Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A1 F1 I2 R1	593	264.2	13311096	97.8%	13018251	93.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,236,735	+C	coding (514/966 nt)	ygjT →	putative transport protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,236,734	1	.	C	100.0%	1015.9 / NA	276	K171N (AAG→AAC)	ygjT	putative transport protein
Reads supporting (aligned to +/- strand): ref base . (0/0); new base C (138/138); total (138/138)

Only 100 of 319 total aligned reads displayed.

GACTGGATCCTGTATATCTTCGGTGCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAG‑CGCTGGTGCGCTGGCTACGCGGTTCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGGATTGCTGT  >  NC_000913/3236642‑3236822

gACTGGATCCTGTATATCTTCGGTGCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAg                                                                                           <  2:2649820/93‑1 (MQ=255)

 aCTGGATCCTGTATATCTTCGGTGCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGTCCATGAAGATGAATCAGGCATTGGCGACAAg‑c                                                                                         >  2:3436677/1‑93 (MQ=255)

 aCTGGATCCTGTATATCTTCGGTGCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAg‑c                                                                                         >  2:6265786/1‑93 (MQ=255)

 aCTGGATCCTGTATATCTTCGGTGCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAg‑c                                                                                         >  2:4118310/1‑93 (MQ=255)

  cTGGATCCTGTATATCTTCGGTGCCTTCCTGCTGTTTACCGGCGTGGAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAg‑cc                                                                                        >  1:4239872/1‑92 (MQ=255)

  cTGGATCCTGTATATCTTCGGTGCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAg‑cc                                                                                        >  1:5603320/1‑92 (MQ=255)

   tGGATCCTGTATATCTTCGGTGCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAg‑ccg                                                                                       >  1:5506384/1‑91 (MQ=255)

   tGGATCCTGTATATCTTCGGTGCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAg‑ccg                                                                                       >  2:2079445/1‑91 (MQ=255)

    ggATCCTGTATATCTTCGGTGCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCGGGCATTGGCGACAAg‑ccgc                                                                                      <  1:6492493/93‑4 (MQ=255)

     gATCCTGTATATCTTCGGTGCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAg‑ccgct                                                                                     <  1:3275901/93‑5 (MQ=255)

         cTGTATATCTTCGGTGCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTg                                                                                  >  1:4395772/1‑93 (MQ=255)

          tGTATATCTTCGGTGCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTgc                                                                                 <  1:4157485/93‑1 (MQ=255)

           gTATATCTTCGGTGCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTgcg                                                                                >  1:576296/1‑93 (MQ=255)

           gTATATCTTCGGTGCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTgcg                                                                                >  2:2002037/1‑93 (MQ=255)

            tataTCTTCGGTGCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTgcgc                                                                               <  1:2784098/93‑1 (MQ=255)

            tataTCTTCGGTGCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTgcgc                                                                               <  2:5075792/93‑1 (MQ=255)

             atatCTTCGGTGCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCt                                                                              <  1:5324633/93‑1 (MQ=255)

               atCTTCGGTGCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTgg                                                                            <  1:4572933/93‑1 (MQ=255)

                 cTTCGGTGCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCt                                                                          >  2:5349595/1‑93 (MQ=255)

                  ttCGGTGCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTa                                                                         <  2:1688352/93‑1 (MQ=255)

                    cGGTGCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTAcg                                                                       <  2:2362892/93‑1 (MQ=255)

                      gTGCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCAACAAGCCGCTGGTGCGCTGGCTAcgcg                                                                     <  1:3650363/93‑1 (MQ=255)

                       tGCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCgg                                                                    <  2:5627555/93‑1 (MQ=255)

                        gCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGGt                                                                   >  1:2684578/1‑93 (MQ=255)

                         ccTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGGtc                                                                  >  1:1804785/1‑92 (MQ=255)

                           ttCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGGtcat                                                                >  1:4127457/1‑90 (MQ=255)

                           ttCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGGtcat                                                                >  1:6573339/1‑90 (MQ=255)

