Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
593 |
264.2 |
13311096 |
97.8% |
13018251 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,982,242 |
T→C |
N460S (AAC→AGC) |
aslA ← |
arylsulfatase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,982,242 | 0 | T | C | 87.3%
| 810.3
/ 90.9
| 292 | N460S (AAC→AGC) | aslA | arylsulfatase |
| Reads supporting (aligned to +/- strand): ref base T (19/18); new base C (119/136); total (138/154) |
| Fisher's exact test for biased strand distribution p-value = 6.02e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01 |
Only 100 of 298 total aligned reads displayed.
ACCCTGATATCCGCTCTGGGTATAAGCGTAAGGTTGCTGAATCAGGACGTGATACTTGAACTCATCCATACGCACAGCAGCGAGTTTACCGTTGAGGAAGTAGTGCTCGGCCTTACGGTTAGACTGACCATTTGTTCCCAGGAAGAAGGATGTCTGGTCCACACCATCGATAAAGGTGGTT > NC_000913/3982151‑3982331
|
aCCCTGATATCCGCTCTGGGTATAAGCGTAAGGTTGCTGAATCAGGACGTGATACTTGAACTCATCCATACGCACAGCAGCGAGTTTACCGtt > 1:5270218/1‑93 (MQ=255)
cccTGATATCCGCTCTGGGTATAAGCGTAAGGTTGCTGAATCAGGACGTGATACTTGAACTCATCCATACGCACAGCAGCGAGTTTACCGTTg > 2:889223/1‑93 (MQ=255)
ccTGATATCCGCTCTGGGTATAAGCGTAAGGTTGCTGAATCAGGACGTGATACTTGAACTCATCCATACGCACAGCAGCGAGTTTACCGCTGa < 2:2025965/93‑1 (MQ=255)
ccTGATATCCGCTCTGGGTATAAGCGTAAGGTTGCTGAATCAGGACGTGATACTTGAACTCATCCATACGCACAGCAGCGAGTTTACCGCTGa < 1:5387442/93‑1 (MQ=255)
catGATATCCGCTCTGGGTATAAGCGTAAGGTTGCTGACTCAGGACGTGATACTTGAACTCATCCATACGCACAGCAGCGAGTTTACCGCTGa < 2:5941914/91‑1 (MQ=255)
cTGATATCCGCTCTGGGTATAAGCGTAAGGTTGCTGAATCAGGACGTGATACTTGAACTCATCCATACGCACAGCAGCGAGTTTACCGCTGAg > 1:1430414/1‑93 (MQ=255)
gATATCCGCTCTGGGTATAAGCGTAAGGTTGCTGAATCAGGACGTGATACTTGAACTCATCCATACGCACAGCAGCGAGTTTACCGCTGAGGa > 2:2968607/1‑93 (MQ=255)
atatCCGCTCTGGGTATAAGCGTAAGGTTGCTGAATCAGGACGTGATACTTGAACTCATCCATACGCACAGCAGCGAGTTTACCGCTGAGGaa > 1:1625632/1‑93 (MQ=255)
atatCCGCTCTGGGTATAAGCGTAAGGTTGCTGAATCAGGACGTGATACTTGAACTCATCCATACGCACAGCAGCGAGTTTACCGCTGAGGaa < 2:2455589/93‑1 (MQ=255)
atatCCGCTCTGGGTATAAGCGTAAGGTTGCTGAATCAGGACGTGATACTTGAACTCATCCATACGCACAGCAGCGAGTTTACCGCTGAGGaa < 2:2732409/93‑1 (MQ=255)
tatCCGCTCTGGGTATAAGCGTAAGGTTGCTGAATCAGGACGTGATACTTGAACTCATCCATACGCACAGCAGCGAGTTTACCGCTGAGGAag > 2:5500325/1‑93 (MQ=255)
tatCCGCTCTGGGTATAAGCGTAAGGTTGCTGAATCAGGACGTGATACTTGAACTCATCCATACGCACAGCAGCGAGTTTACCGCTGAGGAag < 2:2106230/93‑1 (MQ=255)
tatCCGCTCTGGGTATAAGCGTAAGGTTGCTGAATCAGGACGTGATACTTGAACTCATCCATACGCACAGCAGCGAGTTTACCGCTGAGGAag > 1:232879/1‑93 (MQ=255)
atCCGCTCTGGGTATAAGCGTAAGGTTGCTGAATCAGGACGTGATACTTGAACTCATCCATACGCACAGCAGCGAGTTTACCGCTGAGGAagt > 1:2496465/1‑93 (MQ=255)
atCCGCTCTGGGTATAAGCGTAAGGTTGCTGAATCAGGACGTGATACTTGAACTCATCCATACGCACAGCAGCGAGTTTACCGCTGAGGAagt < 2:6554864/93‑1 (MQ=255)
atCCGCTCTGGGTATAAGCGTAAGGTTGCTGAATCAGGACGTGATACTTGAACTCATCCATACGCACAGCAGCGAGTTTACCGCTGAGGAagt < 2:260701/93‑1 (MQ=255)
tCCGCTCTGGGTATAAGCGTAAGGTTGCTGAATCAGGACGTGATACTTGAACTCATCCATACGCACAGCAGCGAGTTTACCGCTGAGGAagta > 2:4392979/1‑93 (MQ=255)
ccGCTCTGGGTATAAGCGTAAGGTTGCTGAATCAGGACGTGATACTTGAACTCATCCATACGCACAGCAGCGAGTTTACCGCTGAGGAagtag < 2:808192/93‑1 (MQ=255)
cGCTCTGGGTATAAGCGTAAGGTTGCTGAATCAGGACGTGATACTTGAACTCATCCATACGCACAGCAGCGAGTTTACCGTTGAGGAagtagt > 2:5263102/1‑93 (MQ=255)
cGCTCTGGGTATAAGCGTAAGGTTACTGAATCAGGACGTGATACTTGAACTCATCCATACGCACAGCAGCGAGTTTACCGCTGAGGAagtagt < 1:4206825/93‑1 (MQ=255)
ctctGGGTATAAGCGTAAGGTTGCTGAATCAGGACGTGATACTTGAACTCATCCATACGCACAGCAGCGAGTTTACCGCTGAGGAAGTAGTGc > 2:3347464/1‑93 (MQ=255)
tctGGGTATAAGCGTAATGTTGCTGAATCAGGACGTGATACTTGAACTCATCCATACGCACAGCAGCGAGTTTACCGCTGAGGAAGTAGTGCt > 1:3892522/1‑93 (MQ=255)
tctGGGTATAAGCGTAAGGTTGCTGAATCAGGACGTGATACTTGAACTCATCCATACGCACAGCAGCGAGTTTACCGCTGAGGAAGTAGTGCt < 2:4353562/93‑1 (MQ=255)
ctGGGTATAAGCGTAAGGTTGCTGAATCAGGACGTGATACTTGAACTCATCCATACGCACAGCAGCGAGTTTACCGCTGAGGAAGTAGTGCTc < 1:3107411/93‑1 (MQ=255)
ctGGGTATAAGCGTAAGGTTGCTGAATCAGGACGTGATACTTGAACTCATCCATACGCACAGCAGCGAGTTTACCGCTGAGGAAGTAGTGCTc < 1:5754979/93‑1 (MQ=255)
ctGGGTATAAGCGTAAGGTTGCTGAATCAGGACGTGATACTTGAACTCATCCATACGCACAGCAGCGAGTTTACCGCTGAGGAAGTAGAGCTc > 1:4132034/1‑93 (MQ=255)
tGGGTATAAGCGTAAGGTTGCTGAATCAGGACGTGATACTTGAACTCATCCATACGCACAGCAGCGAGTTTACCGTTGAGGAAGTAGTGCTCg > 1:3607420/1‑93 (MQ=255)
tGGGTATAAGCGTAAGGTTGCTGAATCAGGACGTGATACTTGAACTCATCCATACGCACAGCAGCGAGTTTACCGCTGAGGAAGTAGTGCTCg > 1:4609067/1‑93 (MQ=255)
tGGGTATAAGCGTAAGGTTGCTGAATCAGGACGTGATACTTGAACTCATCCATACGCACAGCAGCGAGTTTACCGCTGAGGAAGTAGTGCTCg > 1:4698671/1‑93 (MQ=255)
tGGGTATAAGCGTAAGGTTGCTGAATCAGGACGTGATACTTGAACTCATCCATACGCACAGCAGCGAGTTTACCGCTGAGGAAGTAGTGCTCg < 1:1507997/93‑1 (MQ=255)
