Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
593 |
264.2 |
13311096 |
97.8% |
13018251 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,923,268 |
T→C |
intergenic (‑7/+372) |
gidA ← / ← mioC |
glucose‑inhibited division/MioC |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,923,268 | 0 | T | C | 82.4%
| 592.5
/ 126.8
| 256 | intergenic (‑7/+372) | gidA/mioC | glucose‑inhibited division/MioC |
| Reads supporting (aligned to +/- strand): ref base T (21/24); new base C (97/114); total (118/138) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.14e-01 |
Only 100 of 262 total aligned reads displayed.
CCCATACGCGCCGCGGCCATCGCGGCCTCGGTGCCTGCATGACCCCCGCCAATGATGATGACGTCAAAAGGATCCGGATAAAACATGGTGATTGCCTCGCATAACGCGGTATGAAAATGGATTGAAGCCCGGGCCGTGGATTCTACTCAACTTTGTCGGCTTGAGAAAGACCTGGGATCCTGGG > NC_000913/3923176‑3923359
|
cATACGGGCCGCGGCCATCGCGGCCTCGGTGCCTGCATGACCCCCGCCAATGATGATGACGTCAAAAGGATCCGGATAAAACATGGTGATCGc < 2:4441035/93‑1 (MQ=255)
aTACGCGCCGCGGCCATCGCGGCCTCGGTGCCTGCATGACCCCCGCCAATGATGATGACGTCAAAAGGATCCGGATAAAACATGGTGATCGcc > 2:4164121/1‑93 (MQ=255)
tACGCGCCGCGGCCATCGCGGCCTCGGTGCCTGCATGACCCCCGCCAATGATGATGACGTCAAAAGGATCCGGATAAAACATGGTGATCGCCt > 2:2136062/1‑93 (MQ=255)
gccgcGGCCATCGCGGCCTCGGTGCCTGCATGACCCCCGCCAATGATGATGACGTCAAAAGGATCCGGATAAAACATGGTGATCGCCTCGCAt > 2:4311468/1‑93 (MQ=255)
gcgGCCATCGCGGCCTCGGTGCCTGCATGACCCCCGCCAATGATGATGACGTCAAAAGGATCCGGATAAAACATGGTGATCGCCTCGCATAAc < 2:2742887/93‑1 (MQ=255)
gcgGCCATCGCGGCCTCGGTGCCTGCATGACCCCCGCCAATGATGATGACGTCAAAAGGATCCGGATAAAACATGGTGATCGCCTCGCATAAc > 2:3966934/1‑93 (MQ=255)
gcgGCCATCGCGGCCTCGGTGCCTGCATGACCCCCGCCAATGATGATGACGTCAAAAGGATCCGGATAAAACATGGTGATCGCCTCGCATAAc > 2:1684307/1‑93 (MQ=255)
gcgGCCATCGCGGCCTCGGTGCCTGCATGACCCCCGCCAATGATGATGACGTCAAAAGGATCCGGATAAAACATGGTGATCGCCTCGCATAAc > 1:2616523/1‑93 (MQ=255)
cgGCCATCGCGGCCTCGGTGCCTGCATGACCCCCGCCAATGATGATGACGTCAAAAGGATCCGGATAAAACATGGTGATCGCCTCGCATAAcg > 1:4943198/1‑93 (MQ=255)
cgGCCATCGCGGCCTCGGTGCCTGCATGACCCCCGCCAATGATGATGACGTCAAAAGGATCCGGATAAAACATGGTGATCGCCTCGCATAAcg > 2:948386/1‑93 (MQ=255)
ggCCATCGCGGCCTCGGTGCCTGCATGACCCCCGCCAATGATGATGACGTCAAAAGGATCCGGATAAAACATGGTGATCGCCTCGCATAAcgc > 2:6374959/1‑93 (MQ=255)
ccATCGCGGCCTCGGTGCCTGCATGACCCCCGCCAATGATGATGACGTCAAAAGGATCCGGATAAAACATGGTGATCGCCTCGCATAACGCgg < 2:1397930/93‑1 (MQ=255)
cATCGCGTCCTCGGTGCCTGCATGACCCCCGCCAATGATGATGACGTCAAAAGGATCCGGATAAAACATGGTGATCGCCTCGCATAACGCGGt < 2:3375276/93‑1 (MQ=255)
cATCGCGGCCTCGGTGCCTGCATGACCCCCGCCAATGATGATGACGTCAAAAGGATCCGGATAAAACATGGTGATCGCCTCGCATAACGCGGt < 1:5671917/93‑1 (MQ=255)
ggtccTCCGTGCCTGCAGGACCCCCGCCAATGATGATGACGTCAAAAGGATCCGGATAAAACATGGTGATCGCCTCGCATAACGCGGTATGaa < 2:226632/90‑1 (MQ=255)
cgGCCTCGGTGCCTGCATGACCCCCGCCAATGATGATGACGTCAAAAGGATCCGGATAAAACATGGTGATCGCCTCGCATAACGCGGTATGaa > 1:5634708/1‑93 (MQ=255)
ggCCTGGGTGCCTGCATGACCCCCGCCAATGATGATGACGTCAAAAGGATCCGGATAAAACATGGTGATCGCCTCGCATAACGCGGTATGaaa < 1:4327651/93‑1 (MQ=255)
ggCCTCGGTGCCTGCATGACCCCCGCCAATGATGATGACGTCAAAAGGATCCGGATAAAACATGGTGATTGCCTCGCATAACGCGGTATGaaa > 1:2328069/1‑93 (MQ=255)
gCCTCGGTGCCTGCATGACCCCCGCCAATGATGATGACGTCAAAAGGATCCGGATAAAACATGGTGATTGCCTCGCATAACGCGGTATGaaaa < 2:1848163/93‑1 (MQ=255)
ccTCGGTGCCTGCATGACCCCCGCCAATGATGATGACGTCAAAAGGATCCGGATAAAACATGGTGATCGCCTCGCATAACGCGGTATGAAAAt < 1:2715791/93‑1 (MQ=255)
cTCGGTGCCTGCATGACCCCCGCCAATGATGATGACGTCAAAAGGATCCGGATAAAACATGGTGATTGCCTCGCATAACGCGGTATGAAAATg > 2:4196778/1‑93 (MQ=255)
cTCGGTGCCTGCATGACCCCCGCCAATGATGATGACGTCAAAAGGATCCGGATAAAACATGGTGATTGCCTCGCATAACGCGGTATGAAAATg < 2:2396695/93‑1 (MQ=255)
ggTGCCTGCATGCCCCCCGCCAATGATGATGACGTCAAAAGGATCCGGATAAAACATGGTGATCGCCTCGCATAACGCGGTATGAAAATGGAt < 1:3720298/93‑1 (MQ=255)
ggTGCCTGCATGACCCCCGCCAATGATGATGACGTCAAAAGGATCCGGATAAAACATGGTGATCGCCTCGCATAACGCGGTATGAAAATGGAt < 1:5776322/93‑1 (MQ=255)
gTGCCTGCATGACCCCCGCCAATGATGATGACGTCAAAAGGATCCGGATAAAACATGGTGATTGCCTCGCATAACGCGGTATGAAAATGGAtt > 1:1959454/1‑93 (MQ=255)
gTGCCGGCATGACCCCCGCCAATGATGATGACGTCAAAAGGATCCGGATAAAACATGGTGATCGCCTCGCATAACGCGGTATGAAAATGGAtt < 2:82391/93‑1 (MQ=255)
gCCTGCATGACCCCCGCCAATGATGATGACGTCAAAAGGATCCGGATAAAACATGGTGATTGCCTCGCATAACGCGGTATGAAAATGGATTGa > 2:300914/1‑93 (MQ=255)
ccTGTATGACCCCCGCCAATGATGATGACGTCAAAAGGATCCGGATAAAACATGGTGATCGCCTCGCATAACGCGGTATGAAAATGGATTGaa < 2:5232401/93‑1 (MQ=255)
cTGCATGACCCCCGCCAATGATGATGACGTCAAAAGGATCCGGATAAAACATGGTGATCGCCTCGCATAACGCGGTATGAAAATGGATTGAAg < 2:151521/93‑1 (MQ=255)
tGCATGACCCCCGCCAATGATGATGACGTCAAAAGGATCCGGATAAAACATGGTGATTGCCTCGCATAACGCGGTATGAAAATGGATTGAAGc > 1:6516520/1‑93 (MQ=255)
tGCATGACCCCCGCCAATGATGATGACGTCAAAAGGATCCGGATAAAACATGGTGATTGCCTCGCATAACGCGGTATGAAAATGGATTGAAGc < 2:5080677/93‑1 (MQ=255)
gCATGACCCCCGCCAATGATGATGACGTCAAAAGGATCCGGATAAAACATGGTGATCGCCTCGCATAACGCGGTATGAAAATGGATTGAAGcc < 2:280690/93‑1 (MQ=255)
gCATGACCCCCGCCAATGATGATGACGTCAAAAGGATCCGGATAAAACATGGTGATCGCCTCGCATAACGCGGTATGAAAATGGATTGAAGcc < 1:4344341/93‑1 (MQ=255)
gCATGACCCCCGCCAATGATGATGACGTCAAAAGGATCCGGATAAAACATGGTGATCGCCTCGCATAACGCGGTATGAAAATGGATTGAAGcc < 1:4901213/93‑1 (MQ=255)
gCATGACCCCCGCCAATGATGATGACGTCAAAAGGATCCGGATAAAACATGGTGATCGCCTCGCATAACGCGGTATGAAAATGGATTGAAGcc > 1:1392348/1‑93 (MQ=255)
ataccccccGCCAATGATGATGACGTCAAAAGGATCCGGATAAAACATGGTGATCGCCTCGCATAACGCGGTATGAATATGGATTGAAGCCCg < 1:1663523/89‑1 (MQ=255)
aTGACCCGCGCCAATGATGATGACGTCAAAAGGATCCGGATAAAACATGGTGATCGCCTCGCATAACGCGGTATGAAAATGGATTGAAGGCCg < 1:2888829/93‑1 (MQ=255)
aTGACCCCCGCCAATGATGATGACGTCAAAAGGATCCGGATAAAACATGGTGATCGCCTCGCATAACGCGGTATGAAAATGGATTGAAGCCCg < 1:4659000/93‑1 (MQ=255)
aTGACCCCCGCCAATGATGATGACGTCAAAAGGATCCGGATAAAACATGGTGATCGCCTCGCATAACGCGGTATGAAAATGGATTGAAGCCCg < 2:1053375/93‑1 (MQ=255)
aTGACCCCCGCCAATGATGATGACGTCAAAAGGATCCGGATAAAACATGGTGATCGCCTCGCATAACGCGGTATGAAAATGGATTGAAGCCCg < 2:4925615/93‑1 (MQ=255)
tGACCCCCGCCAATGATGATGACGTCAAAAGGATCCGGATAAAACATGGTGATCGCCTCGCATAACGCGGTATGAAAATGGATTGAAGCCCgg < 1:4762957/93‑1 (MQ=255)
gACCCCCGCCAATGATGATGACGTCAAAAGGATCCGGATAAAACATGGTGATCGCCTCGCATAACGCGGTATGAAAATGGATTGAAGCCCggg < 2:2534493/93‑1 (MQ=255)
ccccccGCCAATGATGATGACGTCAAAAGGATCCGGATAAAACATGGTGATCGCCTCGCATAACGCGGTATGAAAATGGATTGAAGCCCGGGc < 1:6197926/92‑1 (MQ=255)
cccccGCCAATGATGATGACGTCAAAAGGATCCGGATAAAACATGGTGATCGCCTCGCATAACGCGGTATGAAAATGGATTGAAGCCCGGGcc < 1:10066/93‑1 (MQ=255)
ccccGCCAATGATGATGACGTCAAAAGGATCCGGATAAAACATGGTGATTGCCTCGCATAACGCGGTATGAAAATGGATTGAAGCCCGGGCCg > 1:1416032/1‑93 (MQ=255)
ccccGCCAATGATGATGACGTCAAAAGGATCCGGATAAAACATGGTGATCGCCTCGCATAACGCGGTATGAAAATGGATTGAAGCCCGGGCCg > 2:3638768/1‑93 (MQ=255)
ccccGCCAATGATGATGACGTCAAAAGGATCCGGATAAAACATGGTGATCGCCTCGCATAACGCGGTATGAAAATGGATTGAAGCCCGGGCCg > 1:2837280/1‑93 (MQ=255)
ccccGCCAATGATGATGACGTCAAAAGGATCCGGATAAAACATGGTGATCGCCTCGCATAACGCGGTATGAAAATGGATTGAAGCCCGGGCCg < 2:1596712/93‑1 (MQ=255)
cGCCAATGATGATGACGTCAAAAGGATCCGGATAAAACATGGTGATTGCCTCGCATAACGCGGTATGAAAATGGATTGAAGCCCGGGCCGTgg > 1:6613766/1‑93 (MQ=255)
cAATGATGATGACGTCAAAAGGATCCGGATAAAACATGGTGATTGCCTCGCATAACGCGGTATGAAAATGGATTGAAGCCCGGGCCGTGGAtt < 1:591196/93‑1 (MQ=255)
cAATGATGATGACGTCAAAAGGATCCGGATAAAACATGGTGATCGCCTCGCATAACGCGGTATGAAAATGGATTGAAGCCCGGGCCGTGGAtt < 2:497923/93‑1 (MQ=255)
cAATGATGATGACGTCAAAAGGATCCGGATAAAACATGGTGATCGCCTCGCATAACGCGGTATGAAAATGGATTGAAGCCCGGGCCGTGGAtt > 1:861165/1‑93 (MQ=255)
cAATGATGATGACGTCAAAAGGATCCGGATAAAACATGGTGATCGCCTCGCATAACGCGGTATGAAAATGGATTGAAGCCCGGGCCGTGGAtt < 1:3833347/93‑1 (MQ=255)
aaTGATGATGACGTCAGAAGGATCAGGATAAAACATGGAGATTGCCTCGCATAACGTGGTATGAAAATGGATTGAAGCCCGGGCCGTGGATTc < 1:4182735/93‑1 (MQ=255)
aaTGATGATGACGTCAAAAGGATCCGGATAAAACATGGTGATTGCCTCGCATAACGCGGTATGAAAATGGATTGAAGCCCGGGCCGTGGATTc < 2:5678235/93‑1 (MQ=255)
aaTGATGATGACGTCAAAAGGATCCGGATAAAACATGGTGATCGCCTCGCATAACGCGGTATGAAAATGGATTGAAGCCCGGGCCGTGGATTc > 2:1180893/1‑93 (MQ=255)
aaTGATGATGACGTCAAAAGGATCCGGATAAAACATGGTGATCGCCTCGCATAACGCGGTATGAAAATGGATTGAAGCCCGGGCCGTGGATTc < 2:2950606/93‑1 (MQ=255)
aaTGATGATGACGTCAAAAGGATCCGGATAAAACATGGTGATCGCCTCGCATAACGCGGTATGAAAATGGATTGAAGCCCGGGCCGTGGATTc > 1:3415851/1‑93 (MQ=255)
atgatgatgACGTCAAAAGGATCCGGATAAAACATGGTGATTGCCTCGCATAACGCGGTATGAAAATGGATTGAAGCCCGGGCCGTGGATTCt > 2:3714749/1‑93 (MQ=255)
atgatgatgACGTCAAAAGGATCCGGATAAAACATGGTGATCGCCTCGCATAACGCGGTATGAAAATGGATTGAAGCCCGGGCCGTGGATTCt > 1:3294165/1‑93 (MQ=255)
gatgatgaCGTCAAAAGGATCCGGATAAAACATGGTGATTGCCTCGCATAACGCGGTATGAAAATGGATTGAAGCCCGGGCCGTGGATTCTAc > 1:1208500/1‑93 (MQ=255)
gatgatgaCGTCAAAAGGATCCGGATAAAACATGGTGATCGCCTCGCATAACGCGGTATGAAAATGGATTGAAGCCCGGGCCGTGGATTCTAc < 2:4073090/93‑1 (MQ=255)
gatgatgaCGTCAAAAGGATCCGGATAAAACATGGTGATCGCCTCGCATAACGCGGTATGAAAATGGATTGAAGCCCGGGCCGTGGATTCTAc < 2:3818073/93‑1 (MQ=255)
tgatgaCGTCAAAAGGATCCGGATAAAACATGGTGATCGCCTCGCATAACGCGGTATGAAAATGGATTGAAGCCCGGGCCGTGGATTCTACTc > 2:6055073/1‑93 (MQ=255)
atgaCGTCAAAAGGATCCGGATAAAACATGGTGATCGCCTCGCATAACGCGGTATGAAAATGGATTGAAGCCCGGGCCGTGGATTCTACTCaa < 2:6131903/93‑1 (MQ=255)
atgaCGTCAAAAGGATCCGGATAAAACATGGTGATCGCCTCGCATAACGCGGTATGAAAATGGATTGAAGCCCGGGCCGTGGATTCTACTCaa > 2:5511891/1‑93 (MQ=255)
gaCGTCAAAAGGATCCGGATAAAACATGGTGATCGCCTCGCATAACGCGGTATGAAAATGGATTGAAGCCCGGGCCGTGGATTCTACTCAACt < 1:4527655/93‑1 (MQ=255)
cAAAAGGATCCGGATAAAACATGGTGATCGCCTCGCATAACGCGGTATGAAAATGGATTGAAGCCCGGGCCGTGGATTCTACTCAACTTTGTc > 1:2200218/1‑93 (MQ=255)
aaaaGGATCCGGATAAAACATGGTGATCGCCTCGCATAACGCGGTATGAAAATGGATTGAAGCCCGGGCCGTGGATTCTACTCAACTTTGTCg > 1:5426571/1‑93 (MQ=255)
aaaGGATCCGGATAAAACATGGTGATCGCCTCGCATAACGCGGTATGAAAATGGATTGAAGCCCGGGCCGTGGATTCTACTCAACTTTGTCgg > 1:182382/1‑93 (MQ=255)
aaaGGATCCGGATAAAACATGGTGATCGCCTCGCATAACGCGGTATGAAAATGGATTGAAGCCCGGGCCGTGGATTCTACTCAACTTTGTCgg > 2:468619/1‑93 (MQ=255)
aaaGGATCCGGATAAAACATGGTGATCGCCTCGCATAACGCGGTATGAAAATGGATTGAAGCCCGGGCCGTGGATTCTACTCAACTTTGTCgg < 2:3994885/93‑1 (MQ=255)
aaaGGATCCGGATAAAACATGGTGATCGCCTCGCATAACGCGGTATGAAAATGGATTGAAGCCCGGGCCGTGGATTCTACTCAACTTTGTCgg < 1:5523134/93‑1 (MQ=255)
aaGGATCCGGATAAAACATGGTGATTGCCTCGCATAACGCGGTATGAAAATGGATTGAAGCCCGGGCCGTGGATTCTACTCAACTTTGTCGGc < 2:2539561/93‑1 (MQ=255)
ggATCCGGATAAAACATGGTGATCGCCTCGCATAACGCGGTATGAAAATGGATTGAAGCCCGGGCCGTGGATTCTACTCAACTTTGTCGGCtt > 1:6182396/1‑93 (MQ=255)
ggATCCGGATAAAACATGGTGATCGCCTCGCATAACGCGGTATGAAAATGGATTGAAGCCCGGGCCGTGGATTCTACTCAACTTTGTCGGCtt > 2:2467088/1‑93 (MQ=255)
gATCCGGATAAAACATGGTGATCGCCTCGCATAACGCGGTATGAAAATGGATTGAAGCCCGGGCCGTGGATTCTACTCAACTTTGTCGGCTTg > 2:6258798/1‑93 (MQ=255)
gATCCGGATAAAACATGGTGATCGCCTCGCATAACGCGGTATGAAAATGGATTGAAGCCCGGGCCGTGGATTCTACTCAACTTTGTCGGCTTg < 1:405682/93‑1 (MQ=255)
aTCCGGATAAAACATGGTGATCGCCTCGCATAACGCGGTATGAAAATGGATTGAAGCCCGGGCCGTGGATTCTACTCAACTTTGTCGGCTTga > 2:4894342/1‑93 (MQ=255)
ccGGATAAAACATGGTGATCGCCTCGCATAACGCGGTATGAAAATGGATTGAAGCCCGGGCCGTGGATTCTACTCAACTTTGTCGGCTTgaga > 1:6383531/1‑93 (MQ=255)
cGGATAAAACATGGTGATCGCCTCGCATAACGCGGTATGAAAATGGATTGAAGCCCGGGCCGTGGATTCTACTCAACTTTGTCGGCTTGAGaa > 2:810812/1‑93 (MQ=255)
cGGATAAAACATGGTGATCGCCTCGCATAACGCGGTATGAAAATGGATTGAAGCCCGGGCCGTGGATTCTACTCAACTTTGTCGGCTTGAGaa < 1:3984532/93‑1 (MQ=255)
ggATAAAACATGGTGATTGCCTCGCATAACGCGGTATGAAAATGGATTGAAGCCCGGGCCGTGGATTCTACTCAACTTTGTCGGCTTGAGaaa > 1:2684120/1‑93 (MQ=255)
ggATAAAACATGGTGATCGCCTCGCATAACGCGGTATGAAAATGGATTGAAGCCCGGGCCGTGGATTCTACTCAACTTTGTCGGCTTGAGaaa > 1:5988641/1‑93 (MQ=255)
aTAAAACATGGTGATCGCCTCGCATAACGCGGTATGAAAATGGATTGAAGCCCGGGCCGTGGATTCTACTCAACTTTGTCGGCTTGAGAAAGa < 2:4717548/93‑1 (MQ=255)
tAAAACATGGTGATCGCCTCGCATAACGCGGTATGAAAATGGATTGAAGCCCGGGCCGTGGATTCTACTCAACTTTGTCGGCTTGAGAAAGAc < 1:2986141/93‑1 (MQ=255)
aaaaCATGGTGATCGCCTCGCATAACGCGGTATGAAAATGGATTGAAGCCCGGGCCGTGGATTCTACTCAACTTTGTCGGCTTGAGAAAGAcc < 2:6575581/93‑1 (MQ=255)
aaaCATGGTGATCGCCTCGCATAACGCGGTATGAAAATGGATTGAAGCCCGGGCCGTGGATTCTACTCAACTTTGTCGGCTTGAGAAAGACCt > 2:5921149/1‑93 (MQ=255)
aaCATGGTGATCGCCTCGCATAACGCGGTATGAAAATGGATTGAAGCCCGGGCCGTGGATTCTACTCAACTTTGTCGGCTTGAGAAAGACCTg < 2:5346570/93‑1 (MQ=255)
aaCATGGTGATCGCCTCGCATAACGCGGTATGAAAATGGATTGAAGCCCGGGCCGTGGATTCTACTCAACTTTGTCGGCTTGAGAAAGACCTg < 2:1347405/93‑1 (MQ=255)
aaCATGGTGATCGCCTCGCATAAAGCGGTATGAAAATGGATTGAAGCCCGGGCCGTGGATTCTACTCAACTTTGTCGGCTTGAGAAAGACCTg > 1:3666990/1‑93 (MQ=255)
aCATGGTGATCGCCTCGCATAACGCGGTATGAAAATGGATTGAAGCCCGGGCCGTGGATTCTACTCAACTTTGTCGGCTTGAGAAAGACCTgg < 1:4894981/93‑1 (MQ=255)
aCATGGTGATCGCCTCGCATAACGCGGTATGAAAATGGATTGAAGCCCGGGCCGTGGATTCTACTCAACTTTGTCGGCTTGAGAAAGACCTgg < 1:5721977/93‑1 (MQ=255)
aCATGGTGATCGCCTCGCATAACGCGGTATGAAAATGGATTGAAGCCCGGGCCGTGGATTCTACTCAACTTTGTCGGCTTGAGAAAGAACTgg > 1:5107040/1‑93 (MQ=255)
aTGGTGATCGCCTCGCATAACGCGGTATGGAAATGGATTGAAGCCCGGGCCGTGGATTCTACTCAACTTTGTCGGCTTGAGAAAGACCTGGGa > 1:5832341/1‑93 (MQ=255)
aTGGTGATCGCCTCGCATAACGCGGTATGAAAATGGATTGAAGCCCGGGCCGTGGATTCTACTCAACTTTGTCGGCTTGAGAAAGACCTGGGa < 2:4561466/93‑1 (MQ=255)
tGGTGATCGCCTCGCATAACGCGGTATGAAAATGGATTGAAGCCCGGGCCGTGGATTCTACTCAACTTTGTCGGCTTGAGAAAGACCTGGGAt < 2:2482148/93‑1 (MQ=255)
gTGATCGCCTCGCATAACGCGGTATGAAAATGGATTGAAGCCCGGGCCGTGGATTCTACTCAACTTTGTCGGCTTGAGAAAGACCTGGGATcc < 1:5264621/93‑1 (MQ=255)
gATCGCCTCGCATAACGCGGTATGAAAATGGATTGAAGCCCGGGCCGTGGATTCTACTCAACTTTGTCGGCTTGAGAAAGACCTGGGATCCTg < 2:1811877/93‑1 (MQ=255)
ttGCCTCGCATAACGCGGTATGAAAATGGATTGAAGCCCGGGCCGTGGATTCTACTCAACTTTGTCGGCTTGAGAAAGACCTGGGATCCTggg < 2:2083923/93‑1 (MQ=255)
|
CCCATACGCGCCGCGGCCATCGCGGCCTCGGTGCCTGCATGACCCCCGCCAATGATGATGACGTCAAAAGGATCCGGATAAAACATGGTGATTGCCTCGCATAACGCGGTATGAAAATGGATTGAAGCCCGGGCCGTGGATTCTACTCAACTTTGTCGGCTTGAGAAAGACCTGGGATCCTGGG > NC_000913/3923176‑3923359
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
ACCCATACGCGCCGCGGCCATCGCGGCCTCGGTGCCTGCATGACCCCCGCCAATGATGATGACGTCAAAAGGATCCGGATAAAACATGGTGATTGCCTCGCATAACGCGGTATGAAAATGGATTGAAGCCCGGGCCGTGGATTCTACTCAACTTTGTCGGCTTGAGAAAGACCTGGGATCCTGGGTA > NC_000913/3923175‑3923361
|
ACCCATACGCGCCGCGGCCATCGCGTCCTCGGTGCCTGCATGACCCCCGCCAATGATGATGACGTCAAAAGGATCCGGATAAAACATGGTGATC < SRR4302547.775702/94‑1 (MQ=60)
ACCCATACGCGCCGCGGCCATCGCGGCCTCGGTGCCTGCATGACCCCCGCCAATGATGATGACGTCAAAAGGATCCGGATAAAACATGGTGATT > SRR4302547.3358976/1‑94 (MQ=60)
ACCCATACGCGCCGCGGCCATCGCGGCCTCGGTGCCTGCATGACCCCCGCCAATGATGATGACGTCAAAAGGATCCGGATAAAACATGGTGATC < SRR4302547.2605370/94‑1 (MQ=60)
ACCCATACGCGCCGCGGCCATCGCGGCCTCGGTGCCTGCATGACCCCCGCCAATGATGATGACGTCAAAAGGAGCCGGATAAAACATGGTGATC < SRR4302547.6616126/94‑1 (MQ=60)
ACCCATACGCGCCGCGACCATCGCGGCCTCGGTGCCTGCATGACCCCCGCCAATGATGATGACGTCAAAAGGATCCGGATAAAACATGGTGATC < SRR4302547.2699465/94‑1 (MQ=60)
ACCCACACGCGCCGCGGCCATCGCGCCCTCGGTGCCTGCATGACCCCCGCCAATGATGATGACGTCAAAAGGATCCGGATAAAACATGGTGATC < SRR4302547.5807664/94‑1 (MQ=60)
attATACGCGCCGCGGCCATCGCGGCCTCGGTGCCTGCATGACCCCCGCCAATGATGATGACGTCAAAAGGATCCGGATAAAACATGGTGATCG < SRR4302547.2669139/91‑1 (MQ=60)
CCCATACGCGCCGCGGCCATCGCGGCCTCGGTGCCTGCATGACCCCCGCCAATGATGATGACGTCAAAAGGATCCGGATAAAACATGGTGATCG > SRR4302547.97201/1‑94 (MQ=60)
CATACGCGCCGCGGCCATCGCGGCCTCGGTGCCTGCATGACCCCCGCCAATGATGATGACGTCAAAAGGATCCGGATAAAACATGGTGATCGCC > SRR4302547.6204676/1‑94 (MQ=60)
ATACGCGCCGCGGCCATCGCGTCCTCGGTGCCTGCATGACCCCCGCCAATGATGATGACGTCAAAAGGATCCGGATAAAACATGGTGATTGCCT < SRR4302547.238752/94‑1 (MQ=60)
ATACGCGCCGCGGCCATCGCGGCCTCGGTGCCTGCATGACCCCCGCCAATGATGATGACGTCAAAAGGATCCGGATAAAACATGGTGATCGCCT < SRR4302547.597231/94‑1 (MQ=60)
TGCGCGCCGCGGCCATCGCGTCCTCGGTGCCTGCATGACCCCCGCCAATGATGATGACGTCAAAAGGATCCGGATAAAACATGGTGATTGCCTC < SRR4302547.2187276/94‑1 (MQ=60)
TACGCGCCGCGGCCATCGCGGCCTCGGTGCCTGCATGACCCCCGCCAATGATGATGACGTCAAAAGGATCCGGATAAAACATGGTGATCGCCTC < SRR4302547.4931396/94‑1 (MQ=60)
ACGCGCCGCGGCCATCGCGGCCTCGGTGCCTGCATGACCCCCGCCAATGATGATGACGTCAAAAGGATCCGGATAAAACATGGTGATCGCCTCG < SRR4302547.747513/94‑1 (MQ=60)
ACGCGCCGCGGCCATCGCGGCCTCGGTGCCTGCATGACCCCCGCCAATGATGATGACGTCAAAAGGATCCGGATAAAACATGGTGATCGCCTCG > SRR4302547.4692608/1‑94 (MQ=60)
CGCGCCGCGGCCATCGCGGCCTCGGTGCCTGCATGACCCCCGCCAATGATGATGACGTCAAAAGGATCCGGATAAAACATGGTGATTGCCTCGC < SRR4302547.5904271/94‑1 (MQ=60)
GCGCCGCGGCCATCGCGGCCTCGGTGCCTGCATGACCCCCGCCAATGATGATGACGTCAAAAGGATCCGGATAAAACATGGTGATCGCCTCGCA < SRR4302547.604537/94‑1 (MQ=60)
GCGCCGCGGCCATCGCGGCCTCGGTGCCTGCATGACCCCCGCCAATGATGATGACGTCAAAAGGATCCGGATAAAACATGGTGATCGCCTCGCA > SRR4302547.5190676/1‑94 (MQ=60)
GCGCCGCGGCCATCGCGGCCTCGGTGCCTGCATGACCCCCGCCAATGATGATGACGTCAAAAGGATCCGGATAAAACATGGTGATCGCCTCGCA > SRR4302547.2777426/1‑94 (MQ=60)
CGCCGCGGCCATCGCGTCCTCGGTGCCTGCATGACCCCCGCCAATGATGATGACGTCAAAAGGATCCGGATAAAACATGGTGATCGCCTCGCAT < SRR4302547.1631794/94‑1 (MQ=60)
CGCCGCGGCCATCGCGGCCTCGGTGCCTGCATGACCCCCGCCAATGATGATGACGTCAAAAGGATCCGGATAAAACATGGTGATCGCCTCGCAT > SRR4302547.6765027/1‑94 (MQ=60)
CGCCGCGCCCATCGCGTCCTCGGTGCCTGCATGACCCCCGCCAATGATGATGACGTCAAAAGGATCCGGATAAAACATGGTGATCGCCTCGCAT < SRR4302547.1266344/94‑1 (MQ=60)
GCCGCGGCCATCGCGTCCTCGGTGCCTGCATGACCCCCGCCAATGATGATGACGTCAAAAGCATCCGGATAAAACATGGTGATCGCCTCGCATA < SRR4302547.5417405/94‑1 (MQ=60)
GCCGCGGCCATCGCGGCCTCGGTGCCTGCATGACCCCCGCCAATGATGATGACGTCAAAAGGATCCGGATAAAACATGGTGATCGCCTCGCATA > SRR4302547.401219/1‑94 (MQ=60)
CCGCGGCCATCGCGGCCTCGGTGCCTGCATGACCCCCGCCAATGATGATGACGTCAAAAGGATCCGGATAAAACATGGTGATCGCCTCGCATAA > SRR4302547.279564/1‑94 (MQ=60)
CGCGGCCATCGCGGCCTCGGTGCCTGCATGACCCCCGCCAATGATGATGACGTCAAAAGGATCCGGATAAAACATGGTGATCGCCTCGCATAAC > SRR4302547.4463974/1‑94 (MQ=60)
CGCGGCCATCGCGGCCTCGGTGCCTGCATGACCCCCGCCAATGATGATGACGTCAAAAGGATCCGGATAAAACATGGTGATCGCCTCGCATAAC > SRR4302547.2669242/1‑94 (MQ=60)
GCGGCCATCGCGGCCTCGGTGCCTGCATGACCCCCGCCAATGATGATGACGTCAAAAGGATCCGGATAAAACATGGTGATCGCCTCGCATAACG > SRR4302547.4083037/1‑94 (MQ=60)
GCGGCCATCGCGGCCTCGGTGCCTGCATGACCCCCGCCAATGATGATGACGTCAAAAGGATCCGGATAAAACATGGTGATCGCCTCGCATAACG > SRR4302547.5045571/1‑94 (MQ=60)
GCGGCCATCGCGGCCTCGGTGCCTGCATGACCCCCGCCAATGATGATGACGTCAAAAGGATCCGGATAAAACATGGTGATCGCCTCGCATAACG > SRR4302547.5783640/1‑94 (MQ=60)
CGGCCATCGCGGCCTCGGTGCCTGCATGACCCCCGCCAATGATGATGACGTCAAAAGGATCCGGATAAAACATGGTGATTGCCTCGCATAACGC > SRR4302547.5872324/1‑94 (MQ=60)
CGGCCATCGCGGCCTCGGTGCCTGCATGACCCCCGCCAATGATGATGACGTCAAAAGGATCCGGATAAAACATGGTGATCGCCTCGCATAACGC < SRR4302547.2765580/94‑1 (MQ=60)
ggccatccagcctTCGGTGCCTGCATGACCCCCGCTAATGATGATGACGTCAAAAGGATCCGGATAAAACATGGTGATCGCCTCGCATAACGCG < SRR4302547.6187524/81‑1 (MQ=60)
GCCATCGCGGCCTCGGTGCCTGCATGACCCCCGCCAATGATGATGACGTCAAAAGGATCCGGATAAAACATGGTGATCGCCTCGCATAACGCGG < SRR4302547.5817918/94‑1 (MQ=60)
CATCGCGGCCTCGGTGCCTGCATGACCCCCGCCAATGATGATGACGTCAAAAGGATCCGGATAAAACATGGTGATCGCCTCGCATAACGCGGTA < SRR4302547.5789032/94‑1 (MQ=60)
GCGGCCTCGGTGCCTGCATGACCCCCGCCAATGATGATGACGTCAAAAGGATCCGGATAAAACATGGTGATCGCCTCGCATAACGCGGTATGAA < SRR4302547.6036705/94‑1 (MQ=60)
GCGGCCTCGGTGCCTGCATGACCCCCGCCAATGATGATGACGTCAAAAGGATCCGGATAAAACATGGTGATCGCCTCGCATAACGCGGTATGAA > SRR4302547.5750996/1‑94 (MQ=60)
GCGCCCTCGGTGCCTGCATGACCCCCGCCAATGATGATGACGTCAAAAGGATCCGGATAAAACATGGTGATCGCCTCGCATAACGCGGTATGAA < SRR4302547.4863340/94‑1 (MQ=60)
CGGCCTGGGTCCCTGCATGCCCCCCGCCAATGATGATGACGTCAAAAGGATCCTGATAAAACATGGTGATCGCCACGCAGAACGCGGTATGAAA < SRR4302547.5933610/94‑1 (MQ=60)
CGGCCTCGGTGCCTGCATGACCCCCGCCAATGATGATGACGTCAAAAGGATCCGGATAAAACATGGTGATTGCCTCGCATAACGCGGTATGAAA > SRR4302547.2375257/1‑94 (MQ=60)
CGGCCTCGGTGCCTGCATGACCCCCGCCAATGATGATGACGTCAAAAGGATCCGGATAAAACATGGTGATCGCCTCGCATAACGCGGTATGAAA > SRR4302547.3972755/1‑94 (MQ=60)
CGGCCTCGGTGCCTGCATGACCCCCGCCAATGATGATGACGTCAAAAGGATCCGGATAAAACATGGTGATCGCCTCGCATAACGCGGTATGAAA > SRR4302547.3265811/1‑94 (MQ=60)
CGCCCTCGGTGCCTGCATGACCCCCGCCAATGATGATGACGTCAAAAGGATCCGGATAAAACATGGTGATCGCCTCGCATAACGCGGTATGAAA < SRR4302547.3559512/94‑1 (MQ=60)
GGCCTGGGTGCCTGCATGACCCCCGCCAATGATGATGACGTCAAAAGGATCCGGATAAAACATGGTGATCGCCTCGCATAACGCGGTATGAAAA < SRR4302547.4416717/94‑1 (MQ=60)
CTTCGGTGCCTGCATGCCCCCCGCCAATGATGATGACGTCAAAAGGATCCGGATAAAACATGGTGATCGCCTCGCATAACGCGGTATGAAAATG < SRR4302547.2703080/94‑1 (MQ=60)
CCTCGGTGCCTGCATGACCCCCGCCAATGATGATGACGTCAAAAGGATCCGGATAAAACATGGTGATCGCCTCGCATAACGCGGTATGAAAATG < SRR4302547.2770310/94‑1 (MQ=60)
CCTCGGCGCCTGCATGACCCCCGCCAATGATGATGCCGTCAAAAGGATCCGGATAAAACATGGCGATCGCCTCGCATAACGCGGTATGAAAATG > SRR4302547.177530/1‑94 (MQ=60)
CGGTGCCTGCATGACCCCCGCCAATGATGATGACGTCAAAAGGATCCGGATAAAACATGGTGATTGCCTCGCATAACGCGGTATGAAAATGGAT < SRR4302547.649005/94‑1 (MQ=60)
GGTGCCTGCATGCCCCCCGCCAATGATGATGACGTCAAAAGGATCCGGATAAAACATGGTGATCGCCTCGCATAACGCGGTATGAAAATGGATT < SRR4302547.1943320/94‑1 (MQ=60)
GGTGCCTGCATGCCCCCCGCCAATGATGATGACGTCAAAAGGATCCGGATAAAACATGGTGATCGCCTCGCATAACGCGGTATGAAAATGGATT < SRR4302547.3796240/94‑1 (MQ=60)
GGTGCCTGCATGACCCCCGCCAATGATGATGACGTCAAAAGGATCCGGATAAAACATGGTGATTGCCTCGCATAACGCGGTATGAAAATGGATT > SRR4302547.1998353/1‑94 (MQ=60)