                             ccTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCAttt                                                             <  2:297105/93‑1 (MQ=255)

                                gctgTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTgcg                                                          >  2:4009059/1‑93 (MQ=255)

                                gctgTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTgcg                                                          >  2:5275613/1‑93 (MQ=255)

                                gctgTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTgcg                                                          >  1:2352522/1‑93 (MQ=255)

                                gctgTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTgcg                                                          >  1:114987/1‑93 (MQ=255)

                                 ctgTTTACCGGCGTGAAGATGGCGCTCGCCCATGAGGATGAATCAGGCATTGGCGACAAGCCGCTGGCGCGCTGGCTACGCGG‑TCATTTgcgc                                                         >  2:1525680/1‑93 (MQ=255)

                                 ctgTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTgcgc                                                         >  2:5963642/1‑93 (MQ=255)

                                  tgTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCa                                                        >  1:607058/1‑93 (MQ=255)

                                  tgTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCa                                                        >  1:5488783/1‑93 (MQ=255)

                                  tgTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCa                                                        >  2:908359/1‑93 (MQ=255)

                                   gTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCAt                                                       >  1:2827461/1‑93 (MQ=255)

                                   gTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCAt                                                       >  1:1477664/1‑93 (MQ=255)

                                   gTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCAt                                                       >  2:2565912/1‑93 (MQ=255)

                                    tttACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATg                                                      <  2:4519346/93‑1 (MQ=255)

                                     ttACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGa                                                     <  2:802367/93‑1 (MQ=255)

                                     ttACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGC‑GTTCATTTGCGCATGa                                                     <  1:778257/93‑1 (MQ=255)

                                      tACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGAc                                                    <  1:1279414/93‑1 (MQ=255)

                                      tACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGAc                                                    >  1:5133196/1‑93 (MQ=255)

                                      tACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGAc                                                    <  1:6370274/93‑1 (MQ=255)

                                       aCCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGAcc                                                   >  2:2221551/1‑93 (MQ=255)

                                       aCCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGAcc                                                   <  1:1931790/93‑1 (MQ=255)

                                          ggCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGac                                                <  1:4960226/93‑1 (MQ=255)

                                          ggCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGac                                                <  2:4628963/93‑1 (MQ=255)

                                             gTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACAcc                                             >  1:2158138/1‑93 (MQ=255)

                                               gAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCAt                                           <  1:1584592/93‑1 (MQ=255)

                                                aaGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATc                                          <  1:303159/93‑1 (MQ=255)

                                                 aGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCg                                         >  2:5872615/1‑93 (MQ=255)

                                                  gATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGa                                        <  2:3695423/93‑1 (MQ=255)

                                                  gATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGa                                        <  2:3093331/93‑1 (MQ=255)

                                                  gATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGa                                        >  2:5587064/1‑93 (MQ=255)

                                                   aTGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGAc                                       >  2:2774744/1‑93 (MQ=255)

                                                   aTGGCCCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGAc                                       <  2:1936279/93‑1 (MQ=255)

                                                     ggCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACaa                                     <  1:4649060/93‑1 (MQ=255)

                                                      gcgcTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAAc                                    <  2:5544284/93‑1 (MQ=255)

                                                       cgcTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACg                                   <  2:6012790/93‑1 (MQ=255)

                                                        gcTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGa                                  <  1:2573390/93‑1 (MQ=255)

                                                         cTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAg                                 >  2:6621248/1‑93 (MQ=255)

                                                           cGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCa                               <  1:6301994/93‑1 (MQ=255)

                                                           cGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCa                               >  1:1437181/1‑93 (MQ=255)

                                                             cccATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCAtt                             <  2:1224586/93‑1 (MQ=255)

                                                              ccATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCAttt                            >  1:4855941/1‑93 (MQ=255)

                                                               cATGACGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTc                           <  1:2246922/93‑1 (MQ=255)

                                                               cATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTc                           >  2:2141641/1‑93 (MQ=255)

                                                               cATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTc                           >  1:2867103/1‑93 (MQ=255)

