Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
593 |
264.2 |
13311096 |
97.8% |
13018251 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,870,765 |
+G |
coding (476/1764 nt) |
dgoA ← |
2‑oxo‑3‑deoxygalactonate 6‑phosphate aldolase |
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,870,764 | 1 | . | G | 100.0%
| 1097.1
/ NA
| 298 | A159A (GCA→GCC) | dgoA | 2‑oxo‑3‑deoxygalactonate 6‑phosphate aldolase |
| Reads supporting (aligned to +/- strand): ref base . (0/0); new base G (143/155); total (143/155) |
Only 100 of 329 total aligned reads displayed.
GCGGTGCGCTCTACGGATTGCCCGGCGCGATAGAGATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCT‑GCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGACCAAAAGCCGATG > NC_000913/3870672‑3870851
|
gcgGTGCGCTCTACGGATTGCCCGGCGCGATAGAGATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCt < 2:2771564/93‑1 (MQ=255)
ccgGTGCGCTCTACGGATTGCCCGGCGCGATAGAGATCGCTGCCTAAGCCCGCCCCTGCATAACCTGCGTCTATCCACTGCGCCAGGTTTTCt < 1:5658490/92‑1 (MQ=255)
ccgGTGCGCTCTACGGATTGCCCGGCGCGATAGAGATCGCTGCCTAAGCCCGCCCCTCCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCt < 2:2269721/92‑1 (MQ=255)
cgGTGCGCTCTACGGATTGCCCGGCGCGATAGAGATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCT‑g < 1:5325057/93‑1 (MQ=255)
cgGTGCGCTCTACGGATTGCCCGGCGCGATAGAGATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCT‑g > 1:3109111/1‑93 (MQ=255)
cgGTGCGCTCTACGGATTGCCCGGCGCGATAGAGAGCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCT‑g < 2:3973690/93‑1 (MQ=255)
tGCGCTCTACGGATTGCCCGGCGCGATAGAGATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCT‑ggcg < 1:3776635/93‑4 (MQ=255)
gcgcTCTACGGATTGCCCGGCGCGATAGAGATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCT‑ggcgt < 1:3021839/93‑5 (MQ=255)
ctctACGGATTGCCCGGCGCGATAGAGATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCAc < 2:5933971/93‑1 (MQ=255)
tctACGGATTGCCCGGCGCGATAGAGATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCAcg > 2:3652755/1‑93 (MQ=255)
aCGGATTGCCCGGCGCGATAGAGATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCAcgccg > 1:3505161/1‑93 (MQ=255)
cGGATTGCCCGGCGCGATAGAGATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCAcgccgc < 1:4504636/93‑1 (MQ=255)
cGGATTGCCCGGCGCGATAGAGATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCAcgccgc > 2:203609/1‑93 (MQ=255)
ttGCCCGGCGCGATAGAGATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAAc > 2:4395521/1‑93 (MQ=255)
ttGCCCGGCGCGATAGAGATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGGTTTCTGGCGTGACGCCGCCCAc > 1:3854624/1‑93 (MQ=255)
gCCCGGCGCGATAGAGATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACgg < 1:2604337/93‑1 (MQ=255)
ccGGCGCGATAGAGATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCa < 2:5406951/93‑1 (MQ=255)
ggCGCGATAGAGATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCaaa > 2:667169/1‑93 (MQ=255)
gcgcGATAGAGATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAg < 2:6320352/93‑1 (MQ=255)
gcgATAGAGATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGAc < 2:6455984/93‑1 (MQ=255)
cgATAGAGATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACt < 2:2198920/93‑1 (MQ=255)
cgATAGAGATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACt < 2:6231337/93‑1 (MQ=255)
aTAGAGATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGc > 2:5077114/1‑93 (MQ=255)
aTAGAGATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGc > 2:3562313/1‑93 (MQ=255)
aTAGAGATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGc < 1:491656/93‑1 (MQ=255)
gagaTCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGAt < 1:2805330/93‑1 (MQ=255)
gagaTCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGAt > 1:4056598/1‑93 (MQ=255)
agaTCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATg > 2:4491215/1‑93 (MQ=255)
agaTCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATg < 2:5382539/93‑1 (MQ=255)
agaTCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATg > 1:4188782/1‑93 (MQ=255)
gaTCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGt < 2:1421733/93‑1 (MQ=255)
gaTCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGt > 1:6183119/1‑93 (MQ=255)
gaTCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGt > 2:437706/1‑93 (MQ=255)
gaTCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGt < 2:6379535/93‑1 (MQ=255)
gtgtcTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTAGCGCCGCCAACGGCAAAGACTGCGATGTc < 1:5068903/89‑1 (MQ=255)
aTCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTc < 2:5241299/93‑1 (MQ=255)
aTCGCGCCCGAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTc < 2:1352597/93‑1 (MQ=255)
tCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTcc < 2:4124454/93‑1 (MQ=255)
cTGCCTAGGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGAt < 2:6175515/93‑1 (MQ=255)
cTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGAt < 1:502757/93‑1 (MQ=255)
cTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGAt < 2:3900813/93‑1 (MQ=255)
cTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGAt < 1:5544886/93‑1 (MQ=255)
cTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGAt > 2:4671085/1‑93 (MQ=255)
tGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATg < 1:1134149/93‑1 (MQ=255)
ccTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGc > 1:5477138/1‑93 (MQ=255)
cTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCa > 1:970615/1‑93 (MQ=255)
aaGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCaaa > 2:1195448/1‑92 (MQ=255)
aaGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAAt > 2:825585/1‑93 (MQ=255)
aGCCCCCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATa < 1:4021439/93‑1 (MQ=255)
gcccgcccCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATAc < 2:5590468/93‑1 (MQ=255)
cccgcccCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATAcc > 1:4224781/1‑93 (MQ=255)
cccgcccCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATAcc < 2:6584718/93‑1 (MQ=255)
cgcccCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGc > 2:3458363/1‑93 (MQ=255)
ccccTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCtt > 2:591726/1‑93 (MQ=255)
cccTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCttt < 1:480643/93‑1 (MQ=255)
cccTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCttt < 2:5737939/93‑1 (MQ=255)
cTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTa > 1:457437/1‑93 (MQ=255)
tGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTaa < 1:1615482/93‑1 (MQ=255)
gCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAAc > 1:2365063/1‑93 (MQ=255)
gCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAAc < 1:117846/93‑1 (MQ=255)
acaACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGc > 2:4245159/1‑93 (MQ=255)
acaACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGc < 1:434323/93‑1 (MQ=255)
acaACCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGc > 2:298604/1‑93 (MQ=255)
catccTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCt < 1:2729997/90‑1 (MQ=255)
aaCCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCtt > 1:2073605/1‑93 (MQ=255)
aCCTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCttt > 1:6526368/1‑93 (MQ=255)
ccTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTg < 2:4925803/93‑1 (MQ=255)
ccTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTg > 1:1880964/1‑93 (MQ=255)
cTGCGTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGa > 1:1077735/1‑93 (MQ=255)
cgCGTCTATCCACCGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGAt < 2:4061066/92‑1 (MQ=255)
gTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTa > 1:6640178/1‑93 (MQ=255)
gTCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTa < 2:3196479/93‑1 (MQ=255)
tCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTAt > 1:838093/1‑93 (MQ=255)
tCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTAt > 1:353199/1‑93 (MQ=255)
tCTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTAt > 2:3325610/1‑93 (MQ=255)
cTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTAtt < 1:3359353/93‑1 (MQ=255)
cTATCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTAtt < 2:1869373/93‑1 (MQ=255)
aTCCACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGc > 1:4623065/1‑93 (MQ=255)
ccACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGCgg < 2:2603132/93‑1 (MQ=255)
cACTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGa > 2:3794127/1‑93 (MQ=255)
cTGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGAcc < 1:5688916/93‑1 (MQ=255)
tGCGCCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGACCa < 2:1635811/93‑1 (MQ=255)
gcCAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGACCaaaa < 2:744009/93‑1 (MQ=255)
ccAGGTTTTCTGGCGTCACGCCGCCAATGGCAAAGACTGCGATGTCCGATGGCAATACCGC‑TTTAACGCTTTGATGTATTGCGGACCAAAAGc > 2:3714809/1‑93 (MQ=255)
ccAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGACCAAAAg < 2:876965/93‑1 (MQ=255)
cAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGACCAAAAGc > 2:1985252/1‑93 (MQ=255)
cAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGACCAAAAGc > 2:6035725/1‑93 (MQ=255)
cAGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGACCAAAAGc > 1:1374798/1‑93 (MQ=255)
aGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGACCAAAAGcc > 1:5947614/1‑93 (MQ=255)
aGGTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGACCAAAAGcc > 1:3661536/1‑93 (MQ=255)
ggTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGACCAAAAGCCg > 1:3969462/1‑93 (MQ=255)
gTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGACCAAAAGCCGa < 1:1980907/93‑1 (MQ=255)
gTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGACCAAAAGCCGa < 1:6060312/93‑1 (MQ=255)
gTTTTCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGACCAAAAGCCGa > 1:6261630/1‑93 (MQ=255)
ttttCTGGCGTGACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGACCAAAAGCCGAt < 1:4707435/93‑1 (MQ=255)
ttttCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGACCAAAAGCCGAt < 2:2371204/93‑1 (MQ=255)
ttttCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGACCAAAAGCCGAt < 1:2175949/93‑1 (MQ=255)
ttttCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGACCAAAAGCCGAt < 2:5139370/93‑1 (MQ=255)
ttttCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGACCAAAAGCCGAt < 2:4851435/93‑1 (MQ=255)
ttttCTGGCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGACCAAAAGCCGAt < 1:776569/93‑1 (MQ=255)
|
GCGGTGCGCTCTACGGATTGCCCGGCGCGATAGAGATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCT‑GCGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGACCAAAAGCCGATG > NC_000913/3870672‑3870851
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
GCGGTGCGCTCTACGGATTGCCCGGCGCGATAGAGATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCT‑G‑CGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGACCAAAAGCCGATGACGG > NC_000913/3870672‑3870855
|
GCGGTGCGCTCTACGGATTGCCCGGCGCGATAGAGATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCT‑G > SRR4302547.3170728/1‑94 (MQ=60)
GCGGTGCGCTCTACGGATTGCCCGGCGCGATAGAGATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCT‑G > SRR4302547.6101281/1‑94 (MQ=60)
CCGGTGCGCTCTACGGATTGCCCGGCGCGATAGAGATCGCTGCCTAAGCCCGCCCCTGCATAACCTGCGTCTATCCACTGCGCCAGGTTTTCT‑G < SRR4302547.5775294/94‑1 (MQ=60)
CGGTGCGCTCTACGGATTGCCCGGCGCGATAGAGATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCT‑G‑G < SRR4302547.5434818/94‑1 (MQ=60)
CGGTGCGCTCTACGGATTGCCCGGCGCGATAGAGATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCT‑G‑G < SRR4302547.6710146/94‑1 (MQ=60)
GGTGCGCTCTACGGATTGCCCGGCGCGATAGAGATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCT‑Ggc > SRR4302547.5882720/1‑92 (MQ=60)
GTGCGCTCTACGGATTGCCCGGCGCGATAGAGATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCT‑Ggcg < SRR4302547.4168758/94‑4 (MQ=60)
GTGCGCTCTACGGATTGCCCGGCGCGATAGAGATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCT‑Ggcg < SRR4302547.4351003/94‑4 (MQ=60)
TGCGCTCTACGGATTGCCCGGCGCGATAGAGATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGG‑CGT < SRR4302547.4871758/94‑1 (MQ=60)
TGCGCTCTACGGATTGCCCGGCGCGATAGAGATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGG‑CGT < SRR4302547.3853655/94‑1 (MQ=60)
GCGCTCTACGGATTGCCCGGCGCGATAGAGATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGG‑CGTC < SRR4302547.3081928/94‑1 (MQ=60)
CGCTCTACGGATTGCCCGGCGCGATAGAGATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGG‑CGTCA > SRR4302547.2922069/1‑94 (MQ=60)
CGCTCTACGGATTGCCCGGCGCGATAGAGATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGG‑CGTCA < SRR4302547.2009898/94‑1 (MQ=60)
CGCTCTACGGATTGCCCGGCGCGATAGAGATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGG‑CGTCA < SRR4302547.1969238/94‑1 (MQ=60)
GCTCTACGGATTGCCCGGCGCGATAGAGATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGG‑CGTCAC > SRR4302547.2852815/1‑94 (MQ=60)
CCTCTACGGATTCCCCGCCGCGATAGAGATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGG‑CGTCAC < SRR4302547.3483183/94‑1 (MQ=60)
CTCTACGGATTGCCCGGCGCGATAGAGATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGG‑CGTCACG < SRR4302547.5545530/94‑1 (MQ=60)
CTCTACGGATTGCCCGGCGCGATAGAGATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGG‑CGTCACG < SRR4302547.2429636/94‑1 (MQ=60)
CTCTACGGATTGCCCGGCGCGATAGAGATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGG‑CGTCACG > SRR4302547.4030060/1‑94 (MQ=60)
CTCTACGGATTGCCCGGCGCGATAGAGATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGG‑CGTCACG < SRR4302547.1170480/94‑1 (MQ=60)
CTACGGATTGCCCGGCGCGATAGAGATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGG‑CGTCACGCC > SRR4302547.1146307/1‑94 (MQ=60)
TACGGATTGCCCGGCGCGATAGAGATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGG‑CGTCACGCCG < SRR4302547.3169352/94‑1 (MQ=60)
TACGGATTGCCCGGCGCGATAGAGATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGG‑CGTCACGCCG > SRR4302547.5215646/1‑94 (MQ=60)
TACGGATTGCCCGGCGCGATAGAGATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGG‑CGTCACGCCG > SRR4302547.3576695/1‑94 (MQ=60)
TACGGATTGCCCGGCGCGATAGAGATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGG‑CGTCACGCCG < SRR4302547.2969117/94‑1 (MQ=60)
ACGGATTGCCCGGCGCGATAGAGATCGCTGCCTAAGCCCGCCCCTGCACATCCTGCGTCTATCCACTGCGCCAGGTTTTCTGG‑CGTCACGCCGC < SRR4302547.3157148/94‑1 (MQ=60)
ACGGATTGCCCGGCGCGATAGAGATCGCTGCCTAAGCCCGCCCCTGCACACCCTGCGTCTATCCACTGCGCCAGGTTTTCTGG‑CGTCACGCCGC < SRR4302547.2145226/94‑1 (MQ=60)
CGGATTGCCCGGCGCGATAGAGATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGG‑CGTCACGCCGCC < SRR4302547.4597662/94‑1 (MQ=60)
GGATTGCCCGGCGCGATAGAGATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGG‑CGTCACGCCGCCA < SRR4302547.3169895/94‑1 (MQ=60)
GATTGCCCGGCGCGATAGAGATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGG‑CGTCACGCCGCCAA > SRR4302547.4284021/1‑94 (MQ=60)
ATTGCCCGGCGCGATAGAGATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGG‑CGTCACGCCGCCAAC < SRR4302547.2384037/94‑1 (MQ=60)
ATTGCCCGGCGCGATAGAGATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGGTTTCTGG‑CGTGACGCCGCCCAC > SRR4302547.3933087/1‑94 (MQ=60)
TTGCCCGGCGCGATAGAGATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGG‑CGTCACGCCGCCAACG < SRR4302547.1559662/94‑1 (MQ=60)
TGCCCGGCGCGATAGAGATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGG‑CGTCACGCCGCCAACGG < SRR4302547.3716064/94‑1 (MQ=60)
TGCCCGGCGCGATAGAGATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGG‑CGTCACGCCGCCAACGG > SRR4302547.3816226/1‑94 (MQ=60)
GCCCGGCGCGATAGAGATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGG‑CGTCACGCCGCCAACGGC < SRR4302547.2656830/94‑1 (MQ=60)
CCCGGCGCGATAGAGATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGG‑CGTCACGCCGCCAACGGCA < SRR4302547.1672318/94‑1 (MQ=60)
CGCGATAGAGATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGG‑CGTCACGCCGCCAACGGCAAAGAC < SRR4302547.3930112/94‑1 (MQ=60)
GCGATAGAGATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGG‑CGTCACGCCGCCAACGGCAAAGACT < SRR4302547.241378/94‑1 (MQ=60)
GCGATAGAGATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGG‑CGTCACGCCGCCAACGGCAAAGACT < SRR4302547.1993036/94‑1 (MQ=60)
GCGATAGAGATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGG‑CGTCACGCCGCCAACGGCAAAGACT > SRR4302547.4048310/1‑94 (MQ=60)
CGATAGAGATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGG‑CGTCACGCCGCCAACGGCAAAGACTG > SRR4302547.472309/1‑94 (MQ=60)
GATAGAGATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGG‑CGTCACGCCGCCAACGGCAAAGACTGC > SRR4302547.853803/1‑94 (MQ=60)
ATAGAGATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGG‑CGTCACGCCGCCAACGGCAAAGACTGCG < SRR4302547.500632/94‑1 (MQ=60)
ATAGAGATCGCTGCCTAACCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGG‑CGTCACGCCGCCAACGGCAAAGACTGCG < SRR4302547.4303113/94‑1 (MQ=60)
AGAGATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGG‑CGTCACGCCGCCAACGGCAAAGACTGCGAT > SRR4302547.4138973/1‑94 (MQ=60)
AGAGATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGG‑CGTCACGCCGCCAACGGCAAAGACTGCGAT > SRR4302547.2100044/1‑94 (MQ=60)
AGAGATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGG‑CGTCACGCCGCCAACGGCAAAGACTGCGAT < SRR4302547.5132101/94‑1 (MQ=60)
cagttcgcgcCCTAAGCCCGCCCCGGCACAGCCTGCGTCTATCCACTGCGCCAGGTTTTCTGG‑CGTCACGCCGCCAACGGCAAAGACTGCGATG < SRR4302547.1347724/84‑1 (MQ=60)
GAGATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGG‑CGTCACGCCGCCAACGGCAAAGACTGCGATG > SRR4302547.4274191/1‑94 (MQ=60)
GAGATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGG‑CGTCACGCCGCCAACGGCAAAGACTGCGATG < SRR4302547.2861484/94‑1 (MQ=60)
AGATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGG‑CGTCACGCCGCCAACGGCAAAGACTGCGATGT > SRR4302547.5592449/1‑94 (MQ=60)
AGATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGG‑CGTCACGCCGCCAACGGCAAAGACTGCGATGT > SRR4302547.2075587/1‑94 (MQ=60)
AGATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGG‑CGTCACGCCGCCAACGGCAAAGACTGCGATGT > SRR4302547.6311451/1‑94 (MQ=60)
TATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGG‑CGTCACGCCGCCAACGACAAAGACTGCGATGTC < SRR4302547.3194375/94‑1 (MQ=60)
AATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGG‑CGTCACGCCGCCAACGGCAAAGACTGCGATGTC < SRR4302547.1436836/94‑1 (MQ=60)
gtgtCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGG‑CGTAGCGCCGCCAACGGCAAAGACTGCGATGTCC < SRR4302547.5173498/90‑1 (MQ=60)
ATCGCTGCCTAGCCCCGCCCCTGCACAACCTGCGTCGATCCACTGCGCCAGGTTTTCTGG‑CGTCACGCCGCCAACGGCAAAGACTGCGATGTCT < SRR4302547.1555734/94‑1 (MQ=60)
ATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGG‑CGTCACGCCGCCAACGGCAAAGACTGCGATGTCC > SRR4302547.6246752/1‑94 (MQ=60)
ATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGG‑CGTCACGCCGCCAACGGCAAAGACTGCGATGTCC < SRR4302547.4321157/94‑1 (MQ=60)
TCGCTGCTTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGG‑CGTCACGCCGCCAACGGCAAAGACTGCGATGTCCG < SRR4302547.1274114/94‑1 (MQ=60)
CGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGG‑CGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGA > SRR4302547.912269/1‑94 (MQ=60)
CCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGG‑CGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGAT < SRR4302547.3661278/94‑1 (MQ=60)
CTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGG‑CGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATG < SRR4302547.6709430/94‑1 (MQ=60)
CTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGG‑CGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATG < SRR4302547.5659305/94‑1 (MQ=60)
CTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGG‑CGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATG < SRR4302547.511911/94‑1 (MQ=60)
CTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGG‑CGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATG < SRR4302547.2229461/94‑1 (MQ=60)
TGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGG‑CGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGG < SRR4302547.1157057/94‑1 (MQ=60)
GCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGG‑CGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGC > SRR4302547.5590253/1‑94 (MQ=60)
GCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGG‑CGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGC > SRR4302547.846291/1‑94 (MQ=60)
GCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGG‑CGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGC > SRR4302547.1123915/1‑94 (MQ=60)
CCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGG‑CGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCA > SRR4302547.989467/1‑94 (MQ=60)
CCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGG‑CGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCA < SRR4302547.2062745/94‑1 (MQ=60)
CTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGG‑CGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAA > SRR4302547.3733676/1‑94 (MQ=60)
CTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGG‑CGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAA > SRR4302547.4804704/1‑94 (MQ=60)
TAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGG‑CGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAAT < SRR4302547.5687098/94‑1 (MQ=60)
TAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGG‑CGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAAT < SRR4302547.6489138/94‑1 (MQ=60)
TAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGG‑CGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAAT > SRR4302547.520997/1‑94 (MQ=60)
TAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGG‑CGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAAT > SRR4302547.2771635/1‑94 (MQ=60)
AGCCCCCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGG‑CGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATAC < SRR4302547.4103143/94‑1 (MQ=60)
GCCCGCCCCTGCACACCCTGCGTCTATCCACTGCGCCAGGTTTTCTGG‑CGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACC < SRR4302547.4976095/94‑1 (MQ=60)
GCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGG‑CGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACC > SRR4302547.4311100/1‑94 (MQ=60)
GCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGG‑CGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACC > SRR4302547.5109608/1‑94 (MQ=60)
CCCGCCCCTGCACACCCTGCGTCTATCCACTGCGCCAGGTTTTCTGG‑CGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCG < SRR4302547.5782053/94‑1 (MQ=60)
CCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGG‑CGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGC > SRR4302547.3589548/1‑94 (MQ=60)
CGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGG‑CGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCT > SRR4302547.6069316/1‑94 (MQ=60)
CGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGG‑CGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCT < SRR4302547.3906015/94‑1 (MQ=60)
GCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGG‑CGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTT > SRR4302547.698459/1‑94 (MQ=60)
GCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGG‑CGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTT < SRR4302547.3964102/94‑1 (MQ=60)
GCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGG‑CGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTT > SRR4302547.6350414/1‑94 (MQ=60)
CCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGG‑CGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTT < SRR4302547.489465/94‑1 (MQ=60)
CCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGG‑CGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTT < SRR4302547.4075967/94‑1 (MQ=60)
CCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGG‑CGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTT > SRR4302547.5281897/1‑94 (MQ=60)
CCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGG‑CGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTA > SRR4302547.465901/1‑94 (MQ=60)
CCGGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGG‑CGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTA < SRR4302547.4976843/94‑1 (MQ=60)
TGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGG‑CGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAAC > SRR4302547.2413002/1‑94 (MQ=60)
TGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGG‑CGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAAC > SRR4302547.4672139/1‑94 (MQ=60)
TGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGG‑CGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAAC < SRR4302547.1647466/94‑1 (MQ=60)
GCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGG‑CGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACG < SRR4302547.119987/94‑1 (MQ=60)
CACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGG‑CGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGC < SRR4302547.3814143/94‑1 (MQ=60)
CACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGG‑CGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGC > SRR4302547.4912803/1‑94 (MQ=60)
CACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGG‑CGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGC > SRR4302547.1183191/1‑94 (MQ=60)
ACAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGG‑CGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCT < SRR4302547.442364/94‑1 (MQ=60)
CATCCTGCGTCTATCCACTGCGCCAGGTTTTCTGG‑CGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTT < SRR4302547.2784792/94‑1 (MQ=60)
CAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGG‑CGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTT > SRR4302547.2114982/1‑94 (MQ=60)
CAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGG‑CGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTT < SRR4302547.6472271/94‑1 (MQ=60)
CAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGG‑CGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTT < SRR4302547.5134838/94‑1 (MQ=60)
CAACCTGCGTCTATCCACTGCGCCAGGTTTTCTGG‑CGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTT > SRR4302547.4623435/1‑94 (MQ=60)
AACCTGCGTCTATCCACTGCGCCAGGTTTTCTGG‑CGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTT < SRR4302547.2711517/94‑1 (MQ=60)
AACCTGCGTCTATCCACTGCGCCAGGTTTTCTGG‑CGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTT > SRR4302547.6662232/1‑94 (MQ=60)
ACCTGCGTCTATCCACTGCGCCAGGTTTTCTGG‑CGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTG < SRR4302547.1840274/94‑1 (MQ=60)
ACCTGCGTCTATCCACTGCGCCAGGTTTTCTGG‑CGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTG > SRR4302547.1918130/1‑94 (MQ=60)
CCTGCGTCTATCCACTGCGCCAGGTTTTCTGG‑CGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGT > SRR4302547.4527150/1‑94 (MQ=60)
CCTGCGTCTATCCACTGCGCCAGGTTTTCTGG‑CGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGA > SRR4302547.1099241/1‑94 (MQ=60)
CCTGCGTCTATCCACTGCGCCAGGTTTTCTGG‑CGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGA < SRR4302547.1565332/94‑1 (MQ=60)
CCTGCGTCTATCCACTGCGCCAGGTTTTCTGG‑CGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGA > SRR4302547.4103546/1‑94 (MQ=60)
CTGCGTCTATCCACTGCGCCAGGTTTTCTGG‑CGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGAT > SRR4302547.6713298/1‑94 (MQ=60)
CTGCGTCTATCCACTGCGCCAGGTTTTCTGG‑CGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGAT < SRR4302547.4156625/94‑1 (MQ=60)
TGCGTCTATCCACTGCGCCAGGTTTTCTGG‑CGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATG < SRR4302547.3444158/94‑1 (MQ=60)
TGCGTCTATCCACTGCGCCAGGTTTTCTGG‑CGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATG < SRR4302547.2788330/94‑1 (MQ=60)
GCGTCTATCCACTGCGCCAGGTTTTCTGG‑CGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGT > SRR4302547.6366045/1‑94 (MQ=60)
GCGTCTATCCACTGCGCCAGGTTTTCTGG‑CGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGT > SRR4302547.6217846/1‑94 (MQ=60)
GCGTCTATCCACTGCGCCAGGTTTTCTGG‑CGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGT < SRR4302547.4703814/94‑1 (MQ=60)
CGTCTATCCACTGCGCCAGGTTTTCTGG‑CGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTA > SRR4302547.2115640/1‑94 (MQ=60)
CGTCTATCCACTGCGCCAGGTTTTCTGG‑CGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTA > SRR4302547.6778384/1‑94 (MQ=60)
GTCTATCCACTGCGCCAGGTTTTCTGG‑CGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTAT > SRR4302547.4083012/1‑94 (MQ=60)
GTCTATCCACTGCGCCAGGTTTTCTGG‑CGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTAT > SRR4302547.854081/1‑94 (MQ=60)
GTCTATCCACTGCGCCAGGTTTTCTGG‑CGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTAT > SRR4302547.359754/1‑94 (MQ=60)
CTATCCACTGCGCCAGGTTTTCTGG‑CGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTG > SRR4302547.543543/1‑94 (MQ=60)
CTATCCACTGCGCCAGGTTTTCTGG‑CGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTG < SRR4302547.5791540/94‑1 (MQ=60)
CTATCCACTGCGCCAGGTTTTCTGG‑CGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTG < SRR4302547.3427515/94‑1 (MQ=60)
TATCCACTGCGCCAGGTTTTCTGG‑CGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGC > SRR4302547.4718797/1‑94 (MQ=60)
TATCCACTGCGCCAGGTTTTCTGG‑CGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGC > SRR4302547.1269484/1‑94 (MQ=60)
TATCCACTGCGCCAGGTTTTCTGG‑CGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGC > SRR4302547.4309120/1‑94 (MQ=60)
TATCCACTGCGCCAGGTTTTCTGG‑CGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGC < SRR4302547.681563/94‑1 (MQ=60)
TCCACTGCGCCAGGTTTTCTGG‑CGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGCGG > SRR4302547.1973003/1‑94 (MQ=60)
TCCACTGCGCCAGGTTTTCTGG‑CGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGCGG < SRR4302547.340745/94‑1 (MQ=60)
TCCACTGCGCCAGGTTTTCTGG‑CGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATCGCAATACCGCTTTTAACGCTTTGATGTATTGCGG > SRR4302547.310366/1‑94 (MQ=60)
CCACTGCGCCAGGTTTTCTGG‑CGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGA > SRR4302547.5023344/1‑94 (MQ=60)
CTGCGCCAGGTTTTCTGG‑CGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGACCA < SRR4302547.5806392/94‑1 (MQ=60)
CGCCAGGTTTTCTGG‑CGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGACCAAAA > SRR4302547.1016094/1‑94 (MQ=60)
ccaAGGTTTTCTGG‑CGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGACCAAAAG < SRR4302547.6310063/91‑1 (MQ=60)
CCAGGTTTTCTGG‑CGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGACCAAAAGC > SRR4302547.1402366/1‑94 (MQ=60)
CAGGTTTTCTGG‑CGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGACCAAAAGCC > SRR4302547.6070949/1‑94 (MQ=60)
CAGGTTTTCTGG‑CGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGACCAAAAGCC > SRR4302547.3736230/1‑94 (MQ=60)
CAGGTTTTCTGG‑CGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGACCAAAAGCC < SRR4302547.5751912/94‑1 (MQ=60)
CAGGTTTTCT‑GACGTCACGCCGCCGACGGCAAAGACTGCGATGTCCGATGGCAATCCCGCTTTTAACGCTTTGATGTATTGCGGACCAAAAGCC < SRR4302547.4643697/94‑1 (MQ=60)
AGGTTTTCTGG‑CGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGACCAAAAGCCG > SRR4302547.614446/1‑94 (MQ=60)
AGGTTTTCTGG‑CGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGACCAAAAGCCG > SRR4302547.4050199/1‑94 (MQ=60)
AGGTTTTCTGG‑CGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGACCAAAAGCCG < SRR4302547.5671818/94‑1 (MQ=60)
AGGTTTTCTGG‑CGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGACCAAAAGCCG > SRR4302547.4138422/1‑94 (MQ=60)
AGGTTTTCTGG‑CGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGACCAAAAGCCG < SRR4302547.907239/94‑1 (MQ=60)
GGTTTTCTGG‑CGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGACCAAAAGCCGA > SRR4302547.6391715/1‑94 (MQ=60)
GTTTTCTGG‑CGTCACGCCGCCAACGGCAAAGACTGGGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGACCAAAAGCCGAT > SRR4302547.2706361/1‑94 (MQ=60)
GTTTTCTGG‑CGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATCCCGCTTTTAACGCTTTGATGTATTGCGGACCAAAATCCGAT < SRR4302547.4905444/94‑1 (MQ=60)
GTTTTCTGG‑CGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGACCAAAAGCCGAT < SRR4302547.2020240/94‑1 (MQ=60)
GTTTTCTGG‑CGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGACCAAAAGCCGAT < SRR4302547.6186019/94‑1 (MQ=60)
GTTTTCTGG‑CGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGACCAAAAGCCGAT < SRR4302547.5629836/94‑1 (MQ=60)
GTTTTCTGG‑CGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGACCAAAAGCCGAT < SRR4302547.4535439/94‑1 (MQ=60)
GTTTTCTGG‑CGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGACCAAAAGCCGAT < SRR4302547.4610813/94‑1 (MQ=60)
TTTTCTGG‑CGTGACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGACCAAAAGCCGATG < SRR4302547.4804921/94‑1 (MQ=60)
TTTTCTGG‑CGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGACCAAAAGCCGATG < SRR4302547.2219517/94‑1 (MQ=60)
TTTTCTGG‑CGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGACCAAAAGCCGATG < SRR4302547.791255/94‑1 (MQ=60)
TTTCTGG‑CGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGACCAAAAGCCGATGA < SRR4302547.994539/94‑1 (MQ=60)
TTCTGG‑CGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGACCAAAAGCCGATGAC < SRR4302547.2605446/94‑1 (MQ=60)
TTCTGG‑CGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGACCAAAAGCCGATGAC < SRR4302547.4723431/94‑1 (MQ=60)
TCTGG‑CGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGACCAAAAGCCGATGACG < SRR4302547.5262545/94‑1 (MQ=60)
ctgG‑CGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGACCAAAAGCCGATGACGG > SRR4302547.3352761/4‑94 (MQ=60)
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GCGGTGCGCTCTACGGATTGCCCGGCGCGATAGAGATCGCTGCCTAAGCCCGCCCCTGCACAACCTGCGTCTATCCACTGCGCCAGGTTTTCT‑G‑CGTCACGCCGCCAACGGCAAAGACTGCGATGTCCGATGGCAATACCGCTTTTAACGCTTTGATGTATTGCGGACCAAAAGCCGATGACGG > NC_000913/3870672‑3870855
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |