Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I2 R1 593 264.2 13311096 97.8% 13018251 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 4,186,374 T→C R1149R (CGT→CGC)  rpoC → RNA polymerase beta prime subunit

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009134,186,3740TC81.0% 544.2 / 132.3 252R1149R (CGT→CGC) rpoCRNA polymerase beta prime subunit
Reads supporting (aligned to +/- strand):  ref base T (24/24);  new base C (89/115);  total (113/139)
Fisher's exact test for biased strand distribution p-value = 4.26e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 3.72e-01

Only 100 of 270 total aligned reads displayed.

GACACCCTGGCGCGTATTCCGCAGGAATCCGGCGGTACCAAGGACATCACCGGTGGTCTGCCGCGCGTTGCGGACCTGTTCGAAGCACGTCGTCCGAAAGAGCCGGCAATCCTGGCTGAAATCAGCGGTATCGTTTCCTTCGGTAAAGAAACCAAAGGTAAACGTCGTCTGGTTATCACCCCGG  >  NC_000913/4186282‑4186465
                                                                                            |                                                                                           
    cccTGGCGCGTATTCCGCAGGAATCCGGCGGTACCAAGGACATCACCGGTGGTCTGCCGCGCGTTGCGGACCTGTTCGAAGCACGTCGCCCGa                                                                                         >  2:3178471/1‑93 (MQ=255)
      cTGGCGCGTATTCCGCAGGAATCCGGCGGTACCAAGGACATCACCGGTGGTCTGCCGCGCGTTGCGGACCTGTTCGAAGCACGTCGCCCGaaa                                                                                       >  1:4668457/1‑93 (MQ=255)
         gcgcGTATTCCGCAGGAATCCGGCGGTACCAAGGACATCACCGGTGGTCTGCCGCGCGTTGCGGACCTGTTCGAAGCACGTCGCCCGAAagag                                                                                    <  1:307978/93‑1 (MQ=255)
         gcgcGTATTCCGCAGGAATCCGGCGGTACCAAGGACATCACCGGTGGTCTGCCGCGCGTTGCGGACCTGTTCGAAGCACGTCGCCCGAAagag                                                                                    <  2:1175616/93‑1 (MQ=255)
         gcgcGTATTCCGCAGGAATCCGGCGGTACCAAGGACATCACCGGTGGTCTGCCGCGCGTTGCGGACCTGTTCGAAGCACGTCGCCCGAAagag                                                                                    >  1:1420688/1‑93 (MQ=255)
           gcgTATTCCGCAGTAATCCGGCGGTACCAAGGACATCACCGGTGGTCTGCCGCGCGTTGCGGACCTGTTCGAAGCACGTCGCCCGAAAGAGcc                                                                                  <  1:6625539/93‑1 (MQ=255)
             gTATTCCGCAGGAATCCGGCGGTACCAAGGACATCACCGGTGGTCTGCCGCGCGTTGCGGACCTGTTCGAAGCACGTCGCCCGAAAGAGCCgg                                                                                <  1:1872702/93‑1 (MQ=255)
             gTATTCCGCAGGAATCCGGCGGTACCAAGGACATCACCGGTGGTCTGCCGCGCGTTGCGGACCTGTTCGAAGCACGTCGCCCGAAAGAGCCgg                                                                                >  2:3385169/1‑93 (MQ=255)
                   cGCAGGAATCCGGCGGTACCAAGGACATCACCGGTGGTCTGCCGCGCGTTGCGGACCTGTTCGACGCACGTCGCCCGAAAGAGCCGGCAATcc                                                                          >  2:291589/1‑93 (MQ=255)
                   cGCAGGAATCCGGCGGTACCAAGGACATCACCGGTGGTCTGCCGCGCGTTGCGGACCTGTTCGAAGCACGTCGCCCGAAAGAGCCGGCAATcc                                                                          >  2:4991264/1‑93 (MQ=255)
                   cGCAGGAATCCGGCGGTACCAAGGACATCACCGGTGGTCTGCCGCGCGTTGCGGACCTGTTCGAAGCACGTCGCCCGAAAGAGCCGGCAATcc                                                                          >  2:4937820/1‑93 (MQ=255)
                   cGCAGGAATCCGGCGGTACCAAGGACATCACCGGTGGTCTGCCGCGCGTTGCGGACCTGTTCGAAGCACGTCGCCCGAAAGAGCCGGCAATcc                                                                          <  1:2477188/93‑1 (MQ=255)
                   cGCAGGAATCCGGCGGTACCAAGGACATCACCGGTGGTCTGCCGCGCGTTGCGGACCTGTTCGAAGCACGTCGCCCGAAAGAGCCGGCAATcc                                                                          <  2:2005026/93‑1 (MQ=255)
                    gcagcaGTCCGGCGGTCCCAAGGACATCACCGGTCGTCTGCCGCGCGTTGCGGCCCTGTTCGAAGCACGTCGCACGAAAGAGCCGGCAATCCt                                                                         <  1:3329144/93‑1 (MQ=255)
                    gCAGGAATCCGGCGGTACCAAGGACATCACCGGTGGTCTGCCGCGCGTTGCGGACCTGTTCGAAGCACGTCGCCCGAAAGAGCCGGCAATCCt                                                                         <  1:1373430/93‑1 (MQ=255)
                     cAGGAATCCGGCGGTACCAAGGACATCACCGGTGGTCTGCCGCGCGTTGCGGACCTGTTCGAAGCACGTCGCCCGAAAGAGCCGGCAATCCTg                                                                        <  1:5491156/93‑1 (MQ=255)
                     cAGGAATCCGGCGGTACCAAGGACATCACCGGTGGTCTGCCGCGCGTTGCGGACCTGTTCGAAGCACGTCGCCCGAAAGAGCCGGCAATCCTg                                                                        >  1:2769646/1‑93 (MQ=255)
                     cAGGAATCCGGCGGTACCAAGGACATCACCGGTGGTCTGCCGCGCGTTGCGGACCTGTTCGAAGCACGTCGCCCGAAAGAGCCGGCAATCCTg                                                                        <  1:3014658/93‑1 (MQ=255)
                     cAGGAATCCGGCGGTACCAAGGACATCACCGGTGGTCTGCCGCGCGTTGCGGACCTGTTCGAAGCACGTCGCCCGAAAGAGCCGGCAATCCTg                                                                        >  1:3282927/1‑93 (MQ=255)
                      aGGAATCCGGCGGTACCAAGGACATCACCGGTGGTCTGCCGCGCGTTGCGGACCTGTTCGAAGCACGTCGTCCGAAAGAGCCGGCAATCCTgg                                                                       <  2:5694900/93‑1 (MQ=255)
                       ggAATCCGGCGGTACCAAGGACATCACCGGTGGTCTGCCGCGCGTTGCGGACCTGTTCGAAGCACGTCGCCCGAAAGAGCCGGCAATCCTGGc                                                                      >  2:252189/1‑93 (MQ=255)
                        gAATCCGGCGGTACCAAGGACATCACCGGTGGTCTGCCGCGCGTTGCGGACCTGTTCGAAGCACGTCGCCCGAAAGAGCCGGCAATCCTGGCt                                                                     >  1:2193665/1‑93 (MQ=255)
                            ccGGCGGTACCAAGGACATCACCGGTGGTCTGCCGCGCGTTGCGGACCTGTTCGAAGCACGTCGTCCGAAAGAGCCGGCAATCCTGGCTGaaa                                                                 <  2:1648551/93‑1 (MQ=255)
                            ccGGCGGTACCAAGGACATCACCGGTGGTCTGCCGCGCGTTGCGGACCTGTTCGAAGCACGTCGCCCGAAAGAGCCGGCAATCCTGGCTGaaa                                                                 >  1:5670590/1‑93 (MQ=255)
                            ccGGCGGTACCAAGGACATCACCGGTGGTCTGCCGCGCGTTGCGGACCTGTTCGAAGCACGTCGCCCGAAAGAGCCGGCAATCCTGGCTGaaa                                                                 >  1:4152524/1‑93 (MQ=255)
                             cggcggTACCAAGGACATCACCGGTGGTCTGCCGCGCGTTGCGGACCTGTTCGAAGCACGTCGCCCGAAAGAGCCGGCAATCCTGGCTGAAAt                                                                >  2:1464857/1‑93 (MQ=255)
                              ggcggTACCAAGGACATCACCGGTGGTCTGCCGCGCGTTGCGGACCTGTTCGAAGCACGTCGTCCGAAAGAGCCGGCAATCCTGGCTGAAATc                                                               >  2:642837/1‑93 (MQ=255)
                               gcggTACCAAGGACATCACCGGTGGTCTGCCGCGCGTTGCGGACCTGTTCGAAGCACGTCGCCCGAAAGAGCCGGCAATCCTGGCTGAAATCa                                                              <  2:5105779/93‑1 (MQ=255)
                                 ggTACCAAGGACATCACCGGTGGTCTGCCGCGCGTTGCGGACCTGTTCGAAGCACGTCGTCCGAAAGAGCCGGCAATCCTGGCTGAAATCAGc                                                            >  1:6054127/1‑93 (MQ=255)