GGTGCCTGCATGACCCCCGCCAATGATGATGACGTCAAAAGGATCCGGATAAAACATGGTGATCGCCTCGCATAACGCGGTATGAAAATGGATT < SRR4302547.5895792/94‑1 (MQ=60)
TGCCTGCATGACCCCCGCCAATGATGATGACGTCAAAAGGATCCGGATAAAACATGGTGATTGCCTCGCATAACGCGGTATGAAAATGGATTGA < SRR4302547.5848607/94‑1 (MQ=60)
CCTGCATGCCCCCCGCCAATGATGATGACGTCAAAAGGATCCGGATAAAACATGGTGATCGCCTCGCATAACGCGGTATGAAAATGGATTGAAG < SRR4302547.3752331/94‑1 (MQ=60)
CTGCATGACCCCCGCCAATGATGATGACGTCAAAAGGATCCGGATAAAACATGGTGATTGCCTCGCATAACGCGGTATGAAAATGGATTGAAGC > SRR4302547.6652184/1‑94 (MQ=60)
CTGCATGACCCCCGCCAATGATGATGACGTCAAAAGGATCCGGATAAAACATGGTGATCGCCTCGCATAACGCGGTATGAAAATGGATTGAAGC > SRR4302547.499844/1‑94 (MQ=60)
TGCATGCCCCCCGCCAATGATGATGACGTCAAAAGGATCCGGATAAAACATGGTGATTGCCTCGCATAACGCGGTATGAAAATGGATTGAAGCC < SRR4302547.1113573/94‑1 (MQ=60)
TGCATGACCCCCGCCAATGATGATGACGTCAAAAGGATCCGGATAAAACATGGTGATCGCCTCGCATAACGCGGTATGAAAATGGATTGAAGCC > SRR4302547.1420211/1‑94 (MQ=60)
TGCATGACCCCCGCCAATGATGATGACGTCAAAAGGATCCGGATAAAACATGGTGATCGCCTCGCATAACGCGGTATGAAAATGGATTGAAGCC < SRR4302547.4645020/94‑1 (MQ=60)
TGCATGACCCCCGCCAATGATGATGACGTCAAAAGGATCCGGATAAAACATGGTGATCGCCTCGCATAACGCGGTATGAAAATGGATTGAAGCC > SRR4302547.4493989/1‑94 (MQ=60)
GCATGACCCCCGCCAATGATGATGACGTCAAAAGGATCCGGATAAAACATGGTGATTGCCTCGCATAACGCGGTATGAAAATGGATTGAAGCCC < SRR4302547.6695247/94‑1 (MQ=60)
GCATGACCCCCGCCAATGATGATGACGTCAAAAGGATCCGGATAAAACATGGTGATCGCCTCGCATAACGCGGTATGAAAATGGATTGAAGCCC < SRR4302547.5002698/94‑1 (MQ=60)
GCATGACCCCCGCCAATGATGATGACGTCAAAAGGATCCGGATAAAACATGGTGATCGCCTCGCATAACGCGGTATGAAAATGGATTGAAGCCC < SRR4302547.4433648/94‑1 (MQ=60)
atacCCCCCGCCAATGATGATGACGTCAAAAGGATCCGGATAAAACATGGTGATCGCCTCGCATAACGCGGTATGAATATGGATTGAAGCCCGG < SRR4302547.1696315/90‑1 (MQ=60)
ATGACCCGCGCCAATGATGATGACGTCAAAAGGATCCGGATAAAACATGGTGATCGCCTCGCATAACGCGGTATGAAAATGGATTGAAGGCCGG < SRR4302547.2946456/94‑1 (MQ=60)
ATGACCCCCGCCAATGATGATGACGTCAAAAGGATCCGGATAAAACATGGTGATCGCCTCGCATAACGCGGTATGAAAATGGATTGAAGCCCGG < SRR4302547.2444999/94‑1 (MQ=60)
ATGACCCCCGCCAATGATGATGACGTCAAAAGGATCCGGATAAAACATGGTGATCGCCTCGCATAACGCGGTATGAAAATGGATTGAAGCCCGG < SRR4302547.5048106/94‑1 (MQ=60)
ATGACCCCCGCCAATGATGATGACGTCAAAAGGATCCGGATAAAACATGGTGATCGCCTCGCATAACGCGGTATGAAAATGGATTGAAGCCCGG < SRR4302547.4755489/94‑1 (MQ=60)
ATGACCCCCGCCAATGATGATGACGTCAAAAGGATCCGGATAAAACATGGTGATCGCCTCGCATAACGCGGTATGAAAATGGATTGAAGCCCGG < SRR4302547.5315614/94‑1 (MQ=60)
ATGACCCCCGCCAATGATGATGACGTCAAAAGGATCCGGATAAAACATGGTGATCGCCTCGCATAACGCGGTATGAAAATGGATTGAAGCCCGG < SRR4302547.437508/94‑1 (MQ=60)
TGACCCCCGCCAATGATGATGACGTCAAAAGGATCCGGATAAAACATGGTGATCGCCTCGCATAACGCGGTATGAAAATGGATTGAAGCCCGGG > SRR4302547.6322151/1‑94 (MQ=60)
TGACCCCCGCCAATGATGATGACGTCAAAAGGATCCGGATAAAACATGGTGATCGCCTCGCATAACGCGGTATGAAAATGGATTGAAGCCCGGG < SRR4302547.4861628/94‑1 (MQ=60)
CCCCCCGCCAATGATGATGACGTCAAAAGGATGCGGATAAAACATGGTGATCGCCTCGCATAACGCGGTATGAAAATGGATTGAAGCCCGGGCC < SRR4302547.2954334/94‑1 (MQ=60)
CCCCCCGCCAATGATGATGACGTCAAAAGGATCCGGATAAAACATGGTGATCGCCTCGCATAACGCGGTATGAAAATGGATTGAAGCCCGGGCC < SRR4302547.626633/94‑1 (MQ=60)
CCCCCCGCCAATGATGATGACGTCAAAAGGATCCGGATAAAACATGGTGATCGCCTCGCATAACGCGGTATGAAAATGGATTGAAGCCCGGGCC < SRR4302547.6326599/94‑1 (MQ=60)
CCCCCGCCAATGATGATGACGTCAAAAGGATCCGGATAAAACATGGTGATTGCCTCGCATAACGCGGTATGAAAATGGATTGAAGCCCGGGCCG > SRR4302547.1444374/1‑94 (MQ=60)
CCCCCGCCAATGATGATGACGTCAAAAGGATCCGGATAAAACATGGTGATCGCCTCGCATAACGCGGTATGAAAATGGATTGAAGCCCGGGCCG > SRR4302547.2893995/1‑94 (MQ=60)
CCCCCGCCAATGATGATGACGTCAAAAGGATCCGGATAAAACATGGTGATCGCCTCGCATAACGCGGTATGAAAATGGATTGAAGCCCGGGCCG < SRR4302547.10253/94‑1 (MQ=60)
CCGCCAATGATGATGACGTCAAAAGGATCCGGATAAAACATGGTGATTGCCTCGCATAACGCGGTATGAAAATGGATTGAAGCCCGGGCCGTGG > SRR4302547.6751430/1‑94 (MQ=60)
CGCCAATGATGATGACGTCAAAAGGATCCGGATAAAACATGGTGATCGCCTCGCATAACGCGGTATGAAAATGGATTGAAGCCCGGGCCGTGGA > SRR4302547.5748516/1‑94 (MQ=60)
CCAATGATGATGACGTCAAAAGGATCCGGATAAAACATGGTGATCGCCTCGCATAACGCGGTATGAAAATGGATTGAAGCCCGGGCCGTGGATT > SRR4302547.877619/1‑94 (MQ=60)
CAATGATGATGACGTCAAAAGGATCCGGATAAAACATGGTGATTGCCTCGCATAACGCGGTATGAAAATGGATTGAAGCCCGGGCCGTGGATTC < SRR4302547.601953/94‑1 (MQ=60)
