Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
593 |
264.2 |
13311096 |
97.8% |
13018251 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
2,618,556 |
A→G |
Y122H (TAC→CAC) |
upp ← |
uracil phosphoribosyltransferase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 2,618,556 | 0 | A | G | 86.3%
| 551.2
/ 67.9
| 205 | Y122H (TAC→CAC) | upp | uracil phosphoribosyltransferase |
| Reads supporting (aligned to +/- strand): ref base A (15/13); new base G (98/79); total (113/92) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.77e-01 |
Only 100 of 207 total aligned reads displayed.
ATGGTCGCGATAACGGAACCACCGGTTGCCAGCATTGGGTCAACGATCAGCGCCATACGCTCATCGATGTTAGAAACCAGTTTCTGGAAGTACGGTACCGGCTCCAGCGTTTCTTCATTACGGTACATACCGACAACGCTGATGCGCGCGCTCGGAACGTTTTCCAGCACACCGTCCATCATA > NC_000913/2618465‑2618647
|
aTGGTCGCGATAACGGAACCACCGGTTGCCAGCATTGGGTCAACGATCAGCGCCATACGCTCATCGATGTTAGAAACCAGTTTCTGGAAGTAc < 2:1280020/93‑1 (MQ=255)
tGGTCGCGATAACGGAACCACCGGTTGCCAGCATTGGGTCAACGATCAGCGCCATACGCTCATCGATGTTAGAAACCAGTTTCTGGAAGTGCg > 1:3074504/1‑93 (MQ=255)
ggTCGCGATAACGGAACCACCGGTTGCCAGCATTGGGTCAACGATCAGCGCCATACGCTCATCGATGTTAGAAACCAGTTTCTGGAAGTGCgg > 2:3742902/1‑93 (MQ=255)
gTCGCGATAACGGAACCACCGGTTGCCAGCATTGGGTCAACGATCAGCGCCATACGCTCATCGATGTTAGAAACCAGTTTCTGGAAGTGCGGt < 1:812982/93‑1 (MQ=255)
gTCGCGATAACGGAACCACCGGTTGCCAGCATTGGGTCAACGATCAGCGCCATACGCTCATCGATGTTAGAAACCAGTTTCTGGAAGTACgga > 1:2980114/1‑92 (MQ=255)
gTCGCGATAACGGAACCACCGATTGCCAGCATTGGGTCAACGATCAGCGCCATACGCTCATCGATGTTAGAAACCAGTTTCTGGAAGTGCGGt < 1:1704201/93‑1 (MQ=255)
tCGCGATAACGGAACCACCGGTTGCCAGCATTGGGTCAACGATCAGCGCCATACGCTCATCGATGTTAGAAACCAGTTTCTGGAAGTGCGGTa > 1:4175633/1‑93 (MQ=255)
tCGCGATAACGGAACCACCGGTTGCCAGCATTGGGTCAACGATCAGCGCCATACGCTCATCGATGTTAGAAACCAGTTTCTGGAAGTGCGGTa > 2:637370/1‑93 (MQ=255)
cgcgATAACGGAACCACCGGTTGCCAGCATTGGGTCAACGATCAGCGCCATACGCTCATCGATGTTAGAAACCAGTTTCTGGAAGTGCGGTAc < 2:1636012/93‑1 (MQ=255)
cgcgATAACGGAACCACCGGTTGCCAGCATTGGGTCAACGATCAGCGCCATACGCTCATCGATGTTAGAAACCAGTTTCTGGAAGTGCGGTAc < 2:3241294/93‑1 (MQ=255)
cgATAACGGAACCACCGGTTGCCAGCATTGGGTCAACGATCAGCGCCATACGCTCATCGATGTTAGAAACCAGTTTCTGGAAGTGCGGTACCg > 1:3913511/1‑93 (MQ=255)
cgATAACGGAACCACCGGTTGCCAGCATTGGGTCAACGATCAGCGCCATACGCTCATCGATGTTAGAAACCAGTTTCTGGAAGTGCGGTACCg > 2:6081367/1‑93 (MQ=255)
cgACAACGGAACCACCGGTTGCCAGCATTGGGTCAACGATCAGCGCCATACGCTCATCGATGTTAGAAACCAGTTTCTGGAAGTGCGGTACCg < 2:107884/93‑1 (MQ=255)
gATAACGGAACCACCGGTTGCCAGCATTGGGTCAACGATCAGCGCCATACGCTCATCGATGTTAGAAACCAGTTTCTGGAAGTGCGGTACCgg > 2:4932047/1‑93 (MQ=255)
tAACGGAACCACCGGTTGCCAGCATTGGGTCAACGATCAGCGCCATACGCTCATCGATGTTAGAAACCAGTTTCTGGAAGTGCGGTACCGGCt < 2:6156551/93‑1 (MQ=255)
tAACGGAACCACCGGTTGCCAGCATTGGGTCAACGATCAGCGCCATACGCTCATCGATGTTAGAAACCAGTTTCTGGAAGTACGGTACCGGCt < 2:6566111/93‑1 (MQ=255)
aaCGGAACCACCGGTTGCCAGCATTGGGTCAACGATCAGCGCCATACGCTCATCGATGTTAGAAACCAGTTTCTGGAAGTGCGGTACCGGCTc < 1:5213055/93‑1 (MQ=255)
aaCGGAACCACCGGTTGCCAGCATTGGGTCAACGATCAGCGCCATACGCTCATCGATGTTAGAAACCAGTTTCTGGAAGTGCGGTACCGGCTc > 2:5163274/1‑93 (MQ=255)
aaCGGAACCACCGGTTGCCAGCATTGGGTCAACGATCAGCGCCATACGCTCATCGATGTTAGAAACCAGTTTCTGGAAGTACGGTACCGGCTc < 2:1814271/93‑1 (MQ=255)
aCGGAACCACCGGTTGCCAGCATTGGGTCAACGATCAGCGCCATACGCTCATCGATGTTAGAAACCAGTTTCTGGAAGTGCGGTACCGGCTcc > 1:2565302/1‑93 (MQ=255)
cGGAACCACCGGTTGCCAGCATTGGGTCAACGATCAGCGCCATACGCTCATCGATGTTAGAAACCAGTTTCTGGAAGTGCGGTACCGGCTCCa < 1:3716956/93‑1 (MQ=255)
cGGAACCACCGGTTGCCAGCATTGGGTCAACGATCAGCGCCATACGCTCATCGATGTTAGAAACCAGTTTCTGGAAGTACGGTACCGGCTCCa < 2:5601628/93‑1 (MQ=255)
ggAACCACCGGTTGCCAGCATTGGGTCAACGATCAGCGCCATACGCTCATCGATGTTAGAAACCAGTTTCTGGAAGTGCGGTACCGGCTcccg > 2:683277/1‑91 (MQ=255)
gAACCACCGGTTGCCAGCATTGGGTCAACGATCAGCGCCATACGCTCATCGATGTTAGAAACCAGTTTCTGGAAGTGCGGTACCGGCTCCAGc > 2:1547491/1‑93 (MQ=255)
ccaccGGTTGCCAGCATTGGGTCAACGATCAGCGCCATACGCTCATCGATGTTAGAAACCAGTTTCTGGAAGTGCGGTACCGGCTCCAGCGtt < 2:6140126/93‑1 (MQ=255)
caccGGTTGCCAGCATTGGGTCAACGATCAGCGCCATACGCTCATCGATGTTAGAAACCAGTTTCTGGAAGTGCGGTACCGGCTCCAGCGttt > 1:6085960/1‑93 (MQ=255)
caccGGTTGCCAGCATTGGGTCAACGATCAGCGCCATACGCTCATCGATGTTAGAAACCAGTTTCTGGAAGTGCGGTACCGGCTCCAGCGttt > 1:4749149/1‑93 (MQ=255)
caccGGTTGCCAGCATTAGGTCAACGATCAGCGCCATACGCTCATCGATGTTAGAAACCAGTTTCTGGAAGTACGGTACCGGCTCCAGCGttt < 1:5742294/93‑1 (MQ=255)
accGGTTGCCAGCATTGGGTCAACGATCAGCGCCATACGCTCATCGATGTTAGAAACCAGTTTCTGGAAGTGCGGTACCGGCTCCAGCGtttt > 2:257389/1‑92 (MQ=255)
ccGGTTGCCAGCATTGGGTCAACGATCAGCGCCATACGCTCATCGATGTTAGAAACCAGTTTCTGGAAGTGCGGTACCGGCTCCAGCGTttct > 1:1039490/1‑93 (MQ=255)
ccGGTTGCCAGCATTGGGTCAACGATCAGCGCCATACGCTCATCGATGTTAGAAACCAGTTTCTGGAAGTGCGGTACCGGCTCCAGCGTttct > 2:5630241/1‑93 (MQ=255)
ggTTGCCAGCATTGGGTCAACGATCAGCGCCATACGCTCATCGATGTTAGAAACCAGTTTCTGGAAGTGCGGTACCGGCTCCAGCGTttcttc > 1:2755485/1‑93 (MQ=255)
gTTGCCAGCATTGGGTCAACGATCAGCGCCATACGCTCATCGATGTTAGAAACCAGTTTCTGGAAGTGCGGTACCGGCTCCAGCGTTTCTTCa > 1:1619463/1‑93 (MQ=255)
gTTGCCAGCATTGGGTCAACGATCAGCGCCATACGCTCATCGATGTTAGAAACCAGTTTCTGGAAGTACGGTACCGGCTCCAGCGTTTCTTCa > 2:4247247/1‑93 (MQ=255)
ttGCCAGCATTGGGTCAACGATCAGCGCCATACGCTCATCGATGTTAGAAACCAGTTTCTGGAAGTGCGGTACCGGCTCCAGCGTTTCTTCAt < 1:3561119/93‑1 (MQ=255)
gCCAGCATTGGGTCAACGATCAGCGCCATACGCTCATCGATGTTAGAAACCAGTTTCTGGAAGTGCGGTACCGGCTCCAGCGTTTCTTCATTa > 2:3119648/1‑93 (MQ=255)
ccAGCATTGGGTCAACGATCAGCGCCATACGCTCATCGATGTTAGAAACCAGTTTCTGGAAGTGCGGTACCGGCTCCAGCGTTTCTTCATTAc > 2:2845041/1‑93 (MQ=255)
ccAGCATTGGGTCAACGATCAGCGCCATACGCTCATCGATGTTAGAAACCAGTTTCTGGAAGTGCGGTACCGGCTCCAGCGTTTCTTCATTAc > 1:4681122/1‑93 (MQ=255)
cAGCATTGGGTCAACGATCAGCGCCATACGCTCATCGATGTTAGAAACCAGTTTCTGGAAGTGCGGTACCGGCTCCAGCGTTTCTTCATTACg > 1:2503518/1‑93 (MQ=255)
cAGCATTGGGTCAACGATCAGCGCCATACGCTCATCGATGTTAGAAACCAGTTTCTGGAAGTGCGGTACCGGCTCCAGCGTTTCTTCATTACg < 1:4053396/93‑1 (MQ=255)
aGCATTGGGTCAACGATCAGCGCCATACGCTCATCGATGTTAGAAACCAGTTTCTGGAAGTGCGGTACCGGCTCCAGCGTTTCTTCATTACgg < 1:3507989/93‑1 (MQ=255)
gCATTGGGTCAACGATCAGCGCCATACGCTCATCGATGTTAGAAACCAGTTTCTGGAAGTGCGGTACCGGCTCCAGCGTTTCTTCATTACGGt > 1:1368706/1‑93 (MQ=255)
gCATTGGGTCAACGATCAGCGCCATACGCTCATCGATGTTAGAAACCAGTTTCTGGAAGTGCGGTACCGGCTCCAGCGTTTCTTCATTACGGt > 1:464678/1‑93 (MQ=255)
cATTGGGTCAACGATCAGCGCCATACGCTCATCGATGTTAGAAACCAGTTTCTGGAAGTGCGGTACCGGCTCCAGCGTTTCTTCATTACGGTa < 1:5492936/93‑1 (MQ=255)
cATTGGGTCAACGATCAGCGCCATACGCTCATCGATGTTAGAAACCAGTTTCTGGAAGTGCGGTACCGGCTCCAGCGTTTCTTCATTACGGTa < 2:2188573/93‑1 (MQ=255)
aTTGGGTCAACGATCAGCGCCATACGCTCATCGATGTTAGAAACCAGTTTCTGGAAGTGCGGTACCGGCTCCAGCGTTTCTTCATTACGGTAc > 2:1936861/1‑93 (MQ=255)
gTCAACGATCAGCGCCATACGCTCATCGATGTTAGAAACCAGTTTCTGGAAGTGCGGTACCGGCTCCAGCGTTTCTTCATTACGGTACATAcc < 1:1568966/93‑1 (MQ=255)
cAACGATCAGCGCCATACGCTCATCGATGTTAGAAACCAGTTTCTGGAAGTGCGGTACCGGCTCCAGCGTTTCTTCATTACGGTACATACCGa < 1:6200776/93‑1 (MQ=255)