tGGGTATAAGCGTAAGGTTGCTGAATCAGGACGTGATACTTGAACTCATCCATACGCACAGCAGCGAGTTTACCGCTGAGGAAGTAGTGCTCg > 1:4546812/1‑93 (MQ=255)
gggTATAAGCGTAAGGTTGCTGAATCAGGACGTGATACTTGAACTCATCCATACGCACAGCAGCGAGTTTACCGCTGAGGAAGTAGTGCTCgg < 1:3010500/93‑1 (MQ=255)
gTATAAGCGTAAGGTTGCTGAATCAGGACGTGATACTTGAACTCATCCATACGCACAGCAGCGAGTTTACCGTTGAGGAAGTAGTGCTCGGcc < 2:6226557/93‑1 (MQ=255)
tataAGCGTAAGGTTGCTGAATCAGGACGTGATACTTGAACTCATCCATACGCACAGCAGCGAGTTTACCGCTGAGGAAGTAGTGCTCGGCCt < 2:1923063/93‑1 (MQ=255)
tataAGCGTAAGGTTGCTGAATCAGGACGTGATACTTGAACTCATCCATACGCACAGCAGCGAGTTTACCGCTGAGGAAGTAGTGCTCGGCCt > 1:3915116/1‑93 (MQ=255)
tataAGCGTAAGGTTGCTGAATCAGGACGTGATACTTGAACTCATCCATACGCACAGCAGCGAGTTTACCGCTGAGGAAGTAGTGCTCGGCCt > 2:4169088/1‑93 (MQ=255)
taAGCGTAAGTTTGCTAAATCAGGACGTGATACTTGAACTCATCCATACGCACAGCAGCGAGTTTACCGCTGAGGAAGTAGTGCTCGGCCTTa < 1:4792745/93‑1 (MQ=255)
taAGCGTAAGGTTGCTGAATCAGGACGTGATACTTGAACTCATCCATACGCACAGCAGCGAGTTTACCGCTGAGGAAGTAGTGCTCGGCCTTa > 2:1201157/1‑93 (MQ=255)
aaGCGTAAGGTTGCTGAATCAGGACGTGATACTTGAACTCATCCATACGCACAGCAGCGAGTTTACCGCTGAGGAAGTAGTGCTCGGCCTTAc > 1:6258918/1‑93 (MQ=255)
gCGTAAGGTTGCTGAATCAGGACGTGATACTTGAACTCATCCATACGCACAGCAGCGAGTTTACCGCTGAGGAAGTAGTGCTCGGCCTTACgg > 1:1703056/1‑93 (MQ=255)
gTAAGGTTGCTGAATCAGGACGTGATACTTGAACTCATCCATACGCACAGCAGCGAGTTTACCGCTGAGGAAGTAGTGCTCGGCCTTACGGtt < 1:5096983/93‑1 (MQ=255)
tAAGGTTGCTGAATCAGGACGTTATACGTGAACTCATCCATACGCACAGCAGCGAGTTTACCGCTGAGGAAGTAGTGCTCGGCCTTACGGTTa < 2:6290409/93‑1 (MQ=255)
tAAGGTTGCTGAATCAGGACGTGATACTTGAACTCATCCATACGCACAGCAGCGAGTTTACCGCTGAGGAAGTAGTGCTCGGCCTTACGGTTa < 1:4343027/93‑1 (MQ=255)
aGGTTGCTGAATCAGGACGTGATACTTGAACTCATCCATACGCACAGCAGCGAGTTTACCGCTGAGGAAGTAGTGCTCGGCCTTACGGTTAGa > 1:1797449/1‑93 (MQ=255)
ggTTGCTGAATCAGGACGTGATACTTGAACTCATCCATACGCACAGCAGCGAGTTTACCGTTGAGGAAGTAGTGCTCGGCCTTACGGTTAGAc > 2:5167844/1‑93 (MQ=255)
ggTTGCTGAATCAGGACGTGATACTTGAACTCATCCATACGCACAGCAGCGAGTTTACCGCTGAGGAAGTAGTGCTCGGCCTTACGGTTAGAc < 1:2714628/93‑1 (MQ=255)
gTTGCTGAATCAGGACGTGATACTTGAACTCATCCATACGCACAGCAGCGAGTTTACCGCTGAGGAAGTAGTGCTCGGCCTTACGGTTAGACt > 2:5445167/1‑93 (MQ=255)
ttGCTGAATCAGGACGTGATACTTGAACTCATCCATACGCACAGCAGCGAGTTTACCGCTGAGGAAGTAGTGCTCGGCCTTACGGTTAGACTg > 1:3317048/1‑93 (MQ=255)
tGCTGAATCAGGACGTGATACTTGAACTCATCCATACGCACAGCAGCGAGTTTACCGCTGAGGAAGTAGTGCTCGGCCTTACGGTTAGACTGa < 2:69625/93‑1 (MQ=255)
gCTGAATCAGGACGTGATACTTGAACTCATCCATACGCACAGCAGCGAGTTTACCGTTGAGGAAGTAGTGCTCGGCCTTACGGTTAGACTGAc < 2:4805968/93‑1 (MQ=255)
cTGAATCAGGACGTGATACTTGAACTCATCCATACGCACAGCAGCGAGTTTACCGCTGAGGAAGTAGTGCTCGGCCTTACGGTTAGACTGAcc > 2:5226643/1‑93 (MQ=255)
cTGAATCAGGACGTGATACTTGAACTCATCCATACGCACAGCAGCGAGTTTACCGCTGAGGAAGTAGTGCTCGGCCTTACGGTTAGACTGAcc < 1:6483303/93‑1 (MQ=255)
cTGAATCAGGACGTGATACTGGAACTCATCCATACGCACAGCAGCGAGTTTACCGCTGAGGAAGTAGTGCTCGGCCTTACGGTTAGACTGAcc < 1:1157601/93‑1 (MQ=255)
tGAATCAGGACGTGATACTTGAACTCATCCATACGCACAGCAGCGAGTTTACCGTTGAGGAAGTAGTGCTCGGCCTTACGGTTAGACTGACCa < 2:3457935/93‑1 (MQ=255)
gAATCAGGACGTGATACTTGAACTCATCCATACGCACAGCAGCGAGTTTACCGCTGAGGAAGTAGTGCTCGGCCTTACGGTTAGACTGACCAt < 2:1402552/93‑1 (MQ=255)
gAATCAGGACGTGATACTTGAACTCATCCATACGCACAGCAGCGAGTTTACCGCTGAGGAAGTAGTGCTCGGCCTTACGGTTAGACTGACCAt > 2:1107351/1‑93 (MQ=255)
aaTCAGGACGTGATACTTGAACTCATCCATACGCACAGCAGCGAGTTTACCGCTGAGGAAGTAGTGCTCGGCCTTACGGTTAGACTGACCAtt < 1:1889434/93‑1 (MQ=255)
aaTCAGGACGTGATACTTGAACTCATCCATACGCACAGCAGCGAGTTTACCGCTGAGGAAGTAGTGCTCGGCCTTACGGTTAGACTGACCAtt > 1:5925392/1‑93 (MQ=255)
cAGGACGTGATACTTGAACTCATCCATACGCACAGCAGCGAGTTTACCGCTGAGGAAGTAGTGCTCGGCCTTACGGTTAGACTGACCATTTGt < 2:2782154/93‑1 (MQ=255)
aGGACGTGATACTTGAACTCATCCATACGCACAGCAGCGAGTTTACCGCTGAGGAAGTAGTGCTCGGCCTTACGGTTAGACTGACCATTTGtt > 2:39139/1‑93 (MQ=255)
cGTGATACTTGAACTCATCCATACGCACAGCAGCGAGTTTACCGCTGAGGAAGTAGTGCTCGGCCTTACGGTTAGACTGACCATTTGTTCCCa < 1:71904/93‑1 (MQ=255)
tGATACTTGAACTCATCCATACGCACAGCAGCGAGTTTACCGCTGAGGAAGTAGTGCTCGGCCTTACGGTTAGACTGACCATTTGTTCCCAgg < 1:4833240/93‑1 (MQ=255)
tGATACTTGAACTCATCCATACGCACAGCAGCGAGTTTACCGCTGAGGAAGTAGTGCTCGGCCTTACGGTTAGACTGACCATTTGTTCCCAgg > 1:2086379/1‑93 (MQ=255)
gATACTTGAACTCATCCATACGCACAGCAGCGAGTTTACCGCTGAGGAAGTAGTGCTCGGCCTTACGGTTAGACTGACCATTTGTTCCCAGga > 2:5638540/1‑93 (MQ=255)
aTACTTGAACTCATCCATACGCACAGCAGCGAGTTTACCGCTGAGGAAGTAGTGCTCGGCCTTACGGTTAGACTGACCATTTGTTCCCAGgaa < 2:3622937/93‑1 (MQ=255)
tACTTGACCTCATCCATACGCACAGCAGCGAGTTTACCGCTGAGGAAGTAGTGCTCGGCCTTACGGTTAGACTGACCATTTGTTCCCAGgaag > 2:1885462/1‑93 (MQ=255)
tACTTGAACTCATCCATACGCACAGCAGCGAGTTTACCGCTGAGGAAGTAGTGCTCGGCCTTACGGTTAGACTGACCATTTGTTCCCAGgaag > 2:1648497/1‑93 (MQ=255)
tACTTGAACTCATCCATACGCACAGCAGCGAGTTTACCGCTGAGGAAGTAGTGCTCGGCCTTACGGTTAGACTGACCATTTGTTCCCAGgaag < 1:68672/93‑1 (MQ=255)
cTTGACCTCATCCATACGCACAGCAGCGAGTTTACCGCTGAGGAAGTAGTGCTCGGCCTTACGGTTAGACTGACCATTTGTTCCCAGgaagaa < 1:805171/93‑1 (MQ=255)
cTTGAACTCATCCATACGCACAGCAGCGAGTTTACCGCTGAGGAAGTAGTGCTCGGCCTTACGGTTAGACTGACCATTTGTTCCCAGgaagaa > 2:5820919/1‑93 (MQ=255)
cTTGAACTCATCCATACGCACAGCAGCGAGTTTACCGCTGAGGAAGTAGTGCTCGGCCTTACGGTTAGACTGACCATTTGTTCCCAGgaagaa < 1:3822671/93‑1 (MQ=255)
ttGAACTCATCCATACGCACAGCAGCGAGTTTACCGTTGAGGAAGTAGTGCTCGGCCTTACGGTTAGACTGACCATTTGTTCCCAGGaagaag > 1:2743699/1‑93 (MQ=255)
ttGAACTCATCCATACGCACAGCAGCGAGTTTACCGCTGAGGAAGTAGTGCTCGGCCTTACGGTTAGACTGACCATTTGTTCCCAGGaagaag > 1:1017015/1‑93 (MQ=255)
tGAACTCATCCATACGCACAGCAGCGAGTTTACCGCTGAGGAAGTAGTGCTCGGCCTTACGGTTAGACTGACCATTTGTTCCCAGGAAGAAgg < 2:2671239/93‑1 (MQ=255)
gAACTCATCCATACGCACAGCAGCGAGTTTACCGTTGAGGAAGTAGTGCTCGGCCTTACGGTTAGACTGACCATTTGTTCCCAGGAAGAAGGa < 1:4045407/93‑1 (MQ=255)
aaCTCATCCATACGCACAGCAGCGAGTTTACCGCTGAGGAAGTAGTGCTCGGCCTTACGGTTAGACTGACCATTTGTTCCCAGGAAGAAGGAt < 1:1564321/93‑1 (MQ=255)
tCATCCATACGCACAGCAGCGAGTTTACCGCTGAGGAAGTAGTGCTCGGCCTTACGGTTAGACTGACCATTTGTTCCCAGGAAGAAGGATGTc < 2:1819644/93‑1 (MQ=255)
tCATCCATACGCACAGCAGCGAGTTTACCGCTGAGGAAGTAGTGCTCGGCCTTACGGTTAGACTGACCATTTGTTCCCAGGAAGAAGGATGTc > 1:1077766/1‑93 (MQ=255)
tCATCCATACGCACAGCAGCGAGTTTACCGCTGAGGAAGTAGTGCTCGGCCTTACGGTTAGACTGACCATTTGTTCCCAGGAAGAAGGATGTc > 1:5044761/1‑93 (MQ=255)
cATCCATACGCACAGCAGCGAGTTTACCGCTGAGGAAGTAGTGCTCGGCCTTACGGTTAGACTGACCATTTGTTCCCAGGAAGAAGGATGTCt < 2:2183371/93‑1 (MQ=255)
tCCATACGCACAGCAGCGAGTTTACCGCTGAGGAAGTAGTGCTCGGCCTTACGGTTAGACTGACCATTTGTTCCCAGGAAGAAGGATGTCTgg > 2:4559615/1‑93 (MQ=255)
tCCATACGCACAGCAGCGAGTTTACCGCTGAGGAAGTAGTGCTCGGCCTTACGGTTAGACTGACCATTTGTTCCCAGGAAGAAGGATGTCTgg < 1:3695714/93‑1 (MQ=255)
tCCATACGCACAGCAGCGAGTTTACCGCTGAGGAAGTAGTGCTCGGCCTTACGGTTAGACTGACCATTTGTTCCCAGGAAGAAGGATGTCTgg > 2:6388173/1‑93 (MQ=255)
cATACGCACAGCAGCGAGTTTACCGCTGAGGAAGTAGTGCTCGGCCTTACGGTTAGACTGACCATTTGTTCCCAGGAAGAAGGATGTCTGGTc > 1:2437852/1‑93 (MQ=255)
aTACGCACAGCAGCGAGTTTACCGCTGAGGAAGTAGTGCTCGGCCTTACGGTTAGACTGACCATTTGTTCCCAGGAAGAAGGATGTCTGGTcc > 2:3226897/1‑93 (MQ=255)
tACGCACAGCAGCGAGTTTACCGCTGAGGAAGTAGTGCTCGGCCTTACGGTTAGACTGACCATTTGTTCCCAGGAAGAAGGATGTCTGGTCca > 2:6005591/1‑93 (MQ=255)
cGCACAGCAGCGAGTTTACCGCTGAGGAAGTAGTGCTCGGCCTTACGGTTAGACTGACCATTTGTTCCCAGGAAGAAGGATGTCTGGTCcaca > 2:1847632/1‑93 (MQ=255)
acaGCAGCGAGTTTACCGCTGAGGAAGTAGTGCTCGGCCTTACGGTTAGACTGACCATTTGTTCCCAGGAAGAAGGATGTCTGGTCCACACCa > 1:550845/1‑93 (MQ=255)
cagcGAGTTTACCGTTGAGGAAGTAGTGCTCGGCCTTACGGTTAGACTGACCATTTGTTCCCAGGAAGAAGGATGTCTGGTCCACACCATCGa < 2:4007386/93‑1 (MQ=255)
agcGAGTTTACCGCTGAGGAAGTAGTGCTCGGCCTTACGGTTAGACTGACCATTTGTTCCCAGGAAGAAGGATGTCTGGTCCACACCATCGAt < 1:2952507/93‑1 (MQ=255)
gcGAGTTTACCGCTGAGGAAGTAGTGCTCGGCCTTACGGTTAGACTGACCATTTGTTCCCAGGAAGAAGGATGTCTGGTCCACACCATCGATa > 1:6171949/1‑93 (MQ=255)
gAGTTTACCGCTGAGGAAGTAGTGCTCGGCCTTACGGTTAGACTGACCATTTGTTCCCAGGAAGAAGGATGTCTGGTCCACACCATCGATaaa > 1:3456384/1‑93 (MQ=255)
aGTTTACCGCTGAGGAAGTAGTGCTCGGCCTTACGGTTAGACTGACCATTTGTTCCCAGGAAGAAGGATGTCTGGTCCACACCATCGATAAAg < 1:5657274/93‑1 (MQ=255)
gTTTACCGCTGAGGAAGTAGTGCTCGGCCTTACGGTTAGACTGACCATTTGTTCCCAGGAAGAAGGATGTCTGGTCCACACCATCGATAAAgg < 2:4609614/93‑1 (MQ=255)
gTTTACCGCTGAGGAAGTAGTGCTCGGCCTTACGGTTAGACTGACCATTTGTTCCCAGGAAGAAGGATGTCTGGTCCACACCATCGATAAAgg > 2:3137583/1‑93 (MQ=255)
tttACCGCTGAGGAAGTAGTGCTCGGCCTTACGGTTAGACTGACCATTTGTTCCCAGGAAGAAGGATGTCTGGTCCACACCATCGATAAAggt < 2:3804300/93‑1 (MQ=255)
tACCGCTGAGGCAGTAGTGCTCGGCCTTACGGTTAGACTGACCATTTGTTCCCAGGAAGAAGGATGTGTGGTCCACACCATCGATATAggtgg > 1:3629046/1‑93 (MQ=255)
aCCGCTGAGGAAGTAGTGCTCGGCCTTACGGTTAGACTGACCATTTGTTCCCAGGAAGAAGGATGTCTGGTCCACACCATCGATAAAggtggt < 1:602832/93‑1 (MQ=255)
aCCGCTGAGGAAGTAGTGCTCGGCCTTACGGTTAGACTGACCATTTGTTCCCAGGAAGAAGGATGTCTGGTCCACACCATCGATAAAggtggt < 1:4985763/93‑1 (MQ=255)
ccGCTGAGGAAGTAGTGCTCGGCCTTACGGTTAGACTGACCATTTGTTCCCAGGAAGAAGGATGTCTGGTCCACACCATCGATAAAGGTGGtt < 2:5679943/93‑1 (MQ=255)
|
ACCCTGATATCCGCTCTGGGTATAAGCGTAAGGTTGCTGAATCAGGACGTGATACTTGAACTCATCCATACGCACAGCAGCGAGTTTACCGTTGAGGAAGTAGTGCTCGGCCTTACGGTTAGACTGACCATTTGTTCCCAGGAAGAAGGATGTCTGGTCCACACCATCGATAAAGGTGGTT > NC_000913/3982151‑3982331
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
CCACCCTGATATCCGCTCTGGGTATAAGCGTAAGGTTGCTGAATCAGGACGTGATACTTGAACTCATCCATACGCACAGCAGCGAGTTTACCGTTGAGGAAGTAGTGCTCGGCCTTACGGTTAGACTGACCATTTGTTCCCAGGAAGAAGGATGTCTGGTCCACACCATCGATAAAGGTGGTTTTCG > NC_000913/3982149‑3982335
