Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate | Predicted Mutations | Mean Coverage | Total Reads | Percent Mapped | Mapped Reads | Average Read Length |
|---|---|---|---|---|---|---|
| A1 F1 I2 R1 | 593 | 264.2 | 13311096 | 97.8% | 13018251 | 93.0 |
Breseq alignment
| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 4,012,830 | A→G | T730A (ACG→GCG) V297A (GTT→GCT) |
metE → ysgA ← |
tetrahydropteroyltriglutamate methyltransferase hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,012,830 | 0 | A | G | 84.0% | 723.9 / 108.6 | 288 | T730A (ACG→GCG) V297A (GTT→GCT) | metE ysgA | tetrahydropteroyltriglutamate methyltransferase hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base A (23/23); new base G (134/108); total (157/131) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.22e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.09e-01 | |||||||||||
Only 100 of 304 total aligned reads displayed.
CGAGCGTGGAATGGATTGAAGCCTTGCTGAAGAAAGCGGCAAAACGCATTCCGGCAGAGCGCCTGTGGGTCAACCCGGACTGTGGCCTGAAAACGCGCGGCTGGCCAGAAACCCGCGCGGCACTGGCGAACATGGTGCAGGCGGCGCAGAACTTGCGTCGGGGGTAAAATCCAAACCGGGTG > NC_000913/4012738‑4012919 | aGCGTGGAATGGATTGAAGCCTTGCTGAAGAAAGCGGCAAAACGCATTCCGGCAGAGCGCCTGTGGGTCAACCCGGACTGTGGCCTGAAAGcg > 2:5003211/1‑93 (MQ=255) aGCGTGGAATGGATTGAAGCCTTGCTGAAGAAAGCGGCAAAACGCATTCCGGCAGAGCGCCTGTGGGTCAACCCGGACTGTGGCCTGAAAAcg < 1:167067/93‑1 (MQ=255) gCGTGGAATGGATTGAAGCCTTGCTGAAGAAAGCGGCAAAACGCATTCCGGCAGAGCGCCTGTGGGTCAACCCGGACTGTGGCCTGAAAgcgc > 2:2289402/1‑93 (MQ=255) gCGTGGAATGGATTGAAGCCTTGCTGAAGAAAGCGGCAAAACGCATTCCGGCAGAGCGCCTGTGGGTCAACCCGGACTGTGGCCTGAAAAcgc < 1:6642341/93‑1 (MQ=255) gTGGAATGGATTGAAGCCTTGCTGAAGAAAGCGGCAAAACGCATTCCGGCAGAGCGCCTGTGGGTCAACCCGGACTGTGGCCTGAAAgcgcgc < 2:5361590/93‑1 (MQ=255) ggAATGGATTGAAGCCTTGCTGAAGAAAGCGGCAAAACGCATTCCGGCAGAGCGCCTGTGGGTCAACCCGGACTGTGGCCTGAAAGCGCGCgg > 1:6462510/1‑93 (MQ=255) ggAATGGATTGAAGCCTTGCTGAAGAAAGCGGCAAAACGCATTCCGGCAGAGCGCCTGTGGGTCAACCCGGACTGTGGCCTGAAAGCGCGCgg > 1:1740361/1‑93 (MQ=255) aaTGGATTGAAGCCTTGCTGAAGAAAGCGGCAAAACGCATTCCGGCAGAGCGCCTGTGGGTCAACCCGGACTGTGGCCTGAAAGCGCGCGGCt > 2:869563/1‑93 (MQ=255) aaTGGATTGAAGCCTTGCTGAAGAAAGCGGCAAAACGCATTCCGGCAGAGCGCCTGTGGGTCAACCCGGACTGTGGCCTGAAAACGCGCGGCt > 1:4967005/1‑93 (MQ=255) aaTGGATTGAAGCCTTGCTGAAGAAAGCGGCAAAACGCATTCCGGCAGAGCGCCTGTGGGTCAACCCGGACTGTGGCCTGAAAACGCGCGGCt > 2:5611224/1‑93 (MQ=255) aTGGATTGAAGCCTTGCTGAAGAAAGCGGCAAAACGCATTCCGGCAGAGCGCCTGTGGGTCAACCCGGACTGTGGCCTGAAAGCGCGCGGCTg < 2:5239313/93‑1 (MQ=255) aTGGATTGAAGCCTTGCTGAAGAAAGCGGCAAAACGCATTCCGGCAGAGCGCCTGTGGGTCAACCCGGACTGTGGCCTGAAAACGCGCGGCTg < 1:1999285/93‑1 (MQ=255) gATTGAAGCCTTGCTGAAGAAAGCGGCAAAACGCATTCCGGCAGAGCGCCTGTGGGTCAACCCGGACTGTGGCCTGAAAGCGCGCGGCTGGcc < 1:2642038/93‑1 (MQ=255) gATTGAAGCCTTGCTGAAGAAAGCGGCAAAACGCATTCCGGCAGAGCGCCTGTGGGTCAACCCGGACTGTGGCCTGAAAACGCGCGGCTGGcc > 2:6303386/1‑93 (MQ=255) aTTGAAGCCTTGCTGAAGAAAGCGGCAAAACGCATTCCGGCAGAGCGCCTGTGGGTCAACCCGGACTGTGGCCTGAAAGCGCTCCGCTGGCCa > 1:4745119/1‑93 (MQ=255) ttGAAGCCTTGCTGAAGAAAGCGGCAAAACGCATTCCGGCAGAGCGCCTGTGGGTCAACCCGGACTGTGGCCTGAAAGCGCGCGGCTGGCCAg < 2:4835282/93‑1 (MQ=255) ttGAAGCCTTGCTGAAGAAAGCGGCAAAACGCATTCCGGCAGAGCGCCTGTGGGTCAACCCGGACTGTGGCCTGAAAACGCGCGGCTGGCCAg < 2:5431519/93‑1 (MQ=255) gAAGCCTTGCTGAAGAAAGCGGCAAAACGCATTCCGGCAGAGCGCCTGTGGGTCAACCCGGACTGTGGCCTGAAAACGCGCGGCTGGCCAGaa > 2:3990695/1‑93 (MQ=255) aaGCCTTGCTGAAGAAAGCGGCAAAACGCATTCCGGCAGAGCGCCTGTGGGTCAACCCGGACTGTGGCCTGAAAGCGCGCGGCTGGCCAGaaa > 1:2953941/1‑93 (MQ=255) aaGCCTTGCTGAAGAAAGCGGCAAAACGCATTCCGGCAGAGCGCCTGTGGGTCAACCCGGACTGTGGCCTGAAAGAGCGCGGCTGGCCAGaaa > 1:3342508/1‑93 (MQ=255) gCCTTGCTGAAGAAAGCGGCAAAACGCATTCCGGCAGAGCGCCTGTGGGTCAACCCGGACTGTGGCCTGAAAGCGCGCGGCTGGCCAGAAAcc > 2:3896999/1‑93 (MQ=255) ccTTGCTGAAGAAAGCGGCAAAACGCATTCCGGCAGAGCGCCTGTGGGTCAACCCGGACTGTGGCCTGAAAGCGCGCGGCTGGCCAGAAAccc > 1:4140671/1‑93 (MQ=255) ccTTGCTGAAGAAAGCGGCAAAACGCATTCCGGCAGAGCGCCTGTGGGTCAACCCGGACTGTGGCCTGAAAGCGCGCGGCTGGCCAGAAAccc > 2:2685862/1‑93 (MQ=255) ccTTGCTGAAGAAAGCGGCAAAACGCATTCCGGCAGAGCGCCTGTGGGTCAACCCGGACTGTGGCCTGAAAACGCGCGGCTGGCCAGAAAccc > 1:5426076/1‑93 (MQ=255) cTTGCTGAAGAAAGCGGCAAAACGCATTCCGGCAGAGCGCCTGTGGGTCAACCCGGACTGTGGCCTGAAAGCGCGCGGCTGGCCAGAAACCcg < 1:4606698/93‑1 (MQ=255) ttGCTGAAGAAAGCGGCAAAACGCATTCCGGCAGAGCGCCTGTGGGTCAACCCGGACTGTGGCCTGAAAGCGCGCGGCTGGCCCGAAAACcgc > 2:3369528/1‑93 (MQ=255) ttGCTGAAGAAAGCGGCAAAACGCATTCCGGCAGAGCGCCTGTGGGTCAACCCGGACTGTGGCCTGAAAGCGCGCGGCTGGCCAGAAACCcgc < 1:6078705/93‑1 (MQ=255) tGCTGAAGAAAGCGGCAAAACGCATTCCGGCAGAGCGCCTGTGGGTCAACCCGGACTGTGGCCTGAAAGCGCGCGGCTGGCCAGAAACCcgcg > 1:4561567/1‑93 (MQ=255) tGCTGAAGAAAGCGGCAAAACGCATTCCGGCAGAGCGCCTGTGGGTCAACCCGGACTGTGGCCTGAAAGCGCGCGGCTGGCCAGAAACCcgcg > 1:3171190/1‑93 (MQ=255) cTGAAGAAAGCGGCAAAACGCATTCCGGCAGAGCGCCTGTGGGTCAACCCGGACTGTGGCCTGAAAGCGCGCGGCTGGCCAGAAACCcgcgcg < 1:566665/93‑1 (MQ=255) tGAAGAAAGCGGCAAAACGCATTCCGGCAGAGCGCCTGTGGGTCAACCCGGACTGTGGCCTGAAAGCGCGCGGCTGGCCAGAAACCCGCGCgg > 1:5322644/1‑93 (MQ=255) gaagaaAGCGGCAAAACGCATTCCGGCAGAGCGCCTGTGGGTCAACCCGGACTGTGGCCTGAAAACGCGCGGCTGGCCAGAAACCCGCGCGGc > 2:1470229/1‑93 (MQ=255) aagaaAGCGGCAAAACGCATTCCGGCAGAGCGCCTGTGGGTCAACCCGGACTGTGGCCTGAAAGCGCGCGGCTGGCCAGAAACCCGCGCGGCa > 2:947025/1‑93 (MQ=255) agaaAGCGGGAAAACGCATTCCGGCAGAGCGCCTGTGGGTCAACCCGGACTGTGGCCTGAAAGCGCGCGGCTGGCCAGAAACCCGCGCGGCAc < 1:1178820/93‑1 (MQ=255) gaaAGCGGCAAAACGCATTCCGGCAGAGCGCCTGTGGGTCAACCCGGACTGTGGCCTGAAAGCGCGCGGCTGGCCAGAAACCCGCGCGGCACt > 1:1391171/1‑93 (MQ=255) gaaAGCGGCAAAACGCATTCCGGCAGAGCGCCTGTGGGTCAACCCGGACTGTGGCCTGAAAGCGCGCGGCTGGCCAGAAACCCGCGCGGCACt < 1:5859875/93‑1 (MQ=255) aaGCGGCAAAACGCATTCCGGCAGAGCGCCTGTGGGTCAACCCGGACTGTGGCCTGAAAGCGCGCGGCTGGCCAGAAACCCGCGCGGCACTgg > 2:2908121/1‑93 (MQ=255) aaGCGGCAAAACGCATTCCGGCAGAGCGCCTGTGGGTCAACCCGGACTGTGGCCTGAAAGCGCGCGGCTGGCCAGAAACCCGCGCGGCACTgg < 2:3562302/93‑1 (MQ=255) aaGCGGCAAAACGCATTCCGGCAGAGCGCCTGTGGGTCAACCCGGACTGTGGCCTGAAAGCGCGCGGCTGGCCAGAAACCCGCGCGGCACTgg > 2:1405174/1‑93 (MQ=255) aaGCGGCAAAACGCATTCCGGCAGAGCGCCTGTGGGTCAACCCGGACTGTGGCCTGAAAGCGCGCGGCTGGCCAGAAACCCGCGCGGCACTgg > 2:982327/1‑93 (MQ=255) aaGCGGCAAAACGCATTCCGGCAGAGCGCCTGTGGGTCAACCCGGACTGTGGCCTGAAAGCGCGCGGCTGGCCAGAAACCCGCGCGGCACTgg > 1:1915773/1‑93 (MQ=255) gCGGCAAAACGCATTCCGGCAGAGCGCCTGTGGGTCAACCCGGACTGTGGCCTGAAAGCGCGCGGCTGGCCAGAAACCCGCGCGGCACTGGCg > 2:3516503/1‑93 (MQ=255) cGGCAAAACGCATTCCGGCAGAGCGCCTGTGGGTCAACCCGGACTGTGGCCTGAAAGCGCGCGGCTGGCCAGAAACCCGCGCGGCACTGGCGa > 2:3191432/1‑93 (MQ=255) ggCAAAACGCATTCCGGCAGAGCGCCTGTGGGTCAACCCGGACTGTGGCCTGAAAGCGCGCGGCTGGCCAGAAACCCGCGCGGCACTGGCGaa < 2:3799543/93‑1 (MQ=255) gCAAAACGCATTCCGGCAGAGCGCCTGTGGGTCAACCCGGACTGTGGCCTGAAAGCGCGCGGCTGGCCAGAAACCCGCGCGGCACTGGCGAAc > 2:1224892/1‑93 (MQ=255) cAAAACGCATTCCGGCAGAGCGCCTGTGGGTCAACCCGGACTGTGGCCTGAAAGCGCGCGGCTGGCCAGAAACCCGCGCGGCACTGGCGAACa < 2:3684883/93‑1 (MQ=255) aaaaCGCATTCCGGCAGAGCGCCTGTGGGTCAACCCGGACTGTGGCCTGAAAGCGCGCGGCTGGCCAGAAACCCGCGCGGCACTGGCGAACAt > 1:389714/1‑93 (MQ=255) aaaaCGCATTCCGGCAGAGCGCCTGTGGGTCAACCCGGACTGTGGCCTGAAAGCGCGCGGCTGGCCAGAAACCCGCGCGGCACTGGCGAACAt > 1:2065750/1‑93 (MQ=255) aaaCGCATTCCGGCAGAGCGCCTGTGGGTCAACCCGGACTGTGGCCTGAAAGCGCGCGGCTGGCCAGAAACCCGCGCGGCACTGGCGAACATg < 2:240897/93‑1 (MQ=255) aaaCGCATTCCGGCAGAGCGCCTGTGGGTCAACCCGGACTGTGGCCTGAAAGCGCGCGGCTGGCCAGAAACCCGCGCGGCACTGGCGAACATg < 2:6118870/93‑1 (MQ=255) aCGCATTCCGGCAGAGCGCCTGTGGGTCAACCCGGACTGTGGCCTGAAAACGCGCGGCTGGCCAGAAACCCGCGCGGCACTGGCGAACATGGt < 1:5795501/93‑1 (MQ=255) cGCATTCCGGCAGAGCGCCTGTGGGTCAACCCGGACTGTGGCCTGAAAGCGCGCGGCTGGCCAGAAACCCGCGCGGCACTGGCGAACATGGTg < 2:6079828/93‑1 (MQ=255) cGCATTCCGGCAGAGCGCCTGTGGGTCAACCCGGACTGTGGCCTGAAAGCGCGCGGCTGGCCAGAAACCCGCGCGGCACTGGCGAACATGGTg < 2:3622115/93‑1 (MQ=255) cGCATTCCGGCAGAGCGCCTGTGGGTCAACCCGGACTGTGGCCTGAAAGCGCGCGGCTGGCCAGAAACCCGCGCGGCACTGGCGAACATGGTg > 2:5541662/1‑93 (MQ=255) cGCATTCCGGCAGAGCGCCTGTGGGTCAACCCGGACTGTGGCCTGAAAGCGCACGGCTGGCCAGAAACCCGCGCGGCACTGGCGAACATGGTg < 2:6647706/93‑1 (MQ=255) cGCATTCCGGCAGAGCGCCTGTGGGTCAACCCGGACTGTGGCCTGAAAACGCGCGGCTGGCCAGAAACCCGCGCGGCACTGGCGAACATGGtc > 2:5385415/1‑92 (MQ=255) cGCATTCCGGCAGAGCGCCTGTGGGTCAACCCGGACTGTGGCCTGAAAACGCGCGGCTGGCCAGAAACCCGCGCGGCACTGGCGAACATGGTg < 2:1067764/93‑1 (MQ=255) gCATTCCGGCAGAGCGCCTGTGGGTCAACCCGGACTGTGGCCTGAAAGCGCGCGGCTGGCCAGAAACCCGCGCGGCACTGGCGAACATGGTGc > 2:6527832/1‑93 (MQ=255) cATTCCGGCAGAGCGCCTGTGGGTCAACCCGGACTGTGGCCTGAAAGCGCGCGGCTGGCCAGAAACCCGCGCGGCACTGGCGAACATGGTGCa < 2:2778085/93‑1 (MQ=255) aTTCCGGCAGAGCGCCTGTGGGTCAACCCGGACTGTGGCCTGAAAGCGCGCGGCTGGCCAGAAACCCGCGCGGCACTGGCGAACATGGTGCAg > 2:2550428/1‑93 (MQ=255) ccGGCAGAGCGCCTGTGGGTCAACCCGGACTGTGGCCTGAAAGCGCGCGGCTGGCCAGAAACCCGCGCGGCACTGGCGAACATGGTGCAggcg < 1:2897355/93‑1 (MQ=255) ccGGCAGAGCGCCTGTGGGTCAACCCGGACTGTGGCCTGAAAGCGCGCGGCTGGCCAGAAACCCGCGCGGCACTGGCGAACATGGTGCAggcg < 1:30390/93‑1 (MQ=255) ggCAGAGCGCCTGTGGGTCAACCCGGACTGTGGCCTGAAAGCGCGCGGCTGGCCAGAAACCCGCGCGGCACTGGCGAACATGGTGCAggcggc < 2:1343860/93‑1 (MQ=255) agagCGCCTGTGGGTCAACCCTGACTGTGGCCTGAAAGCGCGCGGCTGGCCAGAAACCCGCGCGGCACTGGCGAACATGGTGCAGGCGGCGCa < 1:5148675/93‑1 (MQ=255) agCGCCTGTGGGTCAACCCGGACTGTGGCCTGAAAGCGCGCGGCTGGCCAGAAACCCGCGCGGCACTGGCGAACATGGTGCAGGCGGCGCAGa > 2:432933/1‑93 (MQ=255) agCGCCTGTGGGTCAACCCGGACTGTGGCCTGAAAGCGCGCGGCTGGCCAGAAACCCGCGCGGCACTGGCGAACATGGTGCAGGCGGCGCAGa < 2:6365620/93‑1 (MQ=255) gcgcCTGTGGGTCAACCCGGACTGTGGCCTGAAAGCGCGCGGCTGGCCAGAAACCCGCGCGGCACTGGCGAACATGGTGCAGGCGGCGCAGaa > 2:184034/1‑93 (MQ=255) gcgcCTGTGGGTCAACCCGGACTGTGGCCTGAAAGCGCGCGGCTGGCCAGAAACCCGCGCGGCACTGGCGAACATGGTGCAGGCGGCGCAGaa < 1:6328954/93‑1 (MQ=255) gcCTGTGGGTCAACCCGGACTGTGGCCTGAAAGCGCGCGGCTGGCCAGAAACCCGCGCGGCACTGGCGAACATGGTGCAGGCGGCGCAGAACt > 1:3618905/1‑93 (MQ=255) ccTGTGGGTCACCCCGGACTGTGGCCTGAAAGCGCGCGGCTGGCCAGAAACCCGCGCGGCACTGGCGAACATGGTGCAGGCGGCGCAGAACtt < 1:2335312/93‑1 (MQ=255) ccTGTGGGTCAACCCGGACTGTGGCCTGAAAGCGCGCGGCTGGCCAGAAACCCGCGCGGCACTGGCGAACATGGTGCAGGCGGCGCAGAACtt < 1:5484618/93‑1 (MQ=255) ccTGTGGGTCAACCCGGACTGTGGCCTGAAAGCGCGCGGCTGGCCAGAAACCCGCGCGGCACTGGCGAACATGGTGCAGGCGGCGCAGAACtt > 2:4393399/1‑93 (MQ=255) ccTGTGGGTCAACCCGGACTGTGGCCTGAAAACGCGCGGCTGGCCAGAAACCCGCGCGGCACTGGCGAACATGGTGCAGGCGGCGCAGAACtt > 1:343200/1‑93 (MQ=255) tgtgGGTCAACCCGGACTGTGGCCTGAAAGCGCGCGGCTGGCCAGAAACCCGCGCGGCACTGGCGAACATGGTGCAGGCGGCGCAGAACTTGc > 1:5020530/1‑93 (MQ=255) gtgGGTCAACCCGGACTGTGGCCTGAAAGCGCGCGGCTGGCCAGAAACCCGCGCGGCACTGGCGAACATGGTGCAGGCGGCGCAGAACTTGCg > 1:3812862/1‑93 (MQ=255) gggTCAACCCGGACTGTGGCCTGAAAGCGCGCGGCTGGCCAGAAACCCGCGCGGCACTGGCGAACATGGTGCAGGCGGCGCAGAACTTGCGTc > 1:2786755/1‑93 (MQ=255) gTCAACCCGGACTGTGGCCTGAAAGCGCGCGGCTGGCCAGAAACCCGCGCGGCACTGGCGAACATGGTGCAGGCGGCGCAGAACTTGCGTCgg < 2:5071080/93‑1 (MQ=255) gTCAACCCGGACTGTGGCCTGAAAACGCGCGGCTGGCCAGAAACCCGCGCGGCACTGGCGAACATGGTGCAGGCGGCGCAGAACTTGCGTCgg < 1:4656288/93‑1 (MQ=255) cAACCCGGACTGTGGCCTGAAAGCGCGCGGCTGGCCAGAAACCCGCGCGGCACTGGCGAACATGGTGCAGGCGGCGCAGAACTTGCGTCgggg < 2:3125703/93‑1 (MQ=255) cAACCCGGACTGTGGCCTGAAAACGCGCGGCTGGCCAGAAACCCGCGCGGCACTGGCGAACATGGTGCAGGCGGCGCAGAACTTGCGTCgggg > 2:5680294/1‑93 (MQ=255) aaCCCGGACTGTGGCCTGAAAGCGCGCGGCTGGCCAGAAACCCGCGCGGCACTGGCGAACATGGTGCAGGCGGCGCAGAACTTGCGTCggggg > 2:4629120/1‑93 (MQ=255) aCCCGGACTGTGGCCTGAAAGCGCGCGGCTGGCCAGAAACCCGCGCGGCACTGGCGAACATGGTGCAGGCGGCGCAGAACTTGCGTCGGGGGt > 1:954891/1‑93 (MQ=255) cccGGACTGTGGCCTGAAAGCGCGCGGCTGGCCAGAAACCCGCGCGGCACTGGCGAACATGGTGCAGGCGGCGCAGAACTTGCGTCGGGGGTa < 2:2061740/93‑1 (MQ=255) ccGGACTGTGGCCTGAAAGCGCGCGGCTGGCCAGAAACCCGCGCGGCACTGGCGAACATGGTGCAGGCGGCGCAGAACTTGCGTCGGGGGTaa > 1:1061968/1‑93 (MQ=255) cGGACTGTGGCCTGAAAGCGCGCGGCTGGCCAGAAACCCGCGCGGCACTGGCGAACATGGTGCAGGCGGCGCACAACTTGCGTCGGGGGTaaa > 1:6583195/1‑93 (MQ=255) cGGACTGTGGCCTGAAAGCGCGCGGCTGGCAAGAAACCCGCGCGGCACTGGCGAACATGGTGCAGGCGGCGCAGAACTTGCGTCGGGGGTaaa < 1:1263396/93‑1 (MQ=255) cGGACTGTGGCCTGAAAACGCGCGGCTGGCCAGAAACCCGCGCGGCACTGGCGAACATGGTGCAGGCGGCGCAGAACTTGCGTCGGGGGGaaa > 2:1723137/1‑93 (MQ=255) ggACTGTGGCCTGAAAGCGCGCGGCTGGCCAGAAACCCGCGCGGCACTGGCGAACATGGTGCAGGCGGCGCAGAACTTGCGTCGGGGGTaaaa > 2:1036615/1‑93 (MQ=255) gACTGTGGCCTGAAAGCGCGCGGCTGGCCAGAAACCCGCGCGGCACTGGCGAACATGGTGCAGGCGGCGCAGAACTTGCGTCGGGGGTAAAAt > 2:5937937/1‑93 (MQ=255) aCTGTGGCCTGAAAACGCGCGGCTGGCCAGAAACCCGCGCGGCACTGGCGAACATGGTGCAGGCGGCGCAGAACTTGCGTCGGGGGTAAAATc < 2:1532525/93‑1 (MQ=255) cTGTGGCCTGAAAGCGCGCGGCTGGCCAGAAACCCGCGCGGCACTGGCGAACATGGTGCAGGCGGCGCAGAACTTGCGTCGGGGGTAAAATcc < 1:909195/93‑1 (MQ=255) tgtgGCCTGAAAGCGCGCGGCTGGCCAGAAACCCGCGCGGCACTGGCGAACATGGTGCAGGCGGCGCAGAACTTGCGTCGGGGGTAAAATCCa < 2:454226/93‑1 (MQ=255) tgGCCTGAAAGCGCGCGGCTGGCCAGAAACCCGCGCGGCACTGGCGAACATGGTGCAGGCGGCGCAGAACTTGCGTCGGGGGTAAAATCCaaa < 1:2114019/93‑1 (MQ=255) ggCCTGAAAACGCGCGGCTGGCCAGAAACCCGCGCGGCACTGGCGAACATGGTGCAGGCGGCGCAGAACTTGCGTCGGGGGTAAAATCCAAAc < 2:4900418/93‑1 (MQ=255) gCCTGAAAGCGCGCGGCTGGCCAGAAACCCGCGCGGCACTGGCGAACATGGTGCAGGCGGCGCAGAACTTGCGTCGGGGGTAAAATCCAAAcc < 2:5859210/93‑1 (MQ=255) gCCTGAAAACGCGCGGCTGGCCAGAAACCCGCGCGGCACTGGCGAACATGGTGCAGGCGGCGCAGAACTTGCGTCGGGGGTAAAATCCAAAcc > 2:510937/1‑93 (MQ=255) tGAAAGCGCGCGGCTGGCCAGAAACCCGCGCGGCACTGGCGAACATGGTGCAGGCGGCGCAGAACTTGCGTCGGGGGTAAAATCCAAACCggg > 2:6246331/1‑93 (MQ=255) tGAAAGCGCGCGGCTGGCCAGAAACCCGCGCGGCACTGGCGAACATGGTGCAGGCGGCGCAGAACTTGCGTCGGGGGTAAAATCCAAACCggg > 1:2398928/1‑93 (MQ=255) gAAAGCGCGCGGCTGGCCAGAAACCCGCGCGGCACTGGCGAACATGGTGCAGGCGGCGCAGAACTTGCGTCGGGGGTAAAATCCAAACCGggt < 1:3124538/93‑1 (MQ=255) aaagCGCGCGGCTGGCCAGAAACCCGCGCGGCACTGGCGAACATGGTGCAGGCGGCGCAGAACTTGCGTCGGGGGTAAAATCCAAACCGggtg > 1:5370883/1‑93 (MQ=255) | CGAGCGTGGAATGGATTGAAGCCTTGCTGAAGAAAGCGGCAAAACGCATTCCGGCAGAGCGCCTGTGGGTCAACCCGGACTGTGGCCTGAAAACGCGCGGCTGGCCAGAAACCCGCGCGGCACTGGCGAACATGGTGCAGGCGGCGCAGAACTTGCGTCGGGGGTAAAATCCAAACCGGGTG > NC_000913/4012738‑4012919 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
CCGAGCGTGGAATGGATTGAAGCCTTGCTGAAGAAAGCGGCAAAACGCATTCCGGCAGAGCGCCTGTGGGTCAACCCGGACTGTGGCCTGAAAACGCGCGGCTGGCCAGAAACCCGCGCGGCACTGGCGAACATGGTGCAGGCGGCGCAGAACTTGCGTCGGGGGTAAAATCCAAACCGGGTGGTA > NC_000913/4012737‑4012922 | CCGAGCGTGGAATGGATTGAAGCCTTGCTGAAGAAAGCGGCAAAACGCATTCCGGCAGAGCGCCTGTGGGTCAACCCGGACTGTGGCCTGAAAG > SRR4302547.4829272/1‑94 (MQ=60) CGAGCGTGGAATGGATTGAAGCCTTGCTGAAGAAAGCGGCAAAACGCATTCCGGCAGAGCGCCTGTGGGTCAACCCGGACTGTGGCCTGAAAGC < SRR4302547.3932006/94‑1 (MQ=60) CGAGCGTGGAATGGATTGAAGCCTTGCTGAAGAAAGCGGCAAAACGCATTCCGGCAGAGCGCCTGTGGGTCAACCCGGACTGTGGCCTGAAAAC < SRR4302547.1392020/94‑1 (MQ=60) AGCGTGGAATGGATTGAAGCCTTGCTGAAGAAAGCGGCAAAACGCATTCCGGCAGAGCGCCTGTGGGTCAACCCGGACTGTGGCCTGAAAGCGC < SRR4302547.940457/94‑1 (MQ=60) AGCGTGGAATGGATTGAAGCCTTGCTGAAGAAAGCGGCAAAACGCATTCCGGCAGAGCGCCTGTGGGTCAACCCGGACTGTGGCCTGAAAACGC < SRR4302547.170138/94‑1 (MQ=60) GCGTGGAATGGATTGAAGCCTTGCTGAAGAAAGCGGCAAAACGCATTCCGGCAGAGCGCCTGTGGGTCAACCCTGACTGTGGCCTGAAAGCGCG < SRR4302547.6636534/94‑1 (MQ=60) GCGTGGAATGGATTGAAGCCTTGCTGAAGAAAGCGGCAAAACGCATTCCGGCAGAGCGCCTGTGGGTCAACCCGGACTGTGGCCTGAAAACGCG < SRR4302547.6780624/94‑1 (MQ=60) TGGAATGGATTGAAGCCTTGCTGAAGAAAGCGGCAAAACGCATTCCGGCAGAGCGCCTGTGGGTCAACCCGGACTGTGGCCTGAAAGCGCGCGG > SRR4302547.6597087/1‑94 (MQ=60) TGGAATGGATTGAAGCCTTGCTGAAGAAAGCGGCAAAACGCATTCCGGCAGAGCGCCTGTGGGTCAACCCGGACTGTGGCCTGAAAGCGCGCGG > SRR4302547.1774591/1‑94 (MQ=60) GAATGGATTGAAGCCTTGCTGAAGAAAGCGGCAAAACGCATTCCGGCAGAGCGCCTGTGGGTCAACCCGGACTGTGGCCTGAAAGCGCGCGGCT < SRR4302547.263067/94‑1 (MQ=60) GAATGGATTGAAGCCTTGCTGAAGAAAGCGGCAAAACGCATTCCGGCAGAGCGCCTGTGGGTCAACCCGGACTGTGGCCTGAAAACGCGCGGCT > SRR4302547.5069787/1‑94 (MQ=60) AATGGATTGAAGCCTTGCTGAAGAAAGCGGCAAAACGCATTCCGGCAGAGCGCCTGTGGGTCAACCCGGACTGTGGCCTGAAAGCGCGCGGCTG > SRR4302547.630918/1‑94 (MQ=60) ATGGATTGAAGCCTTGCTGAAGAAAGCGGCAAAACGCATTCCGGCAGAGCGCCTGTGGGTCAACCCGGACTGTGGCCTGAAAGCGCGCGGCTGG < SRR4302547.553751/94‑1 (MQ=60) ATGGATTGAAGCCTTGCTGAAGAAAGCGGCAAAACGCATTCCGGCAGAGCGCCTGTGGGTCAACCCGGACTGTGGCCTGAAAACGCGCGGCTGG < SRR4302547.3451489/94‑1 (MQ=60) ATGGATTGAAGCCTTGCTGAAGAAAGCGGCAAAACGCATTCCGGCAGAGCGCCTGTGGGTCAACCCGGACTGTGGCCTGAAAACGCGCGGCTGG < SRR4302547.2039058/94‑1 (MQ=60) TGGATTGAAGCCTTGCTGAAGAAAGCGGCAAAACGCATTCCGGCAGAGCGCCTGTGGGTCAACCCGGACTGTGGCCTGAAAGCGCGCGGCTGGC > SRR4302547.1240110/1‑94 (MQ=60) GATTGAAGCCTTGCTGAAGAAAGCGGCAAAACGCATTCCGGCAGAGCGCCTGTGGGTCAACCCGGACTGTGGCCTGAAAGCGCTCCGCTGGCCA > SRR4302547.4843454/1‑94 (MQ=60) GATTGAAGCCTTGCTGAAGAAAGCGGCAAAACGCATTCCGGCAGAGCGCCTGTGGGTCAACCCGGACTGTGGCCTGAAAGCGCGCGGCTGGCCA > SRR4302547.1850400/1‑94 (MQ=60) GATTGAAGCCTTGCTGAAGAAAGCGGCAAAACGCATTCCGGCAGAGCGCCTGTGGGTCAACCCGGACTGTGGCCTGAAAGCGCGCGGCTGGCCA > SRR4302547.4834342/1‑94 (MQ=60) GATTGAAGCCTTGCTGAAGAAAGCGGCAAAACGCATTCCGGCAGAGCGCCTGTGGGTCAACCCGGACTGTGGCCTGAAAGCGCGCGGCTGGCCA < SRR4302547.2695211/94‑1 (MQ=60) TGAAGCCTTGCTGAAGAAAGCGGCAAAACGCATTCCGGCAGAGCGCCTGTGGGTCAACCCGGACTGTGGCCTGAAAACGCGCGGCTGGCCAGAA < SRR4302547.5437681/94‑1 (MQ=60) GAAGCCTTGCTGAAGAAAGCGGCAAAACGCATTCCGGCAGAGCGCCTGTGGGTCAACCCGGACTGTGGCCTGAAAGCGCGCGGCTGGCCAGAAA > SRR4302547.3012741/1‑94 (MQ=60) GAAGCCTTGCTGAAGAAAGCGGCAAAACGCATTCCGGCAGAGCGCCTGTGGGTCAACCCGGACTGTGGCCTGAAAGAGCGCGGCTGGCCAGAAA > SRR4302547.3410159/1‑94 (MQ=60) AGCCTTGCTGAAGAAAGCGGCAAAACGCATTCCGGCAGAGCGCCTGTGGGTCAACCCGGACTGTGGCCTGAAAGCGCGCGGCTGGCCAGAAACC > SRR4302547.2775264/1‑94 (MQ=60) AGCCTTGCTGAAGAAAGCGGCAAAACGCATTCCGGCAGAGCGCCTGTGGGTCAACCCGGACTGTGGCCTGAAAACGCGCGGCTGGCCAGAAACC > SRR4302547.6735264/1‑94 (MQ=60) GCCTTGCTGAAGAAAGCGGCAAAACGCATTCCGGCAGAGCGCCTGTGGGTCAACCCGGACTGTGGCCTGAAAGCGCGCGGCTGGCCAGAAACCC > SRR4302547.4224933/1‑94 (MQ=60) GCCTTGCTGAAGAAAGCGGCAAAACGCATTCCGGCAGAGCGCCTGTGGGTCAACCCGGACTGTGGCCTGAAAGCGCGCGGCTGGCCAGAAACCC > SRR4302547.4746224/1‑94 (MQ=60) GCCTTGCTGAAGAAAGCGGCAAAACGCATTCCGGCAGAGCGCCTGTGGGTCAACCCGGACTGTGGCCTGAAAGCGCGCGGCTGGCCAGAAACCC > SRR4302547.2025112/1‑94 (MQ=60) GCCTTGCTGAAGAAAGCGGCAAAACGCATTCCGGCAGAGCGCCTGTGGGTCAACCCGGACTGTGGCCTGAAAGCGCGCGGCTGGCCAGAAACCC < SRR4302547.603758/94‑1 (MQ=60) GCCTTGCTGAAGAAAGCGGCAAAACGCATTCCGGCAGAGCGCCTGTGGGTCAACCCGGACTGTGGCCTGAAAGCGCGCGGCTGGCCAGAAACCC < SRR4302547.988922/94‑1 (MQ=60) GCCTTGCTGAAGAAAGCGGCAAAACGCATTCCGGCAGAGCGCCTGTGGGTCAACCCGGACTGTGGCCTGAAAACGCGCGGCTGGCCAGAAACCC > SRR4302547.5538283/1‑94 (MQ=60) CCTTGCTGAAGAAAGCGGCAAAACGCATTCCGGCAGAGCGCCTGTGGGTCAACCCGGACTGTGGCCTGAAAGCGCGCGGCTGGCCAGAAACCCG < SRR4302547.4471170/94‑1 (MQ=60) CTTGCTGAAGAAAGCGGCAAAACGCATTCCGGCAGAGCGCCTGTGGGTCAACCCGGACTGTGGCCTGAAAGCGCGCGGCTGGCCAGAAACCCGC > SRR4302547.5437655/1‑94 (MQ=60) CTTGCTGAAGAAAGCGGCAAAACGCATTCCGGCAGAGCGCCTGTGGGTCAACCCGGACTGTGGCCTGAAAGCGCGCGGCTGGCCAGAAACCCGC < SRR4302547.4702030/94‑1 (MQ=60) TTGCTGAAGAAAGCGGCAAAACGCATTCCGGCAGAGCGCCTGTGGGTCAACCCGGACTGTGGCCTGAAAGCGCGCGGCTGGCCAGAAACCCGCG > SRR4302547.3234304/1‑94 (MQ=60) TTGCTGAAGAAAGCGGCAAAACGCATTCCGGCAGAGCGCCTGTGGGTCAACCCGGACTGTGGCCTGAAAGCGCGCGGCTGGCCAGAAACCCGCG < SRR4302547.6204799/94‑1 (MQ=60) TTGCTGAAGAAAGCGGCAAAACGCATTCCGGCAGAGCGCCTGTGGGTCAACCCGGACTGTGGCCTGAAAGCGCGCGGCTGGCCAGAAACCCGCG > SRR4302547.4588125/1‑94 (MQ=60) TTGCTGAAGAAAGCGGCAAAACGCATTCCGGCAGAGCGCCTGTGGGTCAACCCGGACTGTGGCCTGAAAGCGCGCGGCTGGCCAGAAACCCGCG > SRR4302547.4655941/1‑94 (MQ=60) TGCTGAAGAAAGCGGCAAAACGCATTCCGGCAGAGCGCCTGTGGGTCAACCCGGACTGTGGCCTGAAAGCGCGCGGCTGGCCAGAAACCCGCGC < SRR4302547.2182108/94‑1 (MQ=60) TGCTGAAGAAAGCGGCAAAACGCATTCCGGCAGAGCGCCTGTGGGTCAACCCGGACTGTGGCCTGAAAACGCGCGGCTGGCCAGAAACCCGCGC < SRR4302547.2571855/94‑1 (MQ=60) GCTGAAGAAAGCGGCAAAACTCATTCCGGCAGAGCGCCTGTGGGTCAACCCGGACTGTGGCCTGAAAGCGCGCGGCTGGCCAGAAACCCGCGCG < SRR4302547.5550445/94‑1 (MQ=60) GCTGAAGAAAGCGGCAAAACGCATTCCGGCAGAGCGCCTGTGGGTCAACCCGGACTGTGGCCTGAAAACGCGCGGCTGGCCAGAAACCCGCGCG > SRR4302547.594367/1‑94 (MQ=60) CTGAAGAAAGCGGCAAAACGCATTCCGGCAGAGCGCCTGTGGGTCAACCCGGACTGTGGCCTGAAAGCGCGCGGCTGGCCAGAAACCCGCGCGG < SRR4302547.576850/94‑1 (MQ=60) CTGAAGAAAGCGGCAAAACGCATTCCGGCAGAGCGCCTGTGGGTCAACCCGGACTGTGGCCTGAAAGCGCGCGGCTGGCCAGAAACCCGCGCGG > SRR4302547.5432371/1‑94 (MQ=60) AAGAAAGCGGCAAAACGCATTCCGGCAGAGCGCCTGTGGGTCAACCCGGACTGTGGCCTGAAAGCGCGCGGCTGGCCAGAAACCCGCGCGGGAC > SRR4302547.1771302/1‑94 (MQ=60) AGAAAGCGGGAAAACGCATTCCGGCAGAGCGCCTGTGGGTCAACCCGGACTGTGGCCTGAAAGCGCGCGGCTGGCCAGAAACCCGCGCGGCACT < SRR4302547.1202634/94‑1 (MQ=60) AGAAAGCGGCAAAACGCATTCCGGCAGAGCGCCTGTGGGTCAACCCGGACTGTGGCCTGAAAGCGCGCGGCTGGCCAGAAACCCGCGCGGCACT > SRR4302547.1419015/1‑94 (MQ=60) GAAAGCGGCAAAACGCATTCCGGCAGAGCGCCTGTGGGTCAACCCGGACTGTGGCCTGAAAGCGCGCGGCTGGCCAGAAACCCGCGCGGCACTG < SRR4302547.5981143/94‑1 (MQ=60) GAAAGCGGCAAAACGCATTCCGGCAGAGCGCCTGTGGGTCAACCCGGACTGTGGCCTGAAAGCGCGCGGCTGGCCAGAAACCCGCGCGGCACTG < SRR4302547.489767/94‑1 (MQ=60) AAAGCGGCAAAACGCATTCCGGCAGAGCGCCTGTGGGTCAACCCGGACTGTGGCCTGAAAGCGCGCGGCTGGCCAGAAACCCGCGCGGCACTGG > SRR4302547.1953701/1‑94 (MQ=60) AAGCGGCAAAACGCATTCCGGCAGAGCGCCTGTGGGTCAACCCGGACTGTGGCCTGAAAGCGCGCGGCTGGCCAGAAACCCGCGCGGCACTGGC < SRR4302547.3474438/94‑1 (MQ=60) AAGCGGCAAAACGCATTCCGGCAGAGCGCCTGTGGGTCAACCCGGACTGTGGCCTGAAAACGCGCGGCTGGCCAGAAACCCGCGCGGCACTGGC > SRR4302547.6384778/1‑94 (MQ=60) CAAAACGCATTCCGGCAGAGCGCCTGTGGGTCAACCCGGACTGTGGCCTGAAAGCGCGCGGCTGGCCAGAAACCCGCGCGGCACTGGCGAACAT > SRR4302547.396943/1‑94 (MQ=60) CAAAACGCATTCCGGCAGAGCGCCTGTGGGTCAACCCGGACTGTGGCCTGAAAGCGCGCGGCTGGCCAGAAACCCGCGCGGCACTGGCGAACAT > SRR4302547.2106972/1‑94 (MQ=60) AAACGCATTCCGGCAGAGCGCCTGTGGGTCAACCCGGACTGTGGCCTGAAAGCGCGCGGCTGGCCAGAAACCCGCGCGGCACTGGCGAACATGG > SRR4302547.5718428/1‑94 (MQ=60) AAACGCATTCCGGCAGAGCGCCTGTGGGTCAACCCGGACTGTGGCCTGAAAGCGCGCGGCTGGCCAGAAACCCGCGCGGCACTGGCGAACATGA < SRR4302547.400839/94‑1 (MQ=60) AAACGCATTCCGGCAGAGCGCCTGTGGGTCAACCCGGACTGTGGCCTGAAAACGCGCGGCTGGCCAGAAACCCGCGCGGCACTGGCGAACATGG < SRR4302547.2026854/94‑1 (MQ=60) AACGCATTCCGGCAGAGCGCCTGTGGGTCAACCCGGACTGTGGCCTGAAAGCGCGCGGCTGGCCAGAAACCCGCGCGGCACTGGCGAACATGGT > SRR4302547.2973070/1‑94 (MQ=60) AACGCATTCCGGCAGAGCGCCTGTGGGTCAACCCGGACTGTGGCCTGAAAGCGCGCGGCTGGCCAGAAACCCGCGCGGCACTGGCGAACATGGT < SRR4302547.6505067/94‑1 (MQ=60) ACGCATTCCGGCAGAGCGCCTGTGGGTCAACCCGGACTGTGGCCTGAAAACGCGCGGCTGGCCAGAAACCCGCGCGGCACTGGCGAACATGGTG < SRR4302547.5915385/94‑1 (MQ=60) CGCATTCCGGCAGAGCGCCTGTGGGTCAACCCGGACTGTGGCCTGAAAGCGCGCGGCTGGCCAGAAACCCGCGCGGCACTGGCGAACATGGTGC > SRR4302547.1657046/1‑94 (MQ=60) CGCATTCCGGCAGAGCGCCTGTGGGTCAACCCGGACTGTGGCCTGAAAGCGAGCGGCTGGCCAGAAACCCGAGCGGCACTGGAGAACATGGTGC > SRR4302547.3195995/1‑94 (MQ=60) CATTCCGGCAGAGCGCCTGTGGGTCAACCCGGACTGTGGCCTGAAAGCGCGCGGCTGGCCAGAAACCCGCGCGGCACTGGCGAACATGGTGCAG < SRR4302547.1149399/94‑1 (MQ=60) ATTCCGGCAGAGCGCCTGTGGGTCAACCCGGACTGTGGCCTGAAAGCGCGCGGCTGGCCAGAAACCCGCGCGGCACTGGCGAACATGGTGCAGG > SRR4302547.2097842/1‑94 (MQ=60) TCCGGCAGAGCGCCTGTGGGTCAACCCGGACTGTGGCCTGAAAGCGCGCGGCTGGCCAGAAACCCGCGCGGCACTGGCGAACATGGTGCAGGCG < SRR4302547.470423/94‑1 (MQ=60) CCGGCAGAGCGCCTGTGGGTCAACCCGGACTGTGGCCTGAAAGCGCGCGGCTGGCCAGAAACCCGCGCGGCACTGGCGAACATGGTGCAGGCGG < SRR4302547.30934/94‑1 (MQ=60) CCGGCAGAGCGCCTGTGGGTCAACCCGGACTGTGGCCTGAAAGCGCGCGGCTGGCCAGAAACCCGCGCGGCACTGGCGAACATGGTGCAGGCGG < SRR4302547.2955134/94‑1 (MQ=60) CGGCAGAGCGCCTGTGGGTCAACCCGGACTGTGGCCTGAAAGCGCGCGGCTGGCCAGAAACCCGCGCGGCACTGGCGAACATGGTGCAGGCGGC < SRR4302547.320924/94‑1 (MQ=60) GGCAGAGCGCCTGTGGGTCAACCCGGACTGTGGCCTGAAAGCGCGCGGCTGGCCAGAAACCCGCGCGGCACTGGCGAACATGGTGCAGGCGGCG < SRR4302547.2147453/94‑1 (MQ=60) GCAGAGCGCCTGTGGGTCAACCCGGACTGTGGCCTGAAAGCGCGCGGCTGGCCAGAAACCCGCGCGGCACTGGCGAACATGGTGCAGGCGGCGC < SRR4302547.928272/94‑1 (MQ=60) GCAGAGCGCCTGTGAGTCAACCCGGACTGTGGCCTGAAAGCGCGCGGCTGGCCAGAAACCCGCGCGGCACTGGCGAACATGGTGCACGCGGCGC > SRR4302547.5974465/1‑94 (MQ=60) CAGAGCGCCTGTGGGTCAACCCGGACTGTGGCCTGAAAGCGCGCGGCTGGCCAGAAACCCGCGCGGCACTGGCGAACATGGTGCAGGCGGCGCA > SRR4302547.4760216/1‑94 (MQ=60) AGAGCGCCTGTGGGTCAACCCTGACTGTGGCCTGAAAGCGCGCGGCTGGCCAGAAACCCGCGCGGCACTGGCGAACATGGTGCAGGCGGCGCAG < SRR4302547.5254706/94‑1 (MQ=60) AGAGCGCCTGTGGGTCAACCCGGACTGTGGCCTGAAAGCGCGCGGCTGGCCAGAAACCCGCGCGGCACTGGCGAACATGGTGCAGGCGGCGCAG < SRR4302547.2238573/94‑1 (MQ=60) AGAGCGCCTGTGGGTCAACCCGGACTGTGGCCTGAAAGCGCGCGGCTGGCCAGAAACCCGCGCGGCACTGGCGAACATGGTGCAGGCGGCGCAG < SRR4302547.2994156/94‑1 (MQ=60) GAGCGCCTGTGGGTCAACCCGGACTGTGGCCTGAAAGCGCGCGGCTGGCCAGAAACCCGCGCGGCACTGGCGAACATGGTGCAGGCGGCGCAGA > SRR4302547.5213531/1‑94 (MQ=60) GAGCGCCTGTGGGTCAACCCGGACTGTGGCCTGAAAGCGCGCGGCTGGCCAGAAACCCGCGCGGCACTGGCGAACATGGTGCAGGCGGCGCAGA < SRR4302547.3588288/94‑1 (MQ=60) GAGCGCCTGTGGGTCAACCCGGACTGTGGCCTGAAAACGCGCGGCTGGCCAGAACCCCGCGCGGCACTGGCGAACATGGTGCAGGCGGCGCAGA < SRR4302547.601603/94‑1 (MQ=60) GCGCCTGTGGGTCAACCCGGACTGTGGCCTGAAAGCGCGCGGCTGGCCAGAAACCCGCGCGGCACTGGCGAACATGGTGCAGGCGGCGCAGAAC < SRR4302547.4855005/94‑1 (MQ=60) GCGCCTGTGGGTCAACCCGGACTGTGGCCTGAAAGCGCGCGGCTGGCCAGAAACCCGCGCGGCACTGGCGAACATGGTGCAGGCGGCGCAGAAC < SRR4302547.6460597/94‑1 (MQ=60) CGCCTGTGGGTCAACCCGGACTGTGGCCTGAAAGCGCGCGGCTGGCCAGAACCCCGCGCGGCACTGGCGAACATGGTGCAGGCGGCGCAGAACT < SRR4302547.6602869/94‑1 (MQ=60) CGCCTGTGGGTCAACCCGGACTGTGGCCTGAAAGCGCGCGGCTGGCCAGAAACCCGCGCGGCACTGGCGAACATGGTGCAGGCGGCGCAGAACT > SRR4302547.3692730/1‑94 (MQ=60) CGCCTGTGGGTCAACCCGGACTGTGGCCTGAAAGCGCGCGGCTGGCCAGAAACCCGCGCGGCACTGGCGAACATGGTGCAGGCGGCGCAGAACT < SRR4302547.4130745/94‑1 (MQ=60) GCCTGTGGGTCAACCCGGACTGTGGCCTGAAAGCGCGCGGCTGGCCAGAAACCCGCGCGGCACTGGCGAACATGGTGCAGGCGGCGCAGAACTT < SRR4302547.3925456/94‑1 (MQ=60) GCCTGTGGGTCAACCCGGACTGTGGCCTGAAAACGCGCGGCTGGCCAGAAACCCGCGCGGCACTGGCGAACATGGTGCAGGCGGCGCAGAACTT > SRR4302547.349579/1‑94 (MQ=60) CCTGTGGGTCACCCCGGACTGTGGCCTGAAAGCGCGCGGCTGGCCAGAAACCCGCGCGGCACTGGCGAACATGGTGCAGGCGGCGCAGAACTTG < SRR4302547.2382643/94‑1 (MQ=60) CCTGTGGGTCAACCCGGACTGTGGCCTGAAAGCGCGCGGCTGGCCAGAAACCCGCGCGGCACTGGCGAACATGGTGCAGGCGGCGCAGAACTTG < SRR4302547.5597875/94‑1 (MQ=60) CTGTGGGTCAACCCGGACTGTGGCCTGAAAGCGCGCGGCTGGCCAGAAACCCGCGCGGCACTGGCGAACATGGTGCAGGCGGCGCAGAACTTGC > SRR4302547.5490833/1‑94 (MQ=60) CTGTGGGTCAACCCGGACTGTGGCCTGAAAGCGCGCGGCTGGCCAGAAACCCGCGCGGCACTGGCGAACATGGTGCAGGCGGCGCAGAACTTGC > SRR4302547.2163518/1‑94 (MQ=60) CTGTGGGTCAACCCGGACTGTGGCCTGAAAGCGCGCGGCTGGCCAGAAACCCGCGCGGCACTGGCGAACATGGTGCAGGCGGCGCAGAACTTGC > SRR4302547.5124277/1‑94 (MQ=60) CTGTGGGTCAACCCGGACTGTGGCCTGAAAACGCGCGGCTGGCCAGAAACCCGCGCGGCACTGGCGAACATGGTGCAGGCGGCGCAGAACTTGC > SRR4302547.3686732/1‑94 (MQ=60) CTGTGGGTCAACCCGGACTGTGGCCTGAAAACGCGCGGCTGGCCAGAAACCCGCGCGGCACTGGCGAACATGGTGCAGGCGGCGCAGAACTTGC < SRR4302547.3409569/94‑1 (MQ=60) TGTGGGTCAACCCGGACTGTGGCCTGAAAGCGCGCGGCTGGCCAGAAACCCGCGCGGCACTGGCGAACATGGTGCAGGCGGCGCAGAACTTGCG > SRR4302547.3890561/1‑94 (MQ=60) TGTGGGTCAACCCGGACTGTGGCCTGAAAGCGCGCGGCTGGCCAGAAACCCGCGCGGCACTGGCGAACATGGTGCAGGCGGCGCAGAACTTGCG < SRR4302547.2098750/94‑1 (MQ=60) GTGGGTCAACCCGGACTGTGGCCTGAAAGCGCGCGGCTGGCCAGAAACCCGCGCGGCACTGGCGAACATGGTGCAGGCGGCGCAGAACTTGCGT > SRR4302547.243758/1‑94 (MQ=60) TGGGTCAACCCGGACTGTGGCCTGAAAGCGCGCGGCTGGCCAGAAACCCGCGCGGCACTGGCGAACATGGTGCAGGCGGCGCAGAACTTGCGTC > SRR4302547.2842576/1‑94 (MQ=60) GTCATCCCGGACTGTGGCCTGAAAGCGCGCGTCTGGCCAGAAGCCCGCGCGGCACTGGCGAACATGGTGCAGGCGGCGCAGAACTTGCGTCGGG < SRR4302547.6470042/94‑1 (MQ=60) GTCAACCCGGACTGTGGCCTGAAAGCGCGCGGCTGGCCAGAAACCCGCGCGGCACTGGCGAACATGGTGCAGGCGGCGCAGGACTTGCGTCGGG > SRR4302547.2955087/1‑94 (MQ=60) GTCAACCCGGACTGTGGCCTGAAAGCGCGCGGCTGGCCAGAAACCCGCGCGGCACTGGCGAACATGGTGCAGGCGGCGCAGAACTTGCGTCGGG < SRR4302547.4566493/94‑1 (MQ=60) GTCAACCCGGACTGTGGCCTGAAAGCGCGCGGCTGGCCAGAAACCCGCGCGGCACTGGCGAACATGGTGCAGGCGGCGCAGAACTTGCGTCGGG < SRR4302547.1531024/94‑1 (MQ=60) GTCAACCCGGACTGTGGCCTGAAAGCGCGCGGCTGGCCAGAAACCCGCGCGGCACTGGCGAACATGGTGCAGGCGGCGCAGAACTTGCGTCGGG > SRR4302547.5422782/1‑94 (MQ=60) GTCAACCCGGACTGTGGCCTGAAAACGCGCGGCTGGCCAGAAACCCGCGCGGCACTGGCGAACATGGTGCAGGCGGCGCAGAACTTGCGTCGGG < SRR4302547.4752725/94‑1 (MQ=60) TCAACCCGGACTGTGGCCTGAAAGCGCGCGGCTGGCCAGAAACCCGCGCGGCACTGGCGAACATGGTGCAGGCGGCGCAGAACTTGCGTCGGGG > SRR4302547.2534327/1‑94 (MQ=60) TCAACCCGGACTGTGGCCTGAAAGCGCGCGGCTGGCCAGAAACCCGCGCGGCACTGGCGAACATGGTGCAGGCGGCGCAGAACTTGCGTCGGGG > SRR4302547.4680250/1‑94 (MQ=60) TCAACCCGGACTGTGGCCTGAAAACGCGCGGCTGGCCAGAAACCCGCGCGGCACTGGCGAACATGGTGCAGGCGGCGCAGAACTTGCGTCGGGG < SRR4302547.726273/94‑1 (MQ=60) CAACCCGGACTGTGGCCTGAAAGCGCGCGGCTGGCCAGAAACCCGCGCGGCACTGGCGAACATGGTGCAGGCGGCGCAGAACTTGCGTCGGGGG < SRR4302547.3777346/94‑1 (MQ=60) CAACCCGGACTGTGGCCTGAAAGCGCGCGGCTGGCCAGAAACCCGCGCGGCACTGGCGAACATGGTGCAGGCGGCGCAGAACTTGCGTCGGGGG < SRR4302547.1324894/94‑1 (MQ=60) AACCCGGACTGTGGCCTGAAAGCGCGCGGCTGGCCAGAAACCCGCGCGGCACTGGCGAACATGGTGCAGGCGGCGCAGAACTTGCGTCGGGGGT < SRR4302547.5222421/94‑1 (MQ=60) AACCCGGACTGTGGCCTGAAAGCGCGCGGCTGGCCAGAAACCCGCGCGGCACTGGCGAACATGGTGCAGGCGGCGCAGAACTTGCGTCGGGGGT > SRR4302547.973443/1‑94 (MQ=60) AACCCGGACTGTGGCCTGAAAGCGCGCGGCTGGCCAGAAACCCGCGCGGCACTGGCGAACATGGTGCAGGCGGCGCAGAACTTGCGTCGGGGGG > SRR4302547.1760754/1‑94 (MQ=60) ACCCGGACTGTGGCCTGAAAGCGCGCGGCTGGCCAGAAACCCGCGCGGCACTGGCGAACATGGTGCAGGCGGCGCAGAACTTGCGTCGGGGGTA < SRR4302547.734406/94‑1 (MQ=60) CCCGGACTGTGGCCTGAAAGCGCGCGGCTGGCCAGAAACCCGCGCGGCACTGGCGAACATGGTGCAGGCGGCGCAGAACTTGCGTCGGGGGTAA > SRR4302547.1193546/1‑94 (MQ=60) CCCGGACTGTGGCCTGAAAGCGCGCGGCTGGCCAGAAACCCGCGCGGCACTGGCGAACATGGTGCAGGCGGCGCAGAACTTGCGTCGGGGGTAA > SRR4302547.1083100/1‑94 (MQ=60) CCCGGACTGTGGCCTGAAAGCGCGCGGCTGGCCAGAAACCCGCGCGGCACTGGCGAACATGGTGCAGGCGGCGCAGAACTTGCGTCGGGGGGAA > SRR4302547.6485279/1‑94 (MQ=60) CCCGGACTGTGGCCTGAAAGCGCGCGGCTGGCCAGAAACCCGCGCGGCACTGGCGAACATGGGGCAGGCGGCGCAGAACTTGCGTCGGGGGGAA > SRR4302547.3098281/1‑94 (MQ=60) CCGGACTGTGGCCTGAAAGCGCGCGGCTGGCCAGAAACCCGCGCGGCACTGGCGAACATGGTGCAGGCGGCGCACAACTTGCGTCGGGGGTAAA > SRR4302547.6720275/1‑94 (MQ=60) CGGACTGTGGCCTGAAAGCGCGCGGCTGGCCAGAAACCCGCGCGGCACTGGCGAACATGGTGCAGGCGGCGCAGCACTTGCGTCGGGGGGAAAA > SRR4302547.5811604/1‑94 (MQ=60) CGGACTGTGGCCTGAAAGCGCGCGGCTGGCCAGAAACCCGCGCGGCACTGGCGAACATGGTGCAGGCGGCGCAGAACTTGCGTCGGGGGTAAAA > SRR4302547.4682599/1‑94 (MQ=60) CGGACTGTGGCCTGAAAGCGCGCGGCTGGCAAGAAACCCGCGCGGCACTGGCGAACATGGTGCAGGCGGCGCAGAACTTGCGTCGGGGGTAAAA < SRR4302547.1288843/94‑1 (MQ=60) GACTGTGGCCTGAAAGCGCGCGGCTGGCCAGAAACCCGCGCGGCACTGGCGAACATGGTGCAGGCGGCGCAGAACTTGCGTCGGGGGTAAAATC < SRR4302547.2916755/94‑1 (MQ=60) GACTGTGGCCTGAAAGCGCGCGGCTGGCCAGAAACCCGCGCGGCACTGGCGAACATGGTGCAGGCGGCGCAGAACTTGCGTCGGGGGGAAAATC > SRR4302547.1284892/1‑94 (MQ=60) ACTGTGGCCTGAAAGCGCGCGGCTGGCCAGAAACCCGCGCGGCACTGGCGAACATGGTGCAGGCGGCGCAGAACTTGCGTCGGGGGTAAAATCC > SRR4302547.5121017/1‑94 (MQ=60) ACTGTGGCCTGAAAGCGCGCGGCTGGCCAGAAACCCGCGCGGCACTGGCGAACATGGTGCAGGCGGCGCAGAACTTGCGTCGGGGGTAAAATCC < SRR4302547.1903281/94‑1 (MQ=60) ACTGTGGCCCGAAAGTGCGCGGCTGGCCAGAAACCCGCGCCGCACTAGCGAACATGGTGCAGGCGGCGCAGAACTCGCGTCGGGGGAAAAATCC > SRR4302547.4358992/1‑94 (MQ=60) CTGTGGCCTGAAAGCGCGCGGCTGGCCAGAAACCCGCGCGGCACTGGCGAACATGGTGCAGGCGGCGCAGAACTTGCGTCGGGGGTAAAATCCA < SRR4302547.3073452/94‑1 (MQ=60) CTGTGGCCTGAAAGCGCGCGGCTGGCCAGAAACCCGCGCGGCACTGGCGAACATGGTGCAGGCGGCGCAGAACTTGCGTCGGGGGTAAAATCCA < SRR4302547.926715/94‑1 (MQ=60) GTGGCCTGAAAGCGCGCGGCTGGCCAGAAACCCGCGCGGCACTGGCGAACATGGTGCAGGCGGCGCAGAACTTGCGTCGGGGGTAAAATCCAAA > SRR4302547.3697503/1‑94 (MQ=60) TGGCCTGAAAGCGCGCGGCTGGCCAGAAACCCGCGCGGCACTGGCGAACATGGTGCAGGCGGCGCAGAACTTGCGTCGGGGGTAAAATCCAAAC < SRR4302547.2156135/94‑1 (MQ=60) GGCCTGAAAGCGCGCGGCTGGCCAGAAACCCGCGCGGCACTGGCGAACATGGTGCAGGCGGCGCAGAACTTGCGTCGGGGGTAAAATCCAAACC > SRR4302547.3138071/1‑94 (MQ=60) GGCCTGAAAACGCGCGTCTGTCCAGAACCCCGCGCGGCACTGGCGAACATGGTGCAGGCGGCGCAGAACTTGCGTCGGGGGTAAAATCCAAACC < SRR4302547.3892641/94‑1 (MQ=60) GCCTGAAAGCGCGCGGCTGGCCAGAAACCCGCGCGGCACTGGCGAACATGGTGCAGGCGGCGCAGAACTTGCGTCGGGGGTAAAATCCAAACCG < SRR4302547.5759609/94‑1 (MQ=60) GCCTGAAAGCGCGCGGCTGGCCAGAAACCCGCGCGGCACTGGCGAACATGGTGCAGGCGGCGCAGAACTTGCGTCGGGGGTAAAATCCAAACCG < SRR4302547.2150179/94‑1 (MQ=60) CTGAAAGCGCGCGGCTGGCCAGAAACCCGCGCGGCACTGGCGAACATGGTGCAGGCGGCGCAGAACTTGCGTCGGGGGTAAAATCCAAACCGGG < SRR4302547.67430/94‑1 (MQ=60) CTGAAAGCGCGCGGCTGGCCAGAAACCCGCGCGGCACTGGCGAACATGGTGCAGGCGGCGCAGAACTTGCGTCGGGGGTAAAATCCAAACCGGG > SRR4302547.2447524/1‑94 (MQ=60) CTGAAAGCGCGCGGCTGGCCAGAAACCCGCGCGGCACTGGCGAACATGGTGCAGGCGGCGCAGAACTTGCGTCGGGGGGAAAATCCAAACCGGG > SRR4302547.3153651/1‑94 (MQ=60) CTGAAAACGCGCGGCTGGCCAGAAACCCGCGCGGCACTGGCGAACATGGTCCAGGCGGCGCAGAACTTGCGTCGGGGGTAAAATCCAAACCGGG < SRR4302547.5486907/94‑1 (MQ=60) TGAAAACGCGCGGCTGGCCAGAAACCCGCGCGGCACTGGCGAACATGGTGCAGGCGGCGCAGAACTTGCGTCGGGGGTAAAATCCAAACCGGGG > SRR4302547.2386099/1‑94 (MQ=60) GAAAGCGCGCGGCTGGCCAGAACCCCGCGCGGCACTGGCGAACATGGTGCAGGCGGCGCAGAACTTGCGTCGGGGGTAAAATCCAAACCGGGTG < SRR4302547.5807278/94‑1 (MQ=60) GAAAGCGCGCGGCTGGCCAGAAACCCGCGCGGCACTGGCGAACATGGTGCAGGCGGCGCAGAACTTGCGTCGGGGGTAAAATCCAAACCGGGTG < SRR4302547.3186517/94‑1 (MQ=60) GAAAGCGCGCGGCTGGCCAGAAACCCGCGCGGCACTGGCGAACATGGTGCAGGCGGCGCAGAACTTGCGTCGGGGGTAAAATCCAAACCGGGTG > SRR4302547.2741241/1‑94 (MQ=60) GAAAGCGCGCGGCTGGCCAGAAACCCGCGCGGCACTGGCGAACATGGTGCAGGCGGCGCAGAACTTGCGTCGGGGGTAAAATCCAAACCGGGTG < SRR4302547.5116730/94‑1 (MQ=60) GAAAGCGCGCGGCTGGCCAGAAACCCGCGCGGCACTGGCGAACATGGTGCAGGCGGCGCAGAACTTGCGTCGGGGGTAAAATCCAAACCGGGTG < SRR4302547.5411440/94‑1 (MQ=60) GAAAGCGCGCGGCTGGCCAGAAACCCGCGCGGCACTGGCGAACATGGTGCAGGCGGCGCAGAACTTGCGTCGGGGGTAAAATCCAAACCGGGTG > SRR4302547.5481727/1‑94 (MQ=60) AAAGCGCGCGGCTGGCCAGAAACCCGCGCGGCACTGGCGAACATGGTGCAGGCGGCGCAGAACTTGCGTCGGGGGTAAAATCCAAACCGGGTGG < SRR4302547.3404685/94‑1 (MQ=60) AAGCGCGCGGCTGGCCAGAAACCCGCGCGTCACTGGCGAACATGGTGCAGGCGGCGCAGAACTTGCGTCGGGGGTAAAATCCAAACCGGGTGGT < SRR4302547.466402/94‑1 (MQ=60) AGCGCGCGGCTGGCCAGAAACCCGCGCGGCACTGGCGAACATGGTGCAGGCGGCGCAGAACTTGCGTCGGGGGTAAAATCCAAACCGGGTGGTA < SRR4302547.1181068/94‑1 (MQ=60) | CCGAGCGTGGAATGGATTGAAGCCTTGCTGAAGAAAGCGGCAAAACGCATTCCGGCAGAGCGCCTGTGGGTCAACCCGGACTGTGGCCTGAAAACGCGCGGCTGGCCAGAAACCCGCGCGGCACTGGCGAACATGGTGCAGGCGGCGCAGAACTTGCGTCGGGGGTAAAATCCAAACCGGGTGGTA > NC_000913/4012737‑4012922 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |