Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
593 |
264.2 |
13311096 |
97.8% |
13018251 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,968,795 |
C→T |
R364C (CGC→TGC) |
wecB → |
UDP‑N‑acetyl glucosamine ‑2‑epimerase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,968,795 | 0 | C | T | 85.8%
| 924.2
/ 109.1
| 317 | R364C (CGC→TGC) | wecB | UDP‑N‑acetyl glucosamine ‑2‑epimerase |
| Reads supporting (aligned to +/- strand): ref base C (24/21); new base T (138/134); total (162/155) |
| Fisher's exact test for biased strand distribution p-value = 8.72e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.33e-01 |
Only 100 of 323 total aligned reads displayed.
ACGGTGCGTCTGGTAGGCACGGATAAGCAGCGAATTGTCGAGGAAGTGACGCGTCTTTTAAAAGACGAAAACGAATATCAAGCTATGAGCCGCGCCCATAACCCGTATGGTGATGGTCAGGCATGCTCTCGCATTCTGGAAGCGTTAAAAAATAATCGGATATCACTATGAGTTTTGCGACCA > NC_000913/3968705‑3968887
|
ggTGCGTCTGGTAGGCACGGATAAGCAGCGAATTGTCGAGGAAGTGACGCGTCTTTTAAAAGACGAAAACGAATATCAAGCTATGAGCTgcgc < 1:4837324/93‑1 (MQ=255)
gTGCGTCTGGTAGGCACGGATAAGCAGCGAATTGTCGAGGAAGTGACGCGTCTTTTAAAAGACGAAAACGAATATCAAGCTATGAGCTGCGcc < 1:2826254/93‑1 (MQ=255)
tGCGTCTGGTAGGCACGGATAAGCAGCGAATTGTCGAGGAAGTGACGCGTCTTTTAAAAGACGAAAACGAATATCAAGCTATGAGCCGCGccc < 1:776692/93‑1 (MQ=255)
tGCGTCTGGTAGGCACGGATAAGCAGCGAATTGTCGAGGAAGTGACGCGTCTTTTAAAAGACGAAAACGAATATCAAGCTATGAGCCGCGccc < 1:3884335/93‑1 (MQ=255)
ggCGTCTGGTAGGCACGGATAAGCAGCGAATTGTCGAGGAAGTGACGCGTCTTTTAAAAGACGAAAACGAATATCAAGCTATGAGCTGCGccc < 1:1481980/92‑1 (MQ=255)
cGTCTGGTAGGCACGGATAAGCAGCGAATTGTCGAGGAAGTGACGCGTCTTTTAAAAGACGAAAACGAATATCAAGCTATGAGCCGCGCCCAt > 1:2060144/1‑93 (MQ=255)
gTCTGGTAGGCACGGATAAGCAGCGAATTGTCGAGGAAGTGACGCGTCTTTTAAAAGACGAAAACGAATATCAAGCTATGAGCCGCGCCCATa < 1:2564886/93‑1 (MQ=255)
tCTGGTAGGCACGGATAAGCAGCGAATTGTCGAGGAAGTGACGCGTCTTTTAAAAGACGAAAACGAATATCAAGCTATGAGCTGCGCCCATaa > 2:1536948/1‑93 (MQ=255)
tCTGGTAGGCACGGATAAGCAGCGAATTGTCGAGGAAGTGACGCGTCTTTTAAAAGACGAAAACGAATATCAAGCTATGAGCTGCGCCCATaa > 1:954736/1‑93 (MQ=255)
cTGGTAGGCACGGATAAGCAGCGAATTGTCGAGGAAGTGACGCGTCTTTTAAAAGACGAAAACGAATATCAAGCTATGAGCTGCGCCCATAAc < 2:2227319/93‑1 (MQ=255)
cTGGTAGGCACGGATAAGCAGCGAATTGTCGAGGAAGTGACGCGTCTTTTAAAAGACGAAAACGAATATCAAGCTATGAGCTGCGCCCATAAc < 2:3873830/93‑1 (MQ=255)
tGGTAGGCACGGATAAGCAGCGAATTGTCGAGGAAGTGACGCGTCTTTTAAAAGACGAAAACGAATATCAAGCTATGAGCTGCGCCCATAAcc > 1:1269613/1‑93 (MQ=255)
gTAGGCACGGATAAGCAGCGAATTGTCGAGGAAGTGACGCGTCTTTTAAAAGACGAAAACGAATATCAAGCTATGAGCTGCGCCCATAACCCg < 1:4958686/93‑1 (MQ=255)
gTAGGCACGGATAAGCAGCGAATTGTCGAGGAAGTGACGCGTCTTTTAAAAGACGAAAACGAATATCAAGCTATGAGCTGCGCCCATAACCCg < 1:5857325/93‑1 (MQ=255)
gTAGGCACGGATAAGCAGCGAATTGTCGAGGAAGTGACGCGTCTTTTAAAAGACGAAAACGAATATCAAGCTATGAGCTGCGCCCATAACCCg < 2:4169138/93‑1 (MQ=255)
gTAGGCACGGATAAGCAGCGAATTGTCGAGGAAGTGACGCGTCTTTTAAAAGACGAAAACGAATATCAAGCTATGAGCTGCGCCCATAACCCg < 1:519273/93‑1 (MQ=255)
aGGCACGGATAAGCAGCGAATTGTCGAGGAAGTGACGCGTCTTTTAAAAGACGAAAACGAATATCAAGCTATGAGCTGCGCCCATAACCCGTa < 2:4872813/93‑1 (MQ=255)
ggCACGGATAAGCAGCGAATTGTCGAGGAAGTGACGCGTCTTTTAAAAGACGAAAACGAATATCAAGCTATGAGCTGCGCCCATAACCCGTAt > 1:6268639/1‑93 (MQ=255)
ggCACGGATAAGCAGCGAATTGTCGAGGAAGTGACGCGTCTTTTAAAAGACGAAAACGAATATCAAGCTATGAGCTGCGCCCATAACCCGTAt > 1:1000367/1‑93 (MQ=255)
ggCACGGATAAGCAGCGAATTGTCGAGGAAGTGACGCGTCTTTTAAAAGACGAAAACGAATATCAAGCTATGAGCTGCGCCCATAACCCGTAt < 1:411028/93‑1 (MQ=255)
gCACGGATAAGCAGCGAATTGTCGAGGAAGTGACGCGTCTTTTAAAAGACGAAAACGAATATCAAGCTATGAGCTGCGCCCATAACCCGTATg > 2:6436292/1‑93 (MQ=255)
cACGGATAAGCAGCGAATTGTCGAGGAAGTGACGCGTCTTTTAAAAGACGAAAACGAATATCAAGCTATGAGCCGCGCCCATAACCCGTATgg < 1:425537/93‑1 (MQ=255)
cACGGATAAGCAGCGAAGTGTCGAGGAAGTGACGCGTCTTTTAAAAGACGAAAACGAATATCAAGCTATGAGCTGCGCCCATAACCCGTATgg < 2:5287456/93‑1 (MQ=255)
aCGGATAAGCAGCGAATTGTCGAGGAAGTGACGCGTCTTTTAAAAGACGAAAACGAATATCAAGCTATGAGCTGCGCCCATAACCCGTATggg > 1:6393496/1‑92 (MQ=255)
aTAAGCAGCGAATTGTCGAGGAAGTGACGCGTCTTTTAAAAGACGAAAACGAATATCAAGCTATGAGCTGCGCCCATAACCCGTATGGTGATg > 1:1956649/1‑93 (MQ=255)
tAAGCAGCGAATTGTCGAGGAAGTGACGCGTCTTTTAAAAGACGAAAACGAATATCAAGCTATGAGCTGCGCCCATAACCCGTATGGTGATgg > 1:746331/1‑93 (MQ=255)
agcagcGAATTGTCGAGGAAGTGACGCGTCTTTTAAAAGACGAAAACGAATATCAAGCTATGAGCTGCGCCCATAACCCGTATGGTGATGGTc < 2:5231814/93‑1 (MQ=255)
gcagcGAATTGTCGAGGAAGTGACGCGTCTTTTAAAAGACGAAAACGAATATCAAGCTATGAGCTGCGCCCATAACCCGTATGGTGATGGTCa < 2:1952667/93‑1 (MQ=255)
cagcGAATTGTCGAGGAAGTGACGCGTCTTTTAAAAGACGAAAACGAATATCAAGCTATGAGCTGCGCCCATAACCCGTATGGTGATGGTCAg < 2:2964112/93‑1 (MQ=255)