                                  gTACCAAGGACATCACCGGTGGTCTGCCGCGCGTTGCGGACCTGTTCGAAGCACGTCGCCCGAAAGAGCCGGCAATCCTGGCTGAAATCAGCg                                                           >  1:651926/1‑93 (MQ=255)
                                   tACCAAGGACATCACCGGTGGTCTGCCGCGCGTTGCGGACCTGTTCGAAGCACGTCGTCCGAAAGAGCCGGCAATCCTGGCTGAAATCAGCgg                                                          <  2:800843/93‑1 (MQ=255)
                                   gaCCAAGGACATCACCGGTGGTCTGCCGCGCGTTGCGGACCTGTTCGAAGCACGTCGCCCGAAAGAGCCGGCAATCCTGGCTGAAATCAGCgg                                                          <  1:3159836/92‑1 (MQ=255)
                                    aCCAAGGACATCACCGGTGGTCTGCCGCGAGTTGCGGACCTGTTCGAAGCACGTCGCCCGAAAGAGCCGGCAATCCTGGCTGAAATCAGCGGt                                                         >  2:4861336/1‑93 (MQ=255)
                                     ccAAGGACATCACCGGTGGTCTGCCGCGCGTTGCGGACCTGTTCGAAGCACGTCGCCCGAAAGAGCCGGCAATCCTGGCTGAAATCAGCGGTa                                                        >  1:4985016/1‑93 (MQ=255)
                                     ccAAGGACATCACCGGTGGTCTGCCGCGCGTTGCGGACCTGTTCGAAGCACGTCGCCCGAAAGAGCCGGCAATCCTGGCTGAAATCAGCGGTa                                                        >  2:3694463/1‑93 (MQ=255)
                                      cAAGGACATCACCGGTGGTCTGCCGCGCGTTGCGGACCTGTTCGAAGCACGTCGCCCGAAAGAGCCGGCAATCCTGGCTGAAATCAGCGGTAt                                                       <  2:3868725/93‑1 (MQ=255)
                                      cAAGGACATCACCGGTCGTCTGCCGCGCGTTGCGGACCTGTTCGAAGCACGTCGCCCGAAAGAGCCGGCAATCCTGGCTGAAATCAGCGGTAt                                                       <  1:1502885/93‑1 (MQ=255)
                                       aaGGACATCACCGGTGGTCTGCCGCGCGTTGCGGACCTGTTCGAAGCACGTCGCCCGAAAGAGCCGGCAATCCTGGCTGAAATCAGCGGTATc                                                      >  2:5441210/1‑93 (MQ=255)
                                        aGGACATCACCGGTGGTCTGCCGCGCGGTGCGGACCTGTTCGAAGCACGTCGCCCGAAAGAGCCGGCAATCCTGGCTGAAATCAGCGGTATCg                                                     >  2:4069138/1‑93 (MQ=255)
                                         ggACATCACCGGTGGTCTGCCGCGCGTTGCGGACCTGTTCGAAGCACGTCGCCCGAAAGAGCCGGCAATCCTGGCTGAAATCAGCGGTATCGt                                                    <  2:4817285/93‑1 (MQ=255)
                                           ccATCACCGGTGGTCGGCCGCGCGTTGCGGACCTGTCCGAAGCACGTCGCCCGAAAGAGCCGGCAATCCTGGCTGAAATCAGCGGTATCGttt                                                  <  1:3838192/92‑1 (MQ=255)
                                            cATCACCGGTGGTCTGCCGCGCGTTGCGGACCTGTTCGAAGCACGTCGCCCGAAAGAGCCGGCAATCCTGGCTGAAATCAGCGGTATCGTTTc                                                 <  2:5857503/93‑1 (MQ=255)
                                             aTCACCGGTGGTCTGCCGCGCGTTGCGGACCTGTTCGAAGCACGTCGCCCGAAAGAGCCGGCAATCCTGGCTGAAATCAGCGGTATCGTTTcc                                                >  2:6007701/1‑93 (MQ=255)
                                              tCACCGGTGGTCTGCCGCGCGTTGCGGACCTGTTCGAAGCACGTCGCCCGAAAGAGCCGGCAATCCCGGCTGAAATCAGCGGTATCGTTTCCt                                               >  1:5646740/1‑93 (MQ=255)
                                               cACCGGTGGTCTGCCGCGCGTTGCGGACCTGTTCGAAGCACGTCGTCCGAAAGAGCCGGCAATCCTGGCTGAAATCAGCGGTATCGTTTCCtt                                              <  2:2692142/93‑1 (MQ=255)
                                               cACCGGTGGTCTGCCGCGCGTTGCGGACCTGTTCGAAGCACGTCGCCCGAAAGAGCCGGCAATCCTGGCTGAAATCAGCGGTATCGTTTCCtt                                              <  1:5588996/93‑1 (MQ=255)
                                               cACCGGTGGTCTGCCGCGCGTTGCGGACCTGTTCGAAGCACGTCGCCCGAAAGAGCCGGCAATCCTGGCTGAAATCAGCGGTATCGTTTCCtt                                              >  2:349323/1‑93 (MQ=255)
                                               cACCGGTGGTCTGCCGCGCGTTGCGGACCTGTTCGAAGCACGTCGCCCGAAAGAGCCGGCAATCCTGGCTGAAATCAGCGGTATCGTTTCCtt                                              <  2:6148605/93‑1 (MQ=255)
                                                cccGGTGGTCTGCCGCGCGTTGCGGACCTGTTCGAAGCACGTCGCCCGAAAGAGCCGGCAATCCTGGCTGAAATCAGCGGTATCGTTTCCTTc                                             <  2:1311168/92‑1 (MQ=255)
                                                aCCGGTGGTCTGCCGCGCGTTGCGGACCTGTTCGAAGCACGTCGTCCGAAAGAGCCGGCAATCCTGGCTGAAATCAGCGGTATCGTTTCCTTc                                             <  1:4311319/93‑1 (MQ=255)
                                                aCCGGTGGTCTGCCGCGCGTTGCGGACCTGTTCGAAGCACGTCGCCCGAAAGAGCCGGCAATCCTGGCTGAAATCAGCGGTATCGTTTCCTTc                                             <  1:516670/93‑1 (MQ=255)
                                                 ccGGTGGTCTGCCGCGCGTTGCGGACCTGTTCGAAGCACGTCGCCCGAAAGAGCCGGCAATCCTGGCTGAAATCAGCGGTATCGTTTCCTTCg                                            >  1:5733542/1‑93 (MQ=255)
                                                    gtggtCTGCCGCGCGTTGCGGACCTGTTCGAAGCACGTCGCCCGAGAGAGCCGGCAATCCTGGCTGAAATCAGCGGTATCGTTTCCTTCGGTa                                         >  2:2269437/1‑93 (MQ=255)
                                                    gtggtCTGCCGCGCGTTGCGGACCTGTTCGAAGCACGTCGCCCGAAAGAGCCGGCAATCCTGGCTGAAATCAGCGGTATCGTTTCCTTCggga                                         >  2:1686209/1‑91 (MQ=255)
                                                     tggcCTGCCGCGCGTTGCGGACCTGTTCGAAGCACGTCGCCCGAAAGAGCCGGCAATCCTGGCTGAAATCAGCGGTATCGTTTCCTTCGGTaa                                        <  2:2561491/93‑1 (MQ=255)
                                                      ggtCTGCCGCGCGTTGCGGACCTGTTCGAAGCACGTCGCCCGAAAGAGCCGGCAATCCTGGCTGAAATCAGCGGTATCGTTTCCTTCGGTaaa                                       <  1:2809973/93‑1 (MQ=255)
                                                          tGCCGCGCGTTGCGGACCTGTTCGAAGCACGTCGTCCGAAAGAGCCGGCAATCCTGGCTGAAATCAGCGGTATCGTTTCCTTCGGTAAAGaaa                                   >  2:4200565/1‑93 (MQ=255)
                                                          tGCCGCGCGTTGCGGACCTGTTCGAAGCACGTCGCCCGAAAGAGCCGGCAATCCTGGCTGAAATCAGCGGTATCGTTTCCTTCGGTAAAGaaa                                   <  1:5096393/93‑1 (MQ=255)
                                                           gCCGCGCGTTGCGGACCTGTTCGAAGCACGTCGTCCGAAAGAGCCGGCAATCCTGGCTGAAATCAGCGGTATCGTTTCCTTCGGTAAAGAAAc                                  >  1:2720143/1‑93 (MQ=255)
                                                           gCCGCGCGTTGCGGACCTGTTCGAAGCACGTCGCCCGAAAGAGCCGGCAATCCTGGCTGAAATCAGCGGTATCGTTTCCTTCGGTAAAGAAAc                                  <  2:4720251/93‑1 (MQ=255)
                                                            ccGCGCGTTGCGGACCTGTTCGAAGCACGTCGCCCGAAAGAGCCGGCAATCCTGGCTGAAATCAGCGGTATCGTTTCCTTCGGTAAAGAAAcc                                 >  2:6506760/1‑93 (MQ=255)
                                                              gcgcgTTGCGGACCTGTTCGAAGCACGTCGTCCGAAAGAGCCGGCAATCCTGGCTGAAATCAGCGGTATCGTTTCCTTCGGTAAAGAAACCaa                               >  1:6203824/1‑93 (MQ=255)