                                                               cATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAAAGAGCATTTc                           >  1:3482/1‑93 (MQ=255)

                                                                aTGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCt                          >  1:2011246/1‑93 (MQ=255)

                                                                 agAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCtt                         <  2:405622/92‑1 (MQ=255)

                                                                  gAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCttt                        >  1:2020432/1‑93 (MQ=255)

                                                                  gAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCttt                        >  2:1041539/1‑93 (MQ=255)

                                                                   aaGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTtg                       >  1:3781094/1‑93 (MQ=255)

                                                                   aaGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTtg                       >  2:1723173/1‑93 (MQ=255)

                                                                    aGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTtgt                      <  2:3230828/93‑1 (MQ=255)

                                                                     gATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTtgtg                     >  1:4014218/1‑93 (MQ=255)

                                                                       aaaaTCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCg                   <  1:2482979/91‑1 (MQ=255)

                                                                        gAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGt                  <  2:485120/93‑1 (MQ=255)

                                                                         aaTCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTa                 <  2:3909955/93‑1 (MQ=255)

                                                                         aaTCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTa                 >  1:3920123/1‑93 (MQ=255)

                                                                          aTCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTaa                <  2:6241589/93‑1 (MQ=255)

                                                                           tCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAg               >  2:4237402/1‑93 (MQ=255)

                                                                           tCAGGCATGGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAg               <  2:145060/93‑1 (MQ=255)

                                                                            cAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGa              <  2:2873071/93‑1 (MQ=255)

                                                                             aGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGaa             <  1:602574/93‑1 (MQ=255)

                                                                             aGGCATTGGCGACAAGCCGCTGGGGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGaa             >  2:466058/1‑93 (MQ=255)

                                                                              ggCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAAt            <  2:1116114/93‑1 (MQ=255)

                                                                               gCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATg           <  1:2937603/93‑1 (MQ=255)

                                                                                cATTGGGGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATgg          <  1:4898261/93‑1 (MQ=255)

                                                                                 aTTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGGa         <  2:6492601/93‑1 (MQ=255)

                                                                                  ttGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGGAt        >  1:6168620/1‑93 (MQ=255)

                                                                                  ttGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGGAt        <  2:1407474/93‑1 (MQ=255)

                                                                                   tGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGGAtt       <  1:866041/93‑1 (MQ=255)

                                                                                       gACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGGATTGCTg   >  1:5837979/1‑93 (MQ=255)

                                                                                       gACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGGATTGCTg   <  2:6538903/93‑1 (MQ=255)

                                                                                        aCAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATTACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGGCTTTCTGt  >  1:1012381/1‑93 (MQ=255)

GACTGGATCCTGTATATCTTCGGTGCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAG‑CGCTGGTGCGCTGGCTACGCGGTTCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGGATTGCTGT  >  NC_000913/3236642‑3236822

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

BRESEQ :: bam2aln output

GACTGGATCCTGTATATCTTCGGTGCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAG‑CGCTGGTGCGCTGGCTACGCGGTTCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGGATTGCTGTACGCCAC  >  NC_000913/3236642‑3236829

GACTGGATCCTGTATATCTTCGGTGCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAG‑C                                                                                                >  SRR4302547.5950174/1‑94 (MQ=60)

GACTGGATCCTGTATATCTTCGGTGCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAG‑C                                                                                                >  SRR4302547.473498/1‑94 (MQ=60)

GACTGGATCCTGTATATCTTCGGTGCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAG‑C                                                                                                >  SRR4302547.5062654/1‑94 (MQ=60)

GACTGGATCCTGTATATCTTCGGTGCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGATCGCCCATGAAGATGAATCAGGAATTGGCGACAAG‑C                                                                                                >  SRR4302547.2950711/1‑94 (MQ=60)

 ACTGGATCCTGTATATCTTCGGTGCCTTCCTGCTGTTTACCGGCGTGGAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAG‑CC                                                                                               >  SRR4302547.4326574/1‑94 (MQ=60)

 ACTGGATCCTGTATATCTTCGGTGCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAG‑CC                                                                                               <  SRR4302547.4287093/94‑1 (MQ=60)

 ACTGGATCCTGTATATCTTCGGTGCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAG‑CC                                                                                               >  SRR4302547.6199424/1‑94 (MQ=60)

 ACTGGATCCTGTATATCTTCGGTGCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAG‑CC                                                                                               >  SRR4302547.5718912/1‑94 (MQ=60)

 ACTGGATCCTGTATATCTTCGGTGCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAG‑CC                                                                                               <  SRR4302547.228433/94‑1 (MQ=60)

  CTGGATCCTGTATATCTTCGGTGCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAG‑Ccg                                                                                              >  SRR4302547.5620078/1‑92 (MQ=60)

   TGGATCCTGTATATCTTCGGTGCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTTGCCCATGAAGATGAGTCAGGCATTGGCGACAAG‑Ccgc                                                                                             >  SRR4302547.41208/1‑91 (MQ=60)

   TGGATCCTGTATATCTTCGGTGCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAG‑Ccgc                                                                                             <  SRR4302547.6007826/94‑4 (MQ=60)

    GGATCCTGTATATCTTCGGTGCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCGGGCATTGGCGACAAGCCGCT                                                                                             <  SRR4302547.6627657/94‑1 (MQ=60)

    GGATCCTGTATATCTTCGGTGCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCT                                                                                             >  SRR4302547.3617326/1‑94 (MQ=60)

     GATCCTGTATATCTTCGGTGCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTG                                                                                            <  SRR4302547.3341549/94‑1 (MQ=60)

     GATCCTGTATATCTTCGGTGCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTG                                                                                            <  SRR4302547.4399263/94‑1 (MQ=60)

      ATCCTGTATATCTTCGGTGCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGG                                                                                           >  SRR4302547.1638743/1‑94 (MQ=60)

       TCCTGTATATCTTCGGTGCATTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGT                                                                                          <  SRR4302547.2800896/94‑1 (MQ=60)

        CCTGTATATCTTCGGTGCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTG                                                                                         >  SRR4302547.4486263/1‑94 (MQ=60)

         CTGTATATCTTCGGTGCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGC                                                                                        <  SRR4302547.6450272/94‑1 (MQ=60)

          TGTATATCTTCGGTGCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCG                                                                                       >  SRR4302547.5719715/1‑94 (MQ=60)

          TGTATATCTTCGGTGCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCG                                                                                       >  SRR4302547.586629/1‑94 (MQ=60)

          TGTATATCTTCGGTGCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCG                                                                                       <  SRR4302547.4242185/94‑1 (MQ=60)

            TATATCTTCGGTGCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCT                                                                                     <  SRR4302547.2839866/94‑1 (MQ=60)

            TATATCTTCGGTGCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCT                                                                                     >  SRR4302547.4147928/1‑94 (MQ=60)

            TATATCTTCGGTGCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCT                                                                                     <  SRR4302547.872236/94‑1 (MQ=60)

             ATATCTTCGGTGCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTG                                                                                    <  SRR4302547.5434384/94‑1 (MQ=60)

             ATATCTTCGGTGCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTG                                                                                    <  SRR4302547.1348208/94‑1 (MQ=60)

             ATATCTTCGGTGCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTG                                                                                    >  SRR4302547.2337800/1‑94 (MQ=60)

              TATCTTCGGTGCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGG                                                                                   <  SRR4302547.3000517/94‑1 (MQ=60)

              TATCTTCGGTGCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGG                                                                                   <  SRR4302547.1862776/94‑1 (MQ=60)

               ATCTTCGGTGCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGC                                                                                  >  SRR4302547.6606051/1‑94 (MQ=60)

               ATCTTCGGTGCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGC                                                                                  >  SRR4302547.5572759/1‑94 (MQ=60)

               ATCTTCGGTGCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGC                                                                                  <  SRR4302547.4667558/94‑1 (MQ=60)

               ATCTTCGGTGCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGC                                                                                  >  SRR4302547.5245552/1‑94 (MQ=60)