cagcGAATTGTCGAGGAAGTGACGCGTCTTTTAAAAGACGAAAACGAATATCAAGCTATGAGCTGCGCCCATAACCCGTATGGTGATGGTCAg < 2:3568514/93‑1 (MQ=255)
agcGAATTGTCGAGGAAGTGACGCGTCTTTTAAAAGACGAAAACGAATATCAAGCTATGAGCCGCGCCCATAACCCGTATGGTGATGGTCAgg > 2:5447341/1‑93 (MQ=255)
cGAATTGTCGAGGAAGTGACGCGTCTTTTAAAAGACGAAAACGAATATCAAGCTATGAGCCGCGCCCATAACCCGTATGGTGATGGTCAGGCa < 1:3988689/93‑1 (MQ=255)
ttGTCGAGGAAGTGACGCGTCTTTTAAAAGACGAAAACGAATATCAAGCTATGAGCCGCGCCCATAACCCGTATGGTGATGGTCAGGCATGct > 2:4996000/1‑93 (MQ=255)
tGTCGAGGAAGTGACGCGTCTTTTAAAAGACGAAAACGAATATCAAGCTATGAGCTGCGCCCATAACCCGTATGGTGATGGTCAGGCATGctc > 1:250655/1‑93 (MQ=255)
gTCGAGGAAGTGACGCGTCTTTTAAAAGACGAAAACGAATATCAAGCTATGAGCTGCGCCCATAACCCGTATGGTGATGGTCAGGCATGctct < 2:4439969/93‑1 (MQ=255)
gTCGAGGAAGTGACGCGTCTTTTAAAAGACGAAAACGAATATCAAGCTATGAGCTGCGCCCATAACCCGTATGGTGATGGTCAGGCATGctct < 2:5015077/93‑1 (MQ=255)
gTCGAGGAAGTGACGCGTCTTTTAAAAGACGAAAACGAATATCAAGCTATGAGCTGCGCCCATAACCCGTATGGTGATGGTCAGGCATGctct < 1:5664182/93‑1 (MQ=255)
gTCGAGGAAGTGACGCGTCTTTTAAAAGACGAAAACGAATATCAAGCTATGAGCCGCGCCCATAACCCGTATGGTGATGGTCAGGCATGctct < 2:1624873/93‑1 (MQ=255)
gTCGAGGAAGTGACGCGTCTTTTAAAAGACGAAAACGAATATCAAGCTATGAGCCGCGCCCATAACCCGTATGGTGATGGTCAGGCATGctct > 2:5790414/1‑93 (MQ=255)
tCGAGGAAGTGACGCGTCTTTTAAAAGACGAAAACGAATATCAAGCTATGAGCTGCGCCCATAACCCGTATGGTGATGGTCAGGCATGCtctc > 1:3711229/1‑93 (MQ=255)
tCGAGGAAGTGACGCGTCTTTTAAAAGACGAAAACGAATATCAAGCTATGAGCTGCGCCCATAACCCGTATGGTGATGGTCAGGCATGCtctc > 1:2753931/1‑93 (MQ=255)
tCGAGGAAGTGACGCGTCTTTTAAAAGACGAAAACGAATATCAAGCTATGAGCCGCGCCCATAACCCGTATGGTGATGGTCAGGCATGCtctc > 2:3991045/1‑93 (MQ=255)
gAGGAAGTGACGCGTCTTTTAAAAGACGAAAACGAATATCAAGCTATGAGCTGCGCCCATAACCCGTATGGTGATGGTCAGGCATGCTCTCGc < 1:2412258/93‑1 (MQ=255)
aGGAAGTGACGCGTCTTTTAAAAGACGAAAACGAATATCAAGCTATGAGCCGCGCCCATAACCCGTATGGTGATGGTCAGGCATGCTCTCGCa < 1:5516188/93‑1 (MQ=255)
gAAGTGACGCGTCTTTTAAAAGACGAAAACGAATATCAAGCTATGAGCTGCGCCCATAACCCGTATGGTGATGGTCAGGCATGCTCTCGCAtt < 2:3546524/93‑1 (MQ=255)
aaGTGACGCGTCTTTTAAAAGACGAAAACGAATATCAAGCTATGAGCTGCGCCCATAACCCGTATGGTGATGGTCAGGCATGCTCTCGCATTc > 1:5103120/1‑93 (MQ=255)
aaGTGACGCGTCTTTTAAAAGACGAAAACGAATATCAAGCTATGAGCTGCGCCCATAACCCGTATGGTGATGGTCAGGCATGCTCTCGCATTc < 2:2427011/93‑1 (MQ=255)
aaGTGACGCGTCTTTTAAAAGACAAAAACGAATATCAAGCTATGAGCTGCGCCCATAACCCGTATGGTGATGGTCAGGCATGCTCTCGCATTc < 2:5466468/93‑1 (MQ=255)
aGTGACGCGTCTTTTAAAAGACGAAAACGAATATCAAGCTATGAGCTGCGCCCATAACCCGTATGGTGATGGTCAGGCATGCTCTCGCATTCt > 1:5598787/1‑93 (MQ=255)
aGTGACGCGTCTTTTAAAAGACGAAAACGAATATCAAGCTATGAGCCGCGCCCATAACCCGTATGGTGATGGTCAGGCATGCTCTCGCATTCt < 1:2261791/93‑1 (MQ=255)
gTGACGCGTCTTTTAAAAGACGAAAACGAATATCAAGCTATGAGCTGCGCCCATAACCCGTATGGTGATGGTCAGGCATGCTCTCGCATTCTg > 2:1897675/1‑93 (MQ=255)
tGACGCGTCTTTTAAAAGACGAAAACGAATATCAAGCTATGAGCTGCGCCCATAACCCGTATGGTGATGGTCAGGCATGCTCTCGCATTCTgg < 1:5430854/93‑1 (MQ=255)
gACGCGTCTTTTAAAAGACGAAAACGAATATCAAGCTATGAGCTGCGCCCATAACCCGTATGGTGATGGTCAGGCATGCTCTCGCATTCTGGa > 2:5651259/1‑93 (MQ=255)
aCGCGTCTTTTAAAAGACGAAAACGAATATCAAGCTATGAGCTGCGCCCATAACCCGTATGGTGATGGTCAGGCATGCTCTCGCATTCTGGaa < 2:5716035/93‑1 (MQ=255)
aCGCGTCTTTTAAAAGACGAAAACGAATATCAAGCTATGAGCTGCGCCCATAACCCGTATGGTGATGGTCAGGCATGCTCTCGCATTCTGGaa > 2:4580199/1‑93 (MQ=255)
cgcgTCTTTTAAAAGACGAAAACGAATATCAAGCTATGAGCTGCGCCCATAACCCGTATGGTGATGGTCAGGCATGCTCTCGCATTCTGGAAg < 2:796187/93‑1 (MQ=255)
gcgTCTTTTAAAAGACGAAAACGAATATCAAGCTATGAGCTGCGCCCATAACCCGTATGGTGATGGTCAGGCATGCTCTCGCATTCTGGAAGc > 2:3159224/1‑93 (MQ=255)
gcgTCTTTTAAAAGACGAAAACGAATATCAAGCTATGAGCCGCGCCCATAACCCGTATGGTGATGGTCAGGCATGCTCTCGCATTCTGGAAGc < 2:1409972/93‑1 (MQ=255)
cTTTTAAAAGACGAAAACGAATATCAAGCTATGAGCTGCGCCCATAACCCGTATGGTGATGGTCAGGCATGCTCTCGCATTCTGGAAGCGTTa < 1:2678603/93‑1 (MQ=255)
ttttAAAAGACGAAAACGAATATCAAGCTATGAGCCGCGCCCATAACCCGTATGGTGATGGTCAGGCATACTCTCGCATTCTGGAAGCGTTaa > 1:6621836/1‑93 (MQ=255)
tttAAAAGACGAAAACGAATATCAAGCTATGAGCTGCGCCCATAACCCGTATGGTGATGGTCAGGCATGCTCTCGCATTCTGGAAGCGTTaaa > 2:4821764/1‑93 (MQ=255)
tttAAAAGACGAAAACGAATATCAAGCTATGAGCTGCGCCCATAACCCGTATGGTGATGGTCAGGCATGCTCTCGCATTCTGGAAGCGTTaaa > 2:1103277/1‑93 (MQ=255)
ttAAAAGACGAAAACGAATATCAAGCTATGAGCCGCGCCCATAACCCGTATGGTGATGGTCAGGCATGCTCTCGCATTCTGGAAGCGTTaaaa < 2:702927/93‑1 (MQ=255)
aaGACGAAAACGAATATCAAGCTATGAGCTGCGCCCATAACCCGTATGGTGATGGTCAGGCATGCTCTCGCATTCTGGAAGCGTTAAAAaata > 1:2894703/1‑93 (MQ=255)
aGACGAAAACGAATATCAAGCTATGAGCCGCGCCCATAACCCGTATGGTGATGGTCAGGCATGCTCTCGCATTCTGGAAGCGTTAAAAaataa > 1:6509710/1‑93 (MQ=255)
gACGAAAACGAATATCAAGCTATGAGCTGCGCCCATAACCCGTATGGTGATGGTCAGGCATGCTCTCGCATTCTGGAAGCGTTAAAAaataat < 2:1737226/93‑1 (MQ=255)
gACGAAAACGAATATCAAGCTATGAGCTGCGCCCATAACCCGTATGGTGATGGTCAGGCATGCTCTCGCATTCTGGAAGCGTTAAAAaataat > 2:3682658/1‑93 (MQ=255)
gACGAAAACGAATATCAAGCTATGAGCTGCGCCCATAACCCGTATGGTGATGGTCAGGCATGCTCTCGCATTCTGGAAGCGTTAAAAaataat > 2:5177142/1‑93 (MQ=255)
aCGAAAACGAATATCAAGCTATGAGCTGCGCCCATAACCCGTATGGTGATGGTCAGGCATGCTCTCGCATTCTGGAAGCGTTAAAAAATAATc < 2:6054668/93‑1 (MQ=255)
gAAAACGAATATCAAGCTATGAGCTGCGCCCATAACCCGTATGGTGATGGTCAGGCATGCTCTCGCATTCTGGAAGCGTTAAAAAATAATCgg < 2:1248974/93‑1 (MQ=255)
gAAAACGAATATCAAGCTATGAGCTGCGCCCATAACCCGTATGGTGATGGTCAGGCATGCTCTCGCATTCTGGAAGCGTTAAAAAATAATCgg < 1:865011/93‑1 (MQ=255)
gAAAACGAATATCAAGCTATGAGCTGCGCCCATAACCCGTATGGTGATGGTCAGGCATGCTCTCGCATTCTGGAAGCGTTAAAAAATAATCgg < 2:4037398/93‑1 (MQ=255)
gAAAACGAATATCAAGATATGAGCCGCGCCCATAACCCGTATGGTGATGGTCAGGCATGCTCTCGCATTCTGGAAGCGTTAAAAAATAATCgg > 1:1661777/1‑93 (MQ=255)
aaaaCGAATATCAAGCTATGAGCTGCGCCCATAACCCGTATGGTGATGGTCAGGCATGCTCTCGCATTCTGGAAGCGTTAAAAAATAATCGGa > 2:4379579/1‑93 (MQ=255)
aaaCGAATATCAAGCTATGAGCCGCGCCCATAACCCGTATGGTGATGGTCAGGCATGCTCTCGCATTCTGGAAGCGTTAAAAAATAATCGGat < 1:1092839/93‑1 (MQ=255)
aaaCGAATATCAAGCTATGAGCCGCGCCCATAACCCGTATGGTGATGGTCAGGCATGCTCTCGCATTCTGGAAGCGTTAAAAAATAATCGGat > 1:5318272/1‑93 (MQ=255)
aaCGAATATCAAGCTATGAGCCGCGCCCATAACCCGTATGGTGATGGTCAGGCATGCTCTCGCATTCTGGAAGCGTTAAAAAATAATCGGata > 1:187558/1‑93 (MQ=255)
aCGAATATCAAGCTATGAGCTGCGCCCATAACCCGTATGGTGATGGTCAGGCATGCTCTCGCATTCTGGAAGCGTTAAAAAATAATCGGatat < 2:287883/93‑1 (MQ=255)
cGAATATCAAGCTATGAGCTGCGCCCATAACCCGTATGGTGATGGTCAGGCATGCTCTCGCATTCTGGAAGCGTTAAAAAATAATCGGATATc < 1:3533874/93‑1 (MQ=255)
gAATATCAAGCTATGAGCTGCGCCCATAACCCGTATGGTGATGGTCAGGCATGCTCTCGCATTCTGGAAGCGTTAAAAAATAATCGGATATCa < 2:263624/93‑1 (MQ=255)
gAATATCAAGCTATGAGCTGCGCCCATAACCCGTATGGTGATGGTCAGGCATGCTCTCGCATTCTGGAAGCGTTAAAAAATAATCGGATATCa < 1:59507/93‑1 (MQ=255)
gAATATCAAGCTATGAGCCGCGCCCATAACCCGTATGGTGATGGTCAGGCATGCTCTCGCATTCTGGAAGCGTTAAAAAATAATCGGATATCa > 2:6229072/1‑93 (MQ=255)
aaTATCAAGCTATGAGCCGCGCCCATAACCCGTATGGTGATGGTCAGGCATGCTCTCGCATTCTGGAAGCGTTAAAAAATAATCGGATATCAc > 2:2052653/1‑93 (MQ=255)
tatCAAGCTATGAGCTGCGCCCATAACCCGTATGGTGATGGTCAGGCATGCTCTCGCATTCTGGAAGCGTTAAAAAATAATCGGATATCACTa > 2:4495589/1‑93 (MQ=255)
atCAAGCTATGAGCTGCGCCCATAACCCGTATGGTGATGGTCAGGCATGCTCTCGCATTCTGGAAGCGTTAAAAAATAATCGGATATCACTAt < 2:3414072/93‑1 (MQ=255)
tCAAGCTATGAGCTGCGCCCATAACCCGTATGGTGATGGTCAGGCATGCTCTCGCATTCTGGAAGCGTTAAAAAATAATCGGATATCACTATg > 1:114475/1‑93 (MQ=255)
aaGCTATGAGCTGCGCCCATAACCCGTATGGTGATGGTCAGGCATGCTCTCGCATTCTGGAAGCGTTAAAAAATAATCGGATATCACTATGAg > 1:3088628/1‑93 (MQ=255)
aaGCTATGAGCTGCGCCCATAACCCGTATGGTGATGGTCAGGCATGCTCTCGCATTCTGGAAGCGTTAAAAAATAATCGGATATCACTATGAg > 2:305951/1‑93 (MQ=255)
aaGCTATGAGCTGCGCCCATAACCCGTATGGTGATGGTCAGGCATGCTCTCGCATTCTGGAAGCGTTAAAAAATAATCGGATATCACTATGAg > 2:4300107/1‑93 (MQ=255)
gCTATGAGCTGCGCCCATAACCCGTATGGTGATGGTCAGGCATGCTCTCGCATTCTGGAAGCGTTAAAAAATAATCGGATATCACTATGAGtt < 1:3477118/93‑1 (MQ=255)
gCTATGAGCTGCGCCCATAACCCGTATGGTGATGGTCAGGCATGCTCTCGCATTCTGGAAGCGTTAAAAAATAATCGGATATCACTATGAGtt > 2:473409/1‑93 (MQ=255)
gCTATGAGCCGCGCCCATAACCCGTATGGTGATGGTCAGGCATGCTCTCGCATTCTGGAAGCGTTAAAAAATAATCGGATATCACTATGAGtt > 1:4539208/1‑93 (MQ=255)
tATGAGCTGCGCCCATAACCCGTATGGTGATGGTCAGGCATGCTCTCGCATTCTGGAAGCGTTAAAAAATAATCGGATATCACTATGAGtttt > 2:5990150/1‑93 (MQ=255)
tATGAGCTGCGCCCATAACCCGTATGGTGATGGTCAGGCATGCTCTCGCATTCTGGAAGCGTTAAAAAATAATCGGATATCACTATGAGtttt > 2:6136035/1‑93 (MQ=255)
tATGAGCTGCGCCCATAACCCGTATGGTGATGGTCAGGCATGCTCTCGCATTCTGGAAGCGTTAAAAAATAATCGGATATCACTATGAGtttt > 2:6569450/1‑93 (MQ=255)
tGAGCTGCGCCCATAACCCGTATGGTGATGGTCAGGCATGCTCTCGCATTCTGGAAGCGTTAAAAAATAATCGGATATCACTATGAGTTTTGc < 1:3613656/93‑1 (MQ=255)
tGAGCTGCGCCCATAACCCGTATGGTGATGGTCAGGCATGCTCTCGCATTCTGGAAGCGTTAAAAAATAATCGGATATCACTATGAGTTTTGc > 2:1809226/1‑93 (MQ=255)
gAGCTGCGCCCATAACCCGTATGGTGATGGTCAGGCATGCTCTCGCATTCTGGAAGCGTTAAAAAATAATCGGATATCACTATGTGTTTTGCg < 1:3248927/93‑1 (MQ=255)
gAGCTGCGCCCATAACCCGTATGGTGATGGTCAGGCATGCTCTCGCATTCTGGAAGCGTTAAAAAATAATCGGATATCACTATGAGTTTTGCg > 1:4776186/1‑93 (MQ=255)
cgcgCCCATAACCCGTATGGTGATGGTCAGGCATGCTCTCGCATTCTGGAAGCGTTAAAAAATAATCGGATATCACTATGAGTTTTGCGACCa < 2:5073936/93‑1 (MQ=255)
|
ACGGTGCGTCTGGTAGGCACGGATAAGCAGCGAATTGTCGAGGAAGTGACGCGTCTTTTAAAAGACGAAAACGAATATCAAGCTATGAGCCGCGCCCATAACCCGTATGGTGATGGTCAGGCATGCTCTCGCATTCTGGAAGCGTTAAAAAATAATCGGATATCACTATGAGTTTTGCGACCA > NC_000913/3968705‑3968887
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
GGTACGGTGCGTCTGGTAGGCACGGATAAGCAGCGAATTGTCGAGGAAGTGACGCGTCTTTTAAAAGACGAAAACGAATATCAAGCTATGAGCCGCGCCCATAACCCGTATGGTGATGGTCAGGCATGCTCTCGCATTCTGGAAGCGTTAAAAAATAATCGGATATCACTATGAGTTTTGCGACCAT > NC_000913/3968702‑3968888
|
GGTACGGTGCGTCTGGTAGGCACGGATAAGCAGCGAATTGTCGAGGAAGTGACGCGTCTTTTAAAAGACGAAAACGAATATCAAGCTATGAGCT > SRR4302547.1885177/1‑94 (MQ=60)
GTACGGTGCGTCTGGTAGGCACGGATAAGCAGCGAATTGTCGAGGAAGTGACGCGTCTTTTAAAAGACGAAAACGAATATCAAGCTATGAGCTG > SRR4302547.4269768/1‑94 (MQ=60)
GTACGGTGCGTCTGGTAGGCACGGATAAGCAGCGAATTGTCGAGGAAGTGACGCGTCTTTTAAAAGACGAAAACGAATATCAAGCTATGAGCTG > SRR4302547.6378807/1‑94 (MQ=60)
TACGGTGCGTCTGGTAGGCACGGATAAGCAGCGAATTGTCGAGGAAGTGACGCGTCTTTTAAAAGACGAAAACGAATATCAAGCTATGAGCTGC > SRR4302547.6007805/1‑94 (MQ=60)
GGTGCGTCTGGTAGGCACGGATAAGCAGCGAATTGTCGAGGAAGTGACGCGTCTTTTAAAAGACGAAAACGAATATCAAGCTATGAGCTGCGCC < SRR4302547.208862/94‑1 (MQ=60)
GGTGCGTCTGGTAGGCACGGATAAGCAGCGAATTGTCGAGGAAGTGACGCGTCTTTTAAAAGACGAAAACGAATATCAAGCTATGAGCTGCGCC < SRR4302547.4937599/94‑1 (MQ=60)
GTGCGTCTGGTAGGCACGGATAAGCAGCGAATTGTCGAGGAAGTGACGCGTCTTTTAAAAGACGAAAACGAATATCAAGCTATGAGCTGCGCCC < SRR4302547.2882776/94‑1 (MQ=60)
GTGCGTCTGGTAGGCACGGATAAGCAGCGAATTGTCGAGGAAGTGACGCGTCTTTTAAAAGACGAAAACGAATATCAAGCTATGAGCTGCGCCC < SRR4302547.520559/94‑1 (MQ=60)
TGCGTCTGGTAGGCACGGATAAGCAGCGAATTGTCGAGGAAGTGACGCGTCTTTTAAAAGACGAAAACGAATATCAAGCTATGAGCTGCGCCCA < SRR4302547.3596449/94‑1 (MQ=60)
TGCGTCTGGTAGGCACGGATAAGCAGCGAATTGTCGAGGAAGTGACGCGTCTTTTAAAAGACGAAAACGAATATCAAGCTATGAGCCGCGCCCA < SRR4302547.3963349/94‑1 (MQ=60)
TGCGTCTGGTAGGCACGGATAAGCAGCGAATTGTCGAGGAAGTGACGCGTCTTTTAAAAGACGAAAACGAATATCAAGCTATGAGCCGCGCCCA < SRR4302547.791380/94‑1 (MQ=60)
GGCGTCTGGTAGGCACGGATAAGCAGCGAATTGTCGAGGAAGTGACGCGTCTTTTAAAAGACGAAAACGAATATCAAGCTATGAGCTGCGCCCA < SRR4302547.1511563/94‑1 (MQ=60)
GCGTCTGGTAGGCACGGATAAGCAGCGAATTGTCGAGGAAGTGACGCGTCTTTTAAAAGACGAAAACGAATATCAAGCTATGAGCCGCGCCCAT > SRR4302547.2101252/1‑94 (MQ=60)
GTCTGGTAGGCACGGATAAGCAGCGAATTGTCGAGGAAGTGACGCGTCTTTTAAAAGACGAAAACGAATATCAAGCTATGAGCTGCGCCCATAA > SRR4302547.973284/1‑94 (MQ=60)
GTCTGGTAGGCACGGATAAGCAGCGAATTGTCGAGGAAGTGACGCGTCTTTTAAAAGACGAAAACGAATATCAAGCTATGAGCCGCGCCCATAA < SRR4302547.2616701/94‑1 (MQ=60)
TCTGGTAGGCACGGATAAGCAGCGAATTGTCGAGGAAGTGACGCGTCTTTTAAAAGACGAAAACGAATATCAAGCTATGAGCTGCGCCCATAAC < SRR4302547.118403/94‑1 (MQ=60)
TCTGGTAGGCACGGATAAGCAGCGAATTGTCGAGGAAGTGACGCGTCTTTTAAAAGACGAAAACGAATATCAAGCTATGAGCTGCGCCCATAAC < SRR4302547.2951/94‑1 (MQ=60)
CTGGTAGGCACGGATAAGCAGCGAATTGTCGAGGAAGTGACGCGTCTTTTAAAAGACGAAAACGAATATCAAGCTATGAGCTGCGCCCATAACC < SRR4302547.323607/94‑1 (MQ=60)
CTGGTAGGCACGGATAAGCAGCGAATTGTCGAGGAAGTGACGCGTCTTTTAAAAGACGAAAACGAATATCAAGCTATGAGCTGCGCCCATAACC > SRR4302547.1295176/1‑94 (MQ=60)
CTGGTAGGCACGGATAAGCAGCGAATTGTCGAGGAAGTGACGCGTCTTTTAAAAGACGAAAACGAATATCAAGCTATGAGCTGCGCCCATAACC > SRR4302547.2150779/1‑94 (MQ=60)
GTAGGCACGGATAAGCAGCGAATTGTCGAGGAAGTGACGCGTCTTTTAAAAGACGAAAACGAATATCAAGCTATGAGCTGCGCCCATAACCCGT < SRR4302547.5061300/94‑1 (MQ=60)
GTAGGCACGGATAAGCAGCGAATTGTCGAGGAAGTGACGCGTCTTTTAAAAGACGAAAACGAATATCAAGCTATGAGCTGCGCCCATAACCCGT > SRR4302547.3275045/1‑94 (MQ=60)
GTAGGCACGGATAAGCAGCGAATTGTCGAGGAAGTGACGCGTCTTTTAAAAGACGAAAACGAATATCAAGCTATGAGCTGCGCCCATAACCCGT < SRR4302547.528685/94‑1 (MQ=60)
GTAGGCACGGATAAGCAGCGAATTGTCGAGGAAGTGACGCGTCTTTTAAAAGACGAAAACGAATATCAAGCTATGAGCTGCGCCCATAACCCGT < SRR4302547.5978520/94‑1 (MQ=60)
AGGCACGGATAAGCAGCGAATTGTCGAGGAAGTGACGCGTCTTTTAAAAGACGAAAACGAATATCAAGCTATGAGCTGCGCCCATAACCCGTAT > SRR4302547.1019867/1‑94 (MQ=60)
AGGCACGGATAAGCAGCGAATTGTCGAGGAAGTGACGCGTCTTTTAAAAGACGAAAACGAATATCAAGCTATGAGCTGCGCCCATAACCCGTAT > SRR4302547.551336/1‑94 (MQ=60)
AGGCACGGATAAGCAGCGAATTGTCGAGGAAGTGACGCGTCTTTTAAAAGACGAAAACGAATATCAAGCTATGAGCTGCGCCCATAACCCGTAT > SRR4302547.6398859/1‑94 (MQ=60)
AGGCACGGATAAGCAGCGAATTGTCGAGGAAGTGACGCGTCTTTTAAAAGACGAAAACGAATATCAAGCTATGAGCTGCGCCCATAACCCGTAT > SRR4302547.2561756/1‑94 (MQ=60)
AGGCACGGATAAGCAGCGAATTGTCGAGGAAGCGACGCGTCTTTTAAAAGACGAAAACGAATATCAAGCTATGAGCTGCGCCCCTAACTCGTAT > SRR4302547.617186/1‑94 (MQ=60)
GGCACGGATAAGCAGCGAATTGTCGAGGAAGTGACGCGTCTTTTAAAAGACGAAAACGAATATCAAGCTATGAGCTGCGCCCATAACCCGTATG < SRR4302547.418653/94‑1 (MQ=60)
GGCACGGATAAGCAGCGAATTGTCGAGGAAGTGACGCGTCTTTTAAAAGACGAAAACGAATATCAAGCTATGAGCTGCGCCCATAACCCGTATG < SRR4302547.2782017/94‑1 (MQ=60)
GCACGGATAAGCAGCGAATTGTCGAGGAAGTGACGCGTCTTTTAAAAGACGAAAACGAATATCAAGCTATGAGCTGCGCCCATAACCCGTATGG < SRR4302547.1880819/94‑1 (MQ=60)
CACGGATAAGCAGCGAATTGTCGAGGAAGTGACGCGTCTTTTAAAAGACGAAAACGAATATCAAGCTATGAGCTGCGCCCATAACCCGTATGGG > SRR4302547.6526877/1‑94 (MQ=60)
CACGGATAAGCAGCGAATTGTCGAGGAAGTGACGCGTCTTTTAAAAGACGAAAACGAATATCAAGCTATGAGCCGCGCCCATAACCCGTATGGT < SRR4302547.433425/94‑1 (MQ=60)
CGGATAAGCAGCGAATTGTCGAGGAAGTGACGCGTCTTTTAAAAGACGAAAACGAATATCAAGCTATGAGCTGCGCCCATAACCCGTATGGTGA > SRR4302547.381150/1‑94 (MQ=60)
CGGATAAGCAGCGAATTGTCGAGGAAGTGACGCGTCTTTTAAAAGACGAAAACGAATATCAAGCTATGAGCTGCGCCCATAACCCGTATGGTGA > SRR4302547.689393/1‑94 (MQ=60)
GGATAAGCAGCGAATTGTCGAGGAAGTGATGCGTCTTTTAAAAAAAGAAAATGTATCTCAAGCTTAGAACAACGCCCATAACCCGTATGGTGGT > SRR4302547.3495989/1‑94 (MQ=30)
GGATAAGCAGCGAATTGTCGAGGAAGTGACGCGTCTTTTAAAAGACGAAAACGAATATCAAGCTATGAGCTGCGCCCATAACCCGTATGGTGAT < SRR4302547.2888849/94‑1 (MQ=60)
GATAAGCAGCGAATTGTCGAGGAAGTGACGCGTCTTTTAAAAGACGAAAACGAATATCAAGCTATGAGCTGCGCCCATAACCCGTATGGTGATG > SRR4302547.1995481/1‑94 (MQ=60)
ATAAGCAGCGAATTGTCGAGGAAGTGACGCGTCTTTTAAAAGACGAAAACGAATATCAAGCTATGAGCTGCGCCCATAACCCGTATGGTGATGG < SRR4302547.2193501/94‑1 (MQ=60)
ATAAGCAGCGAATTGTCGAGGAAGTGACGCGTCTTTTAAAAGACGAAAACGAATATCAAGCTATGAGCTGCGCCCATAACCCGTATGGTGATGG > SRR4302547.760390/1‑94 (MQ=60)
taaggatcgaattttcaacGAAGTGACGTGTCTTTTAAAAGACAAAAGCGAATGTCAAGCTAGGAGCCGCGCCCATAACCCGTATGGTGATGGT < SRR4302547.5463307/75‑1 (MQ=60)
AGCAGCGAATTGTCGAGGAAGTGACGCGTCTTTTAAAAGACGAAAACGAATATCAAGCTATGAGCTGCGCCCATAACCCGTATGGTGATGGTCA < SRR4302547.225179/94‑1 (MQ=60)
AGCAGCGAATTGTCGAGGAAGTGACGCGTCTTTTAAAAGACGAAAACGAATATCAAGCTATGAGCTGCGCCCATAACCCGTATGGTGATGGTCA > SRR4302547.6267040/1‑94 (MQ=60)
GCAGCGAATTGTCGAGGAAGTGACGCGTCTTTTAAAAGACGAAAACGAATATCAAGCTATGAGCTGCGCCCATAACCCGTATGGTGATGGTCAG < SRR4302547.587439/94‑1 (MQ=60)
GCAGCGAATTGTCGAGGAAGTGACGCGTCTTTTAAAAGACGAAAACGAATATCAAGCTATGAGCTGCGCCCATAACCCGTATGGTGATGGTCAG < SRR4302547.87040/94‑1 (MQ=60)
AGCGAATTGTCGAGGAAGTGACGCGTCTTTTAAAAGACGAAAACGAATATCAAGCTATGAGCTGCGCCCATAACCCGTATGGTGATGGTCAGGC > SRR4302547.4649858/1‑94 (MQ=60)
GCGAATTGTCGAGGAAGTGACGCGTCTTTTAAAAGACGAAAACGAATATCAAGCTATGAGCTGCGCCCATAACCCGTATGGTGATGGTCAGGCA < SRR4302547.1563777/94‑1 (MQ=60)
GCGAATTGTCGAGGAAGTGACGCGTCTTTTAAAAGACGAAAACGAATATCAAGCTATGAGCCGCGCCCATAACCCGTATGGTGATGGTCAGGCA > SRR4302547.1033238/1‑94 (MQ=60)
CGAATTGTCGAGGAAGTGACGCGTCTTTTAAAAGACGAAAACGAATATCAAGCTATGAGCCGCGCCCATAACCCGTATGGTGATGGTCAGGCAT < SRR4302547.4069791/94‑1 (MQ=60)
GAATTGTCGAGGAAGTGACGCGTCTTTTAAAAGACGAAAACGAATATCAAGCTATGAGCTGCGCCCATAACCCGTATGGTGATGGTCAGGCATG < SRR4302547.5649023/94‑1 (MQ=60)
ATTGTCGAGGAAGTGACGCGTCTTTTAAAAGACGAAAACGAATATCAAGCTATGAGCTGCGCCCATAACCCGTATGGTGATGGTCAGGCATGCT > SRR4302547.2496927/1‑94 (MQ=60)
ATTGTCGAGGAAGTGACGCGTCTTTTAAAAGACGAAAACGAATATCAAGCTATGAGCTGCGCCCATAACCCGTATGGTGATGGTCAGGCATGCT > SRR4302547.922258/1‑94 (MQ=60)
ATTGTCGAGGAAGTGACGCGTCTTTTAAAAGACGAAAACGAATATCAAGCTATGAGACGCGCCCATAACCCGTATGGTGATGGTCAGGCATGCT > SRR4302547.898295/1‑94 (MQ=60)
TTGTCGAGGAAGTGACGCGTCTTTTAAAAGACGAAAACGAATATCAAGCTATGAGCTGCGCCCATAACCCGTATGGTGATGGTCAGGCATGCTC > SRR4302547.255342/1‑94 (MQ=60)
TGTCGAGGAAGTGACGCGTCTTTTAAAAGACGAAAACGAATATCAAGCTATGAGCTGCGCCCATAACCCGTATGGTGATGGTCAGGCATGCTCT < SRR4302547.4896019/94‑1 (MQ=60)
GTCGAGGAAGTGACGCGTCTTTTAAAAGACGAAAACGAATATCAAGCTATGAGCTGCGCCCATAACCCGTATGGTGATGGTCAGGCATGCTCTC < SRR4302547.5977187/94‑1 (MQ=60)
GTCGAGGAAGTGACGCGTCTTTTAAAAGACGAAAACGAATATCAAGCTATGAGCTGCGCCCATAACCCGTATGGTGATGGTCAGGCATGCTCTC > SRR4302547.3786986/1‑94 (MQ=60)
GTCGAGGAAGTGACGCGTCTTTTAAAAGACGAAAACGAATATCAAGCTATGAGCTGCGCCCATAACCCGTATGGTGATGGTCAGGCATGCTCTC < SRR4302547.5136845/94‑1 (MQ=60)
GTCGAGGAAGTGACGCGTCTTTTAAAAGACGAAAACGAATATCAAGCTATGAGCTGCGCCCATAACCCGTATGGTGATGGTCAGGCATGCTCTC < SRR4302547.5781120/94‑1 (MQ=60)
GTCGAGGAAGTGACGCGTCTTTTAAAAGACGAAAACGAATATCAAGCTATGAGCTGCGCCCATAACCCGTATGGTGATGGTCAGGCATGCTCTC > SRR4302547.2809139/1‑94 (MQ=60)
TCGAGGAAGTGACGCGTCTTTTAAAAGACGAAAACGAATATCAAGCTATGAGCTGCGCCCATAACCCGTATGGTGATGGTCAGGCATGCTCTCG > SRR4302547.5483790/1‑94 (MQ=60)
TCGAGGAAGTGACGCGTCTTTTAAAAGACGAAAACGAATATCAAGCTATGAGCTGCGCCCATAACCCGTATGGTGATGGTCAGGCATGCTCTCG < SRR4302547.1241346/94‑1 (MQ=60)
TCGAGGAAGTGACGCGTCTTTTAAAAGACGAAAACGAATATCAAGCTATGAGCTGCGCCCATAACCCGTATGGTGATGGTCAGGCATGCTCTCG > SRR4302547.6647997/1‑94 (MQ=60)
TCGAGGAAGTGACGCGTCTTTTAAAAGACGAAAACGAATATCAAGCTATGAGCTGCGCCCATAACCCGTATGGTGATGGTCAGGCATGCTCTCG > SRR4302547.5077111/1‑94 (MQ=60)
CGAGGAAGTGACGCGTCTTTTAAAAGACGAAAACGAATATCAAGCTATGAGCTGCGCCCATAACCCGTATGGTGATGGTCAGGCATGCTCTCGC < SRR4302547.159004/94‑1 (MQ=60)
CGAGGAAGTGACGCGTCTTTTAAAAGACGAAAACGAATATCAAGCTATGAGCTGCGCCCATAACCCGTATGGTGATGGTCAGGCATGCTCTCGC > SRR4302547.387040/1‑94 (MQ=60)
GAGGAAGTGACGCGTCTTTTAAAAGACGAAAACGAATATCAAGCTATGAGCTGCGCCCATAACCCGTATGGTGATGGTCAGGCATGCTCTCGCA < SRR4302547.2461094/94‑1 (MQ=60)
GAGGAAGTGACGCGTCTTTTAAAAGACGAAAACGAATATCAAGCTATGAGCTGCGCCCATAACCCGTATGGTGATGGTCAGGCATGCTCTCGCA > SRR4302547.48036/1‑94 (MQ=60)
AGGAAGTGACGCGTCTTTTAAAAGACGAAAACGAATATCAAGCTATGAGCCGCGCCCATAACCCGTATGGTGATGGTCAGGCATGCTCTCGCAT < SRR4302547.5630069/94‑1 (MQ=60)
GGAAGTGACGCGTCTTTTAAAAGACGAAAACGAATATCAAGCTATGAGCTGCGCCCATAACCCGTATGGTGATGGTCAGGCATGCTCTCGCATT > SRR4302547.1782732/1‑94 (MQ=60)
GAAGTGACGCGTCTTTTAAAAGACGAAAACGAATATCAAGCTATGAGCTGCGCCCATAACCCGTATGGTGATGGTCAGGCATGCTCTCGCATTC > SRR4302547.2040909/1‑94 (MQ=60)
GAAGTGACGCGTCTTTTAAAAGACGAAAACGAATATCAAGCTATGAGCTGCGCCCATAACCCGTATGGTGATGGTCAGGCATGCTCTCGCATTC > SRR4302547.5208313/1‑94 (MQ=60)
GAAGTGACGCGTCTTTTAAAAGACGAAAACGAATATCAAGCTATGAGCTGCGCCCATAACCCGTATGGTGATGGTCAGGCATGCTCTCGCATTC < SRR4302547.5344759/94‑1 (MQ=60)
GAAGTGACGCGTCTTTTAAAAGACGAAAACGAATATCAAGCTATGAGCTGCGCCCATAACCCGTATGGTGATGGTCAGGCATGCTCTCGCATTC < SRR4302547.3396572/94‑1 (MQ=60)
AAGTGACGCGTCTTTTAAAAGACGAAAACGAATATCAAGCTATGAGCTGCGCCCATAACCCGTATGGTGATGGTCAGGCATGCTCTCGCATTCT > SRR4302547.5714277/1‑94 (MQ=60)
AGTGACGCGTCTTTTAAAAGACGAAAACGAATATCAAGCTATGAGCTGCGCCCATAACCCGTATGGTGATGGTCAGGCATGCTCTCGCATTCTG > SRR4302547.4563408/1‑94 (MQ=60)
AGTGACGCGTCTTTTAAAAGACGAAAACGAATATCAAGCTATGAGCCGCGCCCATAACCCGTATGGTGATGGTCAGGCATGCTCTCGCATTCTG > SRR4302547.2852938/1‑94 (MQ=60)
AGTGACGCGTCTTTTAAAAGACGAAAACGAATATCAAGCTATGAGCCGCGCCCATAACCCGTATGGTGATGGTCAGGCATGCTCTCGCATTCTG < SRR4302547.2307488/94‑1 (MQ=60)
TGACGCGTCTTTTAAAAGACGAAAACGAATATCAAGCTATGAGCTGCGCCCATAACCCGTATGGTGATGGTCAGGCATGCTCTCGCATTCTGGA > SRR4302547.2905610/1‑94 (MQ=60)
TGACGCGTCTTTTAAAAGACGAAAACGAATATCAAGCTATGAGCTGCGCCCATAACCCGTATGGTGATGGTCAGGCATGCTCTCGCATTCTGGA < SRR4302547.5543136/94‑1 (MQ=60)
GACGCGTCTTTTAAAAGACGAAAACGAATATCAAGCTATGAGCTGCGCCCATAACCCGTATGGTGATGGTCAGGCATGCTCTCGCATTCTGGAA < SRR4302547.6499597/94‑1 (MQ=60)
GACGCGTCTTTTAAAAGACGAAAACGAATATCAAGCTATGAGCTGCGCCCATAACCCGTATGGTGATGGTCAGGCATGCTCTCGCATTCTGGAA > SRR4302547.5054500/1‑94 (MQ=60)
GACGCGTCTTTTAAAAGACGAAAACGAATATCAAGCTATGAGCTGCGCCCATAACCCGTATGGTGATGGTCAGGCATGCTCTCGCATTCTGGAA < SRR4302547.2772415/94‑1 (MQ=60)
GACGCGTCTTTTAAAAGACGAAAACGAATATCAAGCTATGAGCTGCGCCCATAACCCGTATGGTGATGGTCAGGCATGCTCTCGCATTCTGGAA < SRR4302547.6466534/94‑1 (MQ=60)
GACGCGTCTTTTAAAAGACGAAAACGAATATCAAGCTATGAGCTGCGCCCATAACCCGTATGGCGATGGTCAGGCATGCTCTCGCATTCTGGAA > SRR4302547.6208638/1‑94 (MQ=60)
ACGCGTCTTTTAAAAGTGGAAAACGAATATCAAGATATAAGCTGCGAACATAACCCGTATGGTGATGGACAGGCATGCACTCGCCTTCTGGGAG > SRR4302547.5438594/1‑94 (MQ=36)
ACGCGTCTTTTAAAAGACGAAAACGAATATCAAGCTATGAGCTGCGCCCATAACCCGTATGGTGATGGTCAGGCATGCTCTCGCATTCTGGAAG < SRR4302547.4283283/94‑1 (MQ=60)
ACGCGTCTTTTAAAAGACGAAAACGAATATCAAGCTATGAGCTGCGCCCATAACCCGTATGGTGATGGTCAGGCATGCTCTCGCATTCTGGAAG < SRR4302547.4229194/94‑1 (MQ=60)
ACGCGTCTTTTAAAAGACGAAAACGAATATCAAGCTATGAGCTGCGCCCATAACCCGTATGGTGATGGTCAGGCATGCTCTCGCATTCTGGAAG < SRR4302547.4145133/94‑1 (MQ=60)
ACGCGTCTTTTAAAAGACGAAAACGAATATCAAGCTATGAGCCGCGCCCATAACCCGTATGGTGATGGTCAGGCATGCTCTCGCATTCTGGAAG < SRR4302547.572/94‑1 (MQ=60)
CTCGTCTGTTAAGAGACGAAAACGAATATCAAGATATGAGCTGCGCCCATAACCCGTATGGTGATGGTCAGGCATGCTCTCGCATTCTGGAAGC < SRR4302547.3603049/94‑1 (MQ=60)
CGCGTCTTTTAAAAGACGAAAACGAATATCAAGCTATGAGCTGCGCCCATAACCCGTATGGTGATGGTCAGGCATGCTCTCGCATTCTGGAAGC > SRR4302547.5657942/1‑94 (MQ=60)
GCGTCTTTTAAAAGACGAAAACGAATATCAAGCTATGAGCTGCGCCCATAACCCGTATGGTGATGGTCAGGCATGCTCTCGCATTCTGGAAGCG > SRR4302547.4565339/1‑94 (MQ=60)
GCGTCTTTTAAAAGACGAAAACGAATATCAAGCTATGAGCTGCGCCCATAACCCGTATGGTGATGGTCAGGCATGCTCTCGCATTCTGGAAGCG < SRR4302547.338070/94‑1 (MQ=60)
GTCTTTTAAAAGACGAAAACGAATATCAAGCTATGAGCTGCGCCCATAACCCGTATGGTGATGGTCAGGCATGCTCTCGCATTCTGGAAGCGTT < SRR4302547.775100/94‑1 (MQ=60)
GTCTTTTAAAAGACGAAAACGAATATCAAGCTATGAGCTGCGCCCATAACCCGTATGGTGATGGTCAGGCATGCTCTCGCATTCTGGAAGCGTT > SRR4302547.5590093/1‑94 (MQ=60)
TCTTTTAAAAGACGAAAACGAATATCAAGCTATGAGCTGCGCCCATAACCCGTATGGTGATGGTCAGGCATGCTCTCGCATTCTGGAAGCGTTA > SRR4302547.1913272/1‑94 (MQ=60)
TCTTTTAAAAGACGAAAACGAATATCAAGCTATGAGCTGCGCCCATAACCCGTATGGTGATGGTCAGGCATGCTCTCGCATTCTGGAAGCGTTA < SRR4302547.2713654/94‑1 (MQ=60)
CTTTTAAAAGACGAAAACGAATATCAAGCTATGAGCTGCGCCCATAACCCGTATGGTGATGGTCAGGCATGCTCTCGCATTCTGGAAGCGTTAA < SRR4302547.2732394/94‑1 (MQ=60)
CTTTTAAAAGACGAAAACGAATATCAAGCTATGAGCCGCGCCCATAACCCGTATGGTGATGGTCAGGCATACTCTCGCATTCTGGAAGCGTTAA > SRR4302547.6759667/1‑94 (MQ=60)
TTTAAAAGACGAAAACGAATATCAAGCTATGAGCTGCGCCCATAACCCGTATGGTGATGGTCAGGCATGCTCTCGCATTCTGGAAGCGTTAAAA > SRR4302547.6028852/1‑94 (MQ=60)
TTAAAAGACGAAAACGAATATCAAGCTATGAGCTGCGCCCATAACCCGTATGGTGATGGTCAGGCATGCTCTCGCATTCTGGAAGCGTTAAAAA > SRR4302547.5093823/1‑94 (MQ=60)
AAAGACGAAAACGAATATCAAGCTATGAGCTGCGCCCATAACCCGTATGGTGATGGTCAGGCATGCTCTCGCATTCTGGAAGCGTTAAAAAATA > SRR4302547.2952438/1‑94 (MQ=60)
AAGACGATAACGAATATCAAGCTATGAGCTGCGCCCATAACCCGTATGGTGATGGTCAGGCATGCTCTCGCATTCTGGAAGCGTTAAAAAATAA < SRR4302547.862940/94‑1 (MQ=60)
AAGACGAAAACGAATATCAAGCTATGAGCTGCGCCCATAGCCCGTATGGTGATGATCAGGCATGCTCTCGCATTCTGGAAGCGTTAAAAAATAA < SRR4302547.3214042/94‑1 (MQ=60)
AAGACGAAAACGAATATCAAGCTATGAGCTGCGCCCATAACCCGTATGGTGATGGTCAGGCATGCTCTCGCATTCTGGAAGCGTTAAAAAATAA < SRR4302547.2377459/94‑1 (MQ=60)
AAGACGAAAACGAATATCAAGCTATGAGCTGCGCCCATAACCCGTATGGTGATGGTCAGGCATGCTCTCGCATTCTGGAAGCGTTAAAAAATAA > SRR4302547.4962843/1‑94 (MQ=60)
AAGACGAAAACGAATATCAAGCTATGAGCCGCGCCCATAACCCGTATGGTGATGGTCAGGCATGCTCTCGCATTCTGGAAGCGTTAAAAAATAA > SRR4302547.6645241/1‑94 (MQ=60)
AGACGAAAACGAATATCAAGCTATGAGCTGCGCCCATAACCCGTATGGTGATGGTCAGGCATGCTCTCGCATTCTGGAAGCGTTAAAAAATAAT < SRR4302547.5592510/94‑1 (MQ=60)
GACGAAAACGAATATCAAGCTATGAGCTGCGCCCATAACCCGTATGGTGATGGTCAGGCATGCTCTCGCATTCTGGAAGCGTTAAAAAATAATC < SRR4302547.13567/94‑1 (MQ=60)
ACGAAAACGAATATCAAGCTATGAGCTGCGCCCATAACCCGTATGGTGATGGTCAGGCATGCTCTCGCATTCTGGAAGCGTTAAAAAATAATCG > SRR4302547.4055933/1‑94 (MQ=60)
CGAAAACGAATATCAAGCTATGAGCCGCGCCCATAACCCGTATGGTGATGGTCAGGCATGCTCTCGCATTCTGGAAGCGTTAAAAAATAATCGG > SRR4302547.735814/1‑94 (MQ=60)
CGAAAACGAATATCAAGATATGAGCCGCGCCCATAACCCGTATGGTGATGGTCAGGCATGCTCTCGCATTCTGGAAGCGTTAAAAAATAATCGG > SRR4302547.1694539/1‑94 (MQ=60)
GAAAACGAATATCAAGCTATGAGCTGCGCCCATAACCCGTATGGTGATGGTCAGGCATGCTCTCGCATTCTGGAAGCGTTAAAAAATAATCGGA < SRR4302547.881561/94‑1 (MQ=60)
AAAACGAATATCAAGCTATGAGCTGCGCCCATAACCCGTATGGTGATGGTCAGGCATGCTCTCGCATTCTGGAAGCGTTAAAAAATAATCGGAT < SRR4302547.2955622/94‑1 (MQ=60)
AAAACGAATATCAAGCTATGAGCCGCGCCCATAACCCGTATGGTGATGGTCAGGCATGCTCTCGCATTCTGGAAGCGTTAAAAAATAATCGGAT > SRR4302547.5427935/1‑94 (MQ=60)
AAAACGAATATCAAGCTATGAGCCGCGCCCATAACCCGTATGGTGATGGTCAGGCATGCTCTCGCATTCTGGAAGCGTTAAAAAATAATCGGAT < SRR4302547.3620732/94‑1 (MQ=60)
AAACGAATATCAAGCTATGAGCTGCGCCCATAACCCGTATGGTGATGGTCAGGCATGCTCTCGCATTCTGGAAGCGTTAAAAAATAATCGGATA > SRR4302547.4462590/1‑94 (MQ=60)
AAACGAATATCAAGCTATGAGCTGCGCCCATAACCCGTATGGTGATGGTCAGGCATGCTCTCGCATTCTGGAAGCGTTAAAAAATAATCGGATA < SRR4302547.5721364/94‑1 (MQ=60)
AAACGAATATCAAGCTATGAGCCGCGCCCATAACCCGTATGGTGATGGTCAGGCATGCTCTCGCATTCTGGAAGCGTTAAAAAATAATCGGATA > SRR4302547.191093/1‑94 (MQ=60)
AAACGAATATCAAGCTATGAGCCGCGCCCATAACCCGTATGGTGATGGTCAGGCATGCTCTCGCATTCTGGAAGCGTTAAAAAATAATCGGATA < SRR4302547.1114748/94‑1 (MQ=60)
AACGAATATCAAGCTATGAGCTGCGCCCATAACCCGTATGGTGATGGTCAGGCATGCTCTCGCATTCTGGAAGCGTTAAAAAATAATCGGATAT < SRR4302547.5622585/94‑1 (MQ=60)
AACGAATATCAAGCTATGAGCTGCGCCCATAACCCGTATGGTGATGGTCAGGCATGCTCTCGCATTCTGGAAGCGTTAAAAAATAATCGGATAT > SRR4302547.705037/1‑94 (MQ=60)
AACGAATATCAAGCTATGAGCTGCGCCCATAACCCGTATGGTGATGGTCAGGCATGCTCTCGCATTCTGGAAGCGTTAAAAAATAATCGGATAT < SRR4302547.375493/94‑1 (MQ=60)
CGAATATCAAGCTATGAGCTGCGCCCATAACCCGTATGGTGATGGTCAGGCATGCTCTCGCATTCTGGAAGCGTTAAAAAATAATCGGATATCA > SRR4302547.2849698/1‑94 (MQ=60)
CGAATATCAAGCTATGAGCTGCGCCCATAACCCGTATGGTGATGGTCAGGCATGCTCTCGCATTCTGGAAGCGTTAAAAAATAATCGGATATCA > SRR4302547.4926740/1‑94 (MQ=60)
CGAATATCAAGCTATGAGCTGCGCCCATAACCCGTATGGTGATGGTCAGGCATGCTCTCGCATTCTGGAAGCGTTAAAAAATAATCGGATATCA < SRR4302547.3606034/94‑1 (MQ=60)
GAATATCAAGCTATGAGCTGCGCCCATAACCCGTATGGTGATGGTCAGGCATGCTCTCGCATTCTGGAAGCGTTAAAAAATAATCGGATATCAC > SRR4302547.1064269/1‑94 (MQ=60)
GAATATCAAGCTATGAGCTGCGCCCATAACCCGTATGGTGATGGTCAGGCATGCTCTCGCATTCTGGAAGCGTTAAAAAATAATCGGATATCAC < SRR4302547.60627/94‑1 (MQ=60)
ACTATCAAGCTATGAGCTGCGCCCATAACCCGTATGGTGATGGTCAGGCATGCTCTCGCATTCTGGAAGCGTTAAAAAATAATCGGATATAACT > SRR4302547.5929681/1‑94 (MQ=60)
ATATCAAGCTATGAGCTGCGCCCATAACCCGTATGGTGATGGTCAGGCATGCTCTCGCATTCTGGAAGCGTTAAAAAATAATCGGATATCACTA < SRR4302547.3599393/94‑1 (MQ=60)
TATCAAGCTATGAGCTGCGCCCATAACCCGTATGGTGATGGTCAGGCATGCTCTCGCATTCTGGAAGCGTTAAAAAATAATCGGATATCACTAT < SRR4302547.2317151/94‑1 (MQ=60)
TATCAAGCTATGAGCTGCGCCCATAACCCGTATGGTGATGGTCAGGCATGCTCTCGCATTCTGGAAGCGTTAAAAAATAATCGGATATCACTAT < SRR4302547.6723248/94‑1 (MQ=60)
GATCAAGCTATGAGCTGCGCCCATAACCCGTATGGTGATGGTCAGGCATGCTCTCGCATTCTGGAAGCGTTAAAAAATAATCGGATATCACTAT < SRR4302547.767140/94‑1 (MQ=60)
ATCAAGCTATGAGCTGCGCCCATAACCCGTATGGTGATGGTCAGGCATGCTCTCGCATTCTGGAAGCGTTAAAAAATAATCGGATATCACTATG > SRR4302547.116557/1‑94 (MQ=60)
CAAGCTATGAGCTGCGCCCATAACCCGTATGGTGATGGTCAGGCATGCTCTCGCATTCTGGATGCGTTAAAAAATAATCGGATATCACTATGAG < SRR4302547.1547165/94‑1 (MQ=60)
CAAGCTATGAGCTGCGCCCATAACCCGTATGGTGATGGTCAGGCATGCTCTCGCATTCTGGAAGCGTTAAAAAATAATCGGATATCACTATGAG < SRR4302547.6600374/94‑1 (MQ=60)
CAAGCTATGAGCTGCGCCCATAACCCGTATGGTGATGGTCAGGCATGCTCTCGCATTCTGGAAGCGTTAAAAAATAATCGGATATCACTATGAG > SRR4302547.3149894/1‑94 (MQ=60)
CAAGCTATGAGCTGCGCCCATAACCCGTATGGTGATGGTCAGGCATGCTCTCGCATTCTGGAAGCGTTAAAAAATAATCGGATATCACTATGAG > SRR4302547.2677376/1‑94 (MQ=60)
CAAGCTATGAGCTGCGCCCATAACCCGTATGGTGATGGTCAGGCATGCTCTCGCATTCTGGAAGCGTTAAAAAATAATCGGATATCACTATGAG < SRR4302547.3636358/94‑1 (MQ=60)
CAAGCTATGAGCTGCGCCCATAACCCGTATGGTGATGGTCAGGCATGCTCTCGCATTCTGGAAGCGTTAAAAAATAATCGGATATCACTATGAG < SRR4302547.3732733/94‑1 (MQ=60)
CAAGCTATGAGCCGCGCCCATAACCCGTATGGTGATGGTCAGGCATGCTCTCGCATTCTGGAAGCGTTAAAAAATAATCGGATATCACTATGAG > SRR4302547.1149065/1‑94 (MQ=60)
AAGCTATGAGCTGCGCCCATAACCCGTATGGTGATGGTCAGGCATGCTCTCGCATTCTGGAAGCGTTAAAAAATAATCGGATATCACTATGAGT > SRR4302547.5285745/1‑94 (MQ=60)
AGCTATGAGCCGCGCCCATAACCCGTATGGTGATGGTCAGGCATGCTCTCGCATTCTGGAAGCGTTAAAAAATAATCGGATATCACTATGAGTT > SRR4302547.4633028/1‑94 (MQ=60)
GCTATGAGCTGCGCCCATAACCCGTATGGTGATGGTCAGGCATGCTCTCGCATTCTGGAAGCGTTAAAAAATAATCGGATATCACTATGAGTTT < SRR4302547.3548043/94‑1 (MQ=60)
GCTATGAGCCGCGCCCATAACCCGTATGGTGATGGTCAGGCATGCTCTCGCATTCTGGAAGCGTTAAAAAATAATCGGATATCACTATGAGTTT < SRR4302547.2579581/94‑1 (MQ=60)
CTATGAGCTGCGCCCATAACCCGTATGGTGATGGTCAGGCATGCTCTCGCATTCTGGAAGCGTTAAAAAATAATCGGATATCACTATGAGTTTT < SRR4302547.6627822/94‑1 (MQ=60)
CTATGAGCCGCGCCCATAACCCGTATGGTGATGGTCAGGCATGCTCTCGCATTCTGGAAGCGTTAAAAAATAATCGGATATCACTATGAGTTTT > SRR4302547.3751458/1‑94 (MQ=60)
CTATGAGCCGCGCCCATAACCCGTATGGCGATGGTCAGGCATGCTCTCGCATTCTGGAAGCGTTAAAAAATAATCGGATATCACTATGAGTTTT > SRR4302547.1965707/1‑94 (MQ=60)
TATGAGCTGCGCCCATAACCCGTATGGTGATGGTCAGGCATGCTCTCGCATTCTGGAAGCGTTAAAAAATAATCGGATATCACTATGAGTTTTG > SRR4302547.4179078/1‑94 (MQ=60)
TATGAGCTGCGCCCATAACCCGTATGGTGATGGTCAGGCATGCTCTCGCATTCTGGAAGCGTTAAAAAATAATCGGATATCACTATGAGTTTTG > SRR4302547.1502453/1‑94 (MQ=60)
TGAGCTGCGCCCATAACCCGTATGGTGATGGTCAGGCATGCTCTCGCATTCTGGAAGCGTTAAAAAATAATCGGATATCACTATGAGTTTTGCG < SRR4302547.2540966/94‑1 (MQ=60)
TGAGCTGCGCCCATAACCCGTATGGTGATGGTCAGGCATGCTCTCGCATTCTGGAAGCGTTAAAAAATAATCGGATATCACTATGAGTTTTGCG < SRR4302547.3687377/94‑1 (MQ=60)
TGAGCTGCGCCCATAACCCGTATGGTGATGGTCAGGCATGCTCTCGCATTCTGGAAGCGTTAAAAAATAATCGGATATCACTATGAGTTTTGCG > SRR4302547.4875131/1‑94 (MQ=60)
TGAGCTGCGCCCATAACCCGTATGGTGATGGTCAGGCATGCTCTCGCATTCTGGAAGCGTTAAAAAATAATCGGATATCACTATGAGTTTTGCG > SRR4302547.2795766/1‑94 (MQ=60)
GAGCTGCGCCCATAACCCGTATGGTGATGGTCAGGCATGCTCTCGCATTCTGGAAGCGTTAAAAAATAATCGGATATCACTATGTGTTTTGCGA < SRR4302547.3313827/94‑1 (MQ=60)
GAGCTGCGCCCATAACCCGTATGGTGATGGTCAGGCATGCTCTCGCATTCTGGAAGCGTTAAAAAATAATCGGATATCACTATGAGTTTTGCGA > SRR4302547.1120550/1‑94 (MQ=60)
GAGCCGCGCCCATAACCCGTATGGTGATGGTCAGGCATGCTCTCGCATTCTGGAAGCGTTAAAAAATAATCGGATATCACTATGAGTTTTGCGA < SRR4302547.3990972/94‑1 (MQ=60)
GCCGCGCCCATAACCCGTATGGTGATGGTCAGGCATGCTCTCGCATTCTGGAAGCGTTAAAAAATAATCGGATATCACTATGAGTTTTGCGACC < SRR4302547.5421203/94‑1 (MQ=60)
CTGCGCCCATAACCCGTATGGTGATGGTCAGGCATGCTCTCGCATTCTGGAAGCGTTAAAAAATAATCGGATATCACTATGAGTTTTGCGACCA > SRR4302547.5187024/1‑94 (MQ=60)
CTGCGCCCATAACCCGTATGGTGATGGTCAGGCATGCTCTCGCATTCTGGAAGCGTTAAAAAATAATCGGATATCACTATGAGTTTTGCGACCA > SRR4302547.5807662/1‑94 (MQ=60)
TGCGCCCATAACCCGTATGGTGATGGTCAGGCATGCTCTCGCATTCTGGAAGCGTTAAAAAATAATCGGATATCACTATGAGTTTTGCGACCAT > SRR4302547.2502640/1‑94 (MQ=60)
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GGTACGGTGCGTCTGGTAGGCACGGATAAGCAGCGAATTGTCGAGGAAGTGACGCGTCTTTTAAAAGACGAAAACGAATATCAAGCTATGAGCCGCGCCCATAACCCGTATGGTGATGGTCAGGCATGCTCTCGCATTCTGGAAGCGTTAAAAAATAATCGGATATCACTATGAGTTTTGCGACCAT > NC_000913/3968702‑3968888
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
