Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
593 |
264.2 |
13311096 |
97.8% |
13018251 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
2,782,327 |
T→C |
V41V (GTA→GTG) |
b2649 ← |
hypothetical protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 2,782,327 | 0 | T | C | 86.2%
| 422.3
/ 56.7
| 167 | V41V (GTA→GTG) | b2649 | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base T (14/9); new base C (64/80); total (78/89) |
| Fisher's exact test for biased strand distribution p-value = 1.78e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 4.56e-02 |
Only 100 of 179 total aligned reads displayed.
TATCTTGAGGCTGAGCTCTTGGTAAAAACTTATAGCAACACTCATAAAAATTAAACAGAAGCTCTGAAGACCTTGTATTTTTATCAAATAATACCCCCTTGAACTCATTCACAAACGCATCTTTTTTTTCTTGAATATCTATGGGGTGTTCCTTTGACTCTGACAAAGATGAAATCTCATC > NC_000913/2782236‑2782416
|
tATCTTGAGGCTGAGCTCTTGGTAAAAACTTATAGCAACACTCATAAAAATTAAACAGAAGCTCTGAAGACCTTGTATTTTTATCAAataata > 1:6523014/1‑93 (MQ=255)
aTCTTGAGGCTGAGCTCTTGGTAAAAACTTATAGCAACACTCATAAAAATTAAACAGAAGCTCTGAAGACCTTGTATTTTTATCAAATAacac < 1:3176218/93‑1 (MQ=255)
aTCTTGAGGCTGAGCTCTTGGTAAAAACTTATAGCAACACTCATAAAAATTAAACAGAAGCTCTGAAGACCTTGTATTTTTATCAAATAacac < 2:5851311/93‑1 (MQ=255)
cTTGAGGCTGAGCTCTTGGTAAAAACTTATAGCAACACTCATAAAAATTAAACAGAAGCTCTGAAGACCTTGTATTTTTATCAAATAACAccc < 2:3340232/93‑1 (MQ=255)
ttGAGGCTGAGCTCTTGGTAAAAACTTATAGCAACACTCATAAAAATTAAACAGAAGCTCTGAAGACCTTGTATTTTTATCAAATAATAcccc > 2:6376774/1‑93 (MQ=255)
ttGAGGCTGAGCTCTTGGTAAAAACTTATAGCAACACTCATAAAAATTAAACAGAAGCTCTGAAGACCTTGTATTTTTATCAAATAACAcccc > 2:5436552/1‑93 (MQ=255)
ttGAGGCTGAGCTCTTGGTAAAAACTTATAGCAACACTCATAAAAATTAAACAGAAGCTCTGAAGACCTTGTATTTTTATCAAATAACAcccc < 1:5923640/93‑1 (MQ=255)
ttGAGGCTGAGCTCTTGGTAAAAACTTATAGCAACACTCATAAAAATTAAACAGAAGCTCTGAAGACCTTGTATTTTTATCAAATAACAcccc < 2:4054308/93‑1 (MQ=255)
gAGGCTGAGCTCTTGGTAAAAACTTATAGCAACACTCATAAAAATTAAACAGAAGCTCTGAAGACCTTGTATTTTTATCAAATAATACCCCCt < 2:5601464/93‑1 (MQ=255)
aGGCTGAGCTCTTGGTAAAAACTTATAGCAACACTCATAAAAATTAAACAGAAGCTCTGAAGACCTTGTATTTTTATCAAATAACACCCCCtt < 2:4119211/93‑1 (MQ=255)
aGGCTGAGCTCTTGGTAAAAACTTATAGCAACACTCATAAAAATTAAACAGAAGCTCTGAAGACCTTGTATTTTTATCAAATAACACCCCCtt < 2:1550001/93‑1 (MQ=255)
aGGCTGAGCTCTTGGTAAAAACTTATAGCAACACTCATAAAAATTAAACAGAAGCTCTGAAGACCTTGTATTTTTATCAAATAACACCCCCtt > 1:3102886/1‑93 (MQ=255)
ggCTGAGCTCTTGGTAAAAACTTATAGCAACACTCATAAAAATTAAACAGAAGCTCTGAAGACCTTGTATTTTTATCAAATAATACCCCCTTg > 1:2814891/1‑93 (MQ=255)
ggCTGAGCTCTTGGTAAAAACTTATAGCAACACTCATAAAAATTAAACAGAAGCTCTGAAGACCTTGTATTTTTATCAAATAACACCCCCTTg > 1:5407213/1‑93 (MQ=255)
ggCTGAGCTCTTGGTAAAAACTTATAGCAACACTCATAAAAATTAAACAGAAGCTCTGAAGACCTTGTATTTTTATCAAATAACACCCCCTTg > 2:1411856/1‑93 (MQ=255)
gAGCTCTTGGTAAAAACTTATAGCAACACTCATAAAAATTAAACAGAAGCTCTGAAGACCTTGTATTTTTATCAAATAACACCCCCTTGAACt > 1:5050005/1‑93 (MQ=255)
gAGCTCTTGGTAAAAACTTATAGCAACACTCATAAAAATTAAACAGAAGCTCTGAAGACCTTGTATTTTTATCAAATAACACCCCCTTGAACt < 1:1245270/93‑1 (MQ=255)
gAGCTCTTGGTAAAAACTTATAGCAACACTCATAAAAATTAAACAGAAGCTCTGAAGACCTTGTATTTTTATCAAATAACACCCCCTTGAACt < 1:300813/93‑1 (MQ=255)
gCTCTTGGTAAAAACTTATAGCAACACTCATAAAAATTAAACAGAAGCTCTGAAGACCTTGTATTTTTATCAAATAACACCCCCTTGAACTCa < 2:3749236/93‑1 (MQ=255)
ctctTGGTAAAAACTTATAGCAACACTCATAAAAATTAAACAGAAGCTCTGAAGACCTTGTATTTTTATCAAATAATACCCCCTTGAACTCAt < 1:2447177/93‑1 (MQ=255)
ctctTGGTAAAAACTTATAGCAACACTCATAAAAATTAAACAGAAGCTCTGAAGACCTTGTATTTTTATCAAATAACACCCCCTTGAACTCAt < 1:4356082/93‑1 (MQ=255)
ctTGGTAAAAACTTATAGCAACACTCATAAAAATTAAACAGAAGCTCTGAAGACCTTGTATTTTTATCAAATAATACCCCCTTGAACTCATTc < 1:74863/93‑1 (MQ=255)
ttGGTAAAAACTTATAGCAACACTCATAAAAATTAAACAGAAGCTCTGAAGACCTTGTATTTTTATCAAATAACACCCCCTTGAACTCATTca > 1:1423246/1‑93 (MQ=255)
ttGGTAAAAACTTATAGCAACACTCATAAAAATTAAACAGAAGCTCTGAAGACCTTGTATTTTTATCAAATAACACCCCCTTGAACTCATTca > 2:6430167/1‑93 (MQ=255)
tGGTAAAAACTTATAGCAACACTCATAAAAATTAAACAGAAGCTCTGAAGACCTTGTATTTTTATCAAATAACACCCCCTTGAACTCATTcac < 1:5971831/93‑1 (MQ=255)
gTAAAAACTTATAGCAACACTCATAAAAATTAAACAGAAGCTCTGAAGACCTTGTATTTTTATCAAATAACACCCCCTTGAACTCATTCACaa > 1:5081366/1‑93 (MQ=255)
aaaaaCTTATAGCAACACTCATAAAAATTAAACAGAAGCTCTGAAGACCTTGTATTTTTATCAAATAACACCCCCTTGAACTCATTCACAAAc < 2:4160940/93‑1 (MQ=255)
aaaaaCTTATAGCAACACTCATAAAAATTAAACAGAAGCTCTGAAGACCTTGTATTTTTATCAAATAACACCCCCTTGAACTCATTCACAAAc < 1:4304047/93‑1 (MQ=255)
aaaaaCTTATAGCAACACTCATAAAAATTAAACAGAAGCTCTGAAGACCTTGTATTTTTATCAAATAACACCCCCTTGAACTCATTCACAAAc < 1:2904486/93‑1 (MQ=255)
aaaCTTATAGCAACACTCATAAAAATTAAACAGAAGCTCTGAAGACCTTGTATTTTTATCAAATAACACCCCCTTGAACTTATTCACAAACGc > 2:3885249/1‑93 (MQ=255)
aaCTTATAGCAACACTCATAAAAATTAAACAGAAGCTCTGAAGACCTTGTATTTTTATCAAATAACACCCCCTTGAACTCATTCACACACGCa > 1:2175422/1‑93 (MQ=255)
aaCTTATAGCAACACTCATAAAAATTAAACAGAAGCTCTGAAGACCTTGTATTTTTATCAAATAACACCCCCTTGAACTCATTCACAAACGCa < 2:5085670/93‑1 (MQ=255)
aaCTTATAGCAACACTCATAAAAATTAAACAGAAGCTCTGAAGACCTTGTATTTTTATCAAATAACACCCCCTTGAACTCATTCACAAACGCa > 1:1756658/1‑93 (MQ=255)
aaCTTATAGCAACACTCATAAAAATTAAACAGAAGCTCTGAAGACCTTGTATTTTTATCAAATAACACCCCCTTGAACTCATTCACAAACGCa < 2:5763170/93‑1 (MQ=255)
cTTATAGCAACACTCATAAAAATTAAACAGAAGCTCTGAAGACCTTGTATTTTTATCAAATAACACCCCCTTGAACTCATTCACAAACGCATc > 1:3782331/1‑93 (MQ=255)
cTTATAGCAACACTCATAAAAATTAAACAGAAGCTCTGAAGACCTTGTATTTTTATCAAATAACACCCCCTTGAACTCATTCACAAACGCATc > 1:4691500/1‑93 (MQ=255)
cTTATAGCAACACTCATAAAAATTAAACAGAAGCTCTGAAGACCTTGTATTTTTATCAAATAACACCCCCTTGAACTCATTCACAAACGCATc > 1:2644579/1‑93 (MQ=255)
ttATAGCAACACTCATAAAAATTAAACAGAAGCTCTGAAGACCTTGTATTTTTATCAAATAACACCCCCTTGAACTCATTCACAAACGCATCt < 1:3480857/93‑1 (MQ=255)
ctataGCAACACTCATAAAAATTAAACAGAAGCTCTGAAGACCTTGTATTTTTATCAAATAACACCCCCTTGAACTCATTCACAAACGCATCt < 2:1150711/92‑1 (MQ=255)
ataGCAACACTCATAAAAATTAAACAGAAGCTCTGAAGACCTTGTATTTTTATCAAATAACACCCCCTTGAACTCATTCACAAACGCATCttt < 2:4928763/93‑1 (MQ=255)
ataGCAACACTCATAAAAATTAAACAGAAGCTCTGAAGACCTTGTATTTTTATCAAATAACACCCCCTTGAACTCATTCACAAACGCATCttt < 1:1120205/93‑1 (MQ=255)
ataGCAACACTCATAAAAATTAAACAGAAGCTCTGAAGACCTTGTATTTTTATCAAATAACACCCCCTTGAACTCATTCACAAACGCATCttt > 1:1731676/1‑93 (MQ=255)
taGCAACACTCATAAAAATTAAACAGAAGCTCTGAAGACCTTGTATTTTTATCAAATAATACCCCCTTGAACTCATTCACAAACGCATCtttt > 1:6235313/1‑93 (MQ=255)
taGCAACACTCATAAAAATTAAACAGAAGCTCTGAAGACCTTGTATTTTTATCAAATAACACTCCCTTGAACTCATTCACAAACGCATCtttt > 2:1241405/1‑93 (MQ=255)
taGCAACACTCATAAAAATTAAACAGAAGCTCTGAAGACCTTGTATTTTTATCAAATAACACCCCCTTGAACTCATTCACAAACGCATCtttt < 2:5978766/93‑1 (MQ=255)
gCAACACTCATAAAAATTAAACAGAAGCTCTGAAGACCTTGTATTTTTATCAAATAACACCCCCTTGAACTCATTCACAAACGCATCtttttt < 2:2663570/93‑1 (MQ=255)
gCAACACTCATAAAAATTAAACAGAAGCTCTGAAGACCTTGTATTTTTATCAAATAACACCCCCTTGAACTCATTCACAAACGCATCtttttt > 1:5538750/1‑93 (MQ=255)
gCAACACTCATAAAAATTAAACAGAAGCTCTGAAGACCTTGTATTTTTATCAAATAACACCCCCTTGAACTCATTCACAAACGCATCtttttt < 1:701408/93‑1 (MQ=255)
acacTCATAAAAATTAAACAGAAGCTCTGAAGACCTTGTATTTTTATCAAATAACACCCCCTTGAACTCATTCACAAACGCATCTTTTTTTTc < 2:2851561/93‑1 (MQ=255)