cAACGATCAGCGCCATACGCTCATCGATGTTAGAAACCAGTTTCTGGAAGTGCGGTACCGGCTCCAGCGTTTCTTCATTACGGTACATACCGa < 2:4723687/93‑1 (MQ=255)
aaCGATCAGCGCCATACGCTCATCGATGTTAGAAACCAGTTTCTGGAAGTGCGGTACCGGCTCCAGCGTTTCTTCATTACGGTACATACCGAc > 2:3170835/1‑93 (MQ=255)
aaCGATCAGCGCCATACGCTCATCGATGTTAGAAACCAGTTTCTGGAAGTGCGGTACCGGCTCCAGCGACTCCTTATTACGGGACATACCGAc > 2:6200776/1‑93 (MQ=255)
aCGATCAGCGCCATACGCTCATCGATGTTAGAAACCAGTTTCTGGAAGTGCGGTACCGGCTCCAGCGTTTCTTCATTACGGTACATACCGACa > 1:5886165/1‑93 (MQ=255)
gATCAGCGCCATACGCTCATCGATGTTAGAAACCAGTTTCTGGAAGTGCGGTACCGGCTCCAGCGTTTCTTCATTACGGTACATACCGACAAc > 2:4469160/1‑93 (MQ=255)
tCAGCGCCATACGCTCATCGATGTTAGAAACCAGTTTCTGGAAGTGCGGTACCGGCTCCAGCGTTTCTTCATTACGGTACATACCGACAACGc > 1:6509858/1‑93 (MQ=255)
tCAGCGCCATACGCTCATCGATGTTAGAAACCAGTTTCTGGAAGTGCGGTACCGGCTCCAGCGTTTCTTCATTACGGTACATACCGACAACGc < 1:1793788/93‑1 (MQ=255)
tCAGCGCCATACGCTCATCGATGTTAGAAACCAGTTTCTGGAAGTGCGGTACCGGCTCCAGCGTTTCTTCATTACGGTACATACCGACAACGc < 1:4066561/93‑1 (MQ=255)
cAGCGCCATACGCTCATCGATGTTAGAAACCAGTTTCTGGAAGTGCGGTACCGGCTCCAGCGTTTCTTCATTACGGTACATACCGACAACGCt > 2:2439323/1‑93 (MQ=255)
aGCGCCATACGCTCATCGATGTTAGAAACCAGTTTCTGGAAGTGCGGTACCGGCTCCAGCGTTTCTTCATTACGGTACATACCGACAACGCTg > 2:5485214/1‑93 (MQ=255)
gcCATACGCTCATCGATGTTAGAAACCAGTTTCTGGAAGTGCGGTACCGGCTCCAGCGTTTCTTCATTACGGTACATACCGACAACGCTGATg > 2:3694766/1‑93 (MQ=255)
ccATACGCTCATCGATGTTAGAAACCAGTTTCTGGAAGTGCGGTACCGGCTCCAGCGTTTCTTCATTACGGTACATACCGACAACGCTGATgc < 2:3004547/93‑1 (MQ=255)
ccATACGCTCATCGATGTTAGAAACCAGTTTCTGGAAGTGCGGTACCGGCTCCAGCGTTTCTTCATTACGGTACATACCGACAACGCTGATgc < 1:3821375/93‑1 (MQ=255)
cATACGCTCATCGATGTTAGAAACCAGTTTCTGGAAGTGCGGTACCGGCTCCAGCGTTTCTTCATTACGGTACATACCGACAACGCTGATgcg > 2:1380514/1‑93 (MQ=255)
cATACGCTCATCGATGTTAGAAACCAGTTTCTGGAAGTGCGGTACCGGCTCCAGCGTTTCTTCATTACGGTACATACCGACAACGCTGATgcg < 2:6574256/93‑1 (MQ=255)
cATACGCTCATCGATGTTAGAAACCAGTTTCTGGAAGTGCGGTACCGGCTCCAGCGTTTCTTCATTACGGTACATACCGACAACGCTGATgcg > 1:6045057/1‑93 (MQ=255)
cATACGCTCATCGATGTTAGAAACCAGTTTCTGGAAGTGCGGTACCGGCTCCAGCGTTTCTTCATTACGGTACATACCGACAACGCTGATgcg > 2:43528/1‑93 (MQ=255)
aTACGCTCATCGATGTTAGAAACCAGTTTCTGGAAGTGCGGTACCGGCTCCAGCGTTTCTTCATTACGGTACATACCGACAACGCTGATgcgc > 1:4018903/1‑93 (MQ=255)
tACGCTCATCGATGTTAGAAACCAGTTTCTGGAAGTGCGGTACCGGCTCCAGCGTTTCTTCATTACGGTACATACCGACAACGCTGATgcgcg > 2:172610/1‑93 (MQ=255)
cGCTCATCGATGTTAGAAACCAGTTTCTGGAAGTGCGGTACCGGCTCCAGCGTTTCTTCATTACGGTACATACCGACAACGCTGATgcgcgcg > 2:1689592/1‑93 (MQ=255)
cGCTCATCGATGTTAGAAACCAGTTTCTGGAAGTACGGTACCGGCTCCAGCGTTTCTTCATTACGGTACATACCGACAACGCTGATgcgcgcg > 1:2840763/1‑93 (MQ=255)
gCTCATCGATGTTAGAAACCAGTTTCTGGAAGTGCGGTACCGGCTCCAGCGTTTCTTCATTACGGTACATACCGACAACGCTGATgcgcgcgc < 2:78345/93‑1 (MQ=255)
cTCATCGATGTTAGAAACCAGTTTCTGGAAGTGCGGTACCGGCTCCAGCGTTTCTTCATTACGGTACATACCGACAACGCTGATGCGCGCGCt < 1:4539304/93‑1 (MQ=255)
cTCATCGATGTTAGAAACCAGTATCTGGAAGTGCGGTACCGGCTCCAGCGTTTCTTCATTACGGTACATACCGACAACGCTGATGCGCGCGCt > 1:1683841/1‑93 (MQ=255)
tCATCGATGTTAGAAACCAGTTTCTGGAAGTGCGGTACCGGCTCCAGCGTTTCTTCATTACGGTACATACCGACAACGCTGATGCGCGCGCTc > 2:5318220/1‑93 (MQ=255)
tCATCGATGTTAGAAACCAGTTTCTGGAAGTGCGGTACCGGCTCCAGCGTTTCTTCATTACGGTACATACCGACAACGCTGATCGGCGCGCTc > 1:849682/1‑93 (MQ=255)
cATCGATGTTAGAAACCAGTTTCTGGAAGTGCGGTACCGGCTCCAGCGTTTCTTCATTACGGTACATACCGACAACGCTGATGCGCGCGCTCg > 2:5052381/1‑93 (MQ=255)
aTCGATGTTAGAAACCAGTTTCTGGAAGTGCGGTACCGGCTCCAGCGTTTCTTCATTACGGTACATACCGACAACGCTGATGCGCGCGCTCgg < 2:3368909/93‑1 (MQ=255)
aTCGATGTTAGAAACCAGTTTCTGGAAGTACGGTACCGGCTCCAGCGTTTCTTCATTACGGTACATACCGACAACGCTGATGCGCGCGCTCgg > 2:4083302/1‑93 (MQ=255)
gATGTTAGAAACCAGTTTCTGGAAGTGCGGTACCGGCTCCAGCGTTTCTTCATTACGGTACATACCGACAACGCTGATGCGCGCGCTCGGAAc > 1:4984566/1‑93 (MQ=255)
aTGTTAGAAACCAGTTTCTGGAAGTGCGGTACCGGCTCCAGCGTTTCTTCATTACGGTACATACCGACAACGCTGATGCGCGCGCTCGGAACg > 2:5672725/1‑93 (MQ=255)
tGTTAGAAACCAGTTTCTGGAAGTGCGGTACCGGCTCCAGCGTTTCTTCATTACGGTACATACCGACAACGCTGATGCGCGCGCTCGGAACGt > 2:223180/1‑93 (MQ=255)
gTTAGAAACCAGTTTCTGGAAGTGCGGTACCGGCTCCAGCGTTTCTTCATTACGGTACATACCGACAACGCTGATGCGCGCGCTCGGAACGtt > 2:450439/1‑93 (MQ=255)
tAGAAACCAGTTTCTGGAAGTGCGGTACCGGCTCCAGCGTTTCTTCATTACGGTACATACCGACAACGCTGATGCGCGCGCTCGGAACGtttt < 2:4533573/93‑1 (MQ=255)
aCCAGTTTCTGGAAGTGCGGTACCGGCTCCAGCGTTTCTTCATTACGGTACATACCGACAACGCTGATGCGCGCGCTCGGAACGTTTTCCAGc > 2:2681834/1‑93 (MQ=255)
aCCAGTTTCTGGAAGTGCGGTACCGGCTCCAGCGTTTCTTCATTACGGTACATACCGACAACGCTGATGCGCGCGCTCGGAACGTTTTCCAGc < 1:2694614/93‑1 (MQ=255)
ccAGTTTCTGGAAGTGCGGTACCGGCTCCAGCGTTTCTTCATTACGGTACATACCGACAACGCTGATGCGCGCGCTCGGAACGTTTTCCAGca < 1:597445/93‑1 (MQ=255)
cAGTTTCTGGAAGTGCGGTACCGGCTCCAGCGTTTCTTCATTACGGTACATACCGACAACGCTGATGCGCGCGCTCGGAACGTTTTCCAGcac < 1:5407681/93‑1 (MQ=255)
cAGTTTCTGGAAGTACGGTACCGGCTCCAGCGTTTCTTCATTACGGTACATACCGACAACGCTGATGCGCGCGCTCGGAACGTTTTCCAGcac > 1:5485712/1‑93 (MQ=255)
aGTTTCTGGAAGTGCGGTACCGGCTCCAGCGTTTCTTCATTACGGTACATACCGACAACGCTGATGCGCGCGCTCGGAACGTTTTCCAGcaca > 2:2759249/1‑93 (MQ=255)
gTTTCTGGAAGTGCGGTACCGGCTCCAGCGTTTCTTCATTACGGTACATACCGACAACGCTGATGCGCGCGCTCGGAACGTTTTCCAGCacac < 2:4112764/93‑1 (MQ=255)
gTTTCTGGAAGTACGGTACCGGCTCCAGCGTTTCTTCATTACGGTACATACCGACAACGCTGATGCGCGCGCTCGGAACGTTTTCCAGCacac > 2:5697501/1‑93 (MQ=255)
tttCTGGAAGTACGGTACCGGCTCCAGCGTTTCTTCATTACGGTACATACCGACAACGCTGATGCGCGCGCTCGGAACGTTTTCCAGCACAcc < 2:5947411/93‑1 (MQ=255)
ttCTGGAAGTGCGGTACCGGCTCCAGCGTTTCTTCATTACGGTACATACCGACAACGCTGATGCGCGCGCTCGGAACGTTTTCCAGCACACCg < 2:3588718/93‑1 (MQ=255)
tCTGGAAGTGCGGTACCGGCTCCAGCGTTTCTTCATTACGGTACATACCGACAACGCTGATGCGCGCGCTCGGAACGTTTTCCAGCACACCGt > 1:2638341/1‑93 (MQ=255)
cTGGAAGTGCGGTACCGGCTCCAGCGTTTCTTCATTACGGTACATACCGACAACGCTGATGCGCGCGCTCGGAACGTTTTCCAGCACACCGTc > 1:6156017/1‑93 (MQ=255)
cTGGAAGTGCGGTACCGGCTCCAGCGTTTCTTCATTACGGTACATACCGACAACGCTGATGCGCGCGCTCGGAACGTTTTCCAGCACACCGTc < 1:5291290/93‑1 (MQ=255)
ggAAGTGCGGTACCGGCTCCAGCGTTTCTTCATTACGGTACATACCGACAACGCTGATGCGCGCGCTCGGAACGTTTTCCAGCACACCGTCca > 2:4887697/1‑93 (MQ=255)
aaGTGCGGTACCGGCTCCAGCGTTTCTTCATTACGGTACATACCGACAACGCTGATGCGCGCGCTCGGAACGTTTTCCAGCACACCGTCcatc < 2:2814889/93‑1 (MQ=255)
aaGTGCGGTACCGGCTCCAGCGTTTCTTCATTACGGTACATACCGACAACGCTGATGCGCGCGCTCGGAACGGTTTGCAGCAGACCGTAcata > 1:3979494/1‑92 (MQ=255)
aGTGCGGTACCGGCTCCAGCGTTTCTTCATTACGGTACATACCGACAACGCTGATGCGCGCGCTCGGAACGTTTTCCAGCACACCGTCcatca > 1:6378619/1‑93 (MQ=255)
tACGGTACCGGCTCCAGCGTTTCTTCATTACGGTACATACCGACAACGCTGATGCGCGCGCTCGGAACGTTTTCCAGCACACCGTCCATCATa < 2:2128140/93‑1 (MQ=255)
|
ATGGTCGCGATAACGGAACCACCGGTTGCCAGCATTGGGTCAACGATCAGCGCCATACGCTCATCGATGTTAGAAACCAGTTTCTGGAAGTACGGTACCGGCTCCAGCGTTTCTTCATTACGGTACATACCGACAACGCTGATGCGCGCGCTCGGAACGTTTTCCAGCACACCGTCCATCATA > NC_000913/2618465‑2618647
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
GATGGTCGCGATAACGGAACCACCGGTTGCCAGCATTGGGTCAACGATCAGCGCCATACGCTCATCGATGTTAGAAACCAGTTTCTGGAAGTACGGTACCGGCTCCAGCGTTTCTTCATTACGGTACATACCGACAACGCTGATGCGCGCGCTCGGAACGTTTTCCAGCACACCGTCCATCATAC > NC_000913/2618464‑2618648