CAATGATGATGACGTCAAAAGGATCCGGATAAAACATGGTGATTGCCTCGCATAACGCGGTATGAAAATGGATTGAAGCCCGGGCCGTGGATTC > SRR4302547.2720064/1‑94 (MQ=60)
CAATGATGATGACGTCAAAAGGATCCGGATAAAACATGGTGATCGCCTCGCATAACGCGGTATGAAAATGGATTGAAGCCCGGGCCGTGGATTC > SRR4302547.3485410/1‑94 (MQ=60)
CAATGATGATGACGTCAAAAGGATCCGGATAAAACATGGTGATCGCCTCGCATAACGCGGTATGAAAATGGATTGAAGCCCGGGCCGTGGATTC < SRR4302547.3911430/94‑1 (MQ=60)
AATGATGATGACGTCAGAAGGATCAGGATAAAACATGGAGATTGCCTCGCATAACGTGGTATGAAAATGGATTGAAGCCCGGGCCGTGGATTCT < SRR4302547.4267979/94‑1 (MQ=60)
AATGATGATGACGTCAAAAGGATCCGGATAAAACATGGTGATCGCCTCGCATAACGCGGTATGAAAATGGATTGAAGCCCGGGCCGTGGATTCT < SRR4302547.4998478/94‑1 (MQ=60)
AATGATGATGACGTCAAAAGGATCCGGATAAAACATGGTGATCGCCTCGCATAACGCGGTATGAAAATGGATTGAAGCCCGGGCCGTGGATTCT > SRR4302547.3360376/1‑94 (MQ=60)
AATGATCATGTCGTGAAAAGGAGCCGGATAAATCACGGTGATCTCCTCCAAAAACGAGGTATGAAAATGGATTGAAGCCCGGGCCGTGGATTCT < SRR4302547.887834/94‑1 (MQ=28)
ATGATGATGACGTCAAAAGGATCCGGATAAAACATGGTGATCGCCTCGCATAACGCGGTATGAAAATGGATTGAAGCCCGGGCCGTGGATTCTA < SRR4302547.5004023/94‑1 (MQ=60)
TGATGATGACGTCAAAAGGATCCGGATAAAACATGGTGATTGCCTCGCATAACGCGGTATGAAAATGGATTGAAGCCCGGGCCGTGGATTCTAC > SRR4302547.1232895/1‑94 (MQ=60)
GATGATGACGTCAAAAGGATCCGGATAAAACATGGTGATCGCCTCGCATAACGCGGTATGAAAATGGATTGAAGCCCGGGCCGTGGATTCTACT > SRR4302547.6374538/1‑94 (MQ=60)
ATGATGACGTCAAAAGGATCCGGATAAAACATGGTGATCGCCTCGCATAACGCGGTATGAAAATGGATTGAAGCCCGGGCCGTGGATTCTACTC > SRR4302547.1362770/1‑94 (MQ=60)
ATGACGTCAAAAGGATCCGGATAAAACATGGTGATCGCCTCGCATAACGCGGTATGAAAATGGATTGAAGCCCGGGCCGTGGATTCTACTCAAC > SRR4302547.1823241/1‑94 (MQ=60)
TGACGTCAAAAGGATCCGGATAAAACATGGTGATCGCCTCGCATAACGCGGTATGAAAATGGATTGAAGCCCGGGCCGTGGATTCTACTCAACT > SRR4302547.3361407/1‑94 (MQ=60)
GACGTCAAAAGGATCCGGATAAAACATGGTGATCGCCTCGCATAACGCGGTATGAAAATGGATTGAAGCCCGGGCCGTGGATTCTACTCAACTT < SRR4302547.4621224/94‑1 (MQ=60)
GTCAAAAGGATCCGGATAAAACATGGTGATCGCCTCGCATAACGCGGTATGAAAATGGATTGAAGCCCGGGCCGTGGATTCTACTCAACTTTGT > SRR4302547.5405555/1‑94 (MQ=60)
TCAAAAGGATCCGGATAAAACATGGTGATCGCCTCGCATAACGCGGTATGAAAATGGATTGAAGCCCGGGCCGTGGATTCTACTCAACTTTGTC > SRR4302547.2244422/1‑94 (MQ=60)
CAAAAGGATCCGGATAAAACATGGTGATCGCCTCGCATAACGCGGTATGAAAATGGATTGAAGCCCGGGCCGTGGATTCTACTCAACTTTGTCG > SRR4302547.5538784/1‑94 (MQ=60)
CAAAAGGATCCGGATAAAACATGGTGATCGCCTCGCATAACGCGGTATGAAAATGGATTGAAGCCCGGGCCGTGGATTCTACTCAACTTTGTCG < SRR4302547.4273495/94‑1 (MQ=60)
AAAAGGATCCGGATAAAACATGGTGATCGCCTCGCATAACGCGGTATGAAAATGGATTGAAGCCCGGGCCGTGGATTCTACTCAACTTTGTCGG > SRR4302547.185808/1‑94 (MQ=60)
AAAAGGATCCGGATAAAACATGGTGATCGCCTCGCATAACGCGGTATGAAAATGGATTGAAGCCCGGGCCGTGGATTCTACTCAACTTTGTCGG < SRR4302547.5774764/94‑1 (MQ=60)
AAAAGGATCCGGATAAAACATGGTGATCGCCTCGCATAACGCGGTATGAAAATGGATTGAAGCCCGGGCCGTGGATTCTACTCAACTTTGTCGG > SRR4302547.409092/1‑94 (MQ=60)
AAAGGATCCGGATAAAACATGGTGATCGCCTCGCATAACGCGGTATGAAAATGGATTGAAGCCCGGGCCGTGGATTCTACTCAACTTTGTCGGC < SRR4302547.5637130/94‑1 (MQ=60)
AGGGATCCGGATAAAACATGGTGATCGCCTCGCATAACGCGGTATGAAAATGGATTGAAGCCCGGGCCGTGGATTCTACTCAACTTTGTCGGCT < SRR4302547.4804216/94‑1 (MQ=60)
AAGGATCCGGATAAAACATGGTGATCGCCTCGCATAACGCGGTATGAAAATGGATTGAAGCCCGGGCCGTGGATTCTACTCAACTTTGTCGGCT < SRR4302547.2060838/94‑1 (MQ=60)
AGGATCCGGATAAAACATGGTGATCGCCTCGCATAACGCGGTATGAAAATGGATTGAAGCCCGGGCCGTGGATTCTACTCAACTTTGTCGGCTT < SRR4302547.652260/94‑1 (MQ=60)
AGGATCCGGATAAAACATGGTGATCGCCTCGCATAACGCGGTATGAAAATGGATTGAAGCCCGGGCCGTGGATTCTACTCAACTTTGTCGGCTT > SRR4302547.6310715/1‑94 (MQ=60)
GGATCCGGATAAAACATGGTGATCGCCTCGCATAACGCGGTATGAAAATGGATTGAAGCCCGGGCCGTGGATTCTACTCAACTTTGTCGGCTTG < SRR4302547.921244/94‑1 (MQ=60)
GATCCGGATAAAACATGGTGATCGCCTCGCATAACGCGGTATGAAAATGGATTGAAGCCCGGGCCGTGGATTCTACTCAACTTTGTCGGCTTGA < SRR4302547.413210/94‑1 (MQ=60)
ATCCGGATAAAACATGGTGATCGCCTCGCATAACGCGGTATGAAAATGGATTGAAGCCCGGGCCGTGGATTCTACTCAACTTTGTCGGCTTGAG < SRR4302547.2917517/94‑1 (MQ=60)
TCCGGATAAAACATGGTGATCGCCTCGCATAACGCGGTATGAAAATGGATTGAAGCCCGGGCCGTGGATTCTACTCAACTTTGTCGGCTTGAGA > SRR4302547.6516744/1‑94 (MQ=60)
TCCGGATAAAACATGGTGATCGCCTCGCATAACGCGGTATGAAAATGGATTGAAGCCCGGGCCGTGGATTCTACTCAACTTTGTCGGCTTGAGA > SRR4302547.5556697/1‑94 (MQ=60)