acacTCATAAAAATTAAACAGAAGCTCTGAAGACCTTGTATTTTTATCAAATAACACCCCCTTGAACTCATTCACAAACGCATCTTTTTTTTc > 1:4202729/1‑93 (MQ=255)
cacTCATAAAAATTAAACAGAAGCTCTGAAGACCTTGTATTTTTATCAAATAACACCCCCTTGAACTCATTCACAAACGCATCTTTTTTTTCt < 2:1073964/93‑1 (MQ=255)
cacTCATAAAAATTAAACAGAAGCTCTGAAGACCTTGTATTTTTATCAAATAACACCCCCTTGAACTCATTCACAAACGCATCTTTTTTTTCt < 1:1378216/93‑1 (MQ=255)
acTCATAAAAATTAAACAGAAGCTCTGAAGACCTTGTATTTTTATCAAATAACACCCCCTTGAACTCATTCACAAACGCATCTTTTTTTTCtt < 1:3395708/93‑1 (MQ=255)
acTCATAAAAATTAAACAGAAGCTCTGAAGACCTTGTATTTTTATCAAATAACACCCCCTTGAACTCATTCACAAACGCATCTTTTTTTTCtt < 1:1471495/93‑1 (MQ=255)
cTCATAAAAATTAAACAGAAGCTCTGAAGACCTTGTATTTTTATCAAATAACACCCCCTTGAACTCATTCACAAACGCATCTTTTTTTTCTTg > 2:6575334/1‑93 (MQ=255)
tCATAAAAATTAAACAGAAGCTCTGAAGACCTTGTATTTTTATCAAATAACACCCCCTTGAACTCATTCACAAACGCATCTTTTTTTTCTTGa > 1:4247414/1‑93 (MQ=255)
tCATAAAAATTAAACAGAAGCTCTGAAGACCTTGTATTTTTATCAAATAACACCCCCTTGAACTCATTCACAAACGCATCTTTTTTTTCTTGa > 2:3645226/1‑93 (MQ=255)
cATAAAAATTAAACAGAAGCTCTGAAGACCTTGTATTTTTATCAAATAACACCCCCTTGAACTCATTCACAAACGCATCTTTTTTTTCTTGaa < 1:989078/93‑1 (MQ=255)
tAAAAATTAAACAGAAGCTCTGAAGACCTTGTATTTTTATCAAATAACACCCCCTTGAACTCATTCACAAACGCATCTTTTTTTTCTTGAata < 1:3638928/93‑1 (MQ=255)
aaaaaTTAAACAGAAGCTCTGAAGACCTTGTATTTTTATCAAATAATACCCCCTTGAACTCATTCACAAACGCATCTTTTTTTTCTTGAatat > 1:5034051/1‑93 (MQ=255)
aaaTTAAACAGAAGCTCTGAAGACCTTGTATTTTTATCAAATAACACCCCCTTGAACTCATTCACAAACGCATCTTTTTTTTCTTGAATATCt > 1:5371304/1‑93 (MQ=255)
aaTTAAACAGAAGCTCTGAAGACCTTGTATTTTTATCAAATAACACCCCCTTGAACTCATTCACAAACGCATCTTTTTTTTCTTGAATATCTa > 1:4606255/1‑93 (MQ=255)
aaTTAAACAGAAGCTCTGAAGACCTTGTATTTTTATCAAATAACACCCCCTTGAACTCATTCACAAACGCATCTTTTTTTTCTTGAATATCTa < 2:5335038/93‑1 (MQ=255)
ttAAACAGAAGCTCTGAAGACCTTGTATTTTTATCAAATAATACCCCCTTGAACTCATTCACAAACGCATCTTTTTTTTCTTGAATATCTATg > 1:3963563/1‑93 (MQ=255)
ttAAACAGAAGCTCTGAAGACCTTGTATTTTTATCAAATAACACCCCCTTGAACTCATTCACAAACGCATCTTTTTTTTCTTGAATATCTATg < 2:394172/93‑1 (MQ=255)
ttAAACAGAAGCTCTGAAGACCTTGTATTTTTATCAAATAACACCCCCTTGAACTCATTCACAAACGCATCTTTTTTTTCTTGAATATCTATg < 1:3870928/93‑1 (MQ=255)
aaCAGAAGCTCTGAAGACCTTGTATTTTTATCAAATAACACCCCCTTGAACTCATTCACAAACGCATCTTTTTTTTCTTGAATATCTATgggg > 1:6273854/1‑93 (MQ=255)
aCAGAAGCTCTGAAGACCTTGTATTTTTATCAAATAACACCCCCTTGAACTCATTCACAAACGCATCTTTTTTTTCTTGAATATCTATGGGgt < 1:5636273/93‑1 (MQ=255)
aGAAGCTCTGAAGACCTTGTATTTTTATCAAATAACACCCCCTTGAACTCATTCACAAACGCATCTTTTTTTTCTTGAATATCTATGGGgtgt > 2:745513/1‑93 (MQ=255)
gAAGCTCTGAAGACCTTGTATTTTTATCAAATAACACCCCCTTGAACTCATTCACAAACGCATCTTTTTTTTCTTGAATATCTATGGGGTGtt > 2:2131468/1‑93 (MQ=255)
gCTCTGAAGACCTTGTATTTTTATCAAATAACACCCCCTTGAACTCATTCACAAACGCATCTTTTTTTTCTTGAATATCTATGGGGTGTTCCt < 1:5581076/93‑1 (MQ=255)
ctctGAAGACCTTGTATTTTTATCAAATAACACCCCCTTGAACTCATTCACAAACGCATCTTTTTTTTCTTGAATATCTATGGGGTGTTCCtt < 2:5707040/93‑1 (MQ=255)
tGAAGACCTTGTATTTTTATCAAATAACACCCCCTTGAACTCATTCACAAACGCATCTTTTTTTTCTTGAATATCTATGGGGTGTTCCTTTGa < 2:3988712/93‑1 (MQ=255)
aaGACCTTGTATTTTTATCAAATAACACCCCCTTGAACTCATTCACAAACGCATCTTTTTTTTCTTGAATATCTATGGGGTGTTCCTTTGAct > 1:4760612/1‑93 (MQ=255)
aaGACCTTGTATTTTTATCAAATAACACCCCCTTGAACTCATTCACAAACGCATCTTTTTTTTCTTGAATATCTATGGGGTGTTCCTTTGAct > 1:4956046/1‑93 (MQ=255)
aGACCTTGTATTTTTATCAAATAATACCCCCTTGAACTCATTCACAAACGCATCTTTTTTTTCTTGAATATCTATGGGGTGTTCCTTTGActc > 1:2044333/1‑93 (MQ=255)
aGACCTTGTATTTTTATCAAATAACACCCCCTTGAACTCATTCACAAACGCATCTTTTTTTTCTTGAATATCTATGGGGTGTTCCTTTGActc > 2:5986217/1‑93 (MQ=255)
gACCTTGTATTTTTATCAAATAATACCCCCTTGAACTCATTCACAAACGCATCTTTTTTTTCTTGAATATCTATGGGGTGTTCCTTTGActct < 2:4331772/93‑1 (MQ=255)
gACCTTGTATTTTTATCAAATAATACCCCCTTGAACTCATTCACAAACGCATCTTTTTTTTCTTGAATATCTATGGGGTGTTCCTTTGActct < 1:360050/93‑1 (MQ=255)
aCCTTGTATTTTTATCAAATAACACCCCCTTGAACTCATTCACAAACGCATCTTTTTTTTCTTGAATATCTATGGGGTGTTCCTTTGACTCTg < 1:2717385/93‑1 (MQ=255)
ttGTATTTTTATCAAATAATACCCCCTTGAACTCATTCACAAACGCATCTTTTTTTTCTTGAATATCTATGGGGTGTTCCTTTGACTCTGACa < 2:5764831/93‑1 (MQ=255)
ttGTATTTTTATCAAATAACACCCCCTTGAACTCATTCACAAACGCATCTTTTTTTTCTTGAATATCTATGGGGTGTTCCTTTGACTCTGACa < 1:231578/93‑1 (MQ=255)
tGTATTTTTATCAAATAACACCCCCTTGAACTCATTCACAAACGCATCTTTTTTTTCTTGAATATCTATGGGGTGTTCCTTTGACTCTGACaa > 2:4809228/1‑93 (MQ=255)
tGTATTTTTATCAAATAACACCCCCTTGAACTCATTCACAAACGCATCTTTTTTTTCTTGAATATCTATGGGGTGTTCCTTTGACTCTGACaa > 2:5217125/1‑93 (MQ=255)
ttATTTTTATCAAATAACACCCCCTTGAACTCATTCACAAACGCATCTTTTTTTTCTTGAATATCTATGGGGTGTTCCTTTGACTCTGACaaa < 2:4285178/92‑1 (MQ=255)
gTATTTTTATCAAATAACACCCCCTTGAACTCATTCACAAACGCATCTTTTTTTTCTTGAATATCTATGGGGTGTTCCTTTGACTCTGACaaa > 1:5440882/1‑93 (MQ=255)
aTTTTTATCAAATAATACCCCCTTGAACTCATTCACAAACGCATCTTTTTTTTCTTGAATATCTATGGGGTGTTCCTTTGACTCTGACAAAGa < 1:1068711/93‑1 (MQ=255)
tttttATCAAATAATACCCCCTTGAACTCATTCACAAACGCATCTTTTTTTTCTTGAATATCTATGGGGTGTTCCTTTGACTCTGACAAAGAt < 2:45004/93‑1 (MQ=255)
tttttATCAAATAACACCCCCTTGAACTCATTCACAAACGCATCTTTTTTTTCTTGAATATCTATGGGGTGTTCCTTTGACTCTGACAAAGAt < 2:2357143/93‑1 (MQ=255)
tttttATCAAATAACACCCCCTTGAACTCATTCACAAACGCATCTTTTTTTTCTTGAATATCTATGGGGTGTTCCTTTGACTCTGACAAAGAt < 1:3998972/93‑1 (MQ=255)
tATCAAATAACACCCCCTTGAACTCATTCACAAACGCATCTTTTTTTTCTTGAATATCTATGGGGTGTTCCTTTGACTCTGACAAAGATGaaa < 2:941025/93‑1 (MQ=255)
tCAAATAACACCCCCTTGAACTCATTCACAAACGCATCTTTTTTTTCTTGAATATCTATGGGGTGTTCCTTTGACTCTGACAAAGATGAAAtc > 1:4432986/1‑93 (MQ=255)
aaaTAATACCCCCTTGAACTCATTCACAAACGCATCTTTTTTTTCTTGAATATCTATGGGGTGTTCCTTTGACTCTGACAAAGATGAAAtctc > 1:4926133/1‑93 (MQ=255)
aaaTAATACCCCCTTGAACTCATTCACAAACGCATCTTTTTTTTCTTGAATATCTATGGGGTGTTCCTTTGACTCTGACAAAGATGAAAtctc > 2:4024341/1‑93 (MQ=255)
aaaTAACACCCCCTTGAACTCATTCACAAACGCATCTTTTTTTTCTTGAATATCTATGGGGTGTTCCTTTGACTCTGACAAAGATGAAAtctc < 1:1626855/93‑1 (MQ=255)
aataacACCCCCTTGAACTCATTCACAAACGCATCTTTTTTTTCTTGAATATCTATGGGGTGTTCCTTTGACTCTGACAAAGATGAAATCTCa < 2:2581440/93‑1 (MQ=255)
ataacaCCCCCTTGAACTCATTCACAAACGCATCTTTTTTTTCTTGAATATCTATGGGGTGTTCCTTTGACTCTGACAAAGATGAAATCTCAt > 2:4582660/1‑93 (MQ=255)
ataacaCCCCCTTGAACTCATTCACAAACGCATCTTTTTTTTCTTGAATATCTATGGGGTGTTCCTTTGACTCTGACAAAGATGAAATCTCAt > 2:2965173/1‑93 (MQ=255)
taacaCCCCCTTGAACTCATTCACAAACGCATCTTTTTTTTCTTGAATATCTATGGGGTGTTCCTTTGACTCTGACAAAGATGAAATCTCATc > 1:5630134/1‑93 (MQ=255)
taacaCCCCCTTGAACTCATTCACAAACGCATCTTTTTTTTCTTGAATATCTATGGGGTGTTCCTTTGACTCTGACAAAGATGAAATCTCATc > 1:5492459/1‑93 (MQ=255)
|
TATCTTGAGGCTGAGCTCTTGGTAAAAACTTATAGCAACACTCATAAAAATTAAACAGAAGCTCTGAAGACCTTGTATTTTTATCAAATAATACCCCCTTGAACTCATTCACAAACGCATCTTTTTTTTCTTGAATATCTATGGGGTGTTCCTTTGACTCTGACAAAGATGAAATCTCATC > NC_000913/2782236‑2782416
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
TTATCTTGAGGCTGAGCTCTTGGTAAAAACTTATAGCAACACTCATAAAAATTAAACAGAAGCTCTGAAGACCTTGTATTTTTATCAAATAATACCCCCTTGAACTCATTCACAAACGCATCTTTTTTTTCTTGAATATCTATGGGGTGTTCCTTTGACTCTGACAAAGATGAAATCTCATCTATT > NC_000913/2782235‑2782420
|
TTATCTTGAGGCTGAGCTCTTGGTAAAAACTTATAGCAACACTCATAAAAATTAAACAGAAGCTCTGAAGACCTTGTATTTTTATCAAATAATA > SRR4302547.6658809/1‑94 (MQ=60)
