Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
593 |
264.2 |
13311096 |
97.8% |
13018251 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,909,645 |
T→C |
D551G (GAT→GGT) |
glmS ← |
L‑glutamine:D‑fructose‑6‑phosphate aminotransferase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,909,645 | 0 | T | C | 84.8%
| 728.1
/ 118.5
| 289 | D551G (GAT→GGT) | glmS | L‑glutamine:D‑fructose‑6‑phosphate aminotransferase |
| Reads supporting (aligned to +/- strand): ref base T (25/19); new base C (137/108); total (162/127) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.98e-01 |
Only 100 of 296 total aligned reads displayed.
GCAGCGGAACGGTGTAGAAGATCGGTGCAATCACCTCTTCCACATGCGGCATCTCGATGATGTGCATGTTATCGCTACTTACAAAACCCGCATCCTGATCGGCGAAGACATACAACTGACCGCCACGCGCGCGAACTTCTTCAATGTTGGATTTCAGTTTTTCCAGCAATTCGTTGTTCGGTGCA > NC_000913/3909553‑3909737
|
gCAGCGGAACGGTGTAGAAGATCGGTGCAATCACCTCTTCCACATGCGGCATCTCGATGATGTGCATGTTATCGCTACTTACAAAACCCGCAt > 2:5228090/1‑93 (MQ=255)
aGCGGAACGGTGTAGAAGATCGGTGCAATCACCTCTTCCACATGCGGCATCTCGATGATGTGCATGTTATCGCTACTTACAAAACCCGCAccc > 2:5086424/1‑93 (MQ=255)
aGCGGAACGGTGTAGAAGATCGGTGCAATCACCTCTTCCACATGCGGCATCTCGATGATGTGCATGTTATCGCTACTTACAAAACCCGCATcc > 1:4997533/1‑93 (MQ=255)
cGGAACGGTGTAGAAGATCGGTGCAATCACCTCTTCCACATGCGGCATCTCGATGATGTGCATGTTATCGCTACTTACAAAACCCGCACCCTg < 1:6278099/93‑1 (MQ=255)
ggAACGGTGTAGAAGATCGGTGCAATCACCTCTTCCACATGCGGCATCTCGATGATGTGCATGTTATCGCTACTTACAAAACCCGCATCCTGa > 2:2246341/1‑93 (MQ=255)
ggAACGGTGTAGAAGATCGGTGCAATCACCTCTTCCACATGCGGCATCTCGATGATGTGCATGTTATCGCTACTTACAAAACCCGCACCCTGa > 1:1672499/1‑93 (MQ=255)
ggAACGGTGTAGAAGATCGGTGCAATCACCTCTTCCACATGCGGCATCTCGATGATGTGCATGTTATCGCTACTTACAAAACCCGCACCCTGa < 1:1768499/93‑1 (MQ=255)
ggAACGGTGTAGAAGATCGGTGCAATCACCTCTTCCACATGCGGCATCTCGATGATGTGCATGTTATCGCTACTTACAAAACCCGCACCCTGa < 2:1299799/93‑1 (MQ=255)
gAACGGTGTAGAAGATCGGTGCAATCACCTCTTCCACATGCGGCATCTCGATGATGTGCATGTTATCGCTACTTACAAAACCCGCACCCTGAt > 1:4940083/1‑93 (MQ=255)
aaCGGTGTAGAAGATCGGTGCAATCACCTCTTCCACATGCGGCATCTCGATGATGTGCATGTTATCGCTACTTACAAAACCCGCATCCTGATc < 2:1065458/93‑1 (MQ=255)
aaCGGTGTAGAAGATCGGTGCAATCACCTCTTCCACATGCGGCATCTCGATGATGTGCATGTTATCGCTACTTACAAAACCCGCATCCTGATc > 2:420949/1‑93 (MQ=255)
aaCGGTGTAGAAGATCGGTGCAATCACCTCTTCCACATGCGGCATCTCGATGATGTGCATGTTATCGCTACTTACAAAACCCGCACCCTGATc < 1:2380300/93‑1 (MQ=255)
aCGGTGTAGAAGATCGGTGCAATCACCTCTTCCACATGCGGCATCTCGATGATGTGCATGTTATCGCTACTTACAAAACCCGCACCCTGATCg < 1:5075716/93‑1 (MQ=255)
aCGGTGTAGAAGATCGGTGCAATCACCTCTTCCACATGCGGCATCTCGATGATGTGCATGTTATCGCTACTTACAAAACCCGCACCCTGATCg > 1:2717902/1‑93 (MQ=255)
cGGTGTAGAAGATCGGTGCAATCACCTCTTCCACATGCGGCATCTCGATGATGTGCATGTTATCGCTACTTACAAAACCCGCACCCTGATCgg < 1:2273780/93‑1 (MQ=255)
tgtAGAAGATCGGTGCAATCACCTCTTCCACATGCGGCATCTCGATGATGTGCATGTTATCGCTACTTACAAAACCCGCACCCTGATCGGCGa > 2:4169576/1‑93 (MQ=255)
agaagaTCGGTGCAATCACCTCTTCCACATGCGGCATCTCGATGATGTGCATGTTATCGCTACTTACAAAACCCGCACCCTGATCGGCGAAGa > 2:6047433/1‑93 (MQ=255)
agaTCGGTGCAATCACCTCTTCCACATGCGGCATCTCGATGATGTGCATGTTATCGCTACTTACAAAACCCGCATCCTGATCGGCGAAGACAt > 1:370684/1‑93 (MQ=255)
gaTCGGTGCAATCACCTCTTCCACATGCGGCATCTCGATGATGTGCATGTTATCGCTACTTACAAAACCCGCACCCTGATCGGCGCAGACATa > 1:4515015/1‑93 (MQ=255)
aTCGGTGCAATCACCTCTTCCACATGCGGCATCTCGATGATGTGCATGTTATCGCTACTTACAAAACCCGCACCCTGATCGGCGAAGACATAc < 2:3229977/93‑1 (MQ=255)
aTCGGTGCAATCACCTCTTCCACATGCGGCATCTCGATGATGTGCATGTTATCGCTACTTACAAAACCCGCACCCTGATCGGCGAAGACATAc > 2:1997701/1‑93 (MQ=255)
aTCGGTGCAATCACCTCTTCCACATGCGGCATCTCGATGATGTGCATGTTATCGCTACTTACAAAACCCGCACCCTGATCGGCGAAGACATAc < 2:5947479/93‑1 (MQ=255)
ggTGCAATCACCTCTTCCACATGCGGCATCTCGATGATGTGCATGTTATCGCTACTTACAAAACCCGCACCCTGATCGGCGAAGACATACAAc > 2:1661831/1‑93 (MQ=255)
gTGCAATCACCTCTTCCACATGCGGCATCTCGATGATGTGCATGTTATCGCTACTTACAAAACCCGCACCCTGATCGGCGAAGACATACAACt > 1:3375350/1‑93 (MQ=255)
gTGCAATCACCTCTTCCACATGCGGCATCTCGATGATGTGCATGTTATCGCTACTTACAAAACCCGCACCCTGATCGGCGAAGACATACAACt > 2:4572634/1‑93 (MQ=255)
cAATCACCTCTTCCACATGCGGCATCTCGATGATGTGCATGTTATCGCTACTTACAAAACCCGCACCCTGATCGGCGAAGACATACAACTGAc < 2:1171418/93‑1 (MQ=255)
aaTCACCTCTTCCACATGCGGCATCTCGATGATGTGCATGTTATCGCTACTTACAAAACCCGCACCCTGATCGGCGAAGACATACAACTGAcc > 2:3660595/1‑93 (MQ=255)
aaTCACCTCTTCCACATGCGGCATCTCGATGATGTGCATGTTATCGCTACTTACAAAACCCGCACCCTGATCGGCGAAGACATACAACTGAcc < 2:5633850/93‑1 (MQ=255)
aTCACCTCTTCCACATGCGGCATCTCGATGATGTGCATGTTATCGCTACTTACAAAACCCGCACCCTGATCGGCGAAGACATACAACTGACCg > 1:3567882/1‑93 (MQ=255)
aTCACCTCTTCCACATGCGGCATCTCGATGATGTGCATGTTATCGCTACTTACAAAACCCGCACCCTGATCGGCGAAGACATACAAATGACCg > 2:464639/1‑93 (MQ=255)
cACCTCTTCCACATGCGGCATCTCGATGATGTGCATGTTATCGCTACTTACAAAACCCGCACCCTGATCGGCGAAGACATACAACTGACCGcc < 2:304007/93‑1 (MQ=255)
ccTCTTCCACATGCGGCATCTCGATGATGTGCATGTTATCGCTACTTACAAAACCCGCACCCTGATCGGCGAAGACATACAACTGACCGCCAc > 1:1121838/1‑93 (MQ=255)
ccTCTTCCACATGCGGCATCTCGATGATGTGCATGTTATCGCTACTTACAAAACCCGCACCCTGATCGGCGAAGACATACAACTGACCGCCAc < 1:1630763/93‑1 (MQ=255)
ctctTCCACATGCGGCATCTCGATGATGTGCATGTTATCGCTACTTACAAAACCCGCACCCTGATCGGCGAAGACATACAACTGACCGCCAcg > 1:2543134/1‑93 (MQ=255)
ctctTCCACATGCGGCATCTCGATGATGTGCATGTTATCGCTACTTACAAAACCCGCACCCTGATCGGCGAAGACATACAACTGACCGCCAcg > 2:4910979/1‑93 (MQ=255)
ctctTCCACATGCGGCATCTCGATGATGTGCATGTTATCGCTACTTACAAAACCCGCACCCTGATCGGCGAAGACATACAACTGACCGCCAcg < 1:1380227/93‑1 (MQ=255)
tctTCCACATGCGGCATCTCGATGATGTGCATGTTATCGCTACTTACAAAACCCGCACCCTGATCGGCGAAGACATACAACTGACCGCCAcgc > 1:959388/1‑93 (MQ=255)
tctTCCACATGCGGCATCTCGATGATGTGCATGTTATCGCTACTTACAAAACCCGCACCCTGATCGGCGAAGACATACAACTGACCGCCAcgc > 1:6190837/1‑93 (MQ=255)
ttCCACATGCGGCATCTCGATGATGTGCATGTTATCGCTACTTACAAAACCCGCATCCTGATCGGCGAAGACATACAACTGACCGCCAcgcgc < 2:607036/93‑1 (MQ=255)
ttCCACATGCGGCATCTCGATGATGTGCATGTTATCGCTACTTACAAAACCCGCACCCTGATCGGCGAAGACATACAACTGACCGCCAcgcgc > 2:1836733/1‑93 (MQ=255)
ttCCACATGCGGCATCTCGATGATGTGCATGTTATCGCTACTTACAAAACCCGCACCCTGATCGGCGAAGACATACAACTGACCGCCAcgcgc > 1:832460/1‑93 (MQ=255)
tCCACATGCGGCATCTCGATGATGTGCATGTTATCGCTACTTACAAAACCCGCACCCTGATCGGCGAAGACATACAACTGACCGCCAcgcgcg > 1:5098790/1‑93 (MQ=255)
ccACATGCGGCATCTCGATGATGTGCATGTTATCGCTACTTACAAAACCCGCACCCTGATCGGCGAAGACATACAACTGACCGCCAcgcgcgc < 1:5243003/93‑1 (MQ=255)
cacaTGCGGCATCTCGATGATGTGCATGTTATCGCTACTTACAAAACCCGCACCCTGATCGGCGAAGACATACAACTGACCGCCAcgcgcgcg > 1:4252552/1‑93 (MQ=255)
cacaTGCGACATCTCGATGATGTGCATGTTATCGCTACTTACAAAACCCGCACCCTGATCGGCGAAGACATACAACTGACCGCCAcgcgcgcg > 1:6501167/1‑93 (MQ=255)
gCGGCATCTCGATGATGTGCATGTTATCGCTACTTACAAAACCCGCACCCTGATCGGCGAAGACATACAACTGACCGCCACGCGCGCGAActt < 1:6437153/93‑1 (MQ=255)
ggCATCTCGATGATGTGCATGTTATCGCTACTTACAAAACCCGCACCCTGATCGGCGAAGACATACAACTGACCGCCACGCGCGCGAActtct > 2:1372254/1‑93 (MQ=255)
gCATCTCGATGATGTGCATGTTATCGCTACTTACAAAACCCGCATCCTGATCGGCGAAGACATACAACTGACCGCCACGCGCGCGAActtctt > 2:4819913/1‑93 (MQ=255)
cATCTCGATGATGTGCATGTTATCGCTACTTACAAAACCCGCACCCTGATCGGCGAAGACATACAACTGACCGCCACGCGCGCGAACttcttc < 2:4134073/93‑1 (MQ=255)
cATCTCGATGATGTGCATGTTATCGCTACTTACAAAACCCGCACCCTGATCGGCGAAGACATACAACTGACCGCCACGCGCGCGAACttcttc > 1:2057006/1‑93 (MQ=255)
tctcGATGATGTGCATGTTATCGCTACTTACAAAACCCGCATCCTGATCGGCGAAGACATACAACTGACCGCCACGCGCGCGAACTTCTTCaa > 2:2424145/1‑93 (MQ=255)
tctcGATGATGTGCATGTTATCGCTACTTACAAAACCCGCACCCTGATCGGCGAAGACATACAACTGACCGCCACGCGCGCGAACTTCTTCaa > 1:4667824/1‑93 (MQ=255)
ctcGATGATGTGCATGTTATCGCTACTTACAAAACCCGCACCCTGATCGGTGAAGACATACAACTGACCGCCACGCGCGCGAACTTCTTCAAt < 2:3567006/93‑1 (MQ=255)
tcGATGATGTGCATGTTATCGCTACTTACAAAACCCGCACCCTGATCGGCGAAGACATACAACTGACCGCCACGCGCGCGAACTTCTTCAATg < 2:3753002/93‑1 (MQ=255)
cGATGATGTGCATGTTATCGCTACTTACAAAACCCGCATCCTGATCGGCGAAGACATACAACTGACCGCCACGCGCGCGAACTTCTTCAATGt < 1:4078376/93‑1 (MQ=255)
cGATGATGTGCATGTTATCGCTACTTACAAAACCCGCACCCTGATCGGCGAAGACATACAACTGACCGCCACGCGCGCGAACTTCTTCAATGt > 1:5383084/1‑93 (MQ=255)
cGATGATGTGCATGTTATCGCTACTTACAAAACCCGCACCCTGATCGGCGAAGACATACAACTGACCGCCACGCGCGCGAACTTCTTCAATGt > 1:1056744/1‑93 (MQ=255)
gatgTGCATGTTATCGCTACTTACAAAACCCGCACCCTGATCGGCGAAGACATACAACTGACCGCCACGCGCGCGAACTTCTTCAATGTTGGa > 2:4421261/1‑93 (MQ=255)
gatgTGCATGTTATCGCTACTTACAAAACCCGCACCCTGATCGGCGAAGACATACAACTGACCGCCACGCGCGCGAACTTCTTCAATGTTGGa < 1:1203842/93‑1 (MQ=255)
gatgTGCATGTTATCGCTACTTACAAAACCCGCACCCTGATCGGCGAAGACATACAACTGACCGCCACGCGCGCGAACTTCTTCAATGTTGGa < 2:2816373/93‑1 (MQ=255)
atgTGCATGTTATCGCTACTTACAAAACCCGCATCCTGATCGGCGAAGACATACAACTGACCGCCACGCGCGCGAACTTCTTCAATGTTGGAt > 2:2881298/1‑93 (MQ=255)
atgTGCATGTTATCGCTACTTACAAAACCCGCACCCTGATCGGCGAAGACATACAACTGACCGCCACGCGCGCGAACTTCTTCAATGTTGGAt < 1:2846129/93‑1 (MQ=255)
atgTGCATGTTATCGCTACTTACAAAACCCGCACCCTGATCGGCGAAGACATACAACTGACCGCCACGCGCGCGAACTTCTTCAATGTTGGAt > 2:5723063/1‑93 (MQ=255)
tgtgCATGTTATCGCTACTTACAAAACCCGCACCCTGATCGGCGAAGACATACAACTGACCGCCACGCACGCGAACTTCTTCAATGTTGGAtt > 1:3262773/1‑93 (MQ=255)
gtgCATGTTATAGCTACTTACAAAACCCGCACCCTGATCGGCGAAGACATACAACTGACCGCCACGCGCGCGAACTTCTTCAATGTTGGAttt < 2:6254025/93‑1 (MQ=255)
tgCATGTTATCGCTACTTACAAAACCCGCACCCTGATCGGCGAAGACATACAACTGACCGCCACGCGCGCGAACTTCTTCAATGTTGGATTTc > 1:5849458/1‑93 (MQ=255)
tgCATGTTATCGCTACTTACAAAACCCGCACCCTGATCGGCGAAGACATACAACTGACCGCCACGCGCGCGAACTTCTTCAATGTTGGATTTc > 1:4342619/1‑93 (MQ=255)
gCATGTTATCGCTACTTACAAAACCCGCACCCTGATCGGCGAAGACATACAACTGACCGCCACGCGCGCGAACTTCTTCAATGTTGGATTTCa < 1:5788701/93‑1 (MQ=255)
gCATGTTATCGCTACTTACAAAACCCGCACCCTGATCGGCGAAGACATACAACTGACCGCCACGCGCGCGAACTTCTTCAATGTTGGATTTCa > 1:2903859/1‑93 (MQ=255)
cATGTTATCGCTACTTACAAAACCCGCACCCTGATCGGCGAAGACATACAACTGACCGCCACGCGCGCGAACTTCTTCAATGTTGGATTTCAg > 1:200340/1‑93 (MQ=255)
tGTTATCGCTACTTACAAAACCCGCACCCTGATCGGCGAAGACATACAACTGACCGCCACGCGCGCGAACTTCTTCAATGTTGGATTTCAGtt > 2:5574803/1‑93 (MQ=255)
gTTATCGCTACTTACAAAACCCGCACCCTGATCGGCGAAGACATACAACTGACCGCCACGCGCGCGAACTTCTTCAATGTTGGATTTCAGttt < 1:4463006/93‑1 (MQ=255)
tATCGCTACTTACAAAACCCGCACCCTGATCGGCGAAGACATACAACTGACCGCCACGCGCGCGAACTTCTTCAATGTTGGATTTCAGttttt < 2:3545662/93‑1 (MQ=255)
aTCGCTACTTACAAAACCCGCACCCTGATCGGCGAAGACATACAACTGACCGCCACGCGCGCGAACTTCTTCAATGTTGGATTTCAGTTTTTc < 2:6346991/93‑1 (MQ=255)
cGCTACTTACAAAGCCCGCACCCTGATCGGCGAAGACATACAACTGACCGCCACGCGCGCGAACTTCTTCAATGTTGGATTTCAGTTTTTCCa < 2:3593116/93‑1 (MQ=255)
cGCTACTTACAAAACCCGCGCCCTGATCGGCGAAGACATACAACTGACCGCCACGCGCGCGAACTTCTTCAATGTTGGATTTCAGTTTTTCCa < 1:3045574/93‑1 (MQ=255)
gCTACTTACAAAACCCGCATCCTGATCGGCGAAGACATACAACTGACCGCCACGCGCGCGAACTTCTTCAATGTTGGATTTCAGTTTTTCCAg > 2:5427358/1‑93 (MQ=255)
cTACTTACAAAACCCGCACCCTGATCGGCGAAGACATACAACTGACCGCCACGCGCGCGAACTTCTTCAATGTTGGATTTCAGTTTTTCCAGc < 1:5477525/93‑1 (MQ=255)
tACTTACAAAACCCGCACCCTGATCGGCGAAGACATACAACTGACCGCCACGCGCGCGAACTTCTTCAATGTTGGATTTCAGTTTTTCCAGCa > 2:821449/1‑93 (MQ=255)
tACTTACAAAACCCGCACCCTGATCGGCGAAGACATACAACTGACCGCCACGCGCGCGAACTTCTTCAATGTTGGATTTCAGTTTTTCCAGCa > 2:1439053/1‑93 (MQ=255)
tACTTACAAAACCCGCACCCTGATCGGCGAAGACATACAACTGACCGCCACGCGCGCGAACTTCTTCAATGTTGGATTTCAGTTTTTCCAGCa > 1:3666763/1‑93 (MQ=255)
tACTTACAAAACCCGCACCCTGATCGGCGAAGACATACAACTGACCGCCACGCGCGCGAACTTCTTCAATGTTGGATTTCAGTTTTTCCAGCa > 1:5947082/1‑93 (MQ=255)
aCTTACAAAACCCGCACCCTGATCGGCGAAGACATACAACTGACCGCCACGCGCGCGAACTTCTTCAATGTTGGATTTCAGTTTTTCCAGCaa < 2:4342582/93‑1 (MQ=255)
cTTACAAAACCCGCACCCTGATCGGCGAAGACATACAACTGACCGCCACGCGCGCGAACTTCTTCAATGTTGGATTTCAGTTTTTCCAGCAAt > 1:2123148/1‑93 (MQ=255)
cTTACAAAACCCGCACCCTGATCGGCGAAGACATACAACTGACCGCCACGCGCGCGAACTTCTTCAATGTTGGATTTCAGTTTTTCCAGCAAt < 2:653503/93‑1 (MQ=255)
ttACAAAACCCGCATCCTGATCGGCGAAGACATACAACTGACCGCCACGCGCGCGAACTTCTTCAATGTTGGATTTCAGTTTTTCCAGCAAtt > 2:1547139/1‑93 (MQ=255)
ttACAAAACCCGCACCCTGATCGGCGAAGACATACAACTGACCGCCACGCGCGCGAACTTCTTCAATGTTGGATTTCAGTTTTTCCAGCAAtt < 2:390265/93‑1 (MQ=255)
ttACAAAACCCGCACCCTGATCGGCGAAGACATACAACTGACCGCCACGCGCGCGAACTTCTTCAATGTTGGATTTCAGTTTTTCCAGCAAtt > 2:26477/1‑93 (MQ=255)
aCAAAACCCGCACCCTGATCGGCGAAGACATACAACTGACCGCCACGCGCGCGAACTTCTTCAATGTTGGATTTCAGTTTTTCCAGCAATTCg > 2:3445085/1‑93 (MQ=255)
aCAAAACCCGCACCCTGATCGGCGAAGACATACAACTGACCGCCACGCGCGCGAACTTCTTCAATGTTGGATTTCAGTTTTTCCAGCAATTCg < 2:5855850/93‑1 (MQ=255)
aaaaCCCGCATCCTGATCGGCGAAGACATACAACTGACCGCCACGCGCGCGAACTTCTTCAATGTTGGATTTCAGTTTTTCCAGCAATTCgtt < 2:5332159/93‑1 (MQ=255)
aaaCCCGCACCCTGATCGGCGAAGACATACAACTGACCGCCACGCGCGCGAACTTCTTCAATGTTGGATTTCAGTTTTTCCAGCAATTCgttg > 1:4884405/1‑93 (MQ=255)
accccGCACCCTGATCGGCGAAGACATACAACTGACCGCCACGCGCGCGAACTTCTTCAATGTTGGATTTCAGTTTTTCCAGCAATTCgttgt < 2:248961/91‑1 (MQ=255)
aaCCCGCACCCTGATCGGCGAAGACATACAACTGACCGCCACGCGCGCGAACTTCTTCAATGTTGGATTTCAGTTTTTCCAGCAATTCgttgt > 1:6602251/1‑93 (MQ=255)
aaCCCGCACCCTGATCGGCGAAGACATACAACTGACCGCCACGCGCGCGAACTTCTTCAATGTTGGATTTCAGTTTTTCCAGCAATTCgttgt < 1:3930930/93‑1 (MQ=255)
cccGCATCCTGATCGGCGAAGACATACAACTGACCGCCACGCGCGCGAACTTCTTCAATGTTGGATTTCAGTTTTTCCAGCAATTCGTTGTTc < 1:6034380/93‑1 (MQ=255)
cccGCACCCTGATCGGCGAAGACATACAACTGACCGCCACGCGCGCGAACTTCTTCAATGTTGGATTTCAGTTTTTCCAGCAATTCGTTGTTc < 2:1421191/93‑1 (MQ=255)
ccGCACCCTGATCGGCGAAGACATACAACTGACCGCCACGCGCGCGAACTTCTTCAATGTTGGATTTCAGTTTTTCCAGCAATTCGTTGTTCg > 1:726297/1‑93 (MQ=255)
gCACCCTGATCGGCGAAGACATACAACTGACCGCCACGCGCGCGAACTTCTTCAATGTTGGATTTCAGTTTTTCCAGCAATTCGTTGTTCGGt < 1:5742266/93‑1 (MQ=255)
tCCTGATCGGCGAAGACATACAACTGACCGCCACGCGCGCGAACTTCTTCAATGTTGGATTTCAGTTTTTCCAGCAATTCGTTGTTCGGTGca > 2:6446213/1‑93 (MQ=255)
|
GCAGCGGAACGGTGTAGAAGATCGGTGCAATCACCTCTTCCACATGCGGCATCTCGATGATGTGCATGTTATCGCTACTTACAAAACCCGCATCCTGATCGGCGAAGACATACAACTGACCGCCACGCGCGCGAACTTCTTCAATGTTGGATTTCAGTTTTTCCAGCAATTCGTTGTTCGGTGCA > NC_000913/3909553‑3909737
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
TGCAGCGGAACGGTGTAGAAGATCGGTGCAATCACCTCTTCCACATGCGGCATCTCGATGATGTGCATGTTATCGCTACTTACAAAACCCGCATCCTGATCGGCGAAGACATACAACTGACCGCCACGCGCGCGAACTTCTTCAATGTTGGATTTCAGTTTTTCCAGCAATTCGTTGTTCGGTGCAA > NC_000913/3909552‑3909738
|
TGCAGCGGAACGGTGTAGAAGATCGGTGCAATCACCTCTTCCACATGCGGCATCTCGATGATGTGCATGTTATCGCTACTTACAAAACCCGCAC < SRR4302547.1419414/94‑1 (MQ=60)
GCAGCGGAACGGTGTAGAAGATCGGTGCAATCACCTCTTCCACATGCGGCATCTCGATGATGTGCATGTTATCGCTACTTACAAAACCCGCATC < SRR4302547.1756349/94‑1 (MQ=60)
CAGCGGAACGGTGTAGAAGATCGGTGCAATCACCTCTTCCACATGCGGCATCTCGATGATGTGCATGTTATCGCTACTTACAAAACCCGCATCC > SRR4302547.5100868/1‑94 (MQ=60)
CAGCGGAACGGTGTAGAAGATCGGTGCAATCACCTCTTCCACATGCGGCATCTCGATGATGTGCATGTTATCGCTACTTACAAAACCCGCACCC < SRR4302547.6747124/94‑1 (MQ=60)
AGCGGAACGGTGTAGAAGATCGGTGCAATCACCTCTTCCACATGCGGCATCTCGATGATGTGCATGTTATCGCTACTTACAAAACCCGCATCCT < SRR4302547.6392443/94‑1 (MQ=60)
AGCGGAACGGTGTAGAAGATCGGTGCAATCACCTCTTCCACATGCGGCATCTCGATGATGTGCATGTTATCGCTACTTACAAAACCCGCACCCT > SRR4302547.5650683/1‑94 (MQ=60)
CGGAACGGTGTAGAAGATCGGTGCAATCACCTCTTCCACATGCGGCATCTCGATGATGTGCATGTTATCGCTACTTACAAAACCCGCACCCTGA < SRR4302547.6408530/94‑1 (MQ=60)
CGGAACGGTGTAGAAGATCGGTGCAATCACCTCTTCCACATGCGGCATCTCGATGATGTGCATGTTATCGCTACTTACAAAACCCGCACCCTGA > SRR4302547.1705447/1‑94 (MQ=60)
GGAACGGTGTAGAAGATCGGTGCAATCACCTCTTCCACATGCGGCATCTCGATGATGTGCATGTTATCGCTACTTACAAAACCCGCACCCTGAT > SRR4302547.3395099/1‑94 (MQ=60)
GGAACGGTGTAGAAGATCGGTGCAATCACCTCTTCCACATGCGGCATCTCGATGATGTGCATGTTATCGCTACTTACAAAACCCGCACCCTGAT > SRR4302547.3883289/1‑94 (MQ=60)
GGAACGGTGTAGAAGATCGGTGCAATCACCTCTTCCACATGCGGCATCTCGATGATGTGCATGTTATCGCTACTTACAAAACCCGCACCCTGAT < SRR4302547.1803568/94‑1 (MQ=60)
GGAACGGTGTAGAAGATCGGTGCAATCACCTCTTCCACATGCGGCATCTCGATGATGTGCATGTTATCGCTACTTACAAAACCCGCACCCTGAT > SRR4302547.5042391/1‑94 (MQ=60)
GGAACGGTGTAGAAGATCGGTGCAATCACCTCTTCCACATGCGGCATCTCGATGATGTGCATGTTATCGCTACTTACAAAACCCGCACCCTGAT < SRR4302547.3154725/94‑1 (MQ=60)
GAACGGTGTCGAAGATCGGTGCAATCACCTCTTCCACATGCGGCATCTCGATGATGTGCATGTTATCGCTACTTACAAAACCCGCACCCTGATC > SRR4302547.6590635/1‑94 (MQ=60)
GAACGGTGTAGAAGATCGGTGCAATCACCTCTTCCACATGCGGCATCTCGATGATGTGCATGTTATCGCTACTTACAAAACCCGCACCCTGATC > SRR4302547.4361893/1‑94 (MQ=60)
GAACGGTGTAGAAGATCGGTGCAATCACCTCTTCCACATGCGGCATCTCGATGATGTGCATGTTATCGCTACTTACAAAACCCGCACCCTGATC < SRR4302547.290650/94‑1 (MQ=60)
AACGGTGTAGAAGATCGGTGCAATCACCTCTTCCACATGCGGCATCTCGATGATGTGCATGTTATCGCTACTTACAAAACCCGCACCCTGATCG < SRR4302547.2428525/94‑1 (MQ=60)
AACGGTGTAGAAGATCGGTGCAATCACCTCTTCCACATGCGGCATCTCGATGATGTGCATGTTATCGCTACTTACAAAACCCGCACCCTGATCG > SRR4302547.2772468/1‑94 (MQ=60)
AACGGTGTAGAAGATCGGTGCAATCACCTCTTCCACATGCGGCATCTCGATGATGTGCATGTTATCGCTACTTACAAAACCCGCACCCTGATCG > SRR4302547.5542338/1‑94 (MQ=60)
ACGGTGTAGAAGATCGGTGCAATCACCTCTTCCACATGCGGCATCTCGATGATGTGCATGTTATCGCTACTTACAAAACCCGCACCCTGATCGG < SRR4302547.5180424/94‑1 (MQ=60)
CGGTGTAGAAGATCGGTGCAATCACCTCTTCCACATGCGGCATCTCGATGATGTGCATGTTATCGCTACTTACAAAACCCGCACCCTGATCGGC < SRR4302547.2319768/94‑1 (MQ=60)
GTGTAGAAGATCGGTGCAATCACCTCTTCCACATGCGGCATCTCGATGATGTGCATGTTATCGCTACTTACAAAACCCGCATCCTGATCGGCGA > SRR4302547.2425861/1‑94 (MQ=60)
TGTAGAAGATCGGTGCAATCACCTCTTCCACATGCGGCATCTCGATGATGTGCATGTTATCGCTACTTACAAAACCCGCACCCTGATCGGCGAA < SRR4302547.5062371/94‑1 (MQ=60)
TGTAGAAGATCGGTGCAATCACCTCTTCCACATGCGGCATCTCGATGATGTGCATGTTATCGCTACTTACAAAACCCGCACCCTGATCGGCGAA > SRR4302547.812333/1‑94 (MQ=60)
TAGAAGATCGGTGCAATCACCTCTTCCACATGCGGCATCTCGATGATGTGCATGTTATCGCTACTTACAAAACCCGCACCCTGATCGGCGAAGA > SRR4302547.4581234/1‑94 (MQ=60)
TAGAAGATCGGTGCAATCACCTCTTCCACATGCGGCATCTCGATGATGTGCATGTTATCGCTACTTACAAAACCCGCACCCTGATCGGCGAAGA < SRR4302547.4845802/94‑1 (MQ=60)
AAGATCGGTGCAATCACCTCTTCCACATGCGGCATCTCGATGATGTGCATGTTATCGCTACTTACAAAACCCGCATCCTGATCGGCGAAGACAT > SRR4302547.377554/1‑94 (MQ=60)
AGATCGGTGCAATCACCTCTTCCACATGCGGCATCTCGATGATGTGCATGTTATCGCTACTTACAAAACCCGCACCCTGATCGGCGCAGACATA > SRR4302547.4608300/1‑94 (MQ=60)
GATCGGTGCAATCACCTCTTCCACATGCGGCATCTCGATGATGTGCATGTTATCGCTACTTACAAAACCCGCACCCTGATCGGCGAAGACATAC < SRR4302547.4390848/94‑1 (MQ=60)
ATCGGTGCAATCACCTCTTCCACATGCGGCATCTCGATGATGTGCATGTTATCGCTACTTACAAAACCCGCACCCTGATCGGCGAAGACATACA > SRR4302547.1514401/1‑94 (MQ=60)
ATCGGTGCAATCACCTCTTCCACATGCGGCATCTCGATGATGTGCATGTTATCGCTACTTACAAAACCCGCACCCTGATCGGCGAAGACATACA > SRR4302547.1349104/1‑94 (MQ=60)
ATCGGTGCAATCACCTCTTCCACATGAGGCATCTCGATGATGTGCATGTTATCGCTACTTACAAAACCCGCACCCTGATCGGCGAAGACATACA < SRR4302547.5472130/94‑1 (MQ=60)
TCGGTGCAATCACCTCTTCCACATGCGGCATCTCGATGATGTGCATGTTATCGCTACTTACAAAACCCGCACCCTGATCGGCGAAGACATACAA > SRR4302547.3573861/1‑94 (MQ=60)
GGTGCAATCACCTCTTCCACATGCGGCATCTCGATGATGTGCATGTTATCGCTACTTACAAAACCCGCACCCTGATCGGCGAAGACATACAACT > SRR4302547.3443922/1‑94 (MQ=60)
TGCAATCACCTCTTCCACATGCGGCATCTCGATGATGTGCATGTTATCGCTACTTACAAAACCCGCATCCTGATCGGCGAAGACATACAACTGA > SRR4302547.512252/1‑94 (MQ=60)
TGCAATCACCTCTTCCACATGCGGCATCTCGATGATGTGCATGTTATCGCTACTTACAAAACCCGCACCCTGATCGGCGAAGACATACAACTGA < SRR4302547.6059617/94‑1 (MQ=60)
TGCAATCACCTCTTCCACATGCGGCATCTCGATGATGTGCATGTTATCGCTACTTACAAAACCCGCACCCTGATCGGCGAAGACATACAACTGA > SRR4302547.3185863/1‑94 (MQ=60)
GCAATCACCTCTTCCACATGCGGCATCTCGATGATGTGCATGTTATCGCTACTTACAAAACCCGCATCCTGATCGGCGAAGACATACAACTGAC > SRR4302547.1263479/1‑94 (MQ=60)
GCAATCACCTCTTCCACATGCGGCATCTCGATGATGTGCATGTTATCGCTACTTACAAAACCCGCACCCTGATCGGCGAAGACATACAACTGAC > SRR4302547.5000193/1‑94 (MQ=60)
CAATCACCTCTTCCACATGCGGCATCTCGATGATGTGCATGTTATCGCTACTTACAAAACCCGCATCCTGATCGGCGAAGACATACAACTGACC > SRR4302547.5894926/1‑94 (MQ=60)
CAATCACCTCTTCCACATGCGGCATCTCGATGATGTGCATGTTATCGCTACTTACAAAACCCGCACCCTGATCGGCGAAGACATACAACTGACC > SRR4302547.6158078/1‑94 (MQ=60)
CAATCACCTCTTCCACATGCGGCATCTCGATGATGTGCATGTTATCGCTACTTACAAAACCCGCACCCTGATCGGCGAAGACATACAACTGACC < SRR4302547.2082806/94‑1 (MQ=60)
AATCACCTCTTCCACATGCGGCATCTCGATGATGTGCATGTTATCGCTACTTACAAAACCCGCACCCTGATCGGCGAAGACATACAACTGACCG > SRR4302547.3640674/1‑94 (MQ=60)
TCACCTCTCCCACATGCGGCATCTCGATGATGTGCATGTGATCGCTACTTACAAAACCCGCACCCTGATCGGCGAAGACATACAACTGACCGCC < SRR4302547.5880174/94‑1 (MQ=60)
CACCTCTTCCACATGCGGCATCTCGATGATGTGCATGTTATCGCTACTTACAAAACCCGCCCCCTGATCGGCGAAGACATACAACTGACCGCCA < SRR4302547.5194515/94‑1 (MQ=60)
CACCTCTTCCACATGCGGCATCTCGATGATGTGCATGTTATCGCTACTTACAAAACCCGCACCCTGATCGGCGAAGACATACAACTGACCGCCA < SRR4302547.50496/94‑1 (MQ=60)
ACCTCTTCCACATGCGGCATCTCGATGATGTGCATGTTATCGCTACTTACAAAACCCGCACCCTGATCGGCGAAGACATACAACTGACCGCCAC > SRR4302547.4590941/1‑94 (MQ=60)
ACCTCTTCCACATGCGGCATCTCGATGATGTGCATGTTATCGCTACTTACAAAACCCGCACCCTGATCGGCGAAGACATACAACTGACCGCCAC > SRR4302547.1144462/1‑94 (MQ=60)
CCTCTTCCACATGCGGCATCTCGATGATGTGCATGTTATCGCTACTTACAAAACCCGCACCCTGATCGGCGAAGACATACAACTGACCGCCACG < SRR4302547.1663048/94‑1 (MQ=60)
CCTCTTCCACATGCGGCATCTCGATGATGTGCATGTTATCGCTACTTACAAAACCCGCACCCTGATCGGCGAAGACATACAACTGACCGCCACG > SRR4302547.2925435/1‑94 (MQ=60)
CCTCTTCCACATGCGGCATCTCGATGATGTGCATGTTATCGCTACTTACAAAACCCGCACCCTGATCGGCGAAGACATACAACTGACCGCCACG > SRR4302547.2594502/1‑94 (MQ=60)
CTCTTCCACATGCGGCATCTCGATGATGTGCATGTTATCGCTACTTACAAAACCCGCACCCTGATCGGCGAAGACATACAACTGACCGCCACGC > SRR4302547.978031/1‑94 (MQ=60)
CTCTTCCACATGCGGCATCTCGATGATGTGCATGTTATCGCTACTTACAAAACCCGCACCCTGATCGGCGAAGACATACAACTGACCGCCACGC > SRR4302547.6319354/1‑94 (MQ=60)
CTCTTCCACATGCGGCATCTCGATGATGTGCATGTTATCGCTACTTACAAAACCCGCACCCTGATCGGCGAAGACATACAACTGACCGCCACGC < SRR4302547.1407891/94‑1 (MQ=60)
CTCTTCCACATGCGGCATCTCGATGATGTGCATGTTATCGCTACTTACAAAACCCGCACCCTGATCGGCGAAGACATACAACTGACCGCCACGC > SRR4302547.6774715/1‑94 (MQ=60)
CTTCCACATGCGGCATCTCGATGATGTGGATGTTATCGCTACTTACAAAACCCGCACCCTGATCGGCGAAGACATACAACTGACCGCCACGCGC < SRR4302547.6374654/94‑1 (MQ=60)
CTTCCACATGCGGCATCTCGATGATGTGCATGTTATCGCTACTTACAAAACCCGCATCCTGATCGGCGAAGACATACAACTGACCGCCACGCGC > SRR4302547.2327994/1‑94 (MQ=60)
CTTCCACATGCGGCATCTCGATGATGTGCATGTTATCGCTACTTACAAAACCCGCACCCTGATCGGCGAAGACATACAACTGACCGCCACGCGC > SRR4302547.848344/1‑94 (MQ=60)
CTTCCACATGCGGCATCTCGATGATGTGCATGTTATCGCTACTTACAAAACCCGCACCCTGATCGGCGAAGACATACAACTGACCGCCACGCGC > SRR4302547.4637044/1‑94 (MQ=60)
CTTCCACATGCGGCATCTCGATGATGTGCATGTTATCGCTACTTACAAAACCCGCACCCTGATCGGCGAAGACATACAACTGACCGCCACGCGC < SRR4302547.679606/94‑1 (MQ=60)
TTCCACATGCGGCATCTCGATGATGTGCATGTTATCGCTACTTACAAAACCCGCACCCTGATCGGCGAAGACATACAACTGACCGCCACGCGCG > SRR4302547.5203921/1‑94 (MQ=60)
CCACATGCGGCATCTCGATGATGTGCATGTTATCGCTACTTACAAAACCCGCACCCTGATCGGCGAAGACATACAACTGACCGCCACGCGCGCG > SRR4302547.1214280/1‑94 (MQ=60)
CCACATGCGGCATCTCGATGATGTGCATGTTATCGCTACTTACAAAACCCGCACCCTGATCGGCGAAGACATACAACTGACCGCCACGCGCGCG < SRR4302547.5350917/94‑1 (MQ=60)
CCACATGCGGCATCTCGATGATGTGCATGTTATCGCTACTTACAAAACCCGCACCCTGATCGGCGAAGACATACAACTGACCGCCACGCGCGCG > SRR4302547.4339561/1‑94 (MQ=60)
CCACATGCGACATCTCGATGATGTGCATGTTATCGCTACTTACAAAACCCGCACCCTGATCGGCGAAGACATACAACTGACCGCCACGCGCGCG > SRR4302547.6636487/1‑94 (MQ=60)
CACATGCGGCATCTCGATGATGTGCATGTTATCGCTACTTACAAAACCCGCACCCTGATCGGCGAAGACATACAACTGACCGCCACGCGCGCGA > SRR4302547.2810007/1‑94 (MQ=60)
GCGGCATCTCGATGATGTGCATGTTATCGCTACTTACAAAACCCGCACCCTGATCGGCGAAGACATACAACTGACCGCCACGCGCGCGAACTTC < SRR4302547.6571312/94‑1 (MQ=60)
GCGGCATCTCGATGATGTGCATGTTATCGCTACTTACAAAACCCGCACCCTGATCGGCGAAGACATACAACTGACCGCCACGCGCGCGAACTTC < SRR4302547.819940/94‑1 (MQ=60)
CGGCATCTCGATGATGTGCATGTTATCGCTACTTACAAAACCCGCATCCTGATCGGCGAAGACATACAACTGACCGCCACGCGCGCGAACTTCT < SRR4302547.2004956/94‑1 (MQ=60)
CGGCATCTCGATGATGTGCATGTTATCGCTACTTACAAAACCCGCACCCTGATCGGCGAAGACATACAACTGACCGCCACGCGCGCGAACTTCT > SRR4302547.2106536/1‑94 (MQ=60)
GGCATCTCGATGATGTGCATGTTATCGCTACTTACAAAACCCGCATCCTGATCGGCGAAGACATACAACTGACCGCCACGCGCGCGAACTTCTT < SRR4302547.3006712/94‑1 (MQ=60)
GGCATCTCGATGATGTGCATGTTATCGCTACTTACAAAACCCGCACCCTGATCGGCGAAGACATACAACTGACCGCCACGCGCGCGAACTTCTT > SRR4302547.4772384/1‑94 (MQ=60)
GCATCTCGATGATGTGCATGTTATCGCTACTTACAAAACCCGCATCCTGATCGGCGAAGACATACAACTGACCGCCACGCGCGCGAACTTCTTC < SRR4302547.3747168/94‑1 (MQ=60)
GCATCTCGATGATGTGCATGTTATCGCTACTTACAAAACCCGCACCCTGATCGGCGAAGACATACAACTGACCGCCACGCGCGCGAACTTCTTC > SRR4302547.2098051/1‑94 (MQ=60)
GCATCTCGATGATGTGCATGTTATCGCTACTTACAAAACCCGCACCCTGATCGGCGAAGACATACAACTGACCGCCACGCGCGCGAACTTCTTC > SRR4302547.6527497/1‑94 (MQ=60)
CATCTCGATGATGTGCATGTTATCGCTACTTACAAAACCCGCATCCTGATCGGCGAAGACATACAACTGACCGCCACGCGCGCGAACTTCTTCA > SRR4302547.2509872/1‑94 (MQ=60)
CATCTCGATGATGTGCATGTTATCGCTACTTACAAAACCCGCACCCTGATCGGCGAAGACATACAACTGACCGCCACGCGCGCGAACTTCTTCA < SRR4302547.2733906/94‑1 (MQ=60)
CATCTCGATGATGTGCATGTTATCGCTACTTACAAAACCCGCACCCTGATCGGCGAAGACATACAACTGACCGCCACGCGCGCGAACTTCTTCA > SRR4302547.5393628/1‑94 (MQ=60)
CATCTCGATGATGTGCATGTTATCGCTACTTACAAAACCCGCACCCTGATCGGCGAAGACATACAACTGACCGCCACGCGCGCGAACTTCTTCA < SRR4302547.5928707/94‑1 (MQ=60)
ATGTCGATGATGTGCATGTTATCGCTACTTACAAAACCCGCACCCTGATCGGCGAAGACATACAACTGACCGCCACGCGCGCGAACTTCTTCAA > SRR4302547.6687280/1‑94 (MQ=60)
ATCTCGATGATGTGCATGTTATCGCTACTTACAAAACCCGCACCCTGATCGGCGAAGACATACAACTGACCGCCACGCGCGCGAACTTCTTCAA > SRR4302547.4764490/1‑94 (MQ=60)
CTCGATGATGTGCATGTTATCGCTACTTACAAATCCCGCCCCCTGATCGGCGAAGACATACAACTGACCGCCACGCGCGCGATCTTCTTCAATG < SRR4302547.1111763/94‑1 (MQ=60)
CTCGATGATGTGCATGTTATCGCTACTTACAAAACCCGCATCCTGATCGGCGAAGACATACAACTGACCGCCACGCGCGCGAACTTCTTCAATG > SRR4302547.980821/1‑94 (MQ=60)
CTCGATGATGTGCATGTTATCGCTACTTACAAAACCCGCACCCTGATCGGCGAAGACATACAACTGACCGCCACGCGCGCGAACTTCTTCAATG > SRR4302547.3069008/1‑94 (MQ=60)
CTCGATGATGTGCATGTTATCGCTACTTACAAAACCCGCACCCTGATCGGCGAAGACATACAACTGACCGCCACGCGCGCGAACTTCTTCAATG < SRR4302547.5026119/94‑1 (MQ=60)
TCGATGATGTGCATGTTATCGCTACTTACAAAACCCGCACCCTGATCGGCGAAGACATACAACTGACCGCCACGCGCGCGAACTTCTTCAATGT > SRR4302547.1077762/1‑94 (MQ=60)
TCGATGATGTGCATGTTATCGCTACTTACAAAACCCGCACCCTGATCGGCGAAGACATACAACTGACCGCCACGCGCGCGAACTTCTTCAATGT > SRR4302547.5494230/1‑94 (MQ=60)
TCGATGATGTGCATGTTATCGCTACTTACAAAACCCGCACCCTGATCGGCGAAGACATACAACTGACCGCCACGCGCGCGAACTTCTTCAATGT > SRR4302547.1668407/1‑94 (MQ=60)
CGATGATGTGCATGTTATCGCTACTTACAAAACCCGCATCCTGATCGGCGAAGACATACAACTGACCGCCACGCGCGCGAACTTCTTCAATGTT < SRR4302547.4161247/94‑1 (MQ=60)
CGATGATGTGCATGTTATCGCTACTTACAAAACCCGCACCCTGATCGGCGAAGACATACAACTGACCGCCACGCGCGCGAACTTCTTCAATGTT < SRR4302547.880929/94‑1 (MQ=60)
CGATGATGTGCATGTTATCGCTACTTACAAAACCCGCACCCTGATCGGCGAAGACATACAACTGACCGCCACGCGCGCGAACTTCTTCAATGTT < SRR4302547.6558139/94‑1 (MQ=60)
ATGATGTGCATGTTATCGCTACTTACAAAACCCGCATCCTGATCGGCGAAGACATACAACTGACCGCCACGCGCGCGAACTTCTTCAATGTTGG > SRR4302547.5252157/1‑94 (MQ=60)
TGATGTGCATGTTATCGCTACTTACAAAACCCGCACCCTGATCGGCGAAGACATACAACTGACCGCCACGCGCGCGAACTTCTTCAATGTTGGT > SRR4302547.1594448/1‑94 (MQ=60)
TGATGTGCATGTTATCGCTACTTACAAAACCCGCACCCTGATCGGCGAAGACATACAACTGACCGCCACGCGCGCGAACTTCTTCAATGTTGGA > SRR4302547.5161336/1‑94 (MQ=60)
GATGTGCATGTTATCGCTACTTACAAAACCCGCATCCTGATCGGCGAAGACATACAACTGACCGCCACGCGCGCGAACTTCTTCAATGTTGGAT > SRR4302547.5181264/1‑94 (MQ=60)
GATGTGCATGTTATCGCTACTTACAAAACCCGCACCCTGATCGGCGAAGACATACAACTGACCGCCACGCGCGCGAACTTCTTCAATGTTGGAT > SRR4302547.4061614/1‑94 (MQ=60)
GATGTGCATGTTATCGCTACTTACAAAACCCGCACCCTGATCGGCGAAGACATACAACTGACCGCCACGCGCGCGAACTTCTTCAATGTTGGAT < SRR4302547.1228142/94‑1 (MQ=60)
ATGTGCATGTTATCGCTACTTACAAAACCCGCACCCTGATCGGCGAAGACATACAACTGACCGCCACGCGCGCGAACTTCTTCAATGTTGGATT < SRR4302547.2902996/94‑1 (MQ=60)
ATGTGCATGTTATCGCTACTTACAAAACCCGCACCCTGATCGGCGAAGACATACAACTGACCGCCACGCACGCGAACTTCTTCAATGTTGGATT > SRR4302547.3328024/1‑94 (MQ=60)
TGTGCATGTTATCGCTACTTACAAAACCCGCACCCTGATCGGCGAAGACATACAACTGACCGCCACGCGCGCGAACTTCTTCAATGTTGGATTT > SRR4302547.1684258/1‑94 (MQ=60)
GTGCATGTTATCGCTACTTACAAAACCCGCACCCTGATCGGCGAAGACATACAACTGACCGCCACGCGCGCGAACTTCTTCAATGTTGGATTTC > SRR4302547.5970452/1‑94 (MQ=60)
GTGCATGTTATCGCTACTTACAAAACCCGCACCCTGATCGGCGAAGACATACAACTGACCGCCACGCGCGCGAACTTCTTCAATGTTGGATTTC > SRR4302547.1186896/1‑94 (MQ=60)
GTGCATGTTATCGCTACTTACAAAACCCGCACCCTGATCGGCGAAGACATACAACTGACCGCCACGCGCGCGAACTTCTTCAATGTTGGATTTC > SRR4302547.4431904/1‑94 (MQ=60)
TGCATGTTATCGCTACTTACAAAACCCGCATCCTGATCGGCGAAGACATACAACTGACCGCCACGCGCGCGAACTTCTTCAATGTTGGATTTCA < SRR4302547.5504625/94‑1 (MQ=60)
TGCATGTTATCGCTACTTACAAAACCCGCACCCTGATCGGCGAAGACATACAACTGACCGCCACGCGCGCGAACTTCTTCAATGTTGGATTTCA < SRR4302547.2288494/94‑1 (MQ=60)
TGCATGTTATCGCTACTTACAAAACCCGCACCCTGATCGGCGAAGACATACAACTGACCGCCACGCGCGCGAACTTCTTCAATGTTGGATTTCA > SRR4302547.6280725/1‑94 (MQ=60)
TGCATGTTATCGCTACTTACAAAACCCGCACCCTGATCGGCGAAGACATACAACTGACCGCCACGCGCGCGAACTTCTTCAATGTTGGATTTCA > SRR4302547.2961764/1‑94 (MQ=60)
GCATGTTATCGCTACTTACAAAACCCGCACCCTGATCGGCGAAGACATACAACTGACCGCCACGCGCGCGAACTTCTTCAATGTTGGATTTCAG < SRR4302547.415049/94‑1 (MQ=60)
GCATGTTATCGCTACTTACAAAACCCGCACCCTGATCGGCGAAGACATACAACTGACCGCCACGCGCGCGAACTTCTTCAATGTTGGATTTCAG > SRR4302547.204075/1‑94 (MQ=60)
GCATGTTATCGCTACTTACAAAACCCGCACCCTGATCGGCGAAGACATACAACTGACCGCCACGCGCGCGAACTTCTTCAATGTTGGATTTCAG > SRR4302547.2793753/1‑94 (MQ=60)
GCATGTTATCGCTACTTACAAAACCCGCACCCTGATCGGCGAAGACATACAACTGACCGCCACGCGCGCGAACTTCTTCAATGTTGGATTTCAG < SRR4302547.5908436/94‑1 (MQ=60)
CATGTTATCGCTACTTACAAAACCCGCACCCTGATCGGCGAAGACATACAACTGACCGCCACGCGCGCGAACTTCTTCAATGTTGGATTTCAGT > SRR4302547.6603535/1‑94 (MQ=60)
ATGTTATCGCTACTTACAAAACCCGCACCCTGATCGGCGAAGACATACAACTGACCGCCACGCGCGCGAACTTCTTCAATGTTGGATTTatgtt > SRR4302547.2276971/1‑89 (MQ=60)
ATGTTATCGCTACTTACAAAACCCGCACCCTGATCGGCGAAGACATACAACTGACCGCCACGCGCGCGAACTTCTTCAATGTTGGATTTCAGTT < SRR4302547.570596/94‑1 (MQ=60)
GTTATCGCTACTTACAAAACCCGCATCCTGATCGGCGAAGACATACACCTGACCGCCACGCGCGCGAACTTCTTCAATGTTGGATTTCAGTTTT < SRR4302547.857210/94‑1 (MQ=60)
GTTATCGCTACTTACAAAACCCGCACCCTGATCGGCGAAGACATACAACTGACCGCCACGCGCGCGAACTTCTTCAATGTTGGATTTCAGTTTT < SRR4302547.3350645/94‑1 (MQ=60)
GTTATCGCTACTTACAAAACCCGCACCCTGATCGGCGAAGACATACAACTGACCGCCACGCGCGCGAACTTCTTCAATGTTGGATTTCAGTTTT < SRR4302547.4555237/94‑1 (MQ=60)
TTATCGCTACTTACAAAACCCGCACCCTGATCGGCGAAGACATACAACTGACCGCCACGCGCGCGAACTTCTTCAATGTTGGATTTCAGTTTTT < SRR4302547.2722943/94‑1 (MQ=60)
TATCGCTACTTACAAAACCCGCACCCTGATCGGCGAAGACATACAACTGACCGCCACGCGCGCGAACTTCTTCAATGTTGGATTTCAGTTTTTC > SRR4302547.6252204/1‑94 (MQ=60)
TATCGCTACTTACAAAACCCGCACCCTGATCGGCGAAGACATACAACTGACCGCCACGCGCGCGAACTTCTTCAATGTTGGATTTCAGTTTTTC > SRR4302547.108064/1‑94 (MQ=60)
TATCGCTACTTACAAAACCCGCACCCTGATCGGCGAAGACATACAACTGACCGCCACGCGCGCGAACTTCTTCAATGTTGGATTTCAGTTTTTC > SRR4302547.6026740/1‑94 (MQ=60)
TCGCTACTTACAAAACCCGCATCCTGATCGGCGAAGACATACAACTGACCGCCACGCGCGCGAACTTCTTCAATGTTGGATTTCAGTTTTTCCA < SRR4302547.1765886/94‑1 (MQ=60)
TCGCTACTTACAAAACCCGCACCCTGATCGGCGAAGACATACAACTGACCGCCACGCGCGCGAACTTCTTCAATGTTGGATTTCAGTTTTTCCA > SRR4302547.1993994/1‑94 (MQ=60)
TCGCTACTTACAAAACCCGCACCCTGATCGGCGAAGACATACAACTGACCGCCACGCGCGCGAACTTCTTCAATGTTGGATTTCAGTTTTTCCA < SRR4302547.5270494/94‑1 (MQ=60)
CGCTACTTACAAAACCCGCGCCCTGATCGGCGAAGACATACAACTGACCGCCACGCGCGCGAACTTCTTCAATGTTGGATTTCAGTTTTTCCAG < SRR4302547.3106178/94‑1 (MQ=60)
GCTACTTACAAAACCCGCACCCTGATCGGCGAAGACATACAACTGACCGCCACGCGCGCGAACTTCTTCAATGTTGGATTTCAGTTTTTCCAGC > SRR4302547.3664296/1‑94 (MQ=60)
CTACTTACAAAACCCGCACCCTGATCGGCGAAGACATACAACTGACCGCCACGCGCGCGAACTTCTTCAATGTTGGATTTCAGTTTTTCCAGCA < SRR4302547.5590645/94‑1 (MQ=60)
CTACTTACAAAACCCGCACCCTGATCGGCGAAGACATACAACTGACCGCCACGCGCGCGAACTTCTTCAATGTTGGATTTCAGTTTTTCCAGCA > SRR4302547.3741552/1‑94 (MQ=60)
CTACTTACAAAACCCGCACCCTGATCGGCGAAGACATACAACTGACCGCCACGCGCGCGAACTTCTTCAATGTTGGATTTCAGTTTTTCCAGCA > SRR4302547.6070409/1‑94 (MQ=60)
CTACTTACAAAACCCGCACCCTGATCGGCGAAGACATACAACTGACCGCCACGCGCGCGAACTTCTTCAATGTTGGATTTCAGTTTTTCCAGCA > SRR4302547.6118512/1‑94 (MQ=60)
ACTTACAAAACCCGCACCCTGATCGGCGAAGAGATAAAACTGAGCGCCACGCGCGCGAACTTCTTCAATGTTGGCTTTCAGTTTTTGCAGCAAT > SRR4302547.3770772/1‑94 (MQ=60)
ACTTACAAAACCCGCACCCTGATCGGCGAAGACATACAACTGACCGCCACGCGCGCGAACTTCTTCAATGTTGGATTTCAGTTTTTCCAGCAAT > SRR4302547.2165466/1‑94 (MQ=60)
CTTACAAAACCCGCACCCTGATCGGCGAAGACATACAACTGACCGCCACGCGCGCGAACTTCTTCAATGTTGGATTTCAGTTTTTCCAGCAATT > SRR4302547.4442662/1‑94 (MQ=60)
CTTACAAAACCCGCACCCTGATCGGCGAAGACATACAACTGACCGCCACGCGCGCGAACTTCTTCAATGTTGGATTTCAGTTTTTCCAGCAATT > SRR4302547.3674906/1‑94 (MQ=60)
TTACAAAACCCGCACCCTGATCGGCGAAGACATACAACTGACCGCCACGCGCGCGAACTTCTTCAATGTTGGATTTCAGTTTTTCCAGCAATTC < SRR4302547.2104967/94‑1 (MQ=60)
TACAAAACCCGCACCCTGATCGGCGAAGACATACAACTGACCGCCACGCGCGCGAACTTCTTCAATGTTGGATTTCAGTTTTTCCAGCAATTCG > SRR4302547.3968857/1‑94 (MQ=60)
CAAAACCCGCACCCTGATCGGCGAAGACATACAACTGACCGCCACGCGCGCGAACTTCTTCAATGTTGGATTTCAGTTTTTCCAGCAATTCGTT > SRR4302547.246056/1‑94 (MQ=60)
CAAAACCCGCACCCTGATCGGCGAAGACATACAACTGACCGCCACGCGCGCGAACTTCTTCAATGTTGGATTTCAGTTTTTCCAGCAATTCGTT > SRR4302547.1363762/1‑94 (MQ=60)
CAAAACCCGCACCCTGATCGGCGAAGACATACAACTGACCGCCACGCGCGCGAACTTCTTCAATGTTGGATTTCAGTTTTTCCAGCAATTCGTT < SRR4302547.5921225/94‑1 (MQ=60)
AAAACCCGCACCCTGATCGGCGAAGACATACAACTGACCGCCACGCGCGCGAACTTCTTCAATGTTGGATTTCAGTTTTTCCAGCAATTCGTTG > SRR4302547.4985594/1‑94 (MQ=60)
AAACCCGCACCCTGATCGGCGAAGACATACAACTGACCGCCACGCGCGCGAACTTCTTCAATGTTGGATTTCAGTTTTTCCAGCAATTCGTTGT < SRR4302547.4240659/94‑1 (MQ=60)
AAACCCGCACCCTGATCGGCGAAGACATACAACTGACCGCCACGCGCGCGAACTTCTTCAATGTTGGATTTCAGTTTTTCCAGCAATTCGTTGT > SRR4302547.6739678/1‑94 (MQ=60)
AACCCGCACCCTGATCGGCGAAGACATACAACTGACCGCCACGCGCGCGAACTTCTTCAATGTTGGATTTCAGTTTTTCCAGCAATTCGTTGTT < SRR4302547.4010880/94‑1 (MQ=60)
CCCGCATCCTGATCGGCGAAGACATACAACTGACCGCCACGCGCGCGAACTTCTTCAATGTTGGATTTCAGTTTTTCCAGCAATTCGTTGTTCG < SRR4302547.6159604/94‑1 (MQ=60)
CCCGCACCCTGATCGGCGAAGACATACAACTGACCGCCACGCGCGCGAACTTCTTCAATGTTGGATTTCAGTTTTTCCAGCAATTCGTTGTTCG > SRR4302547.739841/1‑94 (MQ=60)
CCGCATCCTGATCGGCGAAGACATACAACTGACCGCCACGCGCGCGAACTTCTTCAATGTTGGATTTCAGTTTTTCCAGCAATTCGTTGTTCGG > SRR4302547.2263779/1‑94 (MQ=60)
CCGCACCCTGATCGGCGAAGACATACAACTGACCGCCACGCGCGCGAACTTCTTCAATGTTGGATTTCAGTTTTTCCAGCAATTCGTTGTTCGG > SRR4302547.4647979/1‑94 (MQ=60)
CGCACCCTGATCGGCGAAGACATACAACTGACCGCCACGCGCGCGAACTTCTTCAATGTTGGATTTCAGTTTTTCCAGCAATTCGTTGTTCGGT > SRR4302547.4199030/1‑94 (MQ=60)
CGCACCCTGATCGGCGAAGACATACAACTGACCGCCACGCGCGCGAACTTCTTCAATGTTGGATTTCAGTTTTTCCAGCAATTCGTTGTTCGGT > SRR4302547.3592026/1‑94 (MQ=60)
GCACCCTGATCGGCGAAGACATACAACTGACCGGCAAGCGCGCGAACTTCTTCAATGCTGGATTTAAGTTTTTCAAGCAATTCGTTGTTCGGTG > SRR4302547.4512358/1‑94 (MQ=60)
GCACCCTGATCGGCGAAGACATACAACTGACCGCCACGCGCGCGAACTTCTTCAATGTTGGATTTCAGTTTTTCCAGCAATTCGTTGTTCGGTG < SRR4302547.5860929/94‑1 (MQ=60)
CATCCTGATCGGCGAAGACATACAACTGACCGCCACGCGCGCGAACTTCTTCAATGTTGGATTTCAGTTTTTCCAGCAATTCGTTGTTCGGTGC > SRR4302547.2091922/1‑94 (MQ=60)
CACCCTGATCGGCGAAGACATACAACTGACCGCCACGCGCGCGAACTTCTTCAATGTTGGATTTCAGTTTTTCCAGCAATTCGTTGTTCGGTGC > SRR4302547.4075094/1‑94 (MQ=60)
CACCCTGATCGGCGAAGACATACAACTGACCGCCACGCGCGCGAACTTCTTCAATGTTGGATTTCAGTTTTTCCAGCAATTCGTTGTTCGGTGC > SRR4302547.4389330/1‑94 (MQ=60)
CACCCTGATCGGCGAAGACATACAACTGACCGCCACGCGCGCGAACTTCTTCAATGTTGGATTTCAGTTTTTCCAGCAATTCGTTGTTCGGTGC > SRR4302547.5686533/1‑94 (MQ=60)
ATCCTGATCGGCGAAGACATACAACTGACCGCCACGCGCGCGAACTTCTTCAATGTTGGATTTCAGTTTATCCAGCAATTCGTTGTTCGGTGCA > SRR4302547.6658902/1‑94 (MQ=60)
ACCCTGATCGGCGAAGACATACAACTGACCGCCACGCGCGCGAACTTCTTCAATGTTGGATTTCAGTTTTTCCAGCAATTCGTTGTTCGGTGCA > SRR4302547.5222780/1‑94 (MQ=60)
CCCTGATCGGCGAAGACATACAACTGACCGCCACGCGCGCGAACTTCTTCAATGTTGGATTTCAGTTTTTCCAGCAATTCGTTGTTCGGTGCAA > SRR4302547.3996632/1‑94 (MQ=60)
CCCTGATCGGCGAAGACATACAACTGACCGCCACGCGCGCGAACTTCTTCAATGTTGGATTTCAGTTTTTCCAGCAATTCGTTGTTCGGTGCAA > SRR4302547.3271229/1‑94 (MQ=60)
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TGCAGCGGAACGGTGTAGAAGATCGGTGCAATCACCTCTTCCACATGCGGCATCTCGATGATGTGCATGTTATCGCTACTTACAAAACCCGCATCCTGATCGGCGAAGACATACAACTGACCGCCACGCGCGCGAACTTCTTCAATGTTGGATTTCAGTTTTTCCAGCAATTCGTTGTTCGGTGCAA > NC_000913/3909552‑3909738
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 10 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