                  TTCGGTGCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTAC                                                                               <  SRR4302547.1449067/94‑1 (MQ=60)

                  TTCGGTGCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATAAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTAC                                                                               <  SRR4302547.4593956/94‑1 (MQ=60)

                   TCGGTGCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACG                                                                              <  SRR4302547.2153381/94‑1 (MQ=60)

                   TCGGTGCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACG                                                                              <  SRR4302547.525584/94‑1 (MQ=60)

                   TCGGTGCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACG                                                                              <  SRR4302547.4705190/94‑1 (MQ=60)

                   TCGGTGCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACG                                                                              >  SRR4302547.4222641/1‑94 (MQ=60)

                    CGGTGCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGC                                                                             >  SRR4302547.3776948/1‑94 (MQ=60)

                     GGTGCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCG                                                                            >  SRR4302547.1579302/1‑94 (MQ=60)

                     GGTGCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCG                                                                            >  SRR4302547.1718355/1‑94 (MQ=60)

                      GTGCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCAACAAGCCGCTGGTGCGCTGGCTACGCGG                                                                           <  SRR4302547.3724818/94‑1 (MQ=60)

                       TGCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGGT                                                                          >  SRR4302547.2738472/1‑94 (MQ=60)

                        GCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGGTC                                                                         >  SRR4302547.1840466/1‑94 (MQ=60)

                          CTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCAT                                                                      >  SRR4302547.6710192/1‑94 (MQ=60)

                          CTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCAT                                                                      >  SRR4302547.4211400/1‑94 (MQ=60)

                             tcgatTGTTTACCGGCGTGAAGATGGCGCTCGCCAATAAAGATGACGCAGGCATTGACGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTG                                                                   <  SRR4302547.3940513/89‑1 (MQ=58)

                             CCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTG                                                                   >  SRR4302547.1220325/1‑94 (MQ=60)

                             CCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTG                                                                   >  SRR4302547.499750/1‑94 (MQ=60)

                               TGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCG                                                                 >  SRR4302547.117077/1‑94 (MQ=60)

                               TGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCG                                                                 >  SRR4302547.2400191/1‑94 (MQ=60)

                                GCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGC                                                                >  SRR4302547.4661599/1‑94 (MQ=60)

                                 CTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCA                                                               >  SRR4302547.618343/1‑94 (MQ=60)

                                 CTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCA                                                               >  SRR4302547.5602128/1‑94 (MQ=60)

                                  TGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCAT                                                              >  SRR4302547.1507175/1‑94 (MQ=60)

                                  TGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCAT                                                              >  SRR4302547.559635/1‑94 (MQ=60)

                                  TGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCAT                                                              >  SRR4302547.2884009/1‑94 (MQ=60)

                                   GTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCAGGTGCGCTGGCTACGCGG‑TCATTTGCGCATG                                                             >  SRR4302547.2922683/1‑94 (MQ=60)

                                    TTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGA                                                            <  SRR4302547.2883616/94‑1 (MQ=60)

                                    TTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCAACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGA                                                            <  SRR4302547.6613281/94‑1 (MQ=60)

                                     TTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGAC                                                           >  SRR4302547.5238966/1‑94 (MQ=60)

                                     TTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGC‑GTTCATTTGCGCATGAC                                                           <  SRR4302547.792974/94‑1 (MQ=60)

                                      TCCCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACC                                                          <  SRR4302547.6672156/94‑1 (MQ=60)

                                      TACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACC                                                          <  SRR4302547.1305176/94‑1 (MQ=60)

                                      TACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACC                                                          <  SRR4302547.6503186/94‑1 (MQ=60)

                                       ACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCG                                                         <  SRR4302547.1970085/94‑1 (MQ=60)

                                        CCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGA                                                        <  SRR4302547.4699261/94‑1 (MQ=60)

                                         CGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGAC                                                       <  SRR4302547.5132993/94‑1 (MQ=60)

                                         CGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGAC                                                       <  SRR4302547.1016127/94‑1 (MQ=60)