TATCTTGAGGCTGAGCTCTTGGTAAAAACTTATAGCAACACTCATAAAAATTAAACAGAAGCTCTGAAGACCTTGTATTTTTATCAAATAACAC < SRR4302547.2983937/94‑1 (MQ=60)
TATCTTGAGGCTGAGCTCTTGGTAAAAACTTATAGCAACACTCATAAAAATTAAACAGAAGCTCTGAAGACCTTGTATTTTTATCAAATAACAC > SRR4302547.3191770/1‑94 (MQ=60)
ATCTTGAGGCTGAGCTCTTGGTAAAAACTTATAGCAACACTCATAAAAATTAAACAGAAGCTCTGAAGACCTTGTATTTTTATCAAATAACACC < SRR4302547.3239480/94‑1 (MQ=60)
TTGAGGCTGAGCTCTTGGTAAAAACTTATAGCAACACTCATAAAAATTAAACAGAAGCTCTGAAGACCTTGTATTTTTATCAAATAACACCCCC > SRR4302547.4347178/1‑94 (MQ=60)
TTGAGGCTGAGCTCTTGGTAAAAACTTATAGCAACACTCATAAAAATTAAACAGAAGCTCTGAAGACCTTGTATTTTTATCAAATAACACCCCC < SRR4302547.6046415/94‑1 (MQ=60)
TTGAGGCTGAGCTCTTGGTAAAAACTTATAGCAACACTCATAAAAATTAAACAGAAGCTCTGAAGACCTTGTATTTTTATCAAATAACACCCCC < SRR4302547.734955/94‑1 (MQ=60)
TTGAGGCTGAGCTCTTGGTAAAAACTTATAGCAACACTCATAAAAATTAAACAGAAGCTCTGAAGACCTTGTATTTTTATCAAATAACACCCCC < SRR4302547.4841119/94‑1 (MQ=60)
GAGGCTGAGCTCTTGGTAAAAACTTATAGCAACACTCATAAAAATTAAACAGAAGCTCTGAAGACCTTGTATTTTTATCAAATAACACCCCCTT > SRR4302547.3164380/1‑94 (MQ=60)
TGGCTGAGCTCTTGGTAAAAACTTATAGCAACACTCATAAAAATTAAACAGAAGCTCTGAAGACCTTGTATTTTTATCAAATAATACCCCCTTG > SRR4302547.2871199/1‑94 (MQ=60)
AGGCTGAGCTCTTGGTAAAAACTTATAGCAACACTCATAAAAATTAAACAGAAGCTCTGAAGACCTTGTATTTTTATCAAATAACACCCCCTTG > SRR4302547.5519011/1‑94 (MQ=60)
CTGAGCTCTTGGTAAAAACTTATAGCAACACTCATAAAAATTAAACAGAAGCTCTGAAGACCTTGTATTTTTATCAAATAACACCCCCTTGAAC > SRR4302547.5983647/1‑94 (MQ=60)
TGAGCTCTTGGTAAAAACTTATAGCAACACTCATAAAAATTAAACAGAAGCTCTGAAGACCTTGTATTTTTATCAAATAACACCCCCTTGAACT > SRR4302547.5154272/1‑94 (MQ=60)
GAGCTCTTGGTAAAAACTTATAGCAACACTCATAAAAATTAAACAGAAGCTCTGAAGACCTTGTATTTTTATCAAATAACACCCCCTTGAACTC < SRR4302547.1270403/94‑1 (MQ=60)
GAGCTCTTGGTAAAAACTTATAGCAACACTCATAAAAATTAAACAGAAGCTCTGAAGACCTTGTATTTTTATCAAATAACACCCCCTTGAACTC < SRR4302547.306427/94‑1 (MQ=60)
GCTCTTGGTAAAAACTTATAGCAACACTCATAAAAATTAAACAGAAGCTCTGAAGACCTTGTATTTTTATCAAATAACACCCCCTTGAACTCAT < SRR4302547.3701540/94‑1 (MQ=60)
CTCTTGGTAAAAACTTATAGCAACACTCATAAAAATTAAACAGAAGCTCTGAAGACCTTGTATTTTTATCAAATAATACCCCCTTGAACTCATT < SRR4302547.2496645/94‑1 (MQ=60)
CTCTTGGTAAAAACTTATAGCAACACTCATAAAAATTAAACAGAAGCTCTGAAGACCTTGTATTTTTATCAAATAACACCCCCTTGAACTCATT < SRR4302547.4445561/94‑1 (MQ=60)
CTTGGTAAAAACTTATAGCAACACTCATAAAAATTAAACAGAAGCTCTGAAGACCTTGTATTTTTATCAAATAATACCCCCTTGAACTCATTCA < SRR4302547.76271/94‑1 (MQ=60)
CTTGGTAAAAACTTATAGCAACACTCATAAAAATTAAACAGAAGCTCTGAAGACCTTGTATTTTTATCAAATAACACCCCCTTGAACTCATTCA > SRR4302547.2478906/1‑94 (MQ=60)
CTTGGTAAAAACTTATAGCAACACTCATAAAAATTAAACAGAAGCTCTGAAGACCTTGTATTTTTATCAAATAACACCCCCTTGAACTCATTCA > SRR4302547.1451740/1‑94 (MQ=60)
TGGTAAAAACTTATAGCAACACTCATAAAAATTAAACAGAAGCTCTGAAGACCTTGTATTTTTATCAAATAACACCCCCTTGAACTCATTCACA < SRR4302547.6095686/94‑1 (MQ=60)
GGTAAAAACTTATAGCAACACTCATAAAAATTAAACAGAAGCTCTGAAGACCTTGTATTTTTATCAAATAACACCCCCTTGAACTCATTCACAA > SRR4302547.5186208/1‑94 (MQ=60)
AAAAACTTATAGCAACACTCATAAAAATTAAACAGAAGCTCTGAAGACCTTGTATTTTTATCAAATAACACCCCCTTGAACTCATTCACAAACG < SRR4302547.4392576/94‑1 (MQ=60)
AAAAACTTATAGCAACACTCATAAAAATTAAACAGAAGCTCTGAAGACCTTGTATTTTTATCAAATAACACCCCCTTGAACTCATTCACAAACG < SRR4302547.2962405/94‑1 (MQ=60)
AAAACTTATAGCAACACTCATAAAAATTAAACAGAAGCTCTGAAGACCTTGTATTTTTATCAAATAACACCCCCTTGAACTCATTCACAAACGC < SRR4302547.3891184/94‑1 (MQ=60)
AAACTTATAGCAACACTCATAAAAATTAAACAGAAGCTCTGAAGACCTTGTATTTTTATCAAATAACACCCCCTTGAACTCATTCACACACGCA > SRR4302547.2218978/1‑94 (MQ=60)
AAACTTATAGCAACACTCATAAAAATTAAACAGAAGCTCTGAAGACCTTGTATTTTTATCAAATAACACCCCCTTGAACTCATTCACAAACGCA > SRR4302547.1791440/1‑94 (MQ=60)
