Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
593 |
264.2 |
13311096 |
97.8% |
13018251 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,718,305 |
T→C |
intergenic (‑76/‑4) |
yiaZ ← / → yi5A |
putative membrane permeability altering protein/IS150 hypothetical protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,718,305 | 0 | T | C | 84.2%
| 483.5
/ 84.7
| 196 | intergenic (‑76/‑4) | yiaZ/yi5A | putative membrane permeability altering protein/IS150 hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base T (16/15); new base C (77/88); total (93/103) |
| Fisher's exact test for biased strand distribution p-value = 6.96e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 4.05e-01 |
Only 100 of 203 total aligned reads displayed.
ATATTTCTGCGGCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCTTTTGAAAAGCGCCTTGAAGTCGTGAATCACTACTTCACAACTGATGATGGTTACAGGATCATCTC > NC_000913/3718215‑3718394
|
atatTTCTGCGGCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCCaa > 2:2376361/1‑93 (MQ=255)
tatTTCTGCGGCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAat > 2:549325/1‑93 (MQ=255)
atTTCTGCGGCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCCAata > 1:436055/1‑93 (MQ=255)
atTTCTGCGGCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCCAata > 1:2507021/1‑93 (MQ=255)
tttCTGCGGCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCCAatat > 1:3633408/1‑93 (MQ=255)
ttCTGCGGCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCCAATATg < 2:2639279/93‑1 (MQ=255)
tCTGCGGCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCCAATATGt > 2:2110345/1‑93 (MQ=255)
tCTGCGGCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCCAATATGt < 1:2662274/93‑1 (MQ=255)
cTGCGGCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCCAATATGTc < 1:2403051/93‑1 (MQ=255)
cTGCGGCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCCAATATGTc < 2:5423842/93‑1 (MQ=255)
tGCGGCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCCAATATGTCa > 1:5252978/1‑93 (MQ=255)
tGCGGCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCCAATATGTCa > 2:4409026/1‑93 (MQ=255)
gCGGCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCCAATATGTCaa > 1:335907/1‑93 (MQ=255)
gCGGCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCCAATATGTCaa > 2:3452114/1‑93 (MQ=255)
gCGGCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCCAATATGTCaa > 2:5766571/1‑93 (MQ=255)
cGGCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCCAATATGTCaaa < 1:1256887/93‑1 (MQ=255)
cGGCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCCAATATGTCaaa < 2:6102223/93‑1 (MQ=255)
cGGCATTCCAAGCCTCCTGTGTTGATTTCCAACGAGTATGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCaaa < 1:3597400/93‑1 (MQ=255)
ggCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCCAATATGTCAAAg < 1:2226061/93‑1 (MQ=255)
gCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCCAATATGTCAAAGc > 2:840837/1‑93 (MQ=255)
cATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCCAATATGTCAAAGcc < 2:3531379/93‑1 (MQ=255)
ttCCCAGCCTCCTGTGTTGATTTCCAACGAGTATGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCCAATATGTCAAAGCCaa > 2:1225428/1‑93 (MQ=255)
tCCCAGCCTCCTGTGTTGATTTCCAACGAGTATGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCCAATATGTCAAAGCCaaa < 1:207557/93‑1 (MQ=255)
cccAGCCTCCTGTGTTGATTTCCAACGAGTATGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCCAATATGTCAAAGCCaaaa > 1:1899650/1‑93 (MQ=255)
ccAGCCTCCTGTGTTGATTTCCAACGAGTATGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCCAATATGTCAAAGCCAAAAt > 2:5855223/1‑93 (MQ=255)
cAGCCTCCTGTGTTGATTTCCAACGAGTATGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATa > 2:5950639/1‑93 (MQ=255)
cAGCCTCCTGTGTTGATTTCCAACGAGTATGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATa > 1:3468473/1‑93 (MQ=255)
cAGCCTCCTGTGTTGATTTCCAACGAGTATGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCCAATATGTCAAAGCCAAAATa > 1:1462755/1‑93 (MQ=255)
aGCCTCCTGTGTTGATTTCCAACGAGTATGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCCAATATGTCAAAGCCAAAATAc > 2:4641958/1‑93 (MQ=255)
aGCCTCCTGTGTTGATTTCCAACGAGTATGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCCAATATGTCAAAGCCAAAATAc > 2:4274064/1‑93 (MQ=255)
gCCTCCTGTGTTGATTTCCAACGAGTATGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCCAATATGTCAAAGCCAAAATAcc < 2:244458/93‑1 (MQ=255)
gCCTCCTGTGTTGATTTCCAACGAGTATGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCCAATATGTCAAAGCCAAAATAcc < 1:6199312/93‑1 (MQ=255)
gCCTCCTGAGTTGATTTCCAACGAGTATGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCCAATATGTCAAAGCCAAAATAcc > 1:6502536/1‑93 (MQ=255)
cctcctGTGTTGATTTCCAACGAGTATGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCCAATATGTCAAAGCCAAAATAccc < 1:3277568/93‑1 (MQ=255)
ctcctGTGTTGATTTCCAACGAGTATGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCCAATATGTCAAAGCCAAAATACCCt > 2:877060/1‑93 (MQ=255)
ctcctGTGTTGATTTCCAACGAGTATGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCCAATATGTCAAAGCCAAAATACCCt > 1:3778250/1‑93 (MQ=255)
ctcctGTGTTGATTTCCAACGAGTATGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCCAATATGTCAAAGCCAAAATACCCt < 1:2306318/93‑1 (MQ=255)
tcctGTGTTGATTTCCAACGAGTATGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCCAATATGTCAAAGCCAAAATACCCtt > 1:5026623/1‑93 (MQ=255)
tcctGTGTTGATTTCCAACGAGTATGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCCAATATGTCAAAGCCAAAATACCCtt < 2:2855479/93‑1 (MQ=255)
tcctGTGTTGATTTCCAACGAGTATGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCCAATATGTCAAAGCCAAAATACCCtt > 1:756966/1‑93 (MQ=255)
ctGTGTTGATTTCCAACGAGTATGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCCAATATGTCAAAGCCAAAATACCCtttt > 1:4126210/1‑93 (MQ=255)
ctGTGTTGATTTCCAACGAGTATGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCCAATATGTCAAAGCCAAAATACCCtttt > 1:3531080/1‑93 (MQ=255)
ctGTGTTGATTTCCAAAGAGTATGTACTGCACCCATTTGGTTGGACGATGAAATGGAATAGCCCCCAATATGTCAAAGCCAAAATACCCtttt < 2:4838872/93‑1 (MQ=255)
tgtgTTGATTTCCAACGAGTATGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCTTTTg > 2:5002554/1‑93 (MQ=255)
cgtgtTGATTTCCAACGAGTATGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCTTTTg < 2:4314904/92‑1 (MQ=255)
gtgtTGATTTCCAACGAGTATGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCTTTTGa > 1:5676826/1‑93 (MQ=255)
gtTGATTTCCAACGAGTATGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCTTTTGaaa > 1:5071432/1‑93 (MQ=255)
ttGATTTCCAACGAGTATGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCCAATATGTCAAAGCCAAAATACCCTTTTGaaaa > 2:4581855/1‑93 (MQ=255)
ttGATTTCCAACGAGTATGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCCAATATGTCAAAGCCAAAATACCCTTTTGaaaa > 1:3129963/1‑93 (MQ=255)
gATTTCCAACGAGTATGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCTTTTGAAAAgc > 1:5836976/1‑93 (MQ=255)
gATTTCCAACGAGTATGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCCAATATGTCAAAGCCAAAATACCCTTTTGAAAAgc < 1:5960777/93‑1 (MQ=255)
gATTTCCAACGAGTATGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCCAATATGTCAAAGCCAAAATACCCTTTTGAAAAgc > 1:5306360/1‑93 (MQ=255)
tttCCAACGAGTATGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCCAATATGTCAAAGCCAAAATACCCTTTTGAAAAgcgc > 1:291761/1‑93 (MQ=255)
ttCCAACGAGTATGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCCAATATGTCAAAGCCAAAATACCCTTTTGAAAAGCGcc < 2:1451205/93‑1 (MQ=255)
tCCAACGAGTATGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCCAATATGTCAAAGCCAAAATACCCTTTTGAAAAGCGCCt < 2:6634223/93‑1 (MQ=255)
aaCGAGTATGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCCAATATGTCAAAGCCAAAATACCCTTTTGAAAAGCGCCTTGa > 1:5992372/1‑93 (MQ=255)
aaCGAGTATGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCCAATATGTCAAAGCCAAAATACCCTTTTGAAAAGCGCCTTGa > 2:5977732/1‑93 (MQ=255)
gAGTATGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCCAATATGTCAAAGCCAAAATACCCTTTTGAAAAGCGCCTTGAAGt < 1:3157967/93‑1 (MQ=255)
gAGTATGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCCAATATGTCAAAGCCAAAATACCCTTTTGAAAAGCGCCTTGAAGt < 1:5389760/93‑1 (MQ=255)
tACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCCAATATGTCAAAGCCAAAATACCCTTTTGAAAAGCGCCTTGAAGTCGTGAAt < 1:3076749/93‑1 (MQ=255)
aCTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCTTTTGAAAAGCGCCTTGAAGTCGTGAATc < 1:1384915/93‑1 (MQ=255)
cTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCTTTTGAAAAGCGCCTTGAAGTCGTGAATCa < 2:3043489/93‑1 (MQ=255)
cTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCCAATATGTCAAAGCCAAAATACCCTTTTGAAAAGCGCCTTGAAGTCGTGAATCa < 2:1530958/93‑1 (MQ=255)
tGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCCAATATGTCAAAGCCAAAATACCCTTTTGAAAAGCGCCTTGAAGTCGTGAATCac < 2:4366025/93‑1 (MQ=255)
gCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCTTTTGAAAAGCGCCTTGAAGTCGTGAATCact < 1:4952618/93‑1 (MQ=255)
gCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCCAATATGTCAAAGCCAAAATACCCTTTTGAAAAGCGCCTTGAAGTCGTGAATCact < 2:5239142/93‑1 (MQ=255)
aCCCATTTTGTTGGACGATGAAATGGAATAGCCCCCAATATGTCAAAGCCAAAATACCCTTTTGAAAAGCGCCTTGAAGTCGTGAATCactac < 1:943582/93‑1 (MQ=255)
ccATTTTGTTGGACGATGAAATGGAATAGCCCCCAATATGTCAAAGCCAAAATACCCTTTTGAAAAGCGCCTTGAAGTCGTGAATCACTACtt < 1:4332632/93‑1 (MQ=255)
ccATTTTGTTGGACGATGAAATGGAATAGCCCCCAATATGTCAAAGCCAAAATACCCTTTTGAAAAGCGCCTTGAAGTCGTGAATCACTACtt > 1:853247/1‑93 (MQ=255)
ccATTTTGTTGGACGATGAAATGGAATAGCCCCCAATATGTCAAAGCCAAAATACCCTTTTGAAAAGCGCCTTGAAGTCGTGAATCACTACtt < 1:641584/93‑1 (MQ=255)
cATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCTTTTGAAAAGCGCCTTGAAGTCGTGAATCACTACTTc > 1:1004365/1‑93 (MQ=255)
cATTTTGTTGGACGATGAAATGGAATAGCCCCCAATATGTCAAAGCCAAAATACCCTTTTGAAAAGCGCCTTGAAGTCGTGAATCACTACTTc > 1:6241719/1‑93 (MQ=255)
cATTTTGTTGGACGATGAAATGGAATAGCCCCCAATATGTCAAAGCCAAAATACCCTTTTGAAAAGCGCCTTGAAGTCGTGAATCACTACTTc < 2:3290220/93‑1 (MQ=255)
cATTTTGTTGGACGATGAAATGGAATAGCCCCCAATATGTCAAAGCCAAAATACCCTTTTGAAAAGCGCCTTGAAGTCGTGAATCACTACTTc < 2:2697014/93‑1 (MQ=255)
cATTTTGTTGGACGATGAAATGGAATAGCCCCCAATATGCCAAAGCCAAAATACCCTTTTGAAAAGCGCCTTGAAGTCGTGAATCACTACTTc > 2:4790848/1‑93 (MQ=255)
aTTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCTTTTGAAAAGCGCCTTGAAGTCGTGAATCACTACTTca > 1:4611329/1‑93 (MQ=255)
aTTTTGTTGGACGATGAAATGGAATAGCCCCCAATATGTCAAAGCCAAAATACCCTTTTGAAAAGCGCCTTGAAGTCGTGAATCACTACTTca < 2:3758040/93‑1 (MQ=255)
tttGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATCCCCTTTTGAAAAGCGCCTTGAAGTCGTGAATCACTACTTcaca < 2:4092300/93‑1 (MQ=255)
tttGTTGGACGATGAAATGGAATAGCCCCCAATATGTCAAAGCCAAAATTCCCTTTTGAAAAGCGCCTTGAAGTCGTGAATCACTACTTcaca < 2:2953886/93‑1 (MQ=255)
ttgttgGACGATGAAATGGAATAGCCCCCAATATGTCAAAGCCAAAATACCCTTTTGAAAAGCGCCTTGAAGTCGTGAATCACTACTTCACaa > 1:4861313/1‑93 (MQ=255)
gttgGACGATGAAATGGAATAGCCCCCAATATGTCAAAGCCAAAATACCCTTTTGAAAAGCGCCTTGAAGTCGTGAATCACTACTTCACAACt > 1:5741067/1‑93 (MQ=255)
tgGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCTTTTGAAAAGCGCCTTGAAGTCGTGAATCACTACTTCACAACtga < 2:4126598/93‑1 (MQ=255)