                                                              gcgcgTTGCGGACCTGTTCGAAGCACGTCGCCCGAAAGAGCCGGCAATCCTGGCTGAAATCAGCGGTATCGTTTCCTTCGGTAAAGAAACCaa                               >  1:4163151/1‑93 (MQ=255)
                                                              gcgcgTTGCGGACCTGTTCGAAGCACGTCGCCCGAAAGAGCCGGCAATCCTGGCTGAAATCAGCGGTATCGTTTCCTTCGGTAAAGAAACCaa                               >  1:3814641/1‑93 (MQ=255)
                                                              gcgcgTTGCGGACCTGTTCGAAGCACGTCGCCCGAAAGAGCCGGCAATCCTGGCTGAAATCAGCGGTATCGTTTCCTTCGGTAAAGAAACCaa                               >  2:5727311/1‑93 (MQ=255)
                                                              gcgcgTTGCGGACCTGTTCGAAGCACGTCGCCCGAAAGAGCCGGCAATCCTGGCTGAAATCAGCGGTATCGTTTCCTTCGGTAAAGAAACCaa                               <  2:2419762/93‑1 (MQ=255)
                                                              gcgcgTTGCGGACCTGTTCGAAGCACGTCGCCCGAAAGAGCCGGCAATCCTGGCTGAAATCAGCGGTATCGTTTCCTTCGGTAAAGAAACCaa                               <  1:4012633/93‑1 (MQ=255)
                                                               cgcgTTGCGGACCTGTTCGAAGCACGTCTCCCGAAAGAGCCGGCAATCCTGGCTGAAATCAGCGGTATCGTTTCCTTCGGTAAAGAAACCaaa                              <  1:758284/93‑1 (MQ=255)
                                                                  gTTGCGGACCTGTTCGAAGCACGTCGTCCGAAAGAGCCGGCAATCCTGGCTGAAATCAGCGGTATCGTTTCCTTCGGTAAAGAAACCAAAGGt                           <  2:3069349/93‑1 (MQ=255)
                                                                  gTTGCGGACCTGTTCGAAGCACGTCGCCCGAAAGAGCCGGCAATCCTGGCTGAAATCAGCGGTATCGTTTCCTTCGGTAAAGAAACCAAAGGt                           <  1:3784738/93‑1 (MQ=255)
                                                                  gTTGCGGACCTGTTCGAAGCACGTCGCCCGAAAGAGCCGGCAATCCTGGCTGAAATCAGCGGTATCGTTTACTTCTGTAAAGAAACCAAAGGt                           >  1:3535364/1‑93 (MQ=255)
                                                                    tGCGGACCTGTTCGAAGCACGTCGTCCGAAAGAGCCGGCAATCCTGGCTGAAATCAGCGGTATCGTTTCCTTCGGTAAAGAAACCAAAGGTaa                         >  2:5256876/1‑93 (MQ=255)
                                                                      cGGACCTGTTCGAAGCACGTCGTCCGAAAGAGCCGGCAATCCTGGCTGAAATCAGCGGTATCGTTTCCTTCGGTAAAGAAACCAAAGGTAAAc                       <  1:903587/93‑1 (MQ=255)
                                                                      cGGACCTGTTCGAAGCACGTCGCCCGAAAGAGCCGGCAATCCTGGCTGAAATCAGCGGTATCGTTTCCTTCGGTAAAGAAACCAAAGGTAAAc                       >  1:3940293/1‑93 (MQ=255)
                                                                      cGGACCTGTTCGAAGCACGTCGCCCGAAAGAGCCGGCAATCCTGGCTGAAATCAGCGGTATCGTTTCCTTCGGTAAAGAAACCAAAGGTAAAc                       <  2:4570029/93‑1 (MQ=255)
                                                                       ggACCTGTTCGAAGCACGTCGCCCGAAAGAGCCGGCAATCCTGGCTGAAATCAGCGGTATCGTTTCCTTCGGTAAAGAAACCAAAGGTAAAcg                      <  1:529657/93‑1 (MQ=255)
                                                                       ggACCTGTTCGAAGCACGTCGCCCGAAAGAGCCGGCAATCCTGGCTGAAATCAGCGGTATCGTTTCCTTCGGTAAAGAAACCAAAGGTAAAcg                      <  1:6163430/93‑1 (MQ=255)
                                                                       ggACCTGTTCGAAGCACGTCGCCCGAAAGAGCCGGCAATCCTGGCTGAAATCAGCGGTATCGTTTCCTTCGGTAAAGAAACCAAAGGTAAAcg                      <  2:5270554/93‑1 (MQ=255)
                                                                        gACCTGTTCGAAGCACGTCGCCCGAAAGAGCCGGCAATCCTGGCTGAAATCAGCGGTATCGTTTCCTTCGGTAAAGAAACCAAAGGTAAAcgt                     >  2:4279451/1‑93 (MQ=255)
                                                                        gACCTGTTCGAAGCACGTCGCCCGAAAGAGCCGGCAATCCTGGCTGAAATCAGCGGTATCGTTTCCTTCGGTAAAGAAACCAAAGGTAAAcgt                     <  1:1625770/93‑1 (MQ=255)
                                                                         gccTGTTCGAAGCACGTCGCCCGAAAGAGCCGGCAATCCTGGCTGAAATCAGCGGTATCGTTTCCTTCGGTAAAGAAACCAAAGGTAAAcgtc                    <  2:1777988/92‑1 (MQ=255)
                                                                         aCCTGTTCGAAGCACGTCGCCCGAAAGAGCCGGCAATCCTGGCTGAAATCAGCGGTATCGTTTCCTTCGGTAAAGAAACCAAAGGTAAAcgtc                    <  1:1069544/93‑1 (MQ=255)
                                                                          ccTGTTCGAAGCACGTCGCCCGAAAGAGCCGGCAATCCTGGCTGAAATCAGCGGTATCGTTTCCTTCGGTAAAGAAACCAAAGGTAAAcgtcg                   >  1:2901345/1‑93 (MQ=255)
                                                                          ccTGTTCGAAGCACGTCGCCCGAAAGAGCCGGCAATCCTGGCTGAAATCAGCGGTATCGTTTCCTTCGGTAAAGAAACCAAAGGTAAAcgtcg                   >  1:2055113/1‑93 (MQ=255)
                                                                           cTGTTCGAAGCACGTCGCCCGAAAGAGCCGGCAATCCTGGCTGAAATCAGCGGAATCGTTTCCTTCCGTAAAGAAACCAAAGGAAAAcgtcgt                  >  1:4908144/1‑93 (MQ=255)
                                                                            tGTTCGAAGCACGTCGCCCGAAAGAGCCGGCAATCCTGGCTGAAATCAGCGGTATCGTTTCCTTCGGTAAAGAAACCAAAGGTAAACgtcgtc                 >  1:4207323/1‑93 (MQ=255)
                                                                              ttCGAAGCACGTCGCCCGAAAGAGCCGGCAATCCTGGCTGAAATCAGCGGTATCGTTTCCTTCGGTAAAGAAACCAAAGGTAAACGTCGTCTg               >  2:3317271/1‑93 (MQ=255)
                                                                               tCGAAGCACGTCGTCCGAAAGAGCCGGCAATCCTGGCTGAAATCAGCGGTATCGTTTCCTTCGGTAAAGAAACCAAAGGTAAACGTCGTCTgg              <  1:5814360/93‑1 (MQ=255)
                                                                               tCGAAGCACGTCGCCCGAAAGAGCCGGCAATCCTGGCTGAAATCAGCGGTATCGTTTCCTTCGGTAAAGAAACCAAAGGTAAACGTCGTCTgg              <  1:1019743/93‑1 (MQ=255)
                                                                                cGAAGCACGTCGTCCGAAAGAGCCGGCAATCCTGGCTGAAATCAGCGGTATCGTTTCCTTCGGTAAAGAAACCAAAGGTAAACGTCGTCTGGt             <  2:2168728/93‑1 (MQ=255)
                                                                                  aaGCACGTCGCCCGAAAGAGCCGGCAATCCTGGCTGAAATCAGCGGTATCGTTTCCTTCGGTAAAGAAACCAAAGGTAAACGTCGTCTGGTTa           <  2:2974903/93‑1 (MQ=255)
                                                                                  aaGCACGTCGCCCGAAAGAGCCGGCAATCCTGGCTGAAATCAGCGGTATCGTTTCCTTCGGTAAAGAAACCAAAGGTAAACGTCGTCTGGTTa           >  2:6110677/1‑93 (MQ=255)
                                                                                   aGCACGTCGTCCGAAAGAGCCGGCAATCCTGGCTGAAATCAGCGGTATCGTTTCCTTCGGTAAAGAAACCAAAGGTAAACGTCGTCTGGTTAt          >  1:52026/1‑93 (MQ=255)
                                                                                   aGCACGTCGCCCGAAAGAGCCGGCAATCCTGGCTGAAATCAGCGGTATCGTTTCCTTCGGTAAAGAAACCAAAGGTAAACGTCGTCTGGTTAt          <  2:5340387/93‑1 (MQ=255)
                                                                                    gCACGTCGCCCGAAAGAGCCGGCAATCCTGGCTGAAATCAGCGGTATCGTTTCCTTCGGTAAAGAAACCAAAGGTAAACGTCGTCTGGTTATc         <  1:6424960/93‑1 (MQ=255)
                                                                                     cACGTCGTCCGAAAGAGCCGGCAATCCTGGCTGAAATCAGCGGTATCGTTTCCTTCGGTAAAGAAACCAAAGGTAAACGTCGTCTGGTTATCa        >  1:1274460/1‑93 (MQ=255)
                                                                                        gtcgccCGAAAGAGCCGGCAATCCTGGCTGAAATCAGCGGTATCGTTTCCTTCGGTAAAGAAACCAAAGGTAAACGTCGTCTGGTTATCAccc     <  2:4406473/93‑1 (MQ=255)
                                                                                         tcgtcCGAAAGAGCCGGCAATCCTGGCTGAAATCAGCGGTATCGTTTCCTTCGGTAAAGAAACCAAAGGTAAACGTCGTCTGGTTATCAcccc    >  1:2618909/1‑93 (MQ=255)
                                                                                         tcgccCGAAAGAGCCGGCAATCCTGGCTGAAATCAGCGGTATCGTTTCCTTCGGTAAAGAAACCAAAGGTAAACGTCGTCTGGTTATCAcccc    <  2:5623069/93‑1 (MQ=255)
                                                                                           gtcCGAAAGAGCCGGCAATCCTGGCTGAAATCAGCGGTATCGTTTCCTTCGGTAAAGAAACCAAAGGTAAACGTCGTCTGGTTATCACCCCgg  >  1:1562101/1‑93 (MQ=255)
                                                                                            |                                                                                           
GACACCCTGGCGCGTATTCCGCAGGAATCCGGCGGTACCAAGGACATCACCGGTGGTCTGCCGCGCGTTGCGGACCTGTTCGAAGCACGTCGTCCGAAAGAGCCGGCAATCCTGGCTGAAATCAGCGGTATCGTTTCCTTCGGTAAAGAAACCAAAGGTAAACGTCGTCTGGTTATCACCCCGG  >  NC_000913/4186282‑4186465

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output
TGACACCCTGGCGCGTATTCCGCAGGAATCCGGCGGTACCAAGGACATCACCGGTGGTCTGCCGCGCGTTGCGGACCTGTTCGAAGCACGTCGTCCGAAAGAGCCGGCAATCCTGGCTGAAATCAGCGGTATCGTTTCCTTCGGTAAAGAAACCAAAGGTAAACGTCGTCTGGTTATCACCCCGGT  >  NC_000913/4186281‑4186466
                                                                                             |                                                                                            
TGACACCCTGGCGCGTATTCCGCAGGAATCCGGCGGTACCAAGGACATCACCGGTGGTCTGCCGCGCGTTGCGGACCTGTTCGAAGCACGTCGT                                                                                              >  SRR4302547.31802/1‑94 (MQ=60)
 GACACCCTGGCGCGTATTCCGCAGGAATCCGGCGGTACCAAGGACATCACCGGTGGTCTGCCGCGCGTTGCGGACCTGTTCGAAGCACGTCGCC                                                                                             <  SRR4302547.123014/94‑1 (MQ=60)
  ACACCCTGGCGCGTATTCCGCAGGAATCCGGCGGTACCAAGGACATCACCGGTGGTCTGCCGCGCGTTGCGGACCTGTTCGAAGCACGTCGCCC                                                                                            <  SRR4302547.887865/94‑1 (MQ=60)
      CCTGGCGCGTATTCCGCAGGAATCCGGCGGTACCAAGGACATCACCGGTGGTCTGCCGCGCGTTGCGGACCTGTTCGAAGCACGTCGCCCGAAA                                                                                        >  SRR4302547.810316/1‑94 (MQ=60)
      CCTGGCGCGTATTCCGCAGGAATCCGGCGGTACCAAGGACATCACCGGTGGTCTGCCGCGCGTTGCGGACCTGTTCGAAGCACGTCGCCCGAAA                                                                                        >  SRR4302547.4765140/1‑94 (MQ=60)
       CTGGCGCGTATTCCGCAGGAATCCGGCGGTACCAAGGACATCACCGGTGGTCTGCCGCGCGTTGCGGACCTGTTCGAAGCACGTCGTCCGAAAG                                                                                       <  SRR4302547.42727/94‑1 (MQ=60)
        TGGCGCGTATTCCGCAGGAATCCGGCGGTACCAAGGACATCACCGGTGGTCTGCCGCGCGTTGCGGACCTGTTCGAAGCACGTCGTCCGAAAGA                                                                                      >  SRR4302547.1974658/1‑94 (MQ=60)
         GGCGCGTATTCCGCAGGAATCCGGCGGTACCAAGGACATCACCGGTGGTCTGCCGCGCGTTGCGGACCTGTTCGAAGCACGTCGCCCGAAAGAG                                                                                     >  SRR4302547.1449128/1‑94 (MQ=60)
         GGCGCGTATTCCGCAGGAATCCGGCGGTACCAAGGACATCACCGGTGGTCTGCCGCGCGTTGCGGACCTGTTCGAAGCACGTCGCCCGAAAGAG                                                                                     >  SRR4302547.1446998/1‑94 (MQ=60)
          GCGCGTATTCCGCAGGAATCCGGCGGTACCAAGGACATCACCGGTGGTCTGCCGCGCGTTGCGGACCTGTTCGAAGCACGTCGCCCGAAAGAGC                                                                                    <  SRR4302547.313711/94‑1 (MQ=60)
          GCGCGTATTCCGCAGGAATCCGGCGGTACCAAGGACATCACCGGTGGTCTGCCGCGCGTTGCGGACCTGTTCGAAGCACGTCGCCCGAAAGAGC                                                                                    >  SRR4302547.429643/1‑94 (MQ=60)
           CGCGTATTCCGCAGGAATCCGGCGGTACCAAGGACATCACCGGTGGTCTGCCGCGCGTTGCGGACCTGTTCGAAGCACGTCGCCCGAAAGAGCC                                                                                   >  SRR4302547.5496182/1‑94 (MQ=60)
           CGCGTATTCCGCAGGAATCCGGCGGTACCAAGGACATCACCGGTGGTCTGCCGCGCGTTGCGGACCTGTTCGAAGCACGTCGCCCGAAAGAGCC                                                                                   <  SRR4302547.6116402/94‑1 (MQ=60)
            GCGTATTCCGCAGTAATCCGGCGGTACCAAGGACATCACCGGTGGTCTGCCGCGCGTTGCGGACCTGTTCGAAGCACGTCGCCCGAAAGAGCCG                                                                                  <  SRR4302547.6763466/94‑1 (MQ=60)
            GCGTATTCCGCAGGAATCCGGCGGTACCAAGGACATCACCGGTGGTCTGCCGCGCGTTGCGGACCTGTTCGAAGCACGTCGCCCTAAAGAGCCG                                                                                  <  SRR4302547.2837861/94‑1 (MQ=60)
            GCGTATTCCGCAGGAATCCGGCGGTACCAAGGACATCACCGGTGGTCTGCCGCGCGTTGCGGACCTGTTCGAAGCACGTCGCCCGAAAGAGCCG                                                                                  <  SRR4302547.2197745/94‑1 (MQ=60)
             CGTATTCCGCAGGAATCCGGCGGTACCAAGGACATCACCGGTGGTCTGCCGCGCGTTGCGGACCTGTTCGAAGCACGTCGTCCGAAAGAGCCGG                                                                                 >  SRR4302547.5008936/1‑94 (MQ=60)
             CGTATTCCGCAGGAATCCGGCGGTACCAAGGACATCACCGGTGGTCTGCCGCGCGTTGCGGACCTGTTCGAAGCACGTCGCCCGAAAGAGCCGG                                                                                 >  SRR4302547.5814959/1‑94 (MQ=60)
              GTATTCCGCAGGAATCCGGCGGTACCAAGGACATCACCGGTGGTCTGCCGCGCGTTGCGGACCTGTTCGAAGCACGTCGCCCGAAAGAGCCGGC                                                                                <  SRR4302547.1909697/94‑1 (MQ=60)
                 TTCCGCAGGAATCCGGCGGTACCAAGGACATCACCGGTGGTCTGCCGCGCGTTGCGGACCTGTTCGAAGCACGTCGCCCGAAAGAGCCGGCAAT                                                                             <  SRR4302547.4246088/94‑1 (MQ=60)
                  TCCGCAGGAATCCGGCGGTACCAAGGACATCACCGGTGGTCTGCCGCGCGTTGCGGACCTGTTCGAAGCACGTCGTCCGAAAGAGCCGGCAATC                                                                            >  SRR4302547.5134062/1‑94 (MQ=60)
                   CCGCAGGAATCCGGCGGTACCAAGGACATCACCGGTGGTCTGCCGCGCGTTGCGGACCTGTTCGAAGCACGTCGTCCGAAAGAGCCGGCAATCC                                                                           >  SRR4302547.3939204/1‑94 (MQ=60)
                    CGCAGGAATCCGGCGGTACCAAGGACATCACCGGTGGTCTGCCGCGCGTTGCGGACCTGTTCGAAGCACGTCGCCCGAAAGAGCTGGCAATCCT                                                                          <  SRR4302547.6622112/94‑1 (MQ=60)
                    CGCAGGAATCCGGCGGTACCAAGGACATCACCGGTGGTCTGCCGCGCGTTGCGGACCTGTTCGAAGCACGTCGCCCGAAAGAGCCGGCAATCCT                                                                          <  SRR4302547.2527267/94‑1 (MQ=60)
                     gcaagaaacgtcgaagacccgtGACATCACCGGTGGTCTGCCACGCGTTGCCGACCTGTTCGAAGCGCGTCGTCCGAAAGAagcctcgatcctg                                                                         >  SRR4302547.159953/23‑81 (MQ=60)
                     GCAGGAATCCGGCGGTACCAAGGACATCACCGGTGGTCTGCCGCGCGTTGCGGACCTGTTCGAAGCACGTCGCCCGAAAGAGCCGGCAATCCTG                                                                         >  SRR4302547.3348750/1‑94 (MQ=60)
                     GCAGGAATCCGGCGGTACCAAGGACATCACCGGTGGTCTGCCGCGCGTTGCGGACCTGTTCGAAGCACGTCGCCCGAAAGAGCCGGCAATCCTG                                                                         >  SRR4302547.2825137/1‑94 (MQ=60)
                     GCAGGAATCCGGCGGTACCAAGGACATCACCGGTGGTCTGCCGCGCGTTGCGGACCTGTTCGAAGCACGTCGCCCGAAAGAGCCGGCAATCCTG                                                                         <  SRR4302547.1400973/94‑1 (MQ=60)
                     GCAGCAGTCCGGCGGTCCCAAGGACATCACCGGTCGTCTGCCGCGCGTTGCGGCCCTGTTCGAAGCACGTCGCACGAAAGAGCCGGCAATCCTG                                                                         <  SRR4302547.3396462/94‑1 (MQ=60)
                      CAGGAATCCGGCGGTACCAAGGACATCACCGGTGGTCTGCCGCGCGTTGCGGACCTGTTCGAAGCACGTCGCCCGAAAGAGCCGGCAATCCTGG                                                                        <  SRR4302547.4092347/94‑1 (MQ=60)
                      CAGGAATCCGGCGGTACCAAGGACATCACCGGTGGTCTGCCGCGCGTTGCGGACCTGTTCGAAGCACGTCGCCCGAAAGAGCCGGCAATCCTGG                                                                        <  SRR4302547.3074614/94‑1 (MQ=60)
                      CAGGAATCCGGCGGTACCAAGGACATCACCGGTGGTCTGCCGCGCGTTGCGGACCTGTTCGAAGCACGTCGCCCGAAAGAGCCGGCAATCCTGG                                                                        <  SRR4302547.5604539/94‑1 (MQ=60)
                       AGGAATCCGGCGGTACCAAGGACATCACCGGTGGTCTGCCGCGCGTTGCGGACCTGTTCGAAGCACGTCGCCCGAAAGAGCCGGCAATCCTGGC                                                                       <  SRR4302547.4448603/94‑1 (MQ=60)
                       AGGAATCCGGCGGTACCAAGGACATCACCGGTGGTCTGCCGCGCGTTGCGGACCTGTTCGAAGCACGTCCTCCGAAAGAGCCGGCAATCCTGGC                                                                       >  SRR4302547.5772058/1‑94 (MQ=60)
                        GGAATCCGGCGGTACCAAGGACATCACCGGTGGTCTGCCGCGCGTTGCGGACCTGTTCGAAGCACGTCGCCCGAAAGAGCCGGCAATCCTGGCT                                                                      >  SRR4302547.2237712/1‑94 (MQ=60)
                        GGAATCCGGCGGTACCAAGGACATCACCGGTGGTCTGCCGCGCGTTGCGGACCTGTTCGAAGCACGTCGCCCGAAAGAGCCAGCAATCCTGGCT                                                                      >  SRR4302547.1462659/1‑94 (MQ=60)
                        GGAATCCGGCGCTACCAAGGACATCACCGGTGGTCTTGCGCGCGTTGCGGACCTGTCCGAAGCACGTCGCCCGAAAGAGCCGGCAATCCTGGCT                                                                      <  SRR4302547.4358496/94‑1 (MQ=60)
                         GAATCCGGCGGTACTAAGGACATCACCGGTCGTCTGCCGCGCGTTGCGGACCTGTTCGAAGCACGTCGCCCGAAAGAGCCGGCAATCCTGGCTG                                                                     <  SRR4302547.1090356/94‑1 (MQ=60)
                           ATCCGGCGGTACCAAGGACATCACCGGTGGTCTGCCGCGCGTTGCGGACCTGTTCGAAGCACGTCGCCCGAAAGAGCCGGCAATCCTGGCTGAA                                                                   <  SRR4302547.4860557/94‑1 (MQ=60)
                            TCCGGCGGTACCAAGGACATCACCGGTGGTCTGCCGCGCGTTGCGGACCTGTTCGAAGCACGTCGCCCGAAAGAGCCGGCAATCCTGGCTGAAA                                                                  >  SRR4302547.4237105/1‑94 (MQ=60)
                            TCCGGCGGTACCAAGGACATCACCGGTGGTCTGCCGCGCGTTGCGGACCTGTTCGAAGCACGTCGCCCGAAAGAGCCGGCAATCCTGGCTGAAA                                                                  >  SRR4302547.5787678/1‑94 (MQ=60)
                              CGGCGGTACCAAGGACATCACCGGTGGTCTGCCGCGCGTTGCGGACCTGTTCGAAGCACGTCGTCCGAAAGAGCCGGCAATCCTGGCTGAAATC                                                                <  SRR4302547.2986048/94‑1 (MQ=60)
                               GGCGGTACCAAGGACATCACCGGTGGTCTGCCGCGCGTTGCGGACCTGTTCGAAGCACGTCGTCCGAAAGAGCCGGCAATCCTGGCTGAAATCA                                                               >  SRR4302547.5861940/1‑94 (MQ=60)
                                GCGGTACCAAGGACATCACTGGTGGTCTGCCGCGCGTTGCGGACCTGTTCGAAGCACGTCGCCCGAAAGAGCCGGCAATCCTGGCTGAAATCAG                                                              >  SRR4302547.1258908/1‑94 (MQ=60)
                                 CGGTACCAAGGACATCACCGGTGGTCTGCCGCGCGTTGCGGACCTGTTCGAAGCACGTCGTCCGAAAGAGCCGGCAATCCTGGCTGAAATCAGC                                                             >  SRR4302547.6179709/1‑94 (MQ=60)
                                  GGTACCAAGGACATCACCGGTGGTCTGCCGCGCGTTGCGGACCTGTTCGAAGCACGTCGCCCGAAAGAGCCGGCAATCCTGGCTGAAATCAGCG                                                            >  SRR4302547.663930/1‑94 (MQ=60)
                                  GGTACCAAGGACATCACCGGTGGTCTGCCGCGCGTTGCGGACCTGTTCGAAGCACGTCGCCCGAAAGAGCCGGCAATCCTGGCTGAAATCAGCG                                                            >  SRR4302547.1321301/1‑94 (MQ=60)
                                    TACCAAGGACATCACCGGTGGTCTGCCGCGCGTTGCGGACCTGTTCGAAGCACGTCGCCCGAAAGAGCCGGCAATCCTGGCTGAAATCAGCGGT                                                          <  SRR4302547.3803365/94‑1 (MQ=60)
                                    TACCAAGGACATCACCGGTGGTCTGCCGCGCGTTGCGGACCTGTTCGAAGCACGTCGCCCGAAAGAGCCGGCAATCCTGGCTGAAATCAGCGGT                                                          >  SRR4302547.100420/1‑94 (MQ=60)
                                    GACCAAGGACATCACCGGTGGTCTGCCGCGCGTTGCGGACCTGTTCGAAGCACGTCGCCCGAAAGAGCCGGCAATCCTGGCTGAAATCAGCGGT                                                          <  SRR4302547.3222691/94‑1 (MQ=60)
                                     ACCAAGGACATCACCGGTGGTCTGCCGCGCGTTGCGGACCTGTTCGAAGCACGTCGCCCGAAAGAGCCGGCAATCCTGGCTGAAATCAGCGGTA                                                         >  SRR4302547.5088093/1‑94 (MQ=60)
                                      CCAAGGACATCACCGGTGGTCTGCCGCGCGTTGCGGACCTGTTCGAAGCACGTCGCCCGAAAGAGCCGGCAATCCTGGCTGAAATCAGCGGTAT                                                        >  SRR4302547.215660/1‑94 (MQ=60)
                                       CAAGGACATCACCGGTCGTCTGCCGCGCGTTGCGGACCTGTTCGAAGCACGTCGCCCGAAAGAGCCGGCAATCCTGGCTGAAATCAGCGGTATC                                                       <  SRR4302547.1532845/94‑1 (MQ=60)
                                        AAGGACATCACCGGTGGTCTGCCGCGCGTTGCGGACCTGTTCGAAGCACGTCGCCCGAAAGAGCCGGCAATCCTGGCTGAAATCAGCGGTATCG                                                      >  SRR4302547.1680952/1‑94 (MQ=60)
                                           GACATCACCGGTGGTCTGCCGCGCGTTGCGGACCTGTTCGAAGCACGTCGCCCGAAAGAGCCGGCAATCCTGGCTGAAATCAGCGGTATGGTTT                                                   >  SRR4302547.6068361/1‑94 (MQ=60)
                                           GACATCACCGGTGGTCTGCCGCGCGTTGCGGACCTGTTCGAAGCACGTCGCCCGAAAGAGCCGGCAATCCTGGCTGAAATCAGCGGTATCGTTT                                                   <  SRR4302547.3368175/94‑1 (MQ=60)
                                            CCATCACCGGTGGTCGGCCGCGCGTTGCGGACCTGTCCGAAGCACGTCGCCCGAAAGAGCCGGCAATCCTGGCTGAAATCAGCGGTATCGTTTC                                                  <  SRR4302547.3916369/94‑1 (MQ=60)
                                            ACATCACCGGTGGTCTGCCGCGCGTTGCGGACCTGTTCGAAGCACGTCGCCCGAAAGAGCCGGCAATCCTGGCTGAAATCAGCGGTATCGTTTC                                                  <  SRR4302547.3916368/94‑1 (MQ=60)
                                             CATCACCGGTGGTCTGCCGCGCGTTGCGGACCTGTTCGAAGCACGTCGTCCGAAAGAGCCGGCAATCCTGGCTGAAATCAGCGGTATCGTTTCC                                                 <  SRR4302547.1393377/94‑1 (MQ=60)
                                             CATCACCGGTGGTCTGCCGCGCGTTGCGGACCTGTTCGAAGCACGTCGTCCGAAAGAGCCGGCAATCCTGGCTGAAATCAGCGGTATCGTTTCC                                                 >  SRR4302547.1657248/1‑94 (MQ=60)
                                              ATCACCGGTGGTCTGCCGCGCGTTGCGGACCTGTTCGAAGCACGTCGCCCGAAAGAGCCGGCAATCCTGGCTGAAATCAGCGGTATCGTTTCCT                                                <  SRR4302547.1696998/94‑1 (MQ=60)
                                              ATCACCGGTGGTCTGCCGCGCGTTGCGGACCTGTTCGAAGCACGTCGCCCGAAAGAGCCGGCAATCCTGGCTGAAATCAGCGGTATCGTTTCCT                                                <  SRR4302547.276158/94‑1 (MQ=60)
                                              ATCACCGGTGGTCTGCCGCGCGTTGCGGACCTGTTCGAAGCACGTCGCCCGAAAGAGCCGGCAATCCCGGCTGAAATCAGCGGTATCGTTTCCT                                                >  SRR4302547.5763292/1‑94 (MQ=60)
                                               TCACCGGTGGTCTGCCGCGCGTTGCGGACCTGTTCGAAGCACGTCGCCCGAAAGAGCCGGCAATCCTGGCTGAAATCAGCGGTATCGTTTCCTT                                               <  SRR4302547.349224/94‑1 (MQ=60)
                                                CACCGGTGGTCTGCCGCGCGTTGCGGACCTGTTCGAAGCACGTCGTCCGAAAGAGCCGGCAATCCTGGCTGAAATCAGCGGTATCGTTTCCTTC                                              <  SRR4302547.4256701/94‑1 (MQ=60)
                                                CACCGGTGGTCTGCCGCGCGTTGCGGACCTGTTCGAAGCACGTCGTCCGAAAGAGCCGGCAATCCTGGCTGAAATCAGCGGTATCGTTTCCTTC                                              <  SRR4302547.5803118/94‑1 (MQ=60)
                                                CACCGGTGGTCTGCCGCGCGTTGCGGACCTGTTCGAAGCACGTCGCCCGAAAGAGCCGGCAATCCTGGCTGAAATCAGCGGTATCGTTTCCTTG                                              >  SRR4302547.6496544/1‑94 (MQ=60)
                                                CACCGGTGGTCTGCCGCGCGTTGCGGACCTGTTCGAAGCACGTCGCCCGAAAGAGCCGGCAATCCTGGCTGAAATCAGCGGTATCGTTTCCTTC                                              <  SRR4302547.5704285/94‑1 (MQ=60)
                                                 ACCGGTGGTCTGCCGCGCGTTGCGGACCTGTTCGAAGCACGTCGTCCGAAAGAGCCGGCAATCCTGGCTGAAATCAGCGGTATCGTTTCCTTCG                                             <  SRR4302547.4400014/94‑1 (MQ=60)
                                                 ACCGGTGGTCTGCCGCGCGTTGCGGACCTGTTCGAAGCACGTCGCCCGAAAGAGCCGGCAATCCTGGCTGAAATCAGCGGTATCGTTTCCTTCG                                             <  SRR4302547.526045/94‑1 (MQ=60)
                                                 ACCGGTGGTCTGCCGCGCGTTGCGGACCTGTTCGAAGCACGTCGCCCGAAAGAGCCGGCAATCCTGGCTGAAATCAGCGGTATCGTTTCCTTCG                                             <  SRR4302547.5291961/94‑1 (MQ=60)
                                                 ACCGGTGGTCTGCCGCGCGTTGCGGACCTGTTCGAAGCACGTCGCCCGAAAGAGCCGGCAATCCTGGCTGAAATCAGCGGTATCGTTTCCTTCG                                             >  SRR4302547.5851997/1‑94 (MQ=60)
                                                  CCGGTGGTCTGCCGCGCGTTGCGGACCTGTTCGAAGCACGTCGCCCGAAAGAGCCGGCAATCCTGGCTGAAATCAGCGGTATCGTTTCCTTCGG                                            >  SRR4302547.801919/1‑94 (MQ=60)
                                                  CCGGTGGTCTGCCGCGCGTTGCGGACCTGTTCGAAGCACGTCGCCCGAAAGAGCCGGCAATCCTGGCTGAAATCAGCGGTATCGTTTCCTTCGG                                            <  SRR4302547.4245327/94‑1 (MQ=60)
                                                   CGGTGGTCTGCCGCGCGTTGCGGACCTGTTCGAAGCACGTCGCCCGAAAGAGCCGGCAATCCTGGCTGAAATCAGCGGTATCGTTTGCTTCGGT                                           >  SRR4302547.5251228/1‑94 (MQ=60)
                                                   CGGTGGTCTGCCGCGCGTTGCGGACCTGTTCGAAGCACGTCGCCCGAAAGAGCCGGCAATCCTGGCTGAAATCAGCGGTATCGTTTCCTTCGGT                                           >  SRR4302547.1578616/1‑94 (MQ=60)
                                                       GGTCTGCCGCGCGTTGCGGACCTGTTCGAAGCACGTCGCCCGAAAGAGCCGGCAATCCTGGCTGAAATCAGCGGTATCGTTTCCTTCGGTAAAG                                       <  SRR4302547.2866197/94‑1 (MQ=60)
                                                        GTCTGCCGCGCGTTGCGGACCTGTTCGAAGCACGTCGCCCGAAAGAGCCGGCAATCCTGGCTGAAATCAGCGGTATCGTTTCCTTCGGTAAAGA                                      <  SRR4302547.2601580/94‑1 (MQ=60)
                                                         TCTGCCGCGCGTTGCGGACCTGTTCGAAGCACGTCGCCCGAAAGAGCCGGCAATCCTGGCTGAAATCAGCGGTATCGTTTCCTTCGGTAAAGAA                                     <  SRR4302547.4118176/94‑1 (MQ=60)
                                                           TGCCGCGCGTTGCGGACCTGTTCGAAGCACGTCGTCCGAAAGAGCCGGCAATCCTGGCTGAAATCAGCGGTATCGTTTCCTTCGGTAAAGAAAC                                   >  SRR4302547.2774760/1‑94 (MQ=60)
                                                           TGCCGCGCGTTGCGGACCTGTTCGAAGCACGTCGTCCGAAAGAGCCGGCAATCCTGGCTGAAATCAGCGGTATCGTTTCCTTCGGTAAAGAAAC                                   >  SRR4302547.4112131/1‑94 (MQ=60)
                                                           TGCCGCGCGTTGCGGACCTGTTCGAAGCACGTCGCCCGAAAGAGCCGGCAATCCTGGCTGAAATCAGCGGTATCGTTTCCTTCGGTAAAGAAAC                                   <  SRR4302547.5201480/94‑1 (MQ=60)
                                                           TGCCGCGCGTTGCGGACCTGTTCGAAGCACGTCGCCCGAAAGAGCCGGCAATCCTGGCTGAAATCAGCGGTATCGTTTCCTTCGGTAAAGAAAC                                   <  SRR4302547.6781549/94‑1 (MQ=60)
                                                           TGCCGCGCGTTGCGGACCTGTTCGAAGCACGTCGCCCGAAAGAGCCGGCAATCCTGGCTGAAATCAGCGGTATCGTTTCCTTCGGGAAAGAAAC                                   >  SRR4302547.6252507/1‑94 (MQ=60)
                                                            GCCGCGCGTTGCGGACCTGTTCGAAGCACGTCGCCCGAAAGAGCCGGCAATCCTGGCTGAAATCAGCGGTATCGTTTCCTTCGGTAAAGAAACC                                  >  SRR4302547.6738763/1‑94 (MQ=60)
                                                            GCCGCGCGTTGCGGACCTGTTCGAAGCACGTCGCCCGAAAGAGCCGGCAATCCTGGCTGAAATCAGCGGTATCGTTTCCTTCGGTAAAGAAACC                                  >  SRR4302547.2573720/1‑94 (MQ=60)
                                                             CCGCGCGTTGCGGACCTGTTCGAAGCACGTCGCCCGAAAGAGCCGGCAATCCTGGCTGAAATCAGCGGTATCGTTTCCTTCGGTAAAGAAACCA                                 >  SRR4302547.5647284/1‑94 (MQ=60)
                                                              CGCGCGTTGCGGACCTGTTCGAAGCACGTCGTCCGAAAGAGCCGGCAATCCTGGCTGAAATCAGCGGTATCGTTTCCTTCGGTAAAGAAACCAA                                >  SRR4302547.6332629/1‑94 (MQ=60)
                                                              CGCGCGTTGCGGACCTGTTCGAAGCACGTCGCCCGAAAGAGCCGGCAATCCTGGCTGAAATCAGCGGTATCGTTTCCTTCGGTAAAGAAACCAA                                >  SRR4302547.4247950/1‑94 (MQ=60)
                                                              CGCGCGTTGCGGACCTGTTCGAAGCACGTCGCCCGAAAGAGCCGGCAATCCTGGCTGAAATCAGCGGTATCGTTTCCTTCGGTAAAGAAACCAA                                >  SRR4302547.3892365/1‑94 (MQ=60)
                                                              CGCGCGTTGCGGACCTGTTCGAAGCACGTCGCCCGAAAGAGCCGGCAATCCTGGCTGAAATCAGCGGTATCGTTTCCTTCGGTAAAGAAACCAA                                <  SRR4302547.2246038/94‑1 (MQ=60)
                                                               GCGCGTTGCGGACCTGTTCGAAGCACGTCGTCCGAAAGAGCCGGCAATCCTGGCTGAAATCAGCGTTATCGTTTCCTTCGGTAAAGAAACCAAA                               <  SRR4302547.1509311/94‑1 (MQ=60)
                                                               GCGCGTTGCGGACCTGTTCGAAGCACGTCGCCCGAAAGAGCCGGCAATCCTGGCTGAAATCAGCGGTATCGTTTCCTTCGGTAAAGAAACCAAA                               <  SRR4302547.4094196/94‑1 (MQ=60)
                                                                CGCGTTGCGGACCTGTTCGAAGCACGTCTCCCGAAAGAGCCGGCAATCCTGGCTGAAATCAGCGGTATCGTTTCCTTCGGTAAAGAAACCAAAG                              <  SRR4302547.772575/94‑1 (MQ=60)
                                                                CGCGTTGCGGACCTGTTCGAAGCACGTCGCCCGAAAGAGCCGGCAATCCTGGCTGAAATCAGCGGTATCGTTTCCTTCGGTAAAGAAACCAAAG                              <  SRR4302547.2892002/94‑1 (MQ=60)
                                                                CGCGTTGCGGACCTGTTCGAAGCACGTCGCCCGAAAGAGCCGGCAATCCTGGCTGAAATCAGCGGTATCGTTTCCTTCGGTAAAGAAACCAAAG                              <  SRR4302547.5512807/94‑1 (MQ=60)
                                                                 GCGTTGCGGACCTGTTCGAAGCACGTCGCCCGAAAGAGCCGGCAATCCTGGCTGAAATCAGCGGTATCGTTTCCTTCGGTAAAGAAACCAAAGG                             >  SRR4302547.5400153/1‑94 (MQ=60)
                                                                 GCGTTGCGAACCTGTTCGAAGCACGTCGCCCGAAAGAGCCGGCAATCCTGGCTGAAATCAGCGGTATCGTTTCCTTCGGTAAAGTAACCAAAGG                             <  SRR4302547.6623640/94‑1 (MQ=60)
                                                                  CGTTGCGGACCTGTTCGAAGCACGTCGTCCGAAAGAGCCGGCAATCCTGGCTGAAATCAGCGGTATCGTTTCCTTCGGTAAAGAAACCAAAGGT                            <  SRR4302547.374079/94‑1 (MQ=60)
                                                                  CGTTGCGGACCTGTTCGAAGCACGTCGCCCGAAAGAGCCGGGAATCCTGGCTGAAATCAGCGGTATCGTTTCCTTCGGTAAAGGAACCAAAGGT                            >  SRR4302547.4005815/1‑94 (MQ=60)
                                                                  CGTTGCGGACCTGTTCGAAGCACGTCGCCCGAAAGAGCCGGCAATCCTGGCTGAAATCAGCGGTATCGTTTACTTCTGTAAAGAAACCAAAGGT                            >  SRR4302547.3607543/1‑94 (MQ=60)
                                                                   GTTGCGGACCTGTTCGAAGCACGTCGCCCGAAAGAGCCGGCAATCCTGGCTGAAATCAGCGGTATCGTTTCCTTCGGTAAAGAAACCAAAGGTA                           >  SRR4302547.5763377/1‑94 (MQ=60)
                                                                   GTTGCGGACCTGTTCGAAGCACGTCGCCCGAAAGAGCCGGCAATCCTGGCTGAAATCAGCGGTATCGTTTCCTTCGGTAAAGAAACCAAAGGTA                           <  SRR4302547.3861900/94‑1 (MQ=60)
                                                                   GTTGCGGACCTGTTCGAAGCACGTCGCCCGAAAGAGCCGGCAATCCTGGCTGAAATCAGCGGTATCGTTTCCTTCGGTAAAGAAACCAAAGGTA                           <  SRR4302547.6690836/94‑1 (MQ=60)
                                                                    TTGCGGACCTGTTCGAAGCACGTCGTCCGAAAGAGCCGGCAATCCTGGCTGAAATCAGCGGTATCGTTTCCTTCGGTAAAGAAACCAAAGGTAA                          <  SRR4302547.5670419/94‑1 (MQ=60)
                                                                      GCGGACCTGTTCGAAGCACGTCGCCCGAAAGAGCCGGCAATCCTGGCTGAAATCAGCGGTATCGTTTCCTTCGGTAAAGAAACCAAAGGTAAAC                        <  SRR4302547.5017211/94‑1 (MQ=60)
                                                                      GCGGACCTGTTCGAAGCACGTCGCCCGAAAGAGCCGGCAATCCTGGCTGAAATCAGCGGTATCGTTTCCTTCGGTAAAGAAACCAAAGGTAAAC                        <  SRR4302547.2675233/94‑1 (MQ=60)
                                                                      GCGGACCTGTTCGAAGCACGTCGCCCGAAAGAGCCGGCAATCCTGGCTGAAATCAGCGGTATCGTTTCCTTCGGTAAAGAAACCAAAGGTAAAC                        >  SRR4302547.4020415/1‑94 (MQ=60)
                                                                       CGGACCTGTTCGAAGCACGTCGTCCGAAAGAGCCGGCAATCCTGGCTGAAATCAGCGGTATCGTTTCCTTCGGTAAAGAAACCAAAGGTAAACG                       <  SRR4302547.920986/94‑1 (MQ=60)
                                                                       CGGACCTGTTCGAAGCACGTCGCCCGAAAGAGCCGGCAATCCTGGCTGAAATCAGCGGTATCGTTTCCTTCGGTAAAGAAACCAAAGGTAAACG                       <  SRR4302547.5202089/94‑1 (MQ=60)
                                                                       CGGACCTGTTCGAAGCACGTCGCCCGAAAGAGCCGGCAATCCTGGCTGAAATCAGCGGTATCGTTTCCTTCGGTAAAGAAACCAAAGGTAAACG                       <  SRR4302547.6308429/94‑1 (MQ=60)
                                                                        GGACCTGTTCGAAGCACGTCGCCCGAAAGAGCCGGCAATCCTGGCTGAAATCAGCGGTATCGTTTCCTTCGGTAAAGAAACCAAAGGTACACGT                      >  SRR4302547.3249819/1‑94 (MQ=60)
                                                                        GGACCTGTTCGAAGCACGTCGCCCGAAAGAGCCGGCAATCCTGGCTGAAATCAGCGGTATCGTTTCCTTCGGTAAAGAAACCAAAGGTAAACGT                      <  SRR4302547.539220/94‑1 (MQ=60)
                                                                        GGACCTGTTCGAAGCACGTCGCCCGAAAGAGCCGGCAATCCTGGCTGAAATCAGCGGTATCGTTTCCTTCGGTAAAGAAACCAAAGGTAAACGT                      <  SRR4302547.6291344/94‑1 (MQ=60)
                                                                        GGACCTGTTCGAAGCACGTCGCCCGAAAGAGCCGGCAATCCTGGCTGAAATCAGCGGTATCGTTTCCTTCGGTAAAGAAACCAAAGGTAAACGT                      <  SRR4302547.3102096/94‑1 (MQ=60)
                                                                         GACCTGTTCGAAGCACGTCGCCCGAAAGAGCCGGCAATCCTGGCTGAAATCAGCGGTATCGTTTCCTTCGGTAAAGAAACCAAAGGTAAACGTC                     <  SRR4302547.1657940/94‑1 (MQ=60)
                                                                          ACCTGTTCGAAGCACGTCGCCCGAAAGAGCCGGCAATCCTGGCTGAAATCAGCGGTATCGTTTCCTTCGGTAAAGAAACCAAAGGTAAACGTCG                    <  SRR4302547.1090840/94‑1 (MQ=60)
                                                                          ACCTGTTCGAAGCACGTCGCCCGAAAGAGCCGGCAATCCTGGCTGAAATCAGCGGTATCGTTTCCTTCGGTAAAGAAACCAAAGGTAAACGTCG                    <  SRR4302547.569987/94‑1 (MQ=60)
                                                                          ACCTGTTCGAAGCACGTCGCCCGAAAGAGCCGGCAATCCTGGCTGAAATCAGCGGTATCGTTTCCTTCGGTAAAGAAACCAAAGGTAAACGTCG                    >  SRR4302547.2096109/1‑94 (MQ=60)
                                                                          ACCTGTTCGAAGCACGTCGCCCGAAAGAGCCGGCAATCCTGGCTGAAATCAGCGGTATCGTTTCCTTCGGTAAAGAAACCAAAGGTAAACGTCG                    >  SRR4302547.2959196/1‑94 (MQ=60)
                                                                           CCTGTTCGAAGCACGTCGCCCGAAAGAGCCGGCAATCCTGGCTGAAATCAGCGGAATCGTTTCCTTCCGTAAAGAAACCAAAGGAAAACGTCGT                   >  SRR4302547.5009782/1‑94 (MQ=60)
                                                                            CTGTTCGAAGCACGTCGCCCGAAAGAGCCGGCAATCCTGGCTGAAATCAGCGGTATCGTTTCCTTCGGTAAAGAAACCAAAGGTAAACGTCGTC                  >  SRR4302547.5318833/1‑94 (MQ=60)
                                                                            CTGTTCGAAGCACGTCGCCCGAAAGAGCCGGCAATCCTGGCTGAAATCAGCGGTATCGTTTCCTTCGGTAAAGAAACCAAAGGTAAACGTCGTC                  <  SRR4302547.1126313/94‑1 (MQ=60)
                                                                            CTGTTCGAAGCACGTCGCCCGAAAGAGCCGGCAATCCTGGCTGAAATCAGCGGTATCGTTTCCTTCGGTAAAGAAACCAAAGGTAAACGTCGTC                  >  SRR4302547.2812647/1‑94 (MQ=60)
                                                                            CTGTTCGAAGCACGTCGCCCGAAAGAGCCGGCAATCCTGGCTGAAATCAGCGGTATCGTTTCCTTCGGTAAAGAAACCAAAGGTAAACGTCGTC                  <  SRR4302547.6417880/94‑1 (MQ=60)
                                                                            CTGTTCGAAGCACGTCGCCCGAAAGAGCCGGCAATCCTGGCTGAAATCAGCGGTATCGTTTCCTTCGGTAAAGAAACCAAAGGTAAACGTCGTC                  >  SRR4302547.4293179/1‑94 (MQ=60)
                                                                               TTCGAAGCACGTCGCCCGAAAGAGCCGGCAATCCTGGCTGAAATCAGCGGTATCGTTTCCTTCGGTAAAGAAACCAAAGGTAAACGTCGTCTGG               <  SRR4302547.3304193/94‑1 (MQ=60)
                                                                               TTCGAAGCACGTCGCCCGAAAGAGCCGGCAATCCTGGCTGAAATCAGCGGTATCGTTTCCTTCGGTAAAGAAACCAAAGGTAAACGTCGTCTGG               <  SRR4302547.3444749/94‑1 (MQ=60)
                                                                                TCGAAGCACGTCGTCCGAAAGAGCCGGCAATCCTGGCTGAAATCAGCGGTATCGTTTCCTTCGGTAAAGAAACCAAAGGTAAACGTCGTCTGGT              <  SRR4302547.5934660/94‑1 (MQ=60)
                                                                                TCGAAGCACGTCGCCCGAAAGAGCCGGCAATCCTGGCTGAAATCAGCGGTATCGTTTCCTTCGGTAAAGAAACCAAAGGTAAACGTCGTCTGGT              <  SRR4302547.1039728/94‑1 (MQ=60)
                                                                                 CGAAGCACGTCGCCCGAAAGAGCCGGCAATCCTGGCTGAAATCAGCGGTATCGTTTCCTTCGGTAAAGAAACCAAAGGTAAACGTCGTCTGGTT             <  SRR4302547.3964098/94‑1 (MQ=60)
                                                                                  GAAGCACGTCGCCCGAAAGAGCCGGCAATCCTGGCTGAAATCAGCGGTATCGTTTCCTTCGGTAAAGAAACCAAAGGTAAACGTCGTCTGGTTA            >  SRR4302547.3151313/1‑94 (MQ=60)
                                                                                   AAGCACGTCGTCCGAAAGAGCCGGCAATCCTGGCTGAAATCAGCGGTATCGTTTCCTTCGGTAAAGAAACCAAAGGTAAACGTCGTCTGGTTAT           >  SRR4302547.53005/1‑94 (MQ=60)
                                                                                   AAGCACGTCGCCCGAAAGAGCCGGCAATCCTGGCTGAAATCAGCGGTATCGTTTCCTTCGGTAAAGAAACCAAAGGTAAACGTCGTCTGGTTAT           <  SRR4302547.3876841/94‑1 (MQ=60)
                                                                                    AGCACTTCGCCCGAAAGAGCCGGCAATCCTGGCTGAAATCAGCTGTATCGTTTCCTTCGGTAAAGAAACCAAAGGTAATCGTCGTCTGGTTATC          <  SRR4302547.1569533/94‑1 (MQ=60)
                                                                                     GCACGTCGTCCGAAAGAGCCGGCAATCCTGGCTGAAATCAGCGGTATCGTTTCCTTCGGTAAAGAAACCAAAGGTAAACGTCGTCTGGTTATCA         >  SRR4302547.1300128/1‑94 (MQ=60)
                                                                                     GCACGTCGCCCGAAAGAGCCGGCAATCCTGGCTGAAATCAGCGGTATCGTTTCCTTCGGTAAAGAAACCAAAGGTAAACGTCGTCTGGTTATCA         <  SRR4302547.6558910/94‑1 (MQ=60)
                                                                                      CACGTCGTCCGAAAGAGCCGGCAATCCTGGCTGAAATCAGCGGTATCGTTTCCTTCGGTAAAGAAACCAAAGGTAAACGTCGTCTGGTTATCAC        >  SRR4302547.311041/1‑94 (MQ=60)
                                                                                      CACGTCGCCCGAAAGAGCCGGCAATCCTGGCTGAAATCAGCGGTATCGTTTCCTTCGGTAAAGAAACCAAAGGTAAACGTCGTCTGGTTATCAC        >  SRR4302547.5197552/1‑94 (MQ=60)
                                                                                      CACGTCGCCCGAAAGAGCCGGCAATCCTGGCTGAAATCAGCGGTATCGTTTCCTTCGGTAAAGAAACCAAAGGTAAACGTCGTCTGGTTATCAC        <  SRR4302547.6226993/94‑1 (MQ=60)
                                                                                       ACGTCGTCCGAAAGAGCCGGCAATCCTGGCTGAAATCAGCGGTATCGTTTCCTTCGGTAAAGAAACCAAAGGTAAACGTCGTCTGGTTATCACC       >  SRR4302547.1927666/1‑94 (MQ=60)
                                                                                        CGTCGCCCGAAAGAGCCGGCAATCCTGGCTGAAATCAGCGGTATCGTTTTCTTCGGTAAAGAAACCAAAGGTAAACGTCGTCTGGTTATCACCC      >  SRR4302547.2927975/1‑94 (MQ=60)
                                                                                         GTCGTCCGAAAGAGCCGGCAATCCTGGCTGAAATCAGCGGTATCGTTTCCTTCGGTAAAGAAACCAAAGGTAAACGTCGTCTGGTTATCACCCC     >  SRR4302547.4566557/1‑94 (MQ=60)
                                                                                         GTCGTCCGAAAGAGCCGGCAATCCTGGCTGAAATCAGCGGTATCGTTTCCTTCGGTAAAGAAACCAAAGGTAAACGTCGTCTGGTTATCACCCC     >  SRR4302547.2671679/1‑94 (MQ=60)
                                                                                         GTCGCCCGAAAGAGCCGGCAATCCTGGCTGAAATCAGCGGTATCGTTTCCTTCGGTAAAGAAACCAAAGGTAAACGTCGTCTGGTTATCACCCC     <  SRR4302547.2846894/94‑1 (MQ=60)
                                                                                         GTCGCCCGAAAGAGCCGGCAATCCTGGCTGAAATCAGCGGTATCGTTTCCTTCGGTAAAGAAACCAAAGGTAAACGTCGTCTGGTTATCACCCC     <  SRR4302547.3912842/94‑1 (MQ=60)
                                                                                           CGTCCGAAAGAGCCGGCAATCCTGGCTGAAATCAGCGGTATCGTTTCCTTCGGTAAAGAAACCAAAGGTAAACGTCGTCTGGTTATCACCCCGG   >  SRR4302547.1593210/1‑94 (MQ=60)
                                                                                           CGCCCGAAAGAGCCGGCAATCCTGGCTGAAATCAGCGGTATCGTTTCCTTCGGTAAAGAAACCAAAGGTAAACGTCGTCTGGTTATCACCCCGG   >  SRR4302547.1721063/1‑94 (MQ=60)
                                                                                            GCCCGAAAGAGCCGGCAATCCTGGCTGAAATCAGCGGTATCGTTTCCTTCGGTAAAGAAACCAAAGGTAAACGTCGTCTGGTTATCACCCCGGT  >  SRR4302547.4926352/1‑94 (MQ=60)
                                                                                            GCCCGAAAGAGCCGGCAATCCTGGCTGAAATCAGCGGTATCGTTTCCTTCGGTAAAGAAACCAAAGGTAAACGTCGTCTGGTTATCACCCCGGT  <  SRR4302547.5198255/94‑1 (MQ=60)
                                                                                             |                                                                                            
TGACACCCTGGCGCGTATTCCGCAGGAATCCGGCGGTACCAAGGACATCACCGGTGGTCTGCCGCGCGTTGCGGACCTGTTCGAAGCACGTCGTCCGAAAGAGCCGGCAATCCTGGCTGAAATCAGCGGTATCGTTTCCTTCGGTAAAGAAACCAAAGGTAAACGTCGTCTGGTTATCACCCCGGT  >  NC_000913/4186281‑4186466

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