                                          GGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACA                                                      <  SRR4302547.5062869/94‑1 (MQ=60)

                                          GGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACA                                                      >  SRR4302547.4016227/1‑94 (MQ=60)

                                          GGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACA                                                      >  SRR4302547.5955167/1‑94 (MQ=60)

                                           GCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACAC                                                     >  SRR4302547.5095045/1‑94 (MQ=60)

                                           GCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACAC                                                     <  SRR4302547.4074217/94‑1 (MQ=60)

                                           GCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACAC                                                     >  SRR4302547.855354/1‑94 (MQ=60)

                                            CGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACC                                                    <  SRR4302547.6496884/94‑1 (MQ=60)

                                            CGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACC                                                    >  SRR4302547.2201270/1‑94 (MQ=60)

                                            CGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACA                                                    >  SRR4302547.3274525/1‑94 (MQ=60)

                                             GTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCA                                                   >  SRR4302547.6195885/1‑94 (MQ=60)

                                             GTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCA                                                   <  SRR4302547.6361929/94‑1 (MQ=60)

                                              TGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCAT                                                  >  SRR4302547.4766723/1‑94 (MQ=60)

                                              TGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCAT                                                  <  SRR4302547.2501073/94‑1 (MQ=60)

                                               GAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATC                                                 <  SRR4302547.1616102/94‑1 (MQ=60)

                                                AAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCG                                                <  SRR4302547.1141545/94‑1 (MQ=60)

                                                AAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCG                                                <  SRR4302547.3726211/94‑1 (MQ=60)

                                                AAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCG                                                <  SRR4302547.308812/94‑1 (MQ=60)

                                                AAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCG                                                <  SRR4302547.3533580/94‑1 (MQ=60)

                                                AAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCG                                                <  SRR4302547.3243746/94‑1 (MQ=60)

                                                 AGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGA                                               >  SRR4302547.2614524/1‑94 (MQ=60)

                                                  aacgcgcgaggcccataaaaatgaatcacgacttggctacaagcCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGAC                                              <  SRR4302547.822813/50‑1 (MQ=60)

                                                  GATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGAC                                              <  SRR4302547.4251499/94‑1 (MQ=60)

                                                   ATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACA                                             >  SRR4302547.2404762/1‑94 (MQ=60)

                                                     GGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAAC                                           <  SRR4302547.4745371/94‑1 (MQ=60)

                                                     GGCGCGCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAAC                                           <  SRR4302547.2679412/94‑1 (MQ=60)

                                                      GCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACG                                          <  SRR4302547.2580042/94‑1 (MQ=60)

                                                       CGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGA                                         >  SRR4302547.5644960/1‑94 (MQ=60)

                                                        GCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAG                                        <  SRR4302547.270650/94‑1 (MQ=60)

                                                        GCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAG                                        <  SRR4302547.2625341/94‑1 (MQ=60)

                                                        GCCCGCCCCTGAAGATGAACCAGGCCTTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGGCACCATCGACAACGAG                                        <  SRR4302547.5510453/94‑1 (MQ=60)

                                                         CTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGC                                       >  SRR4302547.2746985/1‑94 (MQ=60)

                                                         CTCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGACC                                       >  SRR4302547.6237980/1‑94 (MQ=60)

                                                          TCGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCA                                      >  SRR4302547.1465915/1‑94 (MQ=60)

                                                           CGCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCAT                                     <  SRR4302547.6432986/94‑1 (MQ=60)

                                                            GCCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATT                                    >  SRR4302547.2902685/1‑94 (MQ=60)

                                                             ccaaggaagatgagccggacatcggcgtcaagcCGCTGGTGCGCTGGCTACGCTG‑TCATTTGCGCATGACCGCCCCCATCGACAACGAGCATTT                                   <  SRR4302547.2631582/61‑1 (MQ=47)

                                                             CCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTT                                   <  SRR4302547.204812/94‑1 (MQ=60)

                                                             CCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTT                                   <  SRR4302547.53357/94‑1 (MQ=60)

                                                             CCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTT                                   >  SRR4302547.2970851/1‑94 (MQ=60)

                                                             CCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTT                                   >  SRR4302547.4956550/1‑94 (MQ=60)

                                                             CCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTT                                   >  SRR4302547.1231248/1‑94 (MQ=60)

                                                             CCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTT                                   >  SRR4302547.1482397/1‑94 (MQ=60)

                                                             CCCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTT                                   <  SRR4302547.4149959/94‑1 (MQ=60)

                                                              CCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTC                                  <  SRR4302547.1656257/94‑1 (MQ=60)

                                                              CCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTC                                  >  SRR4302547.2924377/1‑94 (MQ=60)

                                                              CCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTC                                  >  SRR4302547.6563823/1‑94 (MQ=60)

                                                              CCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTC                                  >  SRR4302547.1063583/1‑94 (MQ=60)

                                                              CCATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAAAGAGCATTTC                                  >  SRR4302547.3537/1‑94 (MQ=60)

                                                               CATGACGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCT                                 <  SRR4302547.2292270/94‑1 (MQ=60)

                                                               CATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCT                                 >  SRR4302547.2051265/1‑94 (MQ=60)

                                                                ATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTT                                >  SRR4302547.6138486/1‑94 (MQ=60)

                                                                ATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTT                                >  SRR4302547.6654974/1‑94 (MQ=60)

                                                                ATGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTT                                <  SRR4302547.279653/94‑1 (MQ=60)

                                                                 TGAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTT                               >  SRR4302547.2060642/1‑94 (MQ=60)

                                                                 TGAAGATGAACCAGCATTTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTT                               <  SRR4302547.3714458/94‑1 (MQ=60)

                                                                  GAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTG                              >  SRR4302547.3858190/1‑94 (MQ=60)

                                                                  GAAGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTG                              <  SRR4302547.2060300/94‑1 (MQ=60)

                                                                   AAGATAAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGT                             <  SRR4302547.5746599/94‑1 (MQ=60)

                                                                    AGATGTATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTG                            >  SRR4302547.3463496/1‑94 (MQ=60)

                                                                    AGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTG                            >  SRR4302547.2209215/1‑94 (MQ=60)

                                                                    AGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTG                            >  SRR4302547.1592709/1‑94 (MQ=60)

                                                                    AGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTG                            >  SRR4302547.4095804/1‑94 (MQ=60)

                                                                    AGATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACAAGCCTTTCTTTGTG                            >  SRR4302547.4684597/1‑94 (MQ=60)

                                                                     GATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGC                           <  SRR4302547.5654799/94‑1 (MQ=60)

                                                                     GATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGC                           >  SRR4302547.2255463/1‑94 (MQ=60)

                                                                      ATGAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCG                          >  SRR4302547.1854281/1‑94 (MQ=60)

                                                                       aaAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGT                         <  SRR4302547.2533161/92‑1 (MQ=60)

                                                                        GAATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTA                        >  SRR4302547.3999833/1‑94 (MQ=60)

                                                                         AATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAA                       >  SRR4302547.5610069/1‑94 (MQ=60)

                                                                         AATAAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAA                       >  SRR4302547.6383578/1‑94 (MQ=60)

                                                                          ATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAG                      >  SRR4302547.6189339/1‑94 (MQ=60)

                                                                          ATCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAG                      <  SRR4302547.3067431/94‑1 (MQ=60)

                                                                           TCAGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGA                     >  SRR4302547.982338/1‑94 (MQ=60)

                                                                             gggatTTGGCGACAAGCCGCTGGTGCGCTGGCTCCGCGG‑TCATTTGCGCATGACCGACTCCATCGACAACGAGCATTTCTTTGTGCGTAAGAAT                   <  SRR4302547.6714552/89‑1 (MQ=60)

                                                                             AGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAAT                   <  SRR4302547.2022305/94‑1 (MQ=60)

                                                                             AGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAAT                   <  SRR4302547.613750/94‑1 (MQ=60)

                                                                             AGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAAT                   >  SRR4302547.4968734/1‑94 (MQ=60)

                                                                             AGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAAT                   >  SRR4302547.2059971/1‑94 (MQ=60)

                                                                             AGGCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAAT                   >  SRR4302547.4350262/1‑94 (MQ=60)

                                                                               GCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGG                 <  SRR4302547.2996141/94‑1 (MQ=60)

                                                                               GCATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGG                 <  SRR4302547.3916202/94‑1 (MQ=60)

                                                                                CATTGGGGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGGA                <  SRR4302547.4999691/94‑1 (MQ=60)

                                                                                CATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGGA                <  SRR4302547.3455458/94‑1 (MQ=60)

                                                                                CATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGGA                >  SRR4302547.6750193/1‑94 (MQ=60)

                                                                                CATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGGA                >  SRR4302547.148669/1‑94 (MQ=60)

                                                                                 tgttgtggcaagcCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACCCCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGGAT               <  SRR4302547.259628/81‑1 (MQ=60)

                                                                                 ATTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGGAT               >  SRR4302547.6296666/1‑94 (MQ=60)

                                                                                  TTGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGGATT              <  SRR4302547.3889557/94‑1 (MQ=60)

                                                                                  TGGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGGATT              <  SRR4302547.4222051/94‑1 (MQ=60)

                                                                                   TGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGGATTG             <  SRR4302547.882611/94‑1 (MQ=60)

                                                                                   TGGCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGGATTG             <  SRR4302547.6751878/94‑1 (MQ=60)

                                                                                     GCGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGGATTGCT           <  SRR4302547.2075389/94‑1 (MQ=60)

                                                                                      gaacaagcCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGGATTGCTG          <  SRR4302547.2855047/86‑1 (MQ=60)

                                                                                      cgaaaagcCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGGATTGCTA          <  SRR4302547.1914178/86‑1 (MQ=60)

                                                                                      CGACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGGATTGCTG          >  SRR4302547.5958772/1‑94 (MQ=60)

                                                                                       GACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATTACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGGCTTTCTGT         >  SRR4302547.1032171/1‑94 (MQ=60)

                                                                                       GACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGGATTGCTGT         <  SRR4302547.6051356/94‑1 (MQ=60)

                                                                                        ACAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGGATTGCTGTA        <  SRR4302547.2330988/94‑1 (MQ=60)

                                                                                         CAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGGATTGCTGTAC       >  SRR4302547.581422/1‑94 (MQ=60)

                                                                                         CAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGGATTGCTGTAC       >  SRR4302547.2660846/1‑94 (MQ=60)

                                                                                         CAAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGGATTGCTGTAC       <  SRR4302547.3884373/94‑1 (MQ=60)

                                                                                          AAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGGATTGCTGTACG      >  SRR4302547.6067367/1‑94 (MQ=60)

                                                                                          AAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGGATTGCTGTACG      >  SRR4302547.1997003/1‑94 (MQ=60)

                                                                                          AAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGGATTGCTGTACG      <  SRR4302547.2718732/94‑1 (MQ=60)

                                                                                          AAGCCGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGGATTGCTGTACG      <  SRR4302547.4495954/94‑1 (MQ=60)

                                                                                            C‑CGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGGATTGCTGTACGCCA   <  SRR4302547.6573407/94‑1 (MQ=60)

                                                                                              CGCTGGTGCGCTGGCTACGCGG‑TCATTTGCGCATGACCGACACCATAGACAACGCGCATTTCTTTGTGCGTCAGAATGGATTGCTGTTTGCCAC  >  SRR4302547.70808/1‑94 (MQ=60)

GACTGGATCCTGTATATCTTCGGTGCCTTCCTGCTGTTTACCGGCGTGAAGATGGCGCTCGCCCATGAAGATGAATCAGGCATTGGCGACAAG‑CGCTGGTGCGCTGGCTACGCGGTTCATTTGCGCATGACCGACACCATCGACAACGAGCATTTCTTTGTGCGTAAGAATGGATTGCTGTACGCCAC  >  NC_000913/3236642‑3236829

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 0 ≤` `ATCG/ATCG` `< 2 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`