tgGACGATGAAATGGAATAGCCCCCAATATGTCAAAGCCAAAATACCCTTTTGAAAAGCGCCTTGAAGTCGTGAATCACTACTTCACAACtga > 2:646716/1‑93 (MQ=255)
tgGACGATGAAATGGAATAGCCCCCAATATGTCAAAGCCAAAATACCCTTTTGAAAAGCGCCTTGAAGTCGTGAATCACTACTTCACAACtga < 1:388480/93‑1 (MQ=255)
gATGAAATGGAATAGCCCCCAATATGTCAAAGCCAAAATACCCTTTTGAAAAGCGCCTTGAAGTCGTGAATCACTACTTCACAACTGatgatg < 2:3901411/93‑1 (MQ=255)
gATGAAATGGAATAGCCCCCAATATGTCAAAGCCAAAATACCCTTTTGAAAAGCGCCTTGAAGTCGTGAATCACTACTTCACAACTGatgatg > 2:1976779/1‑93 (MQ=255)
gATGAAATGGAATAGCCCCCAATATGTCAAAGCCAAAATACCCTTTTGAAAAGCGCCTTGAAGTCGTGAATCACTACTTCACAACTGatgatg < 2:3869561/93‑1 (MQ=255)
aaaTGGAATAGCCCCCAATATGTCAAAGCCAAAATACCCTTTTGAAAAGCGCCTTGAAGTCGTGAATCACTACTTCACAACTGATGATGGTTa > 1:3676824/1‑93 (MQ=255)
aaTGGAATAGCCCCCAATATGTCAAAGCCAAAATACCCTTTTGAAAAGCGCCTTGAAGTCGTGAATCACTACTTCACAACTGATGATGGTTAc > 2:5112847/1‑93 (MQ=255)
aTGGAATAGCCCCCAATATGTCAAAGCCAAAATACCCTTTTGAAAAGCGCCTTGAAGTCGTGAATCACTACTTCACAACTGATGATGGTTACa > 1:2465265/1‑93 (MQ=255)
aTGGAATAGCCCCCAATATGTCAAAGCCAAAACACCCTTTTGAAAAGCGCCTTGAAGTCGTGAATCACTACTTCACAACTGATGATGGTTACa < 2:714520/93‑1 (MQ=255)
tGGAATAGCCCCCAATATGTCAAAGCCAAAATACCCTTTTGAAAAGCGCCTTGAAGTCGTGAATCACTACTTCACAACTGATGATGGTTACAg < 1:6311967/93‑1 (MQ=255)
tGGAATAGCCCCCAATATGTCAAAGCCAAAATACCCTTTTGAAAAGCGCCTTGAAGTCGTGAATCACTACTTCACAACTGATGATGGTTACAg > 1:3858922/1‑93 (MQ=255)
ggAATAGCCCCCAATATGTCAAAGCCAAAATACCCTTTTGAAAAGCGCCTTGAAGTCGTGAATCACTACTTCACAACTGATGATGGTTACAgg < 1:5510851/93‑1 (MQ=255)
aaTAGCCCCTAATATGTCAAAGCCAAAATACCCTTTTGAAAAGCGCCTTGAAGTCGTGAATCACTACTTCACAACTGATGATGGTTACAGGat > 1:4007486/1‑93 (MQ=255)
aaTAGCCCCCAATATGTCAAAGCCAAAATACCCTTTTGAAAAGCGCCTTGAAGTCGTGAATCACTACTTCACAACTGATGATGGTTACAGGat < 2:4326293/93‑1 (MQ=255)
aaTAGCCCCCAATATGTCAAAGCCAAAATACCCTTTTGAAAAGCGCCTTGAAGTCGTGAATCACTACTTCACAACTGATGATGGTTACAGGat > 2:813416/1‑93 (MQ=255)
tAGCCCCCAATATGTCAAAGCCAAAATACCCTTTTGAAAAGCGCCTTGAAGTCGTGAATCACTACTTCACAACTGATGATGGTTACAGGatca < 1:4322032/93‑1 (MQ=255)
ccccCAATATGTCAAAGCCAAAATACCCTTTTGAAAAGCGCCTTGAAGTCGTGAATCACTACTTCACAACTGATGATGGTTACAGGATCAtct < 1:4742104/93‑1 (MQ=255)
ccccAATATGTCAAAGCCAAAATACCCTTTTGAAAAGCGCCTTGAAGTCGTGAATCACTACTTCACAACTGATGATGGTTACAGGATCAtctc < 1:4665686/93‑1 (MQ=255)
|
ATATTTCTGCGGCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCTTTTGAAAAGCGCCTTGAAGTCGTGAATCACTACTTCACAACTGATGATGGTTACAGGATCATCTC > NC_000913/3718215‑3718394
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
TCTATATTTCTGCGGCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCTTTTGAAAAGCGCCTTGAAGTCGTGAATCACTACTTCACAACTGATGATGGTTACAGGATCATCTCGGC > NC_000913/3718212‑3718397
|
TCTATATTTCTGCGGCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCC > SRR4302547.6178224/1‑94 (MQ=60)
TCTATATTTCTGCGGCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCC < SRR4302547.4174383/94‑1 (MQ=60)
CTATATTTCTGCGGCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCCA > SRR4302547.4846691/1‑94 (MQ=60)
CTATATTTCTGCGGCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCCA > SRR4302547.3781958/1‑94 (MQ=60)
TATATTTCTGCGGCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCCAA < SRR4302547.1472817/94‑1 (MQ=60)
ATATTTCTGCGGCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCCAAT < SRR4302547.3959478/94‑1 (MQ=60)
ATATTTCTGCGGCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCCAAT < SRR4302547.3167820/94‑1 (MQ=60)
TATTTCTGCGGCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCCAATA < SRR4302547.6785777/94‑1 (MQ=60)
TATTTCTGCGGCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCCAATA > SRR4302547.2557696/1‑94 (MQ=60)
TATTTCTGCGGCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCCAATA > SRR4302547.444149/1‑94 (MQ=60)
ATTTCTGCGGCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCCAATAT < SRR4302547.2071072/94‑1 (MQ=60)
ATTTCTGCGGCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCCAATAT > SRR4302547.3707524/1‑94 (MQ=60)
TCTGCGGCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCCAATATGTC < SRR4302547.2715767/94‑1 (MQ=60)
TCTGCGGCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCCAATATGTC < SRR4302547.2210335/94‑1 (MQ=60)
CTGCGGCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCCAATATGTCA > SRR4302547.5361140/1‑94 (MQ=60)
CTGCGGCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCCAATATGTCA < SRR4302547.2512039/94‑1 (MQ=60)
CTGCGGCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCCAATATGTCA < SRR4302547.2451718/94‑1 (MQ=60)
TGCGGCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAA > SRR4302547.3892263/1‑94 (MQ=60)
TGCGGCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCCAATATGTCAA > SRR4302547.342158/1‑94 (MQ=60)
CGGCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCCAATATGTCAAAG < SRR4302547.4858784/94‑1 (MQ=60)
CGGCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCCAATATGTCAAAG < SRR4302547.1282228/94‑1 (MQ=60)
CGGCATTCCAAGCCTCCTGTGTTGATTTCCAACGAGTATGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAG < SRR4302547.3670765/94‑1 (MQ=60)
GGCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCCAATATGTCAAAGC < SRR4302547.2270920/94‑1 (MQ=60)
CATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCA < SRR4302547.4423513/94‑1 (MQ=60)
ATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCCAATATGTCAAAGCCAA > SRR4302547.6253415/1‑94 (MQ=60)
TCCCAGCCTCCTGTGTTGATTTCCAACGAGTATGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCCAATATGTCAAAGCCAAAA < SRR4302547.211459/94‑1 (MQ=60)
TCCCAGCCTCCTGTGTTGATTTCCAACGAGTATGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCCAATATGTCAAAGCCAAAA > SRR4302547.1937235/1‑94 (MQ=60)
CCCAGCCTCCTGTGTTGATTTCCAACGAGTATGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAAT < SRR4302547.5376588/94‑1 (MQ=60)
CCCAGCCTCCTGTGTTGATTTCCAACGAGTATGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCCAATATGTCAAAGCCAAAAT > SRR4302547.5160343/1‑94 (MQ=60)
CCCAGCCTCCTGTGTTGATTTCCAACGAGTATGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCCAATATGTCAAAGCCAAAAT > SRR4302547.6500687/1‑94 (MQ=60)
CCAGCCTCCTGTGTTGATTTCCAACGAGTATGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATA > SRR4302547.3539200/1‑94 (MQ=60)
CCAGCCTCCTGTGTTGATTTCCAACGAGTATGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCCAATATGTCAAAGCCAAAATA > SRR4302547.1491983/1‑94 (MQ=60)
AGCCTCCTGAGTTGATTTCCAACGAGTATGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCCAATATGTCAAAGCCAAAATACC > SRR4302547.6637886/1‑94 (MQ=60)
GCCTCCTGTGTTGATTTCCAACGAGTATGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCCAATATGTCAAAGCCAAAATACCC < SRR4302547.6328021/94‑1 (MQ=60)
CCTCCTGTGTTGATTTCCAACGAGTATGTACTGCACCCATTTTGTTGGACGATGAAATGGCATAGCCCCCAATATGTCAAAGCCAAAATACCCT > SRR4302547.3579712/1‑94 (MQ=60)
CCTCCTGTGTTGATTTCCAACGAGTATGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCCAATATGTCAAAGCCAAAATACCCT > SRR4302547.3855299/1‑94 (MQ=60)
CCTCCTGTGTTGATTTCCAACGAGTATGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCCAATATGTCAAAGCCAAAATACCCT < SRR4302547.3343272/94‑1 (MQ=60)
CTCCTGTGTTGATTTCCAACGAGTATGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCCAATATGTCAAAGCCAAAATACCCTT < SRR4302547.2353067/94‑1 (MQ=60)
CTCCTGTGTTGATTTCCAACGAGTATGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCCAATATGTCAAAGCCAAAATACCCTT > SRR4302547.771237/1‑94 (MQ=60)
CTCCTGTGTTGATTTCCAACGAGTATGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCCAATATGTCAAAGCCAAAATACCCTT > SRR4302547.5130482/1‑94 (MQ=60)
CTCCTGTGTTGATTTCCAACGAGTATGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCCAATATGTCAAAGCCAAAATACCCTT > SRR4302547.5891198/1‑94 (MQ=60)
CTCCTGTGTTGATTTCCAACGAGTATGTACTGCACCCATTTTGTTGGACGATCAAATGGAATAGCCCCCAATATGTCAAAGCCAAAATACCCTT < SRR4302547.5517057/94‑1 (MQ=60)
CCTGTGTTGATTTCCAACGAGTATGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCCAATATGTCAAAGCCAAAATACCCTTTT > SRR4302547.3603172/1‑94 (MQ=60)
CCTGTGTTGATTTCCAACGAGTATGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCCAATATGTCAAAGCCAAAATACCCTTTT > SRR4302547.4210130/1‑94 (MQ=60)
CCTGTGTTGATTTCCAACGAGTATGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCCAATATGTCAAAGCCAAAATACCCTTTT > SRR4302547.4745926/1‑94 (MQ=60)
TGTGTTGATTTCCAACGAGTATGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCTTTTGA > SRR4302547.5794041/1‑94 (MQ=60)
TGTGTTGATTTCCAACGAGTATGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCCAATATGTCAAAGCCAAAATACCCTTTTGA > SRR4302547.3524354/1‑94 (MQ=60)
TGTTGATTTCCAACGAGTATGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCTTTTGAAA > SRR4302547.5176064/1‑94 (MQ=60)
GTTGATTTCCAACGAGTATGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCCAATATGTCAAAGCCAAAATACCCTTTTGAAAA > SRR4302547.3192080/1‑94 (MQ=60)
TGATTTCCAACGAGTATGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCTTTTGAAAAGC > SRR4302547.5957752/1‑94 (MQ=60)
TGATTTCCAACGAGTATGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCCAATATGTCAAAGCCAAAATACCCTTTTGAAAAGC > SRR4302547.5415816/1‑94 (MQ=60)
GATTTCCAACGAGTATGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCCAATATGTCAAAGCCAAAATACCCTTTTGAAAAGCG < SRR4302547.6084384/94‑1 (MQ=60)
GATTTCCAACGAGTATGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCCAATATGTCAAAGCCAAAATACCCTTTTGAAAAGCG < SRR4302547.4450389/94‑1 (MQ=60)
ATTTCCAACGAGTATGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCCAATATGTCAAAGCCAAAATACCCTTTTGAAAAGCGC > SRR4302547.297174/1‑94 (MQ=60)
TTCCAACGAGTATGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCCAATATGTCAAAGCCAAAATACCCTTTTGAAAAGCGCCT < SRR4302547.4976466/94‑1 (MQ=60)
CAACGAGTATGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCTTTTGAAAAGCGCCTTGA < SRR4302547.811046/94‑1 (MQ=60)
CAACGAGTATGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCCAATATGTCAAAGCCAAAATACCCTTTTGAAAAGCGCCTTGA > SRR4302547.6116704/1‑94 (MQ=60)
AACGAGTATGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCCAATATGTCAAAGCCAAAATACCCTTTTGAAAAGCGCCTTGAA > SRR4302547.3656713/1‑94 (MQ=60)
GAGTATGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCCAATATGTCAAAGCCAAAATACCCTTTTGAAAAGCGCCTTGAAGTC < SRR4302547.5501064/94‑1 (MQ=60)
GAGTATGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCCAATATGTCAAAGCCAAAATACCCTTTTGAAAAGCGCCTTGAAGTC < SRR4302547.3220771/94‑1 (MQ=60)
GTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCCAATATGTCAAAGCCAAAATACCCTTTTGAAAAGCGCCTTGAAGTCGTGAAT < SRR4302547.5351580/94‑1 (MQ=60)
TACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCCAATATGTCAAAGCCAAAATACCCTTTTGAAAAGCGCCTTGAAGTCGTGAATC < SRR4302547.3137862/94‑1 (MQ=60)
ACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCTTTTGAAAAGCGCCTTGAAGTCGTGAATCA < SRR4302547.1412645/94‑1 (MQ=60)
ACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCCAATATGTCAAAGCCAAAATACACTTTTGAAAAGCGACTTGAAGTCGTGAATCA > SRR4302547.252932/1‑94 (MQ=60)
GCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCTTTTGAAAAGCGCCTTGAAGTCGTGAATCACTA < SRR4302547.5055153/94‑1 (MQ=60)
GCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCTTTTGAAAAGCGCCTTGAAGTCGTGAATCACTA < SRR4302547.3227876/94‑1 (MQ=60)
ACCCATTTTGTTGGACGATGAAATGGAATAGCCCCCAATATGTCAAAGCCAAAATACCCTTTTGAAAAGCGCCTTGAAGTCGTGAATCACTACT < SRR4302547.961869/94‑1 (MQ=60)
CCCATTTTGTTGGACGATGAAATGGAATAGCCCCCAATATGTCAAAGCCAAAATACCCTTTTGAAAAGCGCCTTGAAGTCGTGAATCACTACTT > SRR4302547.869540/1‑94 (MQ=60)
CCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCTTTTGAAAAGCGCCTTGAAGTCGTGAATCACTACTTC > SRR4302547.1023957/1‑94 (MQ=60)
CCATTTTGTTGGACGATGAAATGGAATAGCCCCCAATATGTCAAAGCCAAAATACCCTTTTGAAAAGCGCCTTGAAGTTGTGAATCACTACTTC < SRR4302547.4136054/94‑1 (MQ=60)
CCATTTTGTTGGACGATGAAATGGAATAGCCCCCAATATGTCAAAGCCAAAATACCCTTTTGAAAAGCGCCTTGAAGTCGTGAATCACTACTTC < SRR4302547.4421764/94‑1 (MQ=60)
CCATTTTGTTGGACGATGAAATGGAATAGCCCCCAATATGTCAAAGCCAAAATACCCTTTTGAAAAGCGCCTTGAAGTCGTGAATCACTACTTC > SRR4302547.1555883/1‑94 (MQ=60)
CCATTTTGTTGGACGATGAAATGGAATAGCCCCCAATATGTCAAAGCCAAAATACCCTTTTGAAAAGCGCCTTGAAGTCGTGAATCACTACTTC < SRR4302547.653419/94‑1 (MQ=60)
CCATTTTGTTGGACGATGAAATGGAATAGCCCCCAATATGTCAAAGCCAAAATACCCTTTTGAAAAGCGCCTTGAAGTCGTGAATCACTACTTC > SRR4302547.6371386/1‑94 (MQ=60)
CATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCTTTTGAAAAGCGCCTTGAAGTCGTGAATCACTACTTCA > SRR4302547.4706784/1‑94 (MQ=60)
CATTTTGTTGGACGATGAAATGGAATAGCCCCCAATATGTCAAAGCCAAAATACCCTTTTGAAAAGCGCCTTGAAGTCGTGAATCACTACTTCA < SRR4302547.6084643/94‑1 (MQ=60)
TTTTGTTGGACGATGAAATGGAATAGCCCCCAATATGTCAAAGCCAAAATACCCTTTTGAAAAGCGCCTTGAAGTCGTGAATCACTACTTCACA > SRR4302547.302327/1‑94 (MQ=60)
TTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCTTTTGAAAAGCGCCTTGAAGTCGTGAATCACTACTTCACAA > SRR4302547.6383034/1‑94 (MQ=60)
TTTGTTGGACGATGAAATGGAATAGCCCCCAATATGTCAAAGCCAAAATACCCTTTTGAAAAGCGCCTTGAAGTCGTGAATCACTACTTCACAA > SRR4302547.6066509/1‑94 (MQ=60)
TTTGTTGGACGATGAAATGGAATAGCCCCCAATATGTCAAAGCCAAAATACCCTTTTGAAAAGCGCCTTGAAGTCGTGAATCACTACTTCACAA > SRR4302547.4962050/1‑94 (MQ=60)
TTGTTGGACGATGAAATGGAATAGCCCCCAATATGTCAAAGCCAAAATACCCTTTTGAAAAGCGCCTTGAAGTCGTGAATCACTACTTCACAAC > SRR4302547.5849008/1‑94 (MQ=60)
TGTTGGACGATGAAATGGAATAGCCCCCAATATGTCAAAGCCAAAATACCCTTTTGAAAAGCGCCTTGAAGTCGTGAATCACTACTTCACAACT < SRR4302547.4418339/94‑1 (MQ=60)
TGTTGGACGATGAAATGGAATAGCCCCCAATATGTCAAAGCCAAAATACCCTTTTGAAAAGCGCCTTGAAGTCGTGAATCACTACTTCACAACT > SRR4302547.4008184/1‑94 (MQ=60)
TGTTGGACGATGAAATGGAATAGCCCCCAATATGTCAAAGCCAAAATACCCTTTTGAAAAGCGCCTTGAAGTCGTGAATCACTACTTCACAACT > SRR4302547.5859707/1‑94 (MQ=60)
TTGGACGATGAAATGGAATAGCCCCCAATATGTCAAAGCCAAAATACCCTTTTGAAAAGCGCCTTGAAGTCGTGAATCACTACTTCACAACTGA < SRR4302547.4786095/94‑1 (MQ=60)
TTGGACGATGAAATGGAATAGCCCCCAATATGTCAAAGCCAAAATACCCTTTTGAAAAGCGCCTTGAAGTCGTGAATCACTACTTCACAACTGA > SRR4302547.3356757/1‑94 (MQ=60)
TGGACGATGAAATGGAATAGCCCCCAATATGTCAAAGCCAAAATACCCTTTTGAAAAGCGCCTTGAAGTCGTGAATCACTACTTCACAACTGAT < SRR4302547.395684/94‑1 (MQ=60)
GGACGATGAAATGGAATAGCCCCCAATATGTCAAAGCCAAAATACCCTTTTGAAAAGCGCCTTGAAGTCGTGAATCACTACTTCACAACTGATG < SRR4302547.4375224/94‑1 (MQ=60)
GACGATGAAATGGAATAGCCCCCAATATGTCAAAGCCAAAATACCCTTTTGAAAAGCGCCTTGAAGTCGTGAATCACTACTTCACAACTGATGA < SRR4302547.2940190/94‑1 (MQ=60)
ACGATGAAATGGAATAGCCCCCAATATGTCAAAGCAAAAATACCCTTTTGAAAAGCGCCTTGAAGTCGTGAATCACTACTTCACAACTGATGAT < SRR4302547.3766187/94‑1 (MQ=60)
CGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCTTTTGAAAAGCGCCTTGAAGTCGTGAATCACTACTTCACAACTGATGATG > SRR4302547.228011/1‑94 (MQ=60)
CGATGAAATGGAATAGCCCCCAATATGTCAAAGCCAAAATACCCTTTTGAAAAGCGCCTTGAAGTCGTGAATCACTACTTCACAACTGATGATG > SRR4302547.139572/1‑94 (MQ=60)
CGATGAAATGGAATAGCCCCCAATATGTCAAAGCCAAAATACCCTTTTGAAAAGCGCCTTGAAGTCGTGAATCACTACTTCACAACTGATGATG < SRR4302547.2372982/94‑1 (MQ=60)
GATGAAATGGAATAGCCCCCAATATGTCAAAGCCAAAATACCCTTTTGAAAAGCGCCTTGAAGTCGTGAATCACTACTTCACAACTGATGATGG < SRR4302547.6352377/94‑1 (MQ=60)
GATGAAATGGAATAGCCCCCAATATGTCAAAGCCAAAATACCCTTTTGAAAAGCGCCTTGAAGTCGTGAATCACTACTTCACAACTGATGATGG > SRR4302547.2640423/1‑94 (MQ=60)
GAAATGGAATAGCCCCCAATATGTCAAAGCCAAAATACCCTTTTGAAAAGCGCCTTGAAGTCGTGAATCACTACTTCACAACTGATGATGGTTA > SRR4302547.3751842/1‑94 (MQ=60)
AAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCTTTTGAAAAGCGCCTTGAAGTCGTGAATCACTACTTCACAACTGATGATGGTTAC > SRR4302547.5445967/1‑94 (MQ=60)
AAATGGAATAGCCCCCAATATGTCAAAGCCAAAATACCCTTTTGAAAAGCGCCTTGAAGTCGTGAATCACTACTTCACAACTGATGATGGTTAC > SRR4302547.3685195/1‑94 (MQ=60)
AAATGGAATAGCCCCCAATATGTCAAAGCCAAAATACCCTTTTGAAAAGCGCCTTGAAGTCGTGAATCACTACTTCACAACTGATGATGGTTAC < SRR4302547.4897950/94‑1 (MQ=60)
AATGGAATAGCCCCCAATATGTCAAAGCCAAAATACCCTTTTGAAAAGCGCCTTGAAGTCGTGAATCACTACTTCACAACTGATGATGGTTACA > SRR4302547.2515090/1‑94 (MQ=60)
ATGGAATAGCCCCCAATATGTCAAAGCCAAAATACCCTTTTGAAAAGCGCCTTGAAGTCGTGAATCACTACTTCACAACTGATGATGGTTACAG < SRR4302547.954818/94‑1 (MQ=60)
ATGGAATAGCCCCCAATATGTCAAAGCCAAAATACCCTTTTGAAAAGCGCCTTGAAGTCGTGAATCACTACTTCACAACTGATGATGGTTACAG > SRR4302547.3937452/1‑94 (MQ=60)
TGGAATAGCCCCCAATATGTCAAAGCCAAAATACCCTTTTGAAAAGCGCCTTGAAGTCGTGAATCACTACTTCACAACTGATGATGGTTACAGG < SRR4302547.6443198/94‑1 (MQ=60)
GGAATAGCCCCCAATATGTCAAAGCCAAAATACCCTTTTGAAAAGCGCCTTGAAGTCGTGAATCACTACTTCACAACTGATGATGGTTACAGGA < SRR4302547.5624623/94‑1 (MQ=60)
GAATAGCCCCTAATATGTCAAAGCCAAAATACCCTTTTGAAAAGCGCCTTGAAGTCGTGAATCACTACTTCACAACTGATGATGGTTACAGGAT > SRR4302547.4088942/1‑94 (MQ=60)
AATAGCCCCCAATATGTCAAAGCCAAAATACCCTTTTGAAAAGCGCCTTGAAGTCGTGAATCACTACTTCACATCTGATGATGGTTACAGGATC < SRR4302547.6552410/94‑1 (MQ=60)
AATAGCCCCCAATATGTCAAAGCCAAAATACCCTTTTGAAAAGCGCCTTGAAGTCGTGAATCACTACTTCACAACTGATGATGGTTACAGGATC < SRR4302547.1487195/94‑1 (MQ=60)
TAGCCCCCAATATGTCAAAGCCAAAATACCCTTTTGAAAAGCGCCTTGAAGTCGTGAATCACTACTTCACAACTGATGATGGTTACAGGATCAT < SRR4302547.4411000/94‑1 (MQ=60)
TAGCCCCCAATATGTCAAAGCCAAAATACCCTTTTGAAAAGCGCCTTGAAGTCGTGAATCACTACTTCACAACTGATGATGGTTACAGGATCAT > SRR4302547.3209020/1‑94 (MQ=60)
AGCCCCCAATATGTCAAAGCCAAAATACCCTTTTGAAAAGCGCCTTGAAGTCGTGAATCACTACTTCACAACTGATGATGGTTACAGGATCATC < SRR4302547.506963/94‑1 (MQ=60)
CCCCCAATATGTCAAAGCCAAAATACCCTTTTGAAAAGCGCCTTGAAGTCGTGAATCACTACTTCACAACTGATGATGGTTACAGGATCATCTC < SRR4302547.4840377/94‑1 (MQ=60)
CCCCCAATATGTCAAAGCCAAAATACCCTTTTGAAAAGCGCCTTGAAGTCGTGAATCACTACTTCACAACTGATGATGGTTACAGGATCATCTC > SRR4302547.568613/1‑94 (MQ=60)
CCCCCAATATGTCAAAGCCAAAATACCCTTTTGAAAAGCGCCTTGAAGTCGTGAATCACTACTTCACAACTGATGATGGTTACAGGATCATCTC > SRR4302547.1263748/1‑94 (MQ=60)
CCCCAATATGTCAAAGCCAAAATACCCTTTTGAAAAGCGCCTTGAAGTCGTGAATCACTACTTCACAACTGATGATGGTTACAGGATCATCTCG < SRR4302547.3747953/94‑1 (MQ=60)
CCCCAATATGTCAAAGCCAAAATACCCTTTTGAAAAGCGCCTTGAAGTCGTGAATCACTACTTCACAACTGATGATGGTTACAGGATCATCTCG < SRR4302547.4762306/94‑1 (MQ=60)
CCCAATATGTCAAAGCCAAAATACCCTTTTGAAAAGCGCCTTGAAGTCGTGAATCACTACTTCACAACTGATGATGGTTACAGGATCATCTCGG > SRR4302547.213892/1‑94 (MQ=60)
CCCAATATGTCAAAGCCAAAATACCCTTTTGAAAAGCGCCTTGAAGTCGTGAATCACTACTTCACAACTGATGATGGTTACAGGATCATCTCGG > SRR4302547.3721929/1‑94 (MQ=60)
CCAATATGTCAAAGCCAAAATACCCTTTTGAAAAGCGCCTTGAAGTCGTGAATCACTACTTCACAACTGATGATGGTTACAGGATCATCTCGGC > SRR4302547.5676640/1‑94 (MQ=60)
|
TCTATATTTCTGCGGCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCTTTTGAAAAGCGCCTTGAAGTCGTGAATCACTACTTCACAACTGATGATGGTTACAGGATCATCTCGGC > NC_000913/3718212‑3718397
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