|
GATGGTCGCGATAACGGAACCACCGGTTGCCAGCATTGGGTCAACGATCAGCGCCATACGCTCATCGATGTTAGAAACCAGTTTCTGGAAGTGC > SRR4302547.2748063/1‑94 (MQ=60)
ATGGTCGCGATAACGGAACCACCGGTTGCCAGCATTGGGTCAACGATCAGCGCCATACGCTCATCGATGTTAGAAACCAGTTTCTGGAAGTGCG < SRR4302547.1309892/94‑1 (MQ=60)
ATGGTCGCGATAACGGAACCACCGGTTGCCAGCATTGGGTCAACGATCAGCGCCATACGCTCATCGATGTTAGAAACCAGTTTCTGGAAGTGCG < SRR4302547.3985331/94‑1 (MQ=60)
ATGGTCGCGATAACGGAACCACCGGTTGCCAGCATTGGGTCAACGATCAGCGCCATACGCTCATCGATGTTAGAAACCAGTTTCTGGAAGTGCG > SRR4302547.3135583/1‑94 (MQ=60)
TGGTCGCGATAACGGAACCACCGGTTGCCAGCATTGGGTCAACGATCAGCGCCATACGCTCATCGATGTTAGAAACCAGTTTCTGGAAGTGCGG < SRR4302547.4193515/94‑1 (MQ=60)
TGGTCGCGATAACGGAACCACCGGTTGCCAGCATTGGGTCAACGATCAGCGCCATACGCTCATCGATGTTAGAAACCAGTTTCTGGAAGTGCGG < SRR4302547.3603574/94‑1 (MQ=60)
GGTCGCGATAACGGAACCACCGGTTGCCAGCATTGGGTCAACGATCAGCGCCATACGCTCATCGATGTTAGAAACCAGTTTCTGGAAGTACGGA > SRR4302547.3039413/1‑94 (MQ=60)
GTCGCGATAACGGAACCACCGGTTGCCAGCATTGGGTCAACGATCAGCGCCATACGCTCATCGATGTTAGAAACCAGTTTCTGGAAGTGCGGTA > SRR4302547.4260703/1‑94 (MQ=60)
GTCGCGATAACGGAACCACCGGTTGCCAGCATTGGGTCAACGATCAGCGCCATACGCTCATCGATGTTAGAAACCAGTTTCTGGAAGTGCGGTA < SRR4302547.828419/94‑1 (MQ=60)
GTCGCGATAACGGAACCACCGATTGCCAGCATTGGGTCAACGATCAGCGCCATACGCTCATCGATGTTAGAAACCAGTTTCTGGAAGTGCGGTA < SRR4302547.1737720/94‑1 (MQ=60)
TCGCGATAACGGAACCACCGGTTGCCAGCATTGGGTCAACGATCAGCGCCATACGCTCATCGATGTTAGAAACCAGTTTCTGGAAGTGCGGTAC < SRR4302547.5061632/94‑1 (MQ=60)
GCGATAACGGAACCACCGGTTGCCAGCATTGGGTCAACGATCAGCGCCATACGCTCATCGATGTTAGAAACCAGTTTCTGGAAGTGCGGTACCG > SRR4302547.3993081/1‑94 (MQ=60)
CGATAACGGAACCACCGGTTGCCAGCATTGGGTCAACGATCAGCGCCATACGCTCATCGATGTTAGAAACCAGTTTCTGGAAGTGCGGTACCGG < SRR4302547.4049622/94‑1 (MQ=60)
ATAACGGAACCACCGGTTGCCAGCATTGGGTCAACGATCAGCGCCATACGCTCATCGATGTTAGAAACCAGTTTCTGGAAGTGCGGTACCGGCT < SRR4302547.5556779/94‑1 (MQ=60)
ATAACGGAACCACCGGTTGCCAGCATTGGGTCAACGATCAGCGCCATACGCTCATCGATGTTAGAAACCAGTTTCTGGAAGTGCGGTACCGGCT < SRR4302547.55932/94‑1 (MQ=60)
AACGGAACCACCGGTTGCCAGCATTGGGTCAACGATCAGCGCCATACGCTCATCGATGTTAGAAACCAGTTTCTGGAAGTGCGGTACCGGCTCC > SRR4302547.2617122/1‑94 (MQ=60)
AACGGAACCACCGGTTGCCAGCATTGGGTCAACGATCAGCGCCATACGCTCATCGATGTTAGAAACCAGTTTCTGGAAGTGCGGTACCGGCTCC > SRR4302547.1345260/1‑94 (MQ=60)
AACGGAACCACCGGTTGCCAGCATTGGGTCAACGATCAGCGCCATACGCTCATCGATGTTAGAAACCAGTTTCTGGAAGTGCGGTACCGGCTCC < SRR4302547.5320357/94‑1 (MQ=60)
AACGGAACCACCGGTTGCCAGCATTGGGTCAACGATCAGCGCCATACGCTCATCGATGTTAGAAACCAGTTTCTGGAAGTGCGGTACCGGCTCC > SRR4302547.5515018/1‑94 (MQ=60)
CGGAACCACCGGTTGCCAGCATTGGGTCAACGATCAGCGCCATACGCTCATCGATGTTAGAAACCAGTTTCTGGAAGTGCGGTACCGGCTCCAG < SRR4302547.3792826/94‑1 (MQ=60)
GGAACCACCGGTTGCCAGCATTGGGTCAACGATCAGCGCCATACGCTCATCGATGTTAGAAACCAGTTTCTGGAAGTGCGGTACCGGCTCCAGC < SRR4302547.6202182/94‑1 (MQ=60)
ACCACCGGTTGCCAGCATTGGGTCAACGATCAGCGCCATACGCTCATCGATGTTAGAAACCAGTTTCTGGAAGTGCGGTACCGGCTCCAGCGTT < SRR4302547.6263873/94‑1 (MQ=60)
CCACCGGTTGCCAGCATTGGGTCAACGATCAGCGCCATACGCTCATCGATGTTAGAAACCAGTTTCTGGAAGTGCGGTACCGGCTCCAGCGTTT > SRR4302547.6212217/1‑94 (MQ=60)
CCACCGGTTGCCAGCATTGGGTCAACGATCAGCGCCATACGCTCATCGATGTTAGAAACCAGTTTCTGGAAGTGCGGTACCGGCTCCAGCGTTT > SRR4302547.4847555/1‑94 (MQ=60)
CACCGGTTGCCAGCATTAGGTCAACGATCAGCGCCATACGCTCATCGATGTTAGAAACCAGTTTCTGGAAGTACGGTACCGGCTCCAGCGTTTC < SRR4302547.5860958/94‑1 (MQ=60)