ACTTATAGCAACACTCATAAAAATTAAACAGAAGCTCTGAAGACCTTGTATTTTTATCAAATAACACCCCCTTGAACTCATTCACAAACGCATC > SRR4302547.4788667/1‑94 (MQ=60)
ACTTATAGCAACACTCATAAAAATTAAACAGAAGCTCTGAAGACCTTGTATTTTTATCAAATAACACCCCCTTGAACTCATTCACAAACGCATC > SRR4302547.3859460/1‑94 (MQ=60)
ACTTATAGCAACACTCATAAAAATTAAACAGAAGCTCTGAAGACCTTGTATTTTTATCAAATAACACCCCCTTGAACTCATTCACAAACGCATC > SRR4302547.6323920/1‑94 (MQ=60)
ACTTATAGCAACACTCATAAAAATTAAACAGAAGCTCTGAAGACCTTGTATTTTTATCAAATAACACCCCCTTGAACTCATTCACAAACGCATC > SRR4302547.2697793/1‑94 (MQ=60)
CTTATAGCAACACTCATAAAAATTAAACAGAAGCTCTGAAGACCTTGTATTTTTATCAAATAATACCCCCTTGAACTCATTCACAAACGCATCT > SRR4302547.3612046/1‑94 (MQ=60)
TTATAGCAACACTCATAAAAATTAAACAGAAGCTCTGAAGACCTTGTATTTTTATCAAATAACACCCCCTTGAACTCATTCACAAACGCATCTT < SRR4302547.3551864/94‑1 (MQ=60)
TATAGCAACACTCATAAAAATTAAACAGAAGCTCTGAAGACCTTGTATTTTTATCAAATAATACCCCCTTGAACTCATTCACAAACGCATCTTT > SRR4302547.5172352/1‑94 (MQ=60)
TATAGCAACACTCATAAAAATTAAACAGAAGCTCTGAAGACCTTGTATTTTTATCAAATAACACCCCCTTGAACTCATTCACAAACGCATCTTT > SRR4302547.1765693/1‑94 (MQ=60)
ATAGCAACACTCATAAAAATTAAACAGAAGCTCTGAAGACCTTGTATTTTTATCAAATAATACCCCCTTGAACTCATTCACAAACGCATCTTTT > SRR4302547.6364855/1‑94 (MQ=60)
ATAGCAACACTCATAAAAATTAAACAGAAGCTCTGAAGACCTTGTATTTTTATCAAATAACACCCCCTTGAACTCATTCACAAACGCATCTTTT < SRR4302547.1142792/94‑1 (MQ=60)
TAGCAACACTCATAAAAATTAAACAGAAGCTCTGAAGACCTTGTATTTTTATCAAATAACACCCCCTTGAACTCATTCACAAACGCATCTTTTT < SRR4302547.3017409/94‑1 (MQ=60)
AGCAACACTCATAAAAATTAAACAGAAGCTCTGAAGACCTTGTATTTTTATCAAATAACACCCCCTTGAACTCATTCACAAACGCATCTTTTTT > SRR4302547.5653071/1‑94 (MQ=60)
GCAACACTCATAAAAATTAAACAGAAGCTCTGAAGACCTTGTATTTTTATCAAATAACACCCCCTTGAACTCATTCACAAACGCATCTTTTTTT < SRR4302547.714370/94‑1 (MQ=60)
CAACACTCATAAAAATTAAACAGAAGCTCTGAAGACCTTGTATTTTTATCAAATAACACCCCCTTGAACTCATTCACAAACGCATCTTTTTTTT > SRR4302547.3979349/1‑94 (MQ=60)
CAACACTCATAAAAATTAAACAGAAGCTCTGAAGACCTTGTATTTTTATCAAATAACACCCCCTTGAACTCATTCACAAACGCATCTTTTTTTT < SRR4302547.1782064/94‑1 (MQ=60)
AACACTCATAAAAATTAAACAGAAGCTCTGAAGACCTTGTATTTTTATCAAATAACACCCCCTTGAACTCATTCACAAACGCATCTTTTTTTTC > SRR4302547.4288464/1‑94 (MQ=60)
CACTCATAAAAATTAAACAGAAGCTCTGAAGACCTTGTATTTTTATCAAATAACACCCCCTTGAACTCATTCACAAACGCATCTTTTTTTTCTT < SRR4302547.1405845/94‑1 (MQ=60)
ACTCATAAAAATTAAACAGAAGCTCTGAAGACCTTGTATTTTTATCAAATAACACCCCCTTGAACTCATTCACAAACGCATCTTTTTTTTCTTG < SRR4302547.3464804/94‑1 (MQ=60)
ACTCATAAAAATTAAACAGAAGCTCTGAAGACCTTGTATTTTTATCAAATAACACCCCCTTGAACTCATTCACAAACGCATCTTTTTTTTCTTG < SRR4302547.1500884/94‑1 (MQ=60)
ACTCATAAAAATTAAACAGAAGCTCTGAAGACCTTGTATTTTTATCAAATAACACCCCCTTGAACTCATTCACAAACGCATCTTTTTTTTCTTG < SRR4302547.4203628/94‑1 (MQ=60)
CTCATAAAAATTAAACAGAAGCTCTGAAGACCTTGTATTTTTATCAAATAACACCCCCTTGAACTCATTCACAAACGCATCTTTTTTTTCTTGA < SRR4302547.4060152/94‑1 (MQ=60)
CTCATAAAAATTAAACAGAAGCTCTGAAGACCTTGTATTTTTATCAAATAACACCCCCTTGAACTCATTCACAAACGCATCTTTTTTTTCTTGA > SRR4302547.4334296/1‑94 (MQ=60)
TCATAAAAATTAAACAGAAGCTCTGAAGACCTTGTATTTTTATCAAATAACACCCCCTTGAACTCATTCACAAACGCATCTTTTTTTTCTTGAA > SRR4302547.5200454/1‑94 (MQ=60)
CATAAAAATTAAACAGAAGCTCTGAAGACCTTGTATTTTTATCAAATAACACCCCCTTGAACTCATTCACAAACGCATCTTTTTTTTCTTGAAT < SRR4302547.1008337/94‑1 (MQ=60)
ATAAAAATTAAACAGAAGCTCTGAAGACCTTGTATTTTTATCAAATAACACCCCCTTGAACTCATTCACAAACGCATCTTTTTTTTCTTGAATA < SRR4302547.4998133/94‑1 (MQ=60)
ATAAAAATTAAACAGAAGCTCTGAAGACCTTGTATTTTTATCAAATAACACCCCCTTGAACTCATTCACAAACGCATCTTTTTTTTCTTGAATA > SRR4302547.905076/1‑94 (MQ=60)
TAAAAATTAAACAGAAGCTCTGAAGACCTTGTATTTTTATCAAATAATACCCCCTTGAACTCATTCACAAACGCATCTTTTTTTTCTTGAATAT > SRR4302547.5138048/1‑94 (MQ=60)
TAAAAATTAAACAGAAGCTCTGAAGACCTTGTATTTTTATCAAATAACACCCCCTTGAACTCATTCACAAACGCATCTTTTTTTTCTTGAATAT < SRR4302547.3713145/94‑1 (MQ=60)
AAGATTAAACAGAAGCTCTGAAGACCTTGTATTTTTATCAAATAACACCCCCTTGAACTCATTCACAAACGCATCTTTTTTTTCTTGAATATCT > SRR4302547.6684610/1‑94 (MQ=60)
AAAATTAAACAGAAGCTCTGAAGACCTTGTATTTTTATCAAATAACACCCCCTTGAACTCATTCACAAACGCATCTTTTTTTTCTTGAATATCT > SRR4302547.5482156/1‑94 (MQ=60)
AAATTAAACAGAAGCTCTGAAGACCTTGTATTTTTATCAAATAACACCCCCTTGAACTCATTCACAAACGCATCTTTTTTTTCTTGAATATCTA > SRR4302547.4701580/1‑94 (MQ=60)
ATTAAACAGAAGCTCTGAAGACCTTGTATTTTTATCAAATAATACCCCCTTGAACTCATTCACAAACGCATCTTTTTTTTCTTGAATATCTATG > SRR4302547.4044184/1‑94 (MQ=60)
ATTAAACAGAAGCTCTGAAGACCTTGTATTTTTATCAAATAACACCCCCTTGAACTCATTCACAAACGCATCTTTTTTTTCTTGAATATCTATG < SRR4302547.1376497/94‑1 (MQ=60)
TTAAACAGAAGCTCTGAAGACCTTGTATTTTTATCAAATAACACCCCCTTGAACTCATTCACAAACGCATCTTTTTTTTCTTGAATATCTATGG < SRR4302547.3949722/94‑1 (MQ=60)
TAAACAGAAGCTCTGAAGACCTTGTATTTTTATCAAATAATTCCCCCTTGAACTCATTCACAAACGCATCTTTTTTTTCTTTAATATCTATGGG < SRR4302547.3082622/94‑1 (MQ=60)
TAAACAGAAGCTCTGAAGACCTTGTATTTTTATCAAATAACACCCCCTTGAACTCATTCACAAACGCATCTTTTTTTTCTTGAATATCTATGGG < SRR4302547.5582544/94‑1 (MQ=60)
TAAACAGAAGCTCTGAAGACCTTGTATTTTTATCAAATAACACCCCCTTGAACTCATTCACAAACGCATCTTTTTTTTCTTGAATATCTATGGG < SRR4302547.1654497/94‑1 (MQ=60)
AAACAGAAGCTCTGAAGACCTTGTATTTTTATCAAATAACACCCCCTTGAACTCATTCACAAACGCATCTTTTTTTTCTTGAATATCTATGGGG > SRR4302547.5618995/1‑94 (MQ=60)
AAACAGAAGCTCTGAAGACCTTGTATTTTTATCAAATAACACCCCCTTGAACTCATTCACAAACGCATCTTTTTTTTCTTGAATATCTATGGGG > SRR4302547.6404177/1‑94 (MQ=60)
ACAGAAGCTCTGAAGACCTTGTATTTTTATCAAATAACACCCCCTTGAACTCATTCACAAACGCATCTTTTTTTTCTTGAATATCTATGGGGTG < SRR4302547.5752606/94‑1 (MQ=60)
GCTCTGAAGACCTTGTATTTTTATCAAATAACACCCCCTTGAACTCATTCACAAACGCATCTTTTTTTTCTTGAATATCTATGGGGTGTTCCTT > SRR4302547.1746018/1‑94 (MQ=60)
GCTCTGAAGACCTTGTATTTTTATCAAATAACACCCCCTTGAACTCATTCACAAACGCATCTTTTTTTTCTTGAATATCTATGGGGTGTTCCTT < SRR4302547.5696196/94‑1 (MQ=60)
CTCTGAAGACCTTGTATTTTTATCAAATAACACCCCCTTGAACTCATTCACAAACGCATCTTTTTTTTCTTGAATATCTATGGGGTGTTCCTTT < SRR4302547.5499864/94‑1 (MQ=60)
CTCTGAAGACCTTGTATTTTTATCAAATAACACCCCCTTGAACTCATTCACAAACGCATCTTTTTTTTCTTGAATATCTATGGGGTGTTCCTTT < SRR4302547.636016/94‑1 (MQ=60)
CTCTGAAGACCTTGTATTTTTATCAAATAACACCCCCTTGAACTCATTCACAAACGCATCTTTTTTTTCTTGAATATCTATGGGGTGTTCCTTT > SRR4302547.1225864/1‑94 (MQ=60)
CTGAAGACCTTGTATTTTTATCAAATAACACCCCCTTGAACTCATTCACAAACGCATCTTTTTTTTCTTGAATATCTATGGGGTGTTCCTTTGA > SRR4302547.463031/1‑94 (MQ=60)
GAAGACCTTGTATTTTTATCAAATAACACCCCCTTGAACTCATTCACAAACGCATCTTTTTTTTCTTGAATATCTATGGGGTGTTCCTTTGACT > SRR4302547.5058627/1‑94 (MQ=60)
GAAGACCTTGTATTTTTATCAAATAACACCCCCTTGAACTCATTCACAAACGCATCTTTTTTTTCTTGAATATCTATGGGGTGTTCCTTTGACT > SRR4302547.5058626/1‑94 (MQ=60)
GAAGACCTTGTATTTTTATCAAATAACACCCCCTTGAACTCATTCACAAACGCATCTTTTTTTTCTTGAATATCTATGGGGTGTTCCTTTGACT > SRR4302547.4859246/1‑94 (MQ=60)
AAGACCTTGTATTTTTATCAAATAATACCCCCTTGAACTCATTCACAAACGCATCTTTTTTTTCTTGAATATCTATGGGGTGTTCCTTTGACTC > SRR4302547.2085112/1‑94 (MQ=60)
AGACCTTGTATTTTTATCAAATAACACCCCCTTGAACTCATTCACAAACGCATCTTTTTTTTCTTGAATATCTATGGGGTGTTCCTTTGACTCT > SRR4302547.1984883/1‑94 (MQ=60)
AGACCTTGTATTTTTATCAAATAACACCCCCTTGAACTCATTCACAAACGCATCTTTTTTTTCTTGAATATCTATGGGGTGTTCCTTTGACTCT > SRR4302547.5064021/1‑94 (MQ=60)
GACCTTGTATTTTTATCAAATAATACCCCCTTGAACTCATTCACAAACGCATCTTTTTTTTCTTGAATATCTATGGGGTGTTCCTTTGACTCTG < SRR4302547.366728/94‑1 (MQ=60)
ACCTTGTATTTTTATCAAATAACACCCCCTTGAACTCATTCACAAACGCATCTTTTTTTTCTTGAATATCTATGGGGTGTTCCTTTGACTCTGA < SRR4302547.4483380/94‑1 (MQ=60)
ACCTTGTATTTTTATCAAATAACACCCCCTTGAACTCATTCACAAACGCATCTTTTTTTTCTTGAATATCTATGGGGTGTTCCTTTGACTCTGA < SRR4302547.2771936/94‑1 (MQ=60)
CCTTGTATTTTTATCAAATAACACCCCCTTGAACTCATTCACAAACGCATCTTTTTTTTCTTGAATATCTATGGGGTGTTCCTTTGACTCTGAC > SRR4302547.2644152/1‑94 (MQ=60)
CCTTGTATTTTTATCAAATAACACCCCCTTGAACTCATTCACAAACGCATCTTTTTTTTCTTGAATATCTATGGGGTGTTCCTTTGACTCTGAC > SRR4302547.5670120/1‑94 (MQ=60)
CCTTGTATTTTTATCAAATAACACCCCCTTGAACTCATTCACAAACGCATCTTTTTTTTCTTGAATATCTATGGGGTGTTCCTTTGACTCTGAC > SRR4302547.2743498/1‑94 (MQ=60)
CTTGTATTTTTATCAAATAACACCCCCTTGAACTCATTCACAAACGCATCTTTTTTTTCTTGAATATCTATGGGGTGTTCCTTTGACTCTGACA < SRR4302547.5703017/94‑1 (MQ=60)
TTGTATTTTTATCAAATAACACCCCCTTGAACTCATTCACAAACGCATCTTTTTTTTCTTGAATATCTATGGGGTGTTCCTTTGACTCTGACAA < SRR4302547.235936/94‑1 (MQ=60)
TGTATTTTTATCAAATAACACCCCCTTGAACTCATTCACAAACGCATCTTTTTTTTCTTGAATATCTATGGGGTGTTCCTTTGACTCTGACAAA > SRR4302547.5553322/1‑94 (MQ=60)
ATTTTTATCAAATAATACCCCCTTGAACTCATTCACAAACGCATCTTTTTTTTCTTGAATATCTATGGGGTGTTCCTTTGACTCTGACAAAGAT < SRR4302547.1089992/94‑1 (MQ=60)
TTTTTATCAAATAACACCCCCTTGAACTCATTCACAAACGCATCTTTTTTTTCTTGAATATCTATGGGGTGTTCCTTTGACTCTGACAAAGATG < SRR4302547.2945009/94‑1 (MQ=60)
TTTTTATCAAATAACACCCCCTTGAACTCATTCACAAACGCATCTTTTTTTTCTTGAATATCTATGGGGTGTTCCTTTGACTCTGACAAAGATG < SRR4302547.4080263/94‑1 (MQ=60)
TTTTATCAAATAACACCCCCTTGAACTCATTCACAAACGCATCTTTTTTTTCTTGAATATCTATGGGGTGTTCCTTTGACTCTGACAAAGATGA < SRR4302547.2335508/94‑1 (MQ=60)
TTTTATCAAATAACACCCCCTTGAACTCATTCACAAACGCATCTTTTTTTTCTTGAATATCTATGGGGTGTTCCTTTGACTCTGACAAAGATGA < SRR4302547.1423716/94‑1 (MQ=60)
ATCAAATAATACCCCCTTGAACTCATTCACAAACGCATCTTTTTTTTCTTGAATATCTATGGGGTGTTCCTTTGACTCTGACAAAGATGAAATC > SRR4302547.3519188/1‑94 (MQ=60)
ATCAAATAACACCCCCTTGAACTCATTCACAAACGCATCTTTTTTTTCTTGAATATCTATGGGGTGTTCCTTTGACTCTGACAAAGATGAAATC > SRR4302547.4524623/1‑94 (MQ=60)
ATCAAACAACACCCCCTTGAACTCATTCACAAACGCATCTTTTTTTTCTTGAATATCTATGGGGTGTTCCTTTGACTCTGACAAAGATGAAATC > SRR4302547.4417146/1‑94 (MQ=60)
CAAATAATACCCCCTTGAACTCATTCACAAACGCATCTTTTTTTTCTTGAATATCTATGGGGTGTTCCTTTGACTCTGACAAAGATGAAATCTC > SRR4302547.6073928/1‑94 (MQ=60)
CAAATAATACCCCCTTGAACTCATTCACAAACGCATCTTTTTTTTCTTGAATATCTATGGGGTGTTCCTTTGACTCTGACAAAGATGAAATCTC > SRR4302547.5028167/1‑94 (MQ=60)
AAATAACACCCCCTTGAACTCATTCACAAACGCATCTTTTTTTTCTTGAATATCTATGGGGTGTTCCTTTGACTCTGACAAAGATGAAATCTCA < SRR4302547.1659039/94‑1 (MQ=60)
ATAACACCCCCTTGAACTCATTCACAAACGCATCTTTTTTTTCTTGAATATCTATGGGGTGTTCCTTTGACTCTGACAAAGATGAAATCTCATC > SRR4302547.5746329/1‑94 (MQ=60)
ATAACACCCCCTTGAACTCATTCACAAACGCATCTTTTTTTTCTTGAATATCTATGGGGTGTTCCTTTGACTCTGACAAAGATGAAATCTCATC > SRR4302547.5605869/1‑94 (MQ=60)
AACACCCCCTTGAACTCATTCACAAACGCATCTTTTTTTTCTTGAATATCTATGGGGTGTTCCTTTGACTCTGACAAAGATGAAATCTCATCTA < SRR4302547.663450/94‑1 (MQ=60)
CACCCCCTTGAACTCATTCACAAACGCATCTTTTTTTTCTTGAATATCTATGGGGTGTTCCTTTGACTCTGACAAAGATGAAATCTCATCTATT > SRR4302547.4048388/1‑94 (MQ=60)
|
TTATCTTGAGGCTGAGCTCTTGGTAAAAACTTATAGCAACACTCATAAAAATTAAACAGAAGCTCTGAAGACCTTGTATTTTTATCAAATAATACCCCCTTGAACTCATTCACAAACGCATCTTTTTTTTCTTGAATATCTATGGGGTGTTCCTTTGACTCTGACAAAGATGAAATCTCATCTATT > NC_000913/2782235‑2782420
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
