGGCCCCTACCGCTGAGGCGATCGTCGCCGTACCAATGTTGATAATCACCGAAGTTCGCACGCCCGCCAGAATCACCGGAG > SRR4302547.4012760/1‑94 (MQ=60)
CTACCCAGCGTGCTGCCCCCTACCGCTGAGGCGATCGTCGCCGTACCAATGTTGATAATCACCGAAGTTCGCACGCCCGCCAGAATCACCGGAG < SRR4302547.5173215/94‑1 (MQ=60)
TACCCAGCGTGCTGGCCCCTACCGCTGAGGCGATCGTCGCCGTACCAATGTTGATAATCACCGAAGTTCGCACGCCCGCCAGAATCACCGGAGC < SRR4302547.6527732/94‑1 (MQ=60)
CCCAGCGTGCTGGCCCCTACCGCTGAGGCGATCGTCGCCGTACCAATGTTGATAATCACCGAAGTTCGCACGCCCGCCAGAATCACCGGAGCCG > SRR4302547.2867911/1‑94 (MQ=60)
CCCAGCGTGCTGGCCCCTACCGCTGAGGCGATCGTCGCCGTACCAATGTTGATAATCACCGAAGTTCGCACGCCCGCCAGAATCACCGGAGCCG > SRR4302547.1356747/1‑94 (MQ=60)
CCAGCGTGCTGGCCCCTACCGCTGAGGCGATCGTCGCCGTACCAATGTTGATAATCACCGAAGTTCGCACGCCCGCCAGAATCACCGGAGCCGC > SRR4302547.1167275/1‑94 (MQ=60)
CAGCGTGCTGGCCCCTACCGCTGAGGCGATCGTCGCCGTGCCAATGTTGATAATCACCGAAGTTCGCACGCCCGCCAGAATCACCGGAGCCGCC < SRR4302547.6480659/94‑1 (MQ=60)
AGCGTGCGGGCCCCTACCGCTGAGGCGATCGTCGCCGTACCAATGTTGATAATCACCGAAGTTCGCTCGCCCGCCAGAATCACCGGAGCCGCCA < SRR4302547.3408765/94‑1 (MQ=60)
CGTGCTGGCCCCTACCGCTGAGGCGATCGTCGCCGTACCAATGTTGATAATCACCGAAGTTCGCACGCCCGCCAGAATCACCGGAGCCGCCAGC > SRR4302547.3797839/1‑94 (MQ=60)
GTGCTGGCCCCTACCGTTGAGGCGATCGTCGCCGTACCAATGTTGATAATCACCGAAGTTCGCACGCCCGCCAGAATCACCGGAGCCGCCAGCG < SRR4302547.4200042/94‑1 (MQ=60)
GTGCTGCCCCCTACCGCTGAGGCGATCGTCGCCGTACCAATGTTGATAATCACCGAAGTTCGCACGCCCGCCAGAATCACCGGAGCCGCCAGCG < SRR4302547.2954496/94‑1 (MQ=60)
TGCTGGCCCCTACCGCTGAGGCGATCGTCGCCGTACCAATGTTGATAATCACCGAAGTTCGCACGCCCGCCAGAATCACCGGAGCCGCCAGCGG > SRR4302547.6188669/1‑94 (MQ=60)
TGCTGGCCCCTACCGCTGAGGCGATCGTCGCCGTACCAATGTTGATAATCACCGAAGTTCGCACGCCCGCCAGAATCACCGGAGCCGCCAGCGG < SRR4302547.433473/94‑1 (MQ=60)
GCTGCCCCCTACCGCTGAGGCGATCGTCGCGGTACCAATGTTGATAATCACCGAAGTTCGCACGCCCGCCAGAATCACCGGAGCCGCCAGCGGT < SRR4302547.4647113/94‑1 (MQ=60)
CTGGCCCCTACCGCTGAGGCGATCGTCGCCGTACCAATGTTGATAATCACCGAAGTTCGCACGCCCGCCAGAATCACCGGAGCCGCCAGCGGTA > SRR4302547.6503178/1‑94 (MQ=60)
CTGGCCCCTACCGCTGAGGCGATCGTCGCCGTACCAATGTTGATAATCACCGAAGTTCGCACGCCCGCCAGAATCACCGGAGCCGCCAGCGGTA < SRR4302547.662042/94‑1 (MQ=60)
TGGCCCCTACCGCTGAGGCGATCGTCGCCGTACCAATGTTGATAATCACCGAAGTTCGCACGCCCGCCAGAATCACCGGAGCCGCCAGCGGTAG > SRR4302547.2390543/1‑94 (MQ=60)
TGGCCCCTACCGCTGAGGCGATCGTCGCCGTACCAATGTTGATAATCACCGAAGTTCGCACGCCCGCCAGAATCACCGGAGCCGCCAGCGGTAG < SRR4302547.5331425/94‑1 (MQ=60)
CCCCTACCGCTGAGGCGATCGTCGCCGTACCAATGTTGATAATCACCGAAGTTCGCACGCCCGCCAGAATCACCGGAGCCGCCAGCGGTAGCTC > SRR4302547.5820351/1‑94 (MQ=60)
CCCTCCCGCTGAGGCGATCGTCGCCGTACCAATGTTGATAATCACCGAAGTTCGCACGCCCGCCAGAATCACCGGAGCCGCCAGCGGTAGCTCG < SRR4302547.4836542/94‑1 (MQ=60)
CCTACCGCTGAGGCGATCGTCGCCGTACCAATGTTGATAATCACCGAAGTTCGCACGCCCGCCAGAATCACCGGAGCCGCCAGCGGTAGCTCGA < SRR4302547.4921999/94‑1 (MQ=60)
CCGCTGAGGCGATCGTCGCCGTACCAATGTTGATAATCACCGAAGTTCGCACGCCCGCCAGAATCACCGGAGCCGCCAGCGGTAGCTCGACCTT > SRR4302547.491187/1‑94 (MQ=60)
CCGCTGAGGCGATCGTCGCCGTACCAATGTTGATAATCACCGAAGTTCGCACGCCCGCCAGAATCACCGGAGCCGCCAGCGGTAGCTCGACCTT < SRR4302547.814541/94‑1 (MQ=60)
CCGCTGAGGCGATCGTCGCCGTACCAATGTTGATAATCACCGAAGTTCGCACGCCCGCCAGAATCACCGGAGCCGCCAGCGGTAGCTCGACCTT < SRR4302547.1793551/94‑1 (MQ=60)
CGCTGAGGCGATCGTCGCCGTACCAATGTTGATAATCACCGAAGTTCGCACGCCCGCCAGAATCACCGGAGCCGCCAGCGGTAGCTCGACCTTA > SRR4302547.498044/1‑94 (MQ=60)
GCTGAGGCGATCGTCGCCGTACCAATGTTGATAATCACCGAAGTTCGCACGCCCGCCAGAATCACCGGAGCCGCCAGCGGTAGCTCGACCTTAC < SRR4302547.4582354/94‑1 (MQ=60)
GCTGAGGCGATCGTCGCCGTACCAATGTTGATAATCACCGAAGTTCGCACGCCCGCCAGAATCACCGGAGCCGCCAGCGGTAGCTCGACCTTAC > SRR4302547.4008638/1‑94 (MQ=60)
CTGAGGCGATCGTCGCCGTACCAATGTTGATAATCACCGAAGTTCGCACGCCCGCCAGAATCACCGGAGCCGCCAGCGGTAGCTCGACCTTACG < SRR4302547.5822349/94‑1 (MQ=60)
CTGAGGCGATCGTCGCCGTACCAATGTTGATAATCACCGAAGTTCGCACGCCCGCCAGAATCACCGGAGCCGCCAGCGGTAGCTCGACCTTACG > SRR4302547.2183464/1‑94 (MQ=60)
CTGAGGCGATCGTCGCCGTACCAATGTTGATAATCACCGAAGTTCGCACGCCCGCCAGAATCACCGGAGCCGCCAGCGGTAGCTCGACCTTACG < SRR4302547.1951139/94‑1 (MQ=60)
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TGCCACCAGTAACGCCCCCTGGATCACATACGCGGTATTAAATCCGCTAAGCCCGATGATGATGGGCGTACCCAGCGTGCTGGCCCCTACCGTTGAGGCGATCGTCGCCGTACCAATGTTGATAATCACCGAAGTTCGCACGCCCGCCAGAATCACCGGAGCCGCCAGCGGTAGCTCGACCTTACG > NC_000913/2213834‑2214019
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