ACCGGTTGCCAGCATTGGGTCAACGATCAGCGCCATACGCTCATCGATGTTAGAAACCAGTTTCTGGAAGTGCGGTACCGGCTCCAGCGTTTCT > SRR4302547.1059972/1‑94 (MQ=60)
CGGTTGCCAGCATTGGGTCAACGATCAGCGCCATACGCTCATCGATGTTAGAAACCAGTTTCTGGAAGTGCGGTACCGGCTCCAGCGTTTCTTC > SRR4302547.2810727/1‑94 (MQ=60)
CGGTTGCCAGCATTGGGTCAACGATCAGCGCCATACGCTCATCGATGTTAGAAACCAGTTTCTGGAAGTACGGTACCGGCTCCAGCGTTTCTTC > SRR4302547.3038535/1‑94 (MQ=60)
CGGTTGCCAGCATTGGGTCAACGATCAGCGCCATACGATCATCGATGTTAGAAACCAGTTTCTGGAAGTGCGGTACCGGCTCCAGCGTTTCTTC < SRR4302547.4071209/94‑1 (MQ=60)
GGTTGCCAGCATTGGGTCAACGATCAGCGCCATACGCTCATCGATGTTAGAAACCAGTTTCTGGAAGTGCGGTACCGGCTCCAGCGTTTCTTCA > SRR4302547.1651517/1‑94 (MQ=60)
GTTGCCAGCATTGGGTCAACGATCAGCGCCATACGCTCATCGATGTTAGAAACCAGTTTCTGGAAGTGCGGTACCGGCTCCAGCGTTTCTTCAT < SRR4302547.4118298/94‑1 (MQ=60)
TTGCCAGCATTGGGTCAACGATCAGCGCCATACGCTCATCGATGTTAGAAACCAGTTTCTGGAAGTGCGGTACCGGCTCCAGCGTTTCTTCATT < SRR4302547.3633778/94‑1 (MQ=60)
TGCCAGCATTGGGTCAACGATCAGCGCCATACGCTCATCGATGTTAGAAACCAGTTTCTGGAAGTGCGGTACCGGCTCCAGCGTTTCTTCATTA < SRR4302547.839781/94‑1 (MQ=60)
GCCAGCATTGGGTCAACGATCAGCGCCATACGCTCATCGATGTTAGAAACCAGTTTCTGGAAGTGCGGTACCGGCTCCAGCGTTTCTTCATTAC > SRR4302547.4778088/1‑94 (MQ=60)
CCAGCATTGGGTCAACGATCAGCGCCATACGCTCATCGATGTTAGAAACCAGTTTCTGGAAGTGCGGTACCGGCTCCAGCGTTTCTTCATTACG > SRR4302547.2554111/1‑94 (MQ=60)
CAGCATTGGGTCAACGATCAGCGCCATACGCTCATCGATGTTAGAAACCAGTTTCTGGAAGTGCGGTACCGGCTCCAGCGTTTCTTCATTACGG < SRR4302547.4135714/94‑1 (MQ=60)
AGCATTGGGTCAACGATCAGCGCCATACGCTCATCGATGTTAGAAACCAGTTTCTGGAAGTGCGGTACCGGCTCCAGCGTTTCTTCATTACGGT < SRR4302547.3579586/94‑1 (MQ=60)
AGCATTGGGTCAACGATCAGCGCCATACGCTCATCGATGTTAGAAACCAGTTTCTGGAAGTGCGGTACCGGCTCCAGCGTTTCTTCATTACGGT > SRR4302547.473246/1‑94 (MQ=60)
AGCATTGGGTCAACGATCAGCGCCATACGCTCATCGATGTTAGAAACCAGTTTCTGGAAGTGCGGTACCGGCTCCAGCGTTTCTTCATTACGGT > SRR4302547.1396176/1‑94 (MQ=60)
CATTGGGTCAACGATCAGCGCCATACGCTCATCGATGTTAGAAACCAGTTTCTGGAAGTGCGGTACCGGCTCCAGCGTTTCTTCATTACGGTAC < SRR4302547.5606358/94‑1 (MQ=60)
CATTGGGTCAACGATCAGCGCCATACGCTCATCGATGTTAGAAACCAGTTTCTGGAAGTGCGGTACCGGCTCCAGCGTTTCTTCATTACGGTAC < SRR4302547.6367119/94‑1 (MQ=60)
ATTGGGTCAACGATCAGCGCCATACGCTCATCGATGTTAGAAACCAGTTTCTGGAAGTACGGTACCGGCTCCAGCGTTTCTTCATTACGGTACA > SRR4302547.4883792/1‑94 (MQ=60)
TGGGTCAACGATCAGCGCCATACGCTCATCGATGTTAGAAACCAGTTTCTGGAAGTGCGGTACCGGCTCCAGCGTTTCTTCATTACGGTACATA > SRR4302547.4357040/1‑94 (MQ=60)
GTCAACGATCAGCGCCATACGCTCATCGATGTTAGAAACCAGTTTCTGGAAGTGCGGTACCGGCTCCAGCGTTTCTTCATTACGGTACATACCG < SRR4302547.1600210/94‑1 (MQ=60)
TCAACGATCAGCGCCATACGCTCATCGATGTTAGAAACCAGTTTCTGGAAGTGCGGTACCGGCTCCAGCGTTTCTTCATTACGGTACATACCGA > SRR4302547.3117702/1‑94 (MQ=60)
CAACGATCAGCGCCATACGCTCATCGATGTTAGAAACCAGTTTCTGGAAGTGCGGTACCGGCTCCAGCGTTTCTTCATTACGGTACATACCGAC < SRR4302547.6329520/94‑1 (MQ=60)
AACGATCAGCGCCATACGCTCATCGATGTTAGAAACCAGTTTCTGGAAGTGCGGTACCGGCTCCAGCGTTTCTTCATTACGGTACATACCGACA > SRR4302547.6008033/1‑94 (MQ=60)
GATCAGCGCCATACGCTCATCGATGTTAGAAACCAGTTTCTGGAAGTGCGGTACCGGCTCCAGCGTTTCTTCATTACGGTACATACCGACAACG > SRR4302547.6592682/1‑94 (MQ=60)
ATCAGCGCCATACGCTCATCGATGTTAGAAACCAGTTTCTGGAAGTGCGGTACCGGCTCCAGCGTTTCTTCATTACGGTACATACCGACAACGC > SRR4302547.6645392/1‑94 (MQ=60)
TCAGCGCCATACGCTCATCGATGTTAGAAACCAGTTTCTGGAAGTGCGGTACCGGCTCCAGCGTTTCTTCATTACGGTACATACCGACAACGCT < SRR4302547.6298886/94‑1 (MQ=60)
TCAGCGCCATACGCTCATCGATGTTAGAAACCAGTTTCTGGAAGTGCGGTACCGGCTCCAGCGTTTCTTCATTACGGTACATACCGACAACGCT < SRR4302547.4149160/94‑1 (MQ=60)