|
CCACCCTGATATCCGCTCTGGGTATAAGCGTAAGGTTGCTGAATCAGGACGTGATACTTGAACTCATCCATACGCACAGCAGCGAGTTTACCGC > SRR4302547.376972/1‑94 (MQ=60)
CCACCCTGATATCCGCTCTGGGTATAAGCGTAAGGTTGCTGAATCAGGACGTGATACTTGAACTCATCCATACGCACAGCAGCGAGTTTACCGC < SRR4302547.4405548/94‑1 (MQ=60)
CCACCCTGATATCCGCTCTGGGTATAAGCGTAAGGTTGCTGAATCAGGACGTGATACTTGAACTCATCCATACGCACAGCAGCGAGTTTACCGC < SRR4302547.6605604/94‑1 (MQ=60)
CACCCTGATATCCGCTCTGGGTATAAGCGTAAGGTTGCTGAATCAGGACGTGATACTTGAACTCATCCATACGCACAGCAGCGAGTTTACCGTT > SRR4302547.5378813/1‑94 (MQ=60)
CACCCTGATATCCGCTCTGGGTATAAGCGTAAGGTTGCTGAATCAGGACGTGATACTTGAACTCATCCATACGCACAGCAGCGAGTTTACCGCT > SRR4302547.5063443/1‑94 (MQ=60)
CACCCTGATATCCGCTCTGGGTATAAGCGTAAGGTTGCTGAATCAGGACGTGATACTTGAACTCATCCATACGCACAGCAGCGAGTTTACCGCT < SRR4302547.4378907/94‑1 (MQ=60)
ACCCTGATATCCGCTCTGGGTATAAGCGTAAGGTTGCTGAATCAGGACGTGATACTTGAACTCATCCATACGCACAGCAGCGAGTTTTCCGCTG < SRR4302547.6777657/94‑1 (MQ=60)
ACCCTGATATCCGCTCTGGGTATAAGCGTAAGGTTGCTGAATCAGGACGTGATACTTGAACTCATCCATACGCACAGCAGCGAGTTTACCGCTG < SRR4302547.6706139/94‑1 (MQ=60)
ACCCTGATATCCGCTCTGGGTATAAGCGTAAGGTTGCTGAATCAGGACGTGATACTTGAACTCATCCATACGCACAGCAGCGAGTTTACCGCTG < SRR4302547.1907081/94‑1 (MQ=60)
ACCCTGATATCCGCTCTGGGTATAAGCGTAAGGTTGCTGAATCAGGACGTGATACTTGAACTCATCCATACGCACAGCAGCGAGTTTACCGCTG < SRR4302547.4684252/94‑1 (MQ=60)
CCTGATATCCGCTCTGTGTATAAGCGTAAGGTTGCTGAATCAGGACGTGATACTTGAACTCATCCATACGCACAGCAGCGAGTTTACCGCTGAG < SRR4302547.369477/94‑1 (MQ=60)
CCTGATATCCGCTCTGGGTATAAGCGTAAGGTTGCTGAATCAGGACGTGATACTTGAACTCATCCATACGCACAGCAGCGAGTTTACCGTTGAG > SRR4302547.6746580/1‑94 (MQ=60)
CCTGATATCCGCTCTGGGTATAAGCGTAAGGTTGCTGAATCAGGACGTGATACTTGAACTCATCCATACGCACAGCAGCGAGTTTACCGCTGAG > SRR4302547.1459020/1‑94 (MQ=60)
CCTGATATCCGCTCTGGGTATAAGCGTAAGGTTGCTGAATCAGGACGTGATACTTGAACTCATCCATACGCACAGCAGCGAGTTTACCGCTGAG < SRR4302547.3297087/94‑1 (MQ=60)
CCTGATATCCGCTCTGGGTATAAGCGTAAGGTTGCTGAATCAGGACGTGATACTTGAACTCATCCATACGCACAGCAGCGAGTTTACCGCTGAG < SRR4302547.5498698/94‑1 (MQ=60)
CTGATATCCGCTCTGGGTATAAGCGTAAGGTTGCTGAATCAGGACGTGATACTTGAACTCATCCATACGCACAGCAGCGAGTTTACCGCTGAGG < SRR4302547.2974244/94‑1 (MQ=60)
CTGATATCCGCTCTGGGTATAAGCCTTTGGTTGCTGAATCAGGACGTGATACTTGAACTCATCCATAGGCACAGCAACGAGTTTACCGCTGATG > SRR4302547.3105883/1‑94 (MQ=60)
GATATCCGCTCTGGGTATAAGCGTAAGGTTGCTGAATCAGGACGTGATACTTGAACTCATCCATACGCACAGCAGCGAGTTTACCGCTGAGGAA > SRR4302547.1657799/1‑94 (MQ=60)
ATATCCGCTCTGGGTATAAGCGTAAGGTTGCTGAATCAGGACGTGATACTTGAACTCATCCATACGCACAGCAGCGAGTTTACCGCTGAGGAAG > SRR4302547.237257/1‑94 (MQ=60)
ATATCCGCTCTGGGTATAAGCGTAAGGTTGCTGAATCAGGACGTGATACTTGAACTCATCCATACGCACAGCAGCGAGTTTACCGCTGAGGAAG < SRR4302547.2506180/94‑1 (MQ=60)
TATCCGCTCTGGGTATAAGCGTAAGGTTGCTGAATCAGGACGTGATACTTGAACTCATCCATACGCACAGCAGCGAGTTTACCGCTGAGGAAGT > SRR4302547.2546903/1‑94 (MQ=60)
ATCCGCTCTGGGTATAAGCGTAAGGTTGCTGAATCAGGACGTGATACTTGAACTCATCCATACGCACAGCAGCGAGTTTACCGCTGAGGAAGTA > SRR4302547.1116709/1‑94 (MQ=60)
TCCGCTCTGGTTATAAGCGTAAGGTTGCTGAATCAGGACGTGATACTTGAACTCATCCATACGCACAGCAGCGAGTTTACCGCTGAGGAAGTAG < SRR4302547.1467557/94‑1 (MQ=60)
TCCGCTCTGGGTATAAGCGTAAGGTTGCTGAATCAGGACGTGATACTTGAACTCATCCATACGCACAGCAGCGAGTTTACCGCTGAGGAAGTAG < SRR4302547.6242918/94‑1 (MQ=60)
CCGCTCTGGGTATAAGCGTAAGGTTGCTGAATCAGGACGTGATACTTGAACTCATCCATACGCACAGCAGCGAGTTTACCGCTGAGGAAGTAGT < SRR4302547.4048701/94‑1 (MQ=60)
CGCTCTGGGTATAAGCGTAAGGTTACTGAATCAGGACGTGATACTTGAACTCATCCATACGCACAGCAGCGAGTTTACCGCTGAGGAAGTAGTG < SRR4302547.4292670/94‑1 (MQ=60)
GCTCTGGGTATAAGCGTAAGGTTGCTGAATCAGGACGTGATACTTGAACTCATCCATACGCACAGCAGCGAGTTTACCGCTGAGGAAGTAGTGC < SRR4302547.3781940/94‑1 (MQ=60)
CTCTGGGTATAAGCGTAATGTTGCTGAATCAGGACGTGATACTTGAACTCATCCATACGCACAGCAGCGAGTTTACCGCTGAGGAAGTAGTGCT > SRR4302547.3971688/1‑94 (MQ=60)
CTCTGGGTATAAGCGTAAGGTTGCTGAATCAGGACGTGATACTTGAACTCATCCATACGCACAGCAGCGAGTTTACCGCTGAGGAAGTAGTGCT < SRR4302547.3874825/94‑1 (MQ=60)
CTCTGGGTATAAGCGTAAGGTTGCTGAATCAGGACGTGATACTTGAACTCATCCATACGCACAGCAGCGAGTTTACCGCTGAGGAAGTAGTGCT > SRR4302547.5933373/1‑94 (MQ=60)
TCTGGGTATAAGCGTAAGGTTGCTGAATCAGGACGTGATACTTGAACTCATCCATACGCACAGCAGCGAGTTTACCGCTGAGGAAGTAGAGCTC > SRR4302547.4216103/1‑94 (MQ=60)
CTGGGTATAAGCGTAAGGTTGCTGAATCAGGACGTGATACTTGAACTCATCCATACGCACAGCAGCGAGTTTACCGTTGAGGAAGTAGTGCTCG > SRR4302547.3680985/1‑94 (MQ=60)
CTGGGTATAAGCGTAAGGTTGCTGAATCAGGACGTGATACTTGAACTCATCCATACGCACAGCAGCGAGTTTACCGCTGAGGAAGTAGTGCTCG < SRR4302547.3168994/94‑1 (MQ=60)
CTGGGTATAAGCGTAAGGTTGCTGAATCAGGACGTGATACTTGAACTCATCCATACGCACAGCAGCGAGTTTACCGCTGAGGAAGTAGTGCTCG < SRR4302547.5873961/94‑1 (MQ=60)
CTGGGTATAAGCGTAAGGTTGCTGAATCAGGACGTGATACTTGAACTCATCCATACGCACAGCAGCGAGTTTACCGCTGAGGAAGTAGTGCTCG > SRR4302547.4704460/1‑94 (MQ=60)
CTGGGTATAAGCGTAAGGTTGCTGAATCAGGACGTGATACTTGAACTCATCCATACGCACAGCAGCGAGTTTACCGCTGAGGAAGTAGTGCTCG > SRR4302547.4640836/1‑94 (MQ=60)
CTGGGTATAAGCGTAAGGTTGCTGAATCAGGACGTGATACTTGAACTCATCCATACGCACAGCAGCGAGTTTACCGCTGAGGAAGTAGTGCTCG > SRR4302547.4795988/1‑94 (MQ=60)
TGGGTATAAGCGTAAGGTTGCTGAATCAGGACGTGATACTTGAACTCATCCATACGCACAGCAGCGAGTTTACCGCTGAGGAAGTAGTGCTCGG < SRR4302547.1538053/94‑1 (MQ=60)
TGGGTATAAGCGTAAGGTTGCTGAATCAGGACGTGATACTTGAACTCATCCATACGCACAGCAGCGAGTTTACCGCTGAGGAAGTAGTGCTCGG > SRR4302547.1700895/1‑94 (MQ=60)
GGGTATAAGCGTAAGGTTGCTGAATCAGGACGTGATACTTGAACTCATCCATACGCACAGCAGCGAGTTTACCGCTGAGGAAGTAGTGCTCGGC < SRR4302547.3070362/94‑1 (MQ=60)
GGGTATAAGCGTAAGGTTGCTGAATCAGGACGTGATACTTGAACTCATCCATACGCACAGCAGCGAGTTTACCGCTGAGGAAGTAGTGCTCGGC > SRR4302547.4392509/1‑94 (MQ=60)
GGTATAAGCGTAAGGTTGCTGAATCAGGACGTGATACTTGAACTCATCCATACGCACAGCAGCGAGTTTACCGCTGAGGAAGTAGTGCTCGGCC < SRR4302547.3984431/94‑1 (MQ=60)
GTATAAGCGTAAGGTTGCTGAATCAGGACGTGATACTTGAACTCATCCATACGCACAGCAGCGAGTTTACCGCTGAGGAAGTAGTGCTCGGCCT < SRR4302547.4565477/94‑1 (MQ=60)
GTATAAGCGTAAGGTTGCTGAATCAGGACGTGATACTTGAACTCATCCATACGCACAGCAGCGAGTTTACCGCTGAGGAAGTAGTGCTCGGCCT > SRR4302547.3994724/1‑94 (MQ=60)
TATAAGCGTAAGGTTGCTGAATCAGGACGTGATACTTGAACTCATCCATACGCACAGCAGCGAGTTTACCGCTGAGGAAGTAGTGCTCGGCCTT < SRR4302547.145530/94‑1 (MQ=60)
TATAAGCGTAAGGTTGCTGAATCAGGACGTGATACTTGAACTCATCCATACGCACAGCAGCGAGTTTACCGCTGAGGAAGTAGTGCTCGGCCTT > SRR4302547.303819/1‑94 (MQ=60)
ATAAGCGTAAGGTTGCTGAATCAGGACGTGATACTTGAACTCATCCATACGCACAGCAGCGAGTTTACCGTTGAGGAAGTAGTGCTCGGCCTTA < SRR4302547.2607889/94‑1 (MQ=60)
ATAAGCGTAAGGTTGCTGAATCAGGACGTGATACTTGAACTCATCCATACGCACAGCAGCGAGTTTACCGCTGAGGAAGTAGTGCTCGGCCTTA > SRR4302547.2793031/1‑94 (MQ=60)
ATAAGCGTAAGGTTGCTGAATCAGGACGTGATACTTGAACTCATCCATACGCACAGCAGCGAGTTTACCGCTGAGGAAGTAGTGCTCGGCCTTA > SRR4302547.144253/1‑94 (MQ=60)
ATAAGCGTAAGGTTGCTGAATCAGGACGTGATACTTGAACTCATCCATACGCACAGCAGCGAGTTTACCGCTGAGGAAGTAGTGCTCGGCCTTA < SRR4302547.3090637/94‑1 (MQ=60)
TAAGCGTAAGTTTGCTAAATCAGGACGTGATACTTGAACTCATCCATACGCACAGCAGCGAGTTTACCGCTGAGGAAGTAGTGCTCGGCCTTAC < SRR4302547.4892058/94‑1 (MQ=60)
TAAGCGTAAGGTTGCTGAATCAGGACGTGATACTTGAACTCATCCATACGCACAGCAGCGAGTTTACCGCTGAGGAAGTAGTGCTCGGCCTTAC < SRR4302547.5856953/94‑1 (MQ=60)
TAAGCGTAAGGTTGCTGAATCAGGACGTGATACTTGAACTCATCCATACGCACAGCAGCGAGTTTACCGCTGAGGAAGTAGTGCTCGGCCTTAC > SRR4302547.2392574/1‑94 (MQ=60)
TAAGCGTAAGGTTGCTGAATCAGGACGTGATACTTGAACTCATCCATACGCACAGCAGCGAGTTTACCGCTGAGGAAGTAGTGCTCGGCCTTAC < SRR4302547.6258225/94‑1 (MQ=60)
TAAGCGTAAGGTTGCTGAATCAGGACGTGATACTTGAACTCATCCATACGCACAGCAGCGAGTTTACCGCTGAGGAAGTAGTGCTCGGCCTTAC > SRR4302547.6388948/1‑94 (MQ=60)
AAGCGTAAGGTTGCTGAATCAGGACGTGATACTTGAACTCATCCATACGCACAGCAGCGAGTTTACCGCTGAGTAAGTAGTGCTAGGCCTTACG < SRR4302547.6632797/94‑1 (MQ=60)
AAGCGTAAGGTTGCTGAATCAGGACGTGATACTTGAACTCATCCATACGCACAGCAGCGAGTTTACCGCTGAGGAAGTAGTGCTCGGCCTTACG < SRR4302547.5198024/94‑1 (MQ=60)
AGCGTAAGGTTGCTGAATCAGGACGTGATACTTGAACTCATCCATACGCACAGCAGCGAGTTTACCGCTGAGGAAGTAGTGCTCGGCCTTACGG > SRR4302547.1736561/1‑94 (MQ=60)
CGTAAGGTTGCTGAATCAGGACGTGATACTTGAACTCATCCATACGCACAGCAGCGAGTTTACCGCTGAGGAAGTAGTGCTCGGCCTTACGGTT < SRR4302547.3908972/94‑1 (MQ=60)
CGTAAGGTTGCTGAATCAGGACGTGATACTTGAACTCATCCATACGCACAGCAGCGAGTTTACCGCTGAGGAAGTAGTGCTCGGCCTTACGGTT > SRR4302547.2953948/1‑94 (MQ=60)
CGTAAGGTTGCTGAATCAGGACGTGATACTTGAACTCATCCATACGCACAGCAGCGAGTTTACCGCTGAGGAAGTAGTGCTCGGCCTTACGGTT < SRR4302547.4191257/94‑1 (MQ=60)
GTAAGGTTGCTGAATCAGGACGTGATACTTGAACTCATCCATACGCACAGCAGCGAGTTTACCGCTGAGGAAGTAGTGCTCGGCCTTACGGTTA < SRR4302547.761621/94‑1 (MQ=60)
GTAAGGTTGCTGAATCAGGACGTGATACTTGAACTCATCCATACGCACAGCAGCGAGTTTACCGCTGAGGAAGTAGTGCTCGGCCTTACGGTTA > SRR4302547.5824725/1‑94 (MQ=60)
GTAAGGTTGCTGAATCAGGACGTGATACTTGAACTCATCCATACGCACAGCAGCGAGTTTACCGCTGAGGAAGTAGTGCTCGGCCTTACGGTTA < SRR4302547.5202075/94‑1 (MQ=60)
GTAAGATTGCTGAATCAGGACGTGATACTTGAACTCATCCATACGCACAGCAGCGAGTTTACCGCTGAGGAAGTAGTGCTCGGCCTTACGGTTA < SRR4302547.6465649/94‑1 (MQ=60)
TAAGGTTGCTGAATCAGGACGTGATACTTGAACTCATCCATACGCACAGCAGCGAGTTTACCGCTGAGGAAGTAGTGCTCGGCCTTACGGTTAG > SRR4302547.5392194/1‑94 (MQ=60)
TAAGGTTGCTGAATCAGGACGTGATACTTGAACTCATCCATACGCACAGCAGCGAGTTTACCGCTGAGGAAGTAGTGCTCGGCCTTACGGTTAG < SRR4302547.3931561/94‑1 (MQ=60)
TAAGGTTGCTGAATCAGGACGTGATACTTGAACTCATCCATACGCACAGCAGCGAGTTTACCGCTGAGGAAGTAGTGCTCGGCCTTACGGTTAG < SRR4302547.4432318/94‑1 (MQ=60)
AAGGTTGCTGAATCAGGACGTGATACTTGAACTCATCCATACGCACAGCAGCGAGTTTACCGCTGAGGAAGTAGTGCTCGGCCTTACGGTTAGA > SRR4302547.3687985/1‑94 (MQ=60)
AAGGTTGCTGAATCAGGACGTGATACTTGAACTCATCCATACGCACAGCAGCGAGTTTACCGCTGAGGAAGTAGTGCTCGGCCTTACGGTTAGA > SRR4302547.1833004/1‑94 (MQ=60)
AGGTTGCTGAATCAGGACGTGATACTTGAACTCATCCATACGCACAGCAGCGAGTTTACCGTTGAGGAAGTAGTGCTCGGCCTTACGGTTAGAC > SRR4302547.1472469/1‑94 (MQ=60)
GGTTGCTGAATCAGGACGTGATACTTGAACTCATCCATACGCACAGCAGCGAGTTTACCGCTGAGGAAGTAGTGCTCGGCCTTACGGTTAGACT < SRR4302547.2769122/94‑1 (MQ=60)
GGTTGCTGAATCAGGACGTGATACTTGAACTCATCCATACGCACAGCAGCGAGTTTACCGCTGAGGAAGTAGTGCTCGGCCTTACGGTTAGACT < SRR4302547.5178724/94‑1 (MQ=60)
GTTGCTGAATCAGGACGTGATACTTGAACTCATCCATACGCACAGCAGCGAGTTTACCGCTGAGGAAGTAGTGCTCGGCCTTACGGTTAGACTG < SRR4302547.6369438/94‑1 (MQ=60)
GTTGCTGAATCAGGACGTGATACTTGAACTCATCCATACGCACAGCAGCGAGTTTACCGCTGAGGAAGTAGTGCTCGGCCTTACGGTTAGACTG < SRR4302547.3117243/94‑1 (MQ=60)
GTTGCTGAATCAGGACGTGATACTTGAACTCATCCATACGCACAGCAGCGAGTTTACCGCTGAGGAAGTAGTGCTCGGCCTTACGGTTAGACTG > SRR4302547.3383980/1‑94 (MQ=60)
CTGAATCAGGACGTGATACTTGAACTCATCCATACGCACAGCAGCGAGTTTACCGCTGAGGAAGTAGTGCTCGGCCTTACGGTTAGACTGACCA < SRR4302547.6618277/94‑1 (MQ=60)
CTGAATCAGGACGTGATACTGGAACTCATCCATACGCACAGCAGCGAGTTTACCGCTGAGGAAGTAGTGCTCGGCCTTACGGTTAGACTGACCA < SRR4302547.1181020/94‑1 (MQ=60)
TGAATCAGGACGTGATACTTGAACTCATCCATACGCACAGCAGCGAGTTTACCGCTGAGGAAGTAGTGCTCGGCCTTACGGTTAGACTGACCAT > SRR4302547.5313705/1‑94 (MQ=60)
TGAATCAGGACGTGATACTTGAACTCATCCATACGCACAGCAGCGAGTTTACCGCTGAGGAAGTAGTGCTCGGCCTTACGGTTAGACTGACCAT > SRR4302547.2052188/1‑94 (MQ=60)
GAATCAGGACGTGATACTTGAACTCATCCATACGCACAGCAGCGAGTTTACCGCTGAGGAAGTAGTGCTCGGCCTTACGGTTAGACTGACCATT > SRR4302547.6048229/1‑94 (MQ=60)
GAATCAGGACGTGATACTTGAACTCATCCATACGCACAGCAGCGAGTTTACCGCTGAGGAAGTAGTGCTCGGCCTTACGGTTAGACTGACCATT > SRR4302547.1730569/1‑94 (MQ=60)
AATCAGGACGTGATACTTGAACTCATCCATACGCACAGCAGCGAGTTTACCGCTGAGGAAGTAGTGCTCGGCCTTACGGTTAGACTGACCATTT > SRR4302547.5025486/1‑94 (MQ=60)
AATCAGGACGTGATACTTGAACTCATCCATACGCACAGCAGCGAGTTTACCGCTGAGGAAGTAGTGCTCGGCCTTACGGTTAGACTGACCATTT < SRR4302547.1926775/94‑1 (MQ=60)
ATCAGGACGTGATACTTGAACTCATCCATACGCACAGCAGCGAGTTTACCGCTGAGGAAGTAGTGCTCGGCCTTACGGTTAGACTGACCATTTG < SRR4302547.3742342/94‑1 (MQ=60)
ATCAGGACGTGATACTTGAACTCATCCATACGCACAGCAGCGAGTTTACCGCTGAGGAAGTAGTGCTCGGCCTTACGGTTAGACTGACCATTTG < SRR4302547.3051545/94‑1 (MQ=60)
TCAGGACGTGATACTTGAACTCATCCATACGCACAGCAGCGAGTTTACCGCTGAGGAAGTAGTGCTCGGCCTTACGGTTAGACTGACCATTTGT < SRR4302547.5096154/94‑1 (MQ=60)
CAGGACGTGATACTTGAACTCATCCATACGCACAGCAGCGAGTTTACCGCTGAGGAAGTAGTGCTCGGCCTTACGGTTAGACTGACCATTTGTT > SRR4302547.5626476/1‑94 (MQ=60)
AGGACGTGATACTTGAACTCATCCATACGCACAGCAGCGAGTTTACCGCTGAGGAAGTAGTGCTCGGCCTTACGGTTAGACTGACCATTTGTTC > SRR4302547.4666103/1‑94 (MQ=60)
GACGTGATACTTGAACTCATCCATACGCACAGCAGCGAGTTTACCGCTGAGGAAGTAGTGCTCGGCCTTACGGTTAGACTGACCATTTGTTCCC < SRR4302547.4993774/94‑1 (MQ=60)
GACGTGATACTTGAACTCATCCATACGCACAGCAGCGAGTTTACCGCTGAGGAAGTAGTGCTCGGCCTTACGGTTAGACTGACCATTTGTTCCC > SRR4302547.5140031/1‑94 (MQ=60)
ACGTGATACTTGAACTCATCCATACGCACAGCAGCGAGTTTACCGCTGAGGAAGTAGTGCTCGGCCTTACGGTTAGACTGACCATTTGTTCCCA < SRR4302547.1557197/94‑1 (MQ=60)
CGTGATACTTGAACTCATCCATACGCACAGCAGCGAGTTTACCGCTGAGGAAGTAGTGCTCGGCCTTACGGTTAGACTGACCATTTGTTCCCAG < SRR4302547.73253/94‑1 (MQ=60)
CGTGATACTTGAACTCATCCATACGCACAGCAGCGAGTTTACCGCTGAGGAAGTAGTGCTCGGCCTTACGGTTAGACTGACCATTTGTTCCCAG > SRR4302547.2342321/1‑94 (MQ=60)
GTGATACTTGAACTCATCCATACGCACAGCAGCGAGTTTGCCGCTGAGGAAGTAGTGCTCGGCCTTACGGTTAGACTGACCATTTGTTCCCAGG < SRR4302547.556616/94‑1 (MQ=60)
GTGATACTTGAACTCATCCATACGCACAGCAGCGAGTTTACCGCTGAGGAAGTAGTGCTCGGCCTTACGGTTAGACTGACCATTTGTTCCCAGG > SRR4302547.3643487/1‑94 (MQ=60)
GTGATACTTGAACTCATCCATACGCACAGCAGCGAGTTTACCGCTGAGGAAGTAGTGCTCGGCCTTACGGTTAGACTGACCATTTGTTCCCAGG > SRR4302547.2127989/1‑94 (MQ=60)
GTGATACTTGAACTCATCCATACGCACAGCAGCGAGTTTACCGCTGAGGAAGTAGTGCTCGGCCTTACGGTTAGACTGACCATTTGTTCCCAGG > SRR4302547.2778773/1‑94 (MQ=60)
TGATACTTGAACTCATCCATACGCACAGCAGCGAGTTTACCGCTGAGGAAGTAGTGCTCGGCCTTACGGTTAGACTGACCATTTGTTCCCAGGA < SRR4302547.4933432/94‑1 (MQ=60)
TGATACTTGAACTCATCCATACGCACAGCAGCGAGTTTACCGCTGAGGAAGTAGTGCTCGGCCTTACGGTTAGACTGACCATTTGTTCCCAGGA > SRR4302547.4738266/1‑94 (MQ=60)
GATACTTGAACTCATCCATACGCACAGCAGCGAGTTTACCGCTGAGGAAGTAGTGCTCGGCCTTACGGTTAGACTGACCATTTGTTCCCAGGAA > SRR4302547.6128132/1‑94 (MQ=60)
ATACTTGAACTCATCCATACGCACAGCAGCGAGTTTACCGTTGAGGAAGTAGTGCTCGGCCTTACGGTTAGACTGACCATTTGTTCCCAGGAAG > SRR4302547.2436515/1‑94 (MQ=60)
ATACTTGAACTCATCCATACGCACAGCAGCGAGTTTACCGCTGAGGAAGTAGTGCTCGGCCTTACGGTTAGACTGACCATTTGTTCCCAGGAAG > SRR4302547.4682317/1‑94 (MQ=60)
TACTTGAACTCATCCATACGCACAGCAGCGAGTTTACCGCTGAGGAAGTAGTGCTCGGCCTTACGGTTAGACTGACCATTTGTTCCCAGGAAGA < SRR4302547.69957/94‑1 (MQ=60)
TACTTGAACTCATCCATACGCACAGCAGCGAGTTTACCGCTGAGGAAGTAGTGCTCGGCCTTACGGTTAGACTGACCATTTGTTCCCAGGAAGA > SRR4302547.2501019/1‑94 (MQ=60)
ACTTGAACTCATCCATACGCACAGCAGCGAGTTTACCGCTGAGGAAGTAGTGCTCGGCCTTACGGTTAGACTGACCATTTGTTCCCAGGAAGAA > SRR4302547.1842886/1‑94 (MQ=60)
ACTTGAACTCATCCATACGCACAGCAGCGAGTTTACCGCTGAGGAAGTAGTGCTCGGCCTTACGGTTAGACTGACCATTTGTTCCCAGGAAGAA < SRR4302547.701867/94‑1 (MQ=60)
ACTTGAACTCATCCATACGCACAGCAGCGAGTTTACCGCTGAGGAAGTAGTGCTCGGCCTTACGGTTAGACTGACCATTTGTTCCCAGGAAGAA > SRR4302547.1153541/1‑94 (MQ=60)
ACTTGAACTCATCCATACGCACAGCAGCGAGTTTACCGCTGAGGAAGTAGTGCTCGGCCTTACGGTTAGACTGACCATTTGTTCCCAGGAAGAA > SRR4302547.3219718/1‑94 (MQ=60)
CTTGACCTCATCCATACGCACAGCAGCGAGTTTACCGCTGAGGAAGTAGTGCTCGGCCTTACGGTTAGACTGACCATTTGTTCCCAGGAAGAAG < SRR4302547.820433/94‑1 (MQ=60)
CTTGAACTCATCCATACGCACAGCAGCGAGTTTACCGTTGAGGAAGTAGTGCTCGGCCTTACGGTTAGACTGACCATTTGTTCCCAGGAAGAAG > SRR4302547.2798730/1‑94 (MQ=60)
CTTGAACTCATCCATACGCACAGCAGCGAGTTTACCGCTGAGGAAGTAGTGCTCGGCCTTACGGTTAGACTGACCATTTGTTCCCAGGAAGAAG > SRR4302547.1036931/1‑94 (MQ=60)
CTTGAACTCATCCATACGCACAGCAGCGAGTTTACCGCTGAGGAAGTAGTGCTCGGCCTTACGGTTAGACTGACCATTTGTTCCCAGGAAGAAG < SRR4302547.3900560/94‑1 (MQ=60)
TTGAACTCATCCATACGCACAGCAGCGAGTTTACCGTTGAGGAAGTAGTGCTCGGCCTTACGGTTAGACTGACCATTTGTTCCCAGGAAGAAGG > SRR4302547.4208176/1‑94 (MQ=60)
TTGAACTCATCCATACGCACAGCAGCGAGTTTACCGTTGAGGAAGTAGTGCTCGGCCTTACGGTTAGACTGACCATTTGTTCCCAGGAAGAAGG < SRR4302547.3614189/94‑1 (MQ=60)
TGAACTCATCCATACGCACAGCAGCGAGTTTACCGCTGAGGAAGTAGTGCTCGGCCTTACGGTTAGACTGACCATTTGTTCCCAGGAAGAAGGA > SRR4302547.213738/1‑94 (MQ=60)
GAACTCATCCATACGCACAGCAGCGAGTTTACCGTTGAGGAAGTAGTGCTCGGCCTTACGGTTAGACTGACCATTTGTTCCCAGGAAGAAGGAT < SRR4302547.4127555/94‑1 (MQ=60)
GAACTCATCCATACGCACAGCAGCGAGTTTACCGCTGAGGAAGTAGTGCTCGGCCTTACGGTTAGACTGACCATTTGTTCCCAGGAAGAAGGAT > SRR4302547.4816830/1‑94 (MQ=60)
AACTCATCCATACGCACAGCAGCGAGTTTACCGCTGAGGAAGTAGTGCTCGGCCTTACGGTTAGACTGACCATTTGTTCCCAGGAAGAAGGATG < SRR4302547.1595484/94‑1 (MQ=60)
ACTCATCCATACGCACAGCAGCGAGTTTACCGCTGCGGAAGTAGTGCTCGGCCTTACGGTTAGACTGACCATTTGTTCCCAGGAAGAAGGATGT > SRR4302547.1737023/1‑94 (MQ=60)
CTCATCCATACGCACAGCAGCGAGTTTACCGCTGAGGAAGTAGTGCTCGGCCTTACGGTTAGACTGACCATTTGTTCCCAGGAAGAAGGATGTC > SRR4302547.1099272/1‑94 (MQ=60)
CTCATCCATACGCACAGCAGCGAGTTTACCGCTGAGGAAGTAGTGCTCGGCCTTACGGTTAGACTGACCATTTGTTCCCAGGAAGAAGGATGTC > SRR4302547.5148927/1‑94 (MQ=60)
CCATCCATACGCACAGCAGCGAGTTTACCGTTGAGGAAGTAGTGCTCGGCCTTACGGTTAGACTGACCATTTGTTCCCAGGAAGAAGGATGTCT < SRR4302547.1098462/94‑1 (MQ=60)
CATCCATACGCACAGCAGCGAGTTTACCGTTGAGGAAGTAGTGCTCGGCCTTACGGTTAGACTGACCATTTGTTCCCAGGAAGAAGGATGTCTG < SRR4302547.4904228/94‑1 (MQ=60)
CATCCATACGCACAGCAGCGAGTTTACCGCTGAGGAAGTAGTGCTCGGCCTTACGGTTAGACTGACCATTTGTTCCCAGGAAGAAGGATGTCTG < SRR4302547.6361818/94‑1 (MQ=60)
ATCCATACGCACAGCAGCGAGTTTACCGCTGAGGAAGTAGTGCTCGGCCTTACGGTTAGACTGACCATTTGTTCCCAGGAAGAAGGATGTCTGG > SRR4302547.5286951/1‑94 (MQ=60)
ATCCATACGCACAGCAGCGAGTTTACCGCTGAGGAAGTAGTGCTCGGCCTTACGGTTAGACTGACCATTTGTTCCCAGGAAGAAGGATGTCTGG < SRR4302547.6103948/94‑1 (MQ=60)
TCCATACGCACAGCAGCGAGTTTACCGCTGAGGAAGTAGTGCTCGGCCTTACGGTTAGACTGACCATTTGTTCCCAGGAAGAAGGATGTCTGGT < SRR4302547.3771152/94‑1 (MQ=60)
CCATACGCACAGCAGCGAGTTTACCGCTGAGGAAGTAGTGCTCGGCCTTACGGTTAGACTGACCATTTGTTCCCAGGAAGAAGGATGTCTGGTC > SRR4302547.3399308/1‑94 (MQ=60)
CCATACGCACAGCAGCGAGTTTACCGCTGAGGAAGTAGTGCTCGGCCTTACGGTTAGACTGACCATTTGTTCCCAGGAAGAAGGATGTCTGGTC > SRR4302547.2487149/1‑94 (MQ=60)
CATACGCACCGCAGCGAGTTTACCGCTGAGGAAGTAGTGCTCGGCCTTACGGTTAGACTGACCATTTGTTCCCAGGAAGAAGGATGTCTGGTCC > SRR4302547.6611625/1‑94 (MQ=60)
CATACGCACAGCAGCGAGTTTACCGTTGAGGAAGTAGTGCTCGGCCTTACGGTTAGACTGACCATTTGTTCCCAGGAAGAAGGATGTCTGGTCC > SRR4302547.5979001/1‑94 (MQ=60)
CATACGCACAGCAGCGAGTTTACCGCTGAGGAAGTAGTGCTCGGCCTTACGGTTAGACTGACCATTTGTTCCCAGGAAGAAGGATGTCTGGTCC < SRR4302547.1809061/94‑1 (MQ=60)
ATACGCACAGCAGCGAGTTTACCGCTGAGGAAGTAGTGCTCGGCCTTACGGTTAGACTGACCATTTGTTCCCAGGAAGAAGGATGTCTGGTCCA < SRR4302547.191869/94‑1 (MQ=60)
ATACGCACAGCAGCGAGTTTACCGCTGAGGAAGTAGTGCTCGGCCTTACGGTTAGACTGACCATTTGTTCCCAGGAAGAAGGATGTCTGGTCCA > SRR4302547.718267/1‑94 (MQ=60)
ACGCACAGCAGCGAGTTTACCGCTGAGGAAGTAGTGCTCGGCCTTACGGTTAGACTGACCATTTGTTCCCAGGAAGAAGGATGTCTGGTCCACA < SRR4302547.4547329/94‑1 (MQ=60)