CGGATAAAACATGGTGATTGCCTCGCATAACGCGGTATGAAAATGGATTGAAGCCCGGGCCGTGGATTCTACTCAACTTTGTCGGCTTGAGAAA > SRR4302547.2738009/1‑94 (MQ=60)
CGGATAAAACATGGTGATCGCCTCGCATAACGCGGTATGAAAATGGATTGAAGCCCGGGCCGTGGATTCTACTCAACTTTGTCGGCTTGAGAAA > SRR4302547.6112894/1‑94 (MQ=60)
CGGATAAAACATGGTGATCGCCTCGCATAACGCGGTATGAAAATGGATTGAAGCCCGGGCCGTGGATTCTACTCAACTTTGTCGGCTTGAGAAA < SRR4302547.4065550/94‑1 (MQ=60)
ATAAAANNTGGTGATCGCCTCGCATAACGCGGTATGAAAATGGATTGAAGCCCGGGCCGTGGATNNNNNNNANCTTTGTCGGCNNNNGNNANAC > SRR4302547.1444216/1‑94 (MQ=60)
ATAAAACATGGTGATTGCCTCGCATAACGCGGTATGAAAATGGATTGAAGCCCGGGCCGTGGATTCTACTCAACTTTGTCGGCTTGAGAAAGAC < SRR4302547.1528143/94‑1 (MQ=60)
ATAAAACATGGTGATTGCCTCGCATAACGCGGTATGAAAATGGATTGAAGCCCGGGCCGTGGATTCTACTCAACTTTGTCGGCTTGAGAAAGAC > SRR4302547.143476/1‑94 (MQ=60)
ATAAAACATGGTGATCGCCTCGCATAACGCGGTATGAAAATGGATTGAAGCCCGGGCCGTGGATTCTACTCAACTTTGTCGGCTTGAGAAAGAC > SRR4302547.3795387/1‑94 (MQ=60)
ATAAAACATGGTGATCGCCTCGCATAACGCGGTATGAAAATGGATTGAAGCCCGGGCCGTGGATTCTACTCAACTTTGTCGGCTTGAGAAAGAC < SRR4302547.3822171/94‑1 (MQ=60)
TAAAACATGGTGATCGCCTCGCATAACGCGGTATGAAAATGGATTGAAGCCCGGGCCGTGGATTCTACTCAACTTTGTCGGCTTGAGAAAGACC < SRR4302547.3045557/94‑1 (MQ=60)
AAACATGGTGATTGCCTCGCATAACGCGGTATGAAAATGGATTGAAGCCCGGGCCGTGGATTCTACTCAACTTTGTCGGCTTGAGAAAGACCTG < SRR4302547.4200609/94‑1 (MQ=60)
AAACATGGTGATTGCCTCGCATAACGCGGTATGAAAATGGATTGAAGCCCGGGCCGTGGATTCTACTCAACTTTGTCGGCTTGAGAAAGACCTG < SRR4302547.292891/94‑1 (MQ=60)
AAACATGGTGATCGCCTCGCATAACGCGGTATGAAAATGGATTGAAGCCCGGGCCGTGGATTCTACTCAACTTTGTCGGCTTGAGAAAGACCTG < SRR4302547.5600431/94‑1 (MQ=60)
AAACATGGTGATCGCCTCGCATAAAGCGGTATGAAAATGGATTGAAGCCCGGGCCGTGGATTCTACTCAACTTTGTCGGCTTGAGAAAGACCTG > SRR4302547.3741785/1‑94 (MQ=60)
AACATGGTGATCGCCTCGCATAACGCGGTATGAAAATGGATTGAAGCCCGGGCCGTGGATTCTACTCAACTTTGTCGGCTTGAGAAAGACCTGG < SRR4302547.3685519/94‑1 (MQ=60)
AACATGGTGATCGCCTCGCATAACGCGGTATGAAAATGGATTGAAGCCCGGGCCGTGGATTCTACTCAACTTTGTCGGCTTGAGAAAGACCTGG < SRR4302547.885695/94‑1 (MQ=60)
AACATGGTGATCGCCTCGCATAACGCGGTATGAAAATGGATTGAAGCCCGGGCCGTGGATTCTACTCAACTTTGTCGGCTTGAGAAAGAACTGG > SRR4302547.5212294/1‑94 (MQ=60)
ACATGGTGATCGCCTCGCATAACGCGGTATGAAAATGGATTGAAGCCCGGGCCGTGGATTCTACTCAACTTTGTCGGCTTGAGAAAGACCTGGG < SRR4302547.4996360/94‑1 (MQ=60)
ACATGGTGATCGCCTCGCATAACGCGGTATGAAAATGGATTGAAGCCCGGGCCGTGGATTCTACTCAACTTTGTCGGCTTGAGAAAGACCTGGG > SRR4302547.672480/1‑94 (MQ=60)
ACATGGTGATCGCCTCGCATAACGCGGTATGAAAATGGATTGAAGCCCGGGCCGTGGATTCTACTCAACTTTGTCGGCTTGAGAAAGACCTGGG < SRR4302547.5840183/94‑1 (MQ=60)
CATGGTGATCGCCTCGCATAACGCGGTATGGAAATGGATTGAAGCCCGGGCCGTGGATTCTACTCAACTTTGTCGGCTTGAGAAAGACCTGGGA > SRR4302547.5953021/1‑94 (MQ=60)
GTGATCGCCTCGCATAACGCGGTATGAAAATGGATTGAAGCCCGGGCCGTGGATTCTACTCAACTTTGTCGGCTTGAGAAAGACCTGGGATCCT < SRR4302547.5373032/94‑1 (MQ=60)
GTGATCGCCTCGCATAACGCGGTATGAAAATGGATTGAAGCCCGGGCCGTGGATTCTACTCAACTTTGTCGGCTTGAGAAAGACCTGGGATCCT > SRR4302547.2308524/1‑94 (MQ=60)
TTGCCTCGCATAACGCGGTATGAAAATGGATTGAAGCCCGGGCCGTGGATTCTACTCAACTTTGTCGGCTTGAGAAAGACCTGGGATCCTGGGT < SRR4302547.4430867/94‑1 (MQ=60)
TCGCCTCGCATAACGCGGTATGAAAATGGATTGAAGCCCGGGCCGTGGATTCTACTCAACTTTGTCGGCTTGAGAAAGACCTGGGATCCTGGGT < SRR4302547.5379637/94‑1 (MQ=60)
TCGCCTCGCATAACGCGGTATGAAAATGGATTGAAGCCCGGGCCGTGGATTCTACTCAACTTTGTCGGCTTGAGAAAGACCTGGGATCCTGGGT < SRR4302547.4360890/94‑1 (MQ=60)
TCGCCTCGCATAACGCGGTATGAAAATGGATTGAAGCCCGGGCCGTGGATTCTACTCAACTTTGTCGGCTTGAGAAAGACCTGGGATCCTGGGT < SRR4302547.6059282/94‑1 (MQ=60)
CGCCTCGCATAACGCGGTATGAAAATGGATTGAAGCCCGGGCCGTGGATTCTACTCAACTTTGTCGGCTTGAGAAAGACCTGGGATCCTGGGTA > SRR4302547.3753220/1‑94 (MQ=60)
CGCCTCGCATAACGCGGTATGAAAATGGATTGAAGCCCGGGCCGTGGATTCTACTCAACTTTGTCGGCTTGAGAAAGACCTGGGATCCTGGGTA < SRR4302547.2638755/94‑1 (MQ=60)
CGCCTCGCATAACGCGGTATGAAAATGGATTGAAGCCCGGGCCGTGGATTCTACTCAACTTTGTCGGCTTGAGAAAGACCTGGGATCCTGGGGA > SRR4302547.4589974/1‑94 (MQ=60)
|
ACCCATACGCGCCGCGGCCATCGCGGCCTCGGTGCCTGCATGACCCCCGCCAATGATGATGACGTCAAAAGGATCCGGATAAAACATGGTGATTGCCTCGCATAACGCGGTATGAAAATGGATTGAAGCCCGGGCCGTGGATTCTACTCAACTTTGTCGGCTTGAGAAAGACCTGGGATCCTGGGTA > NC_000913/3923175‑3923361
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