TCAGCGCCATACGCTCATCGATGTTAGAAACCAGTTTCTGGAAGTGCGGTACCGGCTCCAGCGTTTCTTCATTACGGTACATACCGACAACGCT < SRR4302547.1829292/94‑1 (MQ=60)
GCGCCATACGCTCATCGATGTTAGAAACCAGTTTCTGGAAGTGCGGTACCGGCTCCAGCGTTTCTTCATTACGGTACATACCGACAACGCTGAT < SRR4302547.5354273/94‑1 (MQ=60)
CGCCATACGCTCATCGATGTTAGAAACCAGTTTCTGGAAGTACGGTACCGGCTCCAGCGTTTCTTCATTACGGTACATACCGACAACGCTGATG > SRR4302547.3901216/1‑94 (MQ=60)
GCCATACGCTCATCGATGTTAGAAACCAGTTTCTGGAAGTACGGTACCGGCTCCAGCGTTTCTTCATTACGGTACATACCGACAACGCTGATGC > SRR4302547.4148345/1‑94 (MQ=60)
CCATACGCTCATCGATGTTAGAAACCAGTTTCTGGAAGTGCGGTACCGGCTCCAGCGTTTCTTCATTACGGTACATACCGACAACGCTGATGCG > SRR4302547.6057641/1‑94 (MQ=60)
CCATACGCTCATCGATGTTAGAAACCAGTTTCTGGAAGTGCGGTACCGGCTCCAGCGTTTCTTCATTACGGTACATACCGACAACGCTGATGCG > SRR4302547.6170489/1‑94 (MQ=60)
CCATACGCTCATCGATGTTAGAAACCAGTTTCTGGAAGTGCGGTACCGGCTCCAGCGTTTCTTCATTACGGTACATACCGACAACGCTGATGCG < SRR4302547.3899241/94‑1 (MQ=60)
CATACGCTCATCGATGTTAGAAACCAGTTTCTGGAAGTGCGGTACCGGCTCCAGCGTTTCTTCATTACGGTACATACCGACAACGCTGATGCGC > SRR4302547.4100567/1‑94 (MQ=60)
CATACGCTCATCGATGTTAGAAACCAGTTTCTGGAAGTACGGTACCGGCTCCAGCGTTTCTTCATTACGGTACATACCGACAACGCTGATGCGC > SRR4302547.1646330/1‑94 (MQ=60)
ATACGCTCATCGATGTTAGAAACCAGTTTCTGGAAGTGCGGTACCGGCTCCAGCGTTTCTTCATTACGGTACATACCGACAACGCTGATGCGCG < SRR4302547.1736922/94‑1 (MQ=60)
ATACGCTCATCGATGTTAGAAACCAGTTTCTGGAAGTGCGGTACCGGCTCCAGCGTTTCTTCATTACGGTACATACCGACAACGCTGATGCGCG < SRR4302547.5181905/94‑1 (MQ=60)
ACGCTCATCGATGTTAGAAACCAGTTTCTGGAAGTACGGTACCGGCTCCAGCGTTTCTTCATTACGGTACATACCGACAACGCTGATGCGCGCG > SRR4302547.2897531/1‑94 (MQ=60)
CGCTCATCGATGTTAGAAACCAGTTTCTGGAAGTGCGGTACCGGCTCCAGCGTTTCTTCATTACGGTACATACCGACAACGCTGATGCGCGCGC > SRR4302547.824324/1‑94 (MQ=60)
CGCTCATCGATGTTAGAAACCAGTTTCTGGAAGTGCGGTACCGGCTCCAGCGTTTCTTCATTACGGTACATACCGACAACGCTGATGCGCGCGC > SRR4302547.2854768/1‑94 (MQ=60)
GCTCATCGATGTTAGAAACCAGTATCTGGAAGTGCGGTACCGGCTCCAGCGTTTCTTCATTACGGTACATACCGACAACGCTGATGCGCGCGCT > SRR4302547.1716990/1‑94 (MQ=60)
CTCATCGATGTTAGAAACCAGTTTCTGGAAGTGCGGTACCGGCTCCAGCGTTTCTTCATTACGGTACATACCGACAACGCTGATGCGCGCGCTC > SRR4302547.3405705/1‑94 (MQ=60)
CTCATCGATGTTAGAAACCAGTTTCTGGAAGTGCGGTACCGGCTCCAGCGTTTCTTCATTACGGTACATACCGACAACGCTGATGCGCGCGCTC < SRR4302547.4633127/94‑1 (MQ=60)
CTCATCGATGTTAGAAACCAGTTTCTGGAAGTGCGGTACCGGCTCCAGCGTTTCTTCATTACGGTACATACCGACAACGCTGATGCGCGCGCTC < SRR4302547.2138842/94‑1 (MQ=60)
CTCATCGATGTTAGAAACCAGTTTCTGGAAGTGCGGTACCGGCTCCAGCGTTTCTTCATTACGGTACATACCGACAACGCTGATCGGCGCGCTC > SRR4302547.865911/1‑94 (MQ=60)
CTCATCGATGTTAGAAACCAGTTTCTGGAAGTACGGTACCGGCTCCAGCGTTTCTTCATTACGGTACATACCGACAACGCTGATGCGCGCGCTC < SRR4302547.159188/94‑1 (MQ=60)
ATCGATGTTAGAAACCAGTTTCTGGAAGTGCGGTACCGGCTCCAGCGTTTCTTCATTACGGTACATACCGACAACGCTGATGCGCGCGCTCGGA > SRR4302547.1693484/1‑94 (MQ=60)
ATCGATGTTAGAAACCAGTTTCTGGAAGTGCGGTACCGGCTCCAGCGTTTCTTCATTACGGTACATACCGACAACGCTGATGCGCGCGCTCGGA > SRR4302547.2687517/1‑94 (MQ=60)
ATCGATGTTAGAAACCAGTTTCTGGAAGTACGGTACCGGCTCCAGCGTTTCTACATTACGGTACATACCGACAACGCTGATGCGCGCGCTCGGA < SRR4302547.2602877/94‑1 (MQ=60)
CGATGTTAGAAACCAGTTTCTGGAAGTGCGGTACCGGCTCCAGCGTTTCTTCATTACGGTACATACCGACAACGCTGATGCGCGCGCTCGGAAC > SRR4302547.5087638/1‑94 (MQ=60)
GATGTTAGAAACCAGTTTCTGGAAGTACGGTACCCGCTCCCGCGTTTCTTCATTACGGTACATACCGACAACGCTGATGCGCGCGCTCGGAACG > SRR4302547.1775444/1‑94 (MQ=60)
ATGTTAGAAACCAGTTTCTGGAAGTGCGGTACCGGCTCCAGCGTTTCTTCATTACGGTACATACCGACAACGCTGATGCGCGCGCTCGGAACGT > SRR4302547.3291230/1‑94 (MQ=60)
TGTTAGAAACCAGTTTCTGGAAGTGCGGTACCGGCTCCAGCGTTTCTTCATTACGGTACATACCGACAACGCTGATGCGCGCGCTCGGAACGTT > SRR4302547.4840348/1‑94 (MQ=60)
TGTTAGAAACCAGTTTCTGGAAGTGCGGTACCGGCTCCAGCGTTTCTTCATTACGGTACATACCGACAACGCTGATGCGCGCGCTCGGAACGTT > SRR4302547.2762219/1‑94 (MQ=60)
GTTAGAAACCAGTTTCTGGAAGTGCGGTACCGGCTCCAGCGTTTCTTCATTACGGTACATACCGACAACGCTGATGCGCGCGCTCGGAACGTTT < SRR4302547.5783921/94‑1 (MQ=60)
GTTAGAAACCAGTTTCTGGAAGTGCGGTACCGGCTCCAGCGTTTCTTCATTACGGTACATACCGACAACGCTGATGCGCGCGCTCGGAACGTTT < SRR4302547.3674944/94‑1 (MQ=60)
AGAAACCAGTTTCTGGAAGTGCGGTACCGGCTCCAGCGTTTCTTCATTACGGTACATACCGACAACGCTGATGCGCGCGCTCGGAACGTTTTCC > SRR4302547.65138/1‑94 (MQ=60)
AGAAACCAGTTTCTGGAAGTGCGGTACCGGCTCCAGCGTTTCTTCATTACGGTACATACCGACAACGCTGATGCGCGCGCTCGGAACGTTTTCC > SRR4302547.3857587/1‑94 (MQ=60)
ACCAGTTTCTGGAAGTGCGGTACCGGCTCCAGCGTTTCTTCATTACGGTACATACCGACAACGCTGATGCGCGCGCTCGGAACGTTTTCCAGCA < SRR4302547.2695714/94‑1 (MQ=60)
ACCAGTTTCTGGAAGTGCGGTACCGGCTCCAGCGTTTCTTCATTACGGTACATACCGACAACGCTGATGCGCGCGCTCGGAACGTTTTCCAGCA < SRR4302547.2748715/94‑1 (MQ=60)
CCAGTTTCTGGAAGTGCGGTACCGGCTCCAGCGTTTCTTCATTACGGTACATACCGACAACGCTGATGCGCGCGCTCGGAACGTTTTCCAGCAC < SRR4302547.608437/94‑1 (MQ=60)
CCAGTTTCTGGAAGTACGGTACCGGCTCCAGCGTTTCTTCATTACGGTACATACCGACAACGCTGATGCGCGCGCTCGGAACGTTTTCCAGCAC > SRR4302547.5598989/1‑94 (MQ=60)
CAGTTTCTGGAAGTGCGGTACCGGCTCCAGCGTTTCTTCATTACGGTACATACCGACAACGCTGATGCGCGCGCTCGGAACGTTTTCCAGCACA > SRR4302547.99071/1‑94 (MQ=60)
CAGTTTCTGGAAGTGCGGTACCGGCTCCAGCGTTTCTTCATTACGGTACATACCGACAACGCTGATGCGCGCGCTCGGAACGTTTTCCAGCACA < SRR4302547.5519485/94‑1 (MQ=60)
CAGTTTCTGGAAGTGCGGTACCGGCTCCAGCGTTTCTTCATTACGGTACATACCGACAACGCTGATGCGCGCGCTCGGAACGTTTTCCAGCACA > SRR4302547.4776897/1‑94 (MQ=60)
AGTTTCTGGAAGTGCGGTACCGGCTCCAGCGTTTCTTCATTACGGTACATACCGACAACGCTGATGCGCGCGCTCGGAACGTTTTCCAGCACAC < SRR4302547.4696010/94‑1 (MQ=60)
TTCTGGAAGTGCGGTACCGGCTCCAGCGTTTCTTCATTACGGTACATACCGACAACGCTGATGCGCGCGCTCGGAACGTTTTCCAGCACACCGT > SRR4302547.2691457/1‑94 (MQ=60)
TCTGGAAGTGCGGTACCGGCTCCAGCGTTTCTTCATTACGGTACATACCGACAACGCTGATGCGCGCGCTCGGAACGTTTTCCAGCACACCGTC > SRR4302547.6283778/1‑94 (MQ=60)
CTGGAAGTGCGGTACCGGCTCCAGCGTTTCTTCATTACGGTACATACCGACAACGCTGATGCGCGCGCTCGGAACGTTTTCCAGCACACCGTCC < SRR4302547.5400444/94‑1 (MQ=60)
TGGAAGTGCGGTACCGGCTCCAGCGTTTCTTCATTACGGTACATACCGACAACGCTGATGCGCGCGCTCGGAACGTTTTCCAGCACACCGTCCA < SRR4302547.6151404/94‑1 (MQ=60)
GGAAGTGCGGTACCGGCTCCAGCGTTTCTTCATTACGGTACATACCGACAACGCTGATGCGCGCGCTCGGAACGTTTTCCAGCACACCGTCCAT > SRR4302547.5963578/1‑94 (MQ=60)
GAAGTGCGGTACCGGCTCCAGCGTTTCTTCATTACGGTACATACCGACAACGCTGATGCGCGCGCTCGGAACGGTTTGCAGCAGACCGTacata > SRR4302547.4060411/1‑89 (MQ=60)
AAGTGCGGTACCGGCTCCAGCGTTTCTTCATTACGGTACATACCGACAACGCTGATGCGCGCGCTCGGAACGTTTTCCAGCACACCGTCCATCA > SRR4302547.6511742/1‑94 (MQ=60)
AGTGCGGTACCGGCTCCAGCGTTTCTTCATTACGGTACATACCGACAACGCTGATGCGCGCGCTCGGAACGTTTTCCAGCACACCGTCCATCAT > SRR4302547.6663313/1‑94 (MQ=60)
TGCGGTACCGGCTCCAGCGTTTCTTCATTACGGTACATACCGACAACGCTGATGCGCGCGCTCGGAACGTTTTCCAGCACACCGTCCATCATAC < SRR4302547.4591262/94‑1 (MQ=60)
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GATGGTCGCGATAACGGAACCACCGGTTGCCAGCATTGGGTCAACGATCAGCGCCATACGCTCATCGATGTTAGAAACCAGTTTCTGGAAGTACGGTACCGGCTCCAGCGTTTCTTCATTACGGTACATACCGACAACGCTGATGCGCGCGCTCGGAACGTTTTCCAGCACACCGTCCATCATAC > NC_000913/2618464‑2618648
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