ACGCACAGCAGCGAGTTTACCGCTGAGGAAGTAGTGCTCGGCCTTACGGTTAGACTGACCATTTGTTCCCAGGAAGAAGGATGTCTGGTCCACA > SRR4302547.1598950/1‑94 (MQ=60)
ACGCACAGCAGCGAGTTTACCGCTGAGGAAGTAGTGCTCGGCCTTACGGTTAGACTGACAATTTGTTCCCAGGAAGAAGGATGTCTAGTCCACA < SRR4302547.4846312/94‑1 (MQ=60)
CGCACAGCAGCGAGTTTACCGCTGAGGAAGTAGTGCTCGGCCTTACGGTTAGACTGACCATTTGTTCCCAGGAAGAAGGATGTCTGGTCCACAC > SRR4302547.4028582/1‑94 (MQ=60)
CACAGCAGCGAGTTTACCGCTGAGGAAGTAGTGCTCGGCCTTACGGTTAGACTGACCATTTGTTCCCAGGAAGAAGGATGTCTGGTCCACACCA > SRR4302547.560782/1‑94 (MQ=60)
CACAGCAGCGAGTTTACCGCTGAGGAAGTAGTGCTCGGCCTTACGGTTAGACTGACCATTTGTTCCCAGGAAGAAGGATGTCTGGTCCACACCA > SRR4302547.4228533/1‑94 (MQ=60)
CAGCAGCGAGTTTACCGCTGAGGAAGTAGTGCTCGGCCTTACGGTTTGACTTACCGTTTGTTCCCAGGGAGAAGGATGTCTGGTCCCCACCATC > SRR4302547.3552930/1‑94 (MQ=60)
AGCAGCGAGTTTGCCGTTGAGGAAGTAGTGCTCGGCCTTACGGTTAGACTGACCATTTGTTCCCAGGAAGAAGGATGTCTGGTCCACACCATCG < SRR4302547.4912825/94‑1 (MQ=60)
AGCAGCGAGTTTACCGCTGAGGAAGTAGTGCTCGGCCTTACGGTTAGACTGACCATTTGTTCCCAGGAAGAAGGATGTCTGGTCCACACCATCG < SRR4302547.2094035/94‑1 (MQ=60)
CAGCGAGTTTACCGTTGAGGAAGTAGTGCTCGGCCTTACGGTTAGACTGACCATTTGTTCCCAGGAAGAAGGATGTCTGGTCCACACCATCGAT > SRR4302547.3982396/1‑94 (MQ=60)
AGCGAGTTTACCGCTGAGGAAGTAGTGCTCGGCCTTACGGTTAGACTGACCATTTGTTCCCAGGAAGAAGGATGTCTGGTCCACACCATCGATA > SRR4302547.2554465/1‑94 (MQ=60)
AGCGAGTTTACCGCTGAGGAAGTAGTGCTCGGCCTTACGGTTAGACTGACCATTTGTTCCCAGGAAGAAGGATGTCTGGTCCACACCATCGATA < SRR4302547.3011289/94‑1 (MQ=60)
AGCGAGTTTACCGCTGAGGAAGTAGTGCTCGGCCTTACGGTTAGACTGACCATTTGTTCCCAGGAAGAAGGATGTCTGGTCCACACCATCGATA > SRR4302547.6300070/1‑94 (MQ=60)
CGAGTTTACCGCTGAGGAAGTAGTGCTCGGCCTTACGGTTAGACTGACCATTTGTTCCCAGGAAGAAGGATGTCTGGTCCACACCATCGATAAA > SRR4302547.3526849/1‑94 (MQ=60)
AGTTTACCGCTGAGGAAGTAGTGCTCGGCCTTCCGGTTAGACTGACCATTTGTTTCCAGGAAGAAGGATGTCTGGTCCACACCATCGATAAAGG > SRR4302547.4879970/1‑94 (MQ=60)
AGTTTACCGCTGAGGAAGTAGTGCTCGGCCTTACGGTTAGACTGACCATTTGTTCCCAGGAAGAAGGATGTCTGGTCCACACCATCGATAAAGG < SRR4302547.563270/94‑1 (MQ=60)
AGTTTACCGCTGAGGAAGTAGTGCTCGGCCTTACGGTTAGACTGACCATTTGTTCCCAGGAAGAAGGATGTCTGGTCCACACCATCGATAAAGG > SRR4302547.155964/1‑94 (MQ=60)
AGTTTACCGCTGAGGAAGTAGTGCTCGGCCTTACGGTTAGACTGACCATTTGTTCCCAGGAAGAAGGATGTCTGGTCCACACCATCGATAAAGG < SRR4302547.5774051/94‑1 (MQ=60)
GTTTACCGCTGAGGAAGTAGTGCTCGGCCTTACGGTTAGACTGACCATTTGTTCCCAGGAAGAAGGATGTCTGGTCCACACCATCGATAAAGGT < SRR4302547.3749246/94‑1 (MQ=60)
TTACCGCTGAGGCAGTAGTGCTCGGCCTTACGGTTAGACTGACCATTTGTTCCCAGGAAGAAGGATGTGTGGTCCACACCATCGATATAGGTGG > SRR4302547.3703079/1‑94 (MQ=60)
TTACCGCTGAGGAAGTAGTGCTCGGCCTTACGGTTAGACTGACCATTTGTTCCCAGGAAGAAGGATGTCTGGTCCACACCATCGATAAAGGTGG < SRR4302547.4758978/94‑1 (MQ=60)
TTACCGCTGAGGAAGTAGTGCTCGGCCTTACGGTTAGACTGACCATTTGTTCCCAGGAAGAAGGATGTCTGGTCCACACCATCGATAAAGGTGG < SRR4302547.4418981/94‑1 (MQ=60)
TTACCGCTGAGGAAGTAGTGCTCGGCCTTACGGTTAGACTGACCATTTGTTCCCAGGAAGAAGGATGTCTGGTCCACACCATCGATAAAGGTGG < SRR4302547.5499068/94‑1 (MQ=60)
TTACCGCTGAGGAAGTAGTGCTCGGCCTTACGGTTAGACTGACCATTTGTTCCCAGGAAGAAGGATGTCTGGTCCACACCATCGATAAAGGTGG < SRR4302547.4250345/94‑1 (MQ=60)
ACCGCTGAGGAAGTAGTGCTCGGCCTTACGGTTAGACTGACCATTTGTTCCCAGGAAGAAGGATGTCTGGTCCACACCATCGATAAAGGTGGTT < SRR4302547.5088850/94‑1 (MQ=60)
ACCGCTGAGGAAGTAGTGCTCGGCCTTACGGTTAGACTGACCATTTGTTCCCAGGAAGAAGGATGTCTGGTCCACACCATCGATAAAGGTGGTT < SRR4302547.1608562/94‑1 (MQ=60)
ACCGCTGAGGAAGTAGTGCTCGGCCTTACGGTTAGACTGACCATTTGTTCCCAGGAAGAAGGATGTCTGGTCCACACCATCGATAAAGGTGGTT < SRR4302547.5424754/94‑1 (MQ=60)
ACCGCTGAGGAAGTAGTGCTCGGCCTTACGGTTAGACTGACCATTTGTTCCCAGGAAGAAGGATGTCTGGTCCACACCATCGATAAAGGTGGTT < SRR4302547.614014/94‑1 (MQ=60)
CCGCTGAGGAAGTAGTGCTCGGCCTTACGGTTAGACTGACCATTTGTTCCCAGGAAGAAGGATGTCTGGTCCACACCATCGATAAAGGTGGTTT < SRR4302547.3474428/94‑1 (MQ=60)
CTGAGGAAGTAGTGCTCGGCCTTACGGTTAGACTGACCATTTGTTCCCAGGAAGAGGGATGTCTGGCCCACACCATCGATAAAGGTGGTTTTAG < SRR4302547.3504492/94‑1 (MQ=60)
CTGAGGAAGTAGTGCTCGGCCTTACGGTTAGACTGACCATTTGTTCCCAGGAAGAAGTATGTCTGGTCCACACCATCGATAAAGGTGGTTTTCG < SRR4302547.1157908/94‑1 (MQ=60)
CTGAGGAAGTAGTGCTCGGCCTTACGGTTAGACTGACCATTTGTTCCCAGGAAGAAGGATGTCTGGTCCACACCATCGATAAAGGTGGTTTTCG < SRR4302547.4287070/94‑1 (MQ=60)
CTGAGGAAGTAGTGCTCGGCCTTACGGTTAGACTGACCATTTGTTCCCAGGAAGAAGGATGTCTGGTCCACACCATCGATAAAGGTGGTTTTCG < SRR4302547.5642906/94‑1 (MQ=60)
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CCACCCTGATATCCGCTCTGGGTATAAGCGTAAGGTTGCTGAATCAGGACGTGATACTTGAACTCATCCATACGCACAGCAGCGAGTTTACCGTTGAGGAAGTAGTGCTCGGCCTTACGGTTAGACTGACCATTTGTTCCCAGGAAGAAGGATGTCTGGTCCACACCATCGATAAAGGTGGTTTTCG > NC_000913/3982149‑3982335
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
