Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I2 R1 593 264.2 13311096 97.8% 13018251 93.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 4,307,521 G→A R347C (CGC→TGC)  yjcW ← putative ATP‑binding component of a transport system

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009134,307,5210GA84.4% 787.3 / 105.0 282R347C (CGC→TGC) yjcWputative ATP‑binding component of a transport system
Reads supporting (aligned to +/- strand):  ref base G (27/17);  new base A (109/129);  total (136/146)
Fisher's exact test for biased strand distribution p-value = 7.08e-02
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.90e-01

Only 100 of 291 total aligned reads displayed.

GCGCCTTTATAGCCGCCGTCTTTCAGACTGCGGCTGATCGCCATGTTCTGAGCGATGGAAAAGTTGGGGAAAAAACCGTTATCCCGGCGGCTTTCAGTGATGTAAGCCATCCCTTTTTTCACGGCATCCAGGGGTGAACGTGGAGAGATATCTTTGCCATTAAGACGGATTTCTCCGCCA  >  NC_000913/4307433‑4307612
                                                                                        |                                                                                           
gcgcCTTTATAGCCGCCGTCTTTCAGACTGCGGCTGATCGCCATGTTCTGAGCGATGGAAAAGTTGGGGAAAAAACCGTTATCCCGGCAGCtt                                                                                         >  1:4409930/1‑93 (MQ=255)
 cgcCTTTATAGCCGCCGTCTTTCAGACTGCGGCTGATCGCCATGTTCTGAGCGATGGAAAAGTTGGGGAAAAAACCGTTATCCCGGCAGCttt                                                                                        <  2:2441463/93‑1 (MQ=255)
   ccTTTATAGCCGCCGTCTTTCAGACTGCGGCTGATCGCCATGTTCTGAGCGATGGGAAAGTTGGGGAAAAAACCGTTATCCCGGCAGCTTTCa                                                                                      >  1:619372/1‑93 (MQ=255)
   ccTTTATAGCCGCCGTCTTTCAGACTGCGGCTGATCGCCATGTTCTGAGCGATGGAAAAGTTGGGGAAAAAACCGTTATCCCGGCGGCTTTCa                                                                                      <  1:892430/93‑1 (MQ=255)
   ccTTTATAGCCGCCGTCTTTCAGACTGCGGCTGATCGCCATGTTCTGAGCGATGGAAAAGTTGGGGAAAAAACCGTTATCCCGGCAGCTTTCa                                                                                      >  1:5474071/1‑93 (MQ=255)
    cTTTATAGCCGCCGTCTTTCAGACTGCGGCTGATCGCCATGTTCTGAGCGATGGAAAAGTTGGGGAAAAAACCGTTATCCCGGCAGCTTTCAg                                                                                     <  2:5312457/93‑1 (MQ=255)
    cTTTATAGCCGCCGTCTTTCAGACTGCGGCTGATCGCCATGTTCTGAGCGATGGAAAAGTTGGGGAAAAAACCGTTATCCCGGCAGCTTTCAg                                                                                     >  1:4254193/1‑93 (MQ=255)
     tttATAGCCGCCGTCTTTCAGACTGCGGCTGATCGCCATGTTCTGAGCGATGGAAAAGTTGGGGAAAAAACCGTTATCCCGGCAGCTTTCAGt                                                                                    <  2:5731175/93‑1 (MQ=255)
       tataGCCGCCGTCTTTCAGACTGCGGCTGATCGCCATGTTCTGAGCGATGGAAAAGTTGGGGAAAAAACCGTTATCCCGGCGGCTTTCAGTGa                                                                                  >  2:3184443/1‑93 (MQ=255)
        ataGCCGCCGTCTTTCAGACTGCGGCTGATCGCCATGTTCTGAGCGATGGAAAAGTTGGGGAAAAAACCGTTATCCCGGCAGCTTTCAGTGAt                                                                                 >  1:420316/1‑93 (MQ=255)
         taGCCGCCGTCTTTCAGACTGCGGCTGATCGCCATGTTCTGCGCGATCGCAAAGTTGGGGAAAAAACCGTTATCCCGGCAGCTTTCAGTGATg                                                                                >  1:4997794/1‑93 (MQ=255)
             cgccgTCTTTCAGACTGCGGCTGATCGCCATGTTCTGAGCGATGGAAAAGTTGGGGAAAAAACCGTTATCCCGGCAGCTTTCAGTGATGTAAg                                                                            <  2:2159108/93‑1 (MQ=255)
             cgccgTCTTTCAGACTGCGGCTGATCGCCATGTTCTGAGCGATGGAAAAGTTGGGGAAAAAACCGTTATCCCGGCAGCTTTCAGTGATGTAAg                                                                            <  1:3894960/93‑1 (MQ=255)
               ccgTCTTTCAGACTGCGGCTGATCGCCATGTTCTGAGCGATGGAAAAGTTGGGGAAAAAACCGTTATCCCGGCGGCTTTCAGTGATGTAAGcc                                                                          >  2:2270746/1‑93 (MQ=255)
               ccgTCTTTCAGACTGCGGCTGATCGCCATGTTCTGAGCGATGGAAAAGTTGGGGAAAAAACCGTTATCCCGGCGGCTTTCAGTGATGTAAGcc                                                                          >  2:4835729/1‑93 (MQ=255)
               ccgTCTTTCAGACTGCGGCTGATCGCCATGTTCTGAGCGATGGAAAAGTTGGGGAAAAAACCGTTATCCCGGCAGCTTTCAGTGATGTAAGcc                                                                          <  2:1798891/93‑1 (MQ=255)
               ccgTCTTTCAGACTGCGGCTGATCGCCATGTTCTGAGCGATGGAAAAGTTGGGGAAAAAACCGTTATCCCGGCAGCTTTCAGTGATGTAAGcc                                                                          >  2:5583389/1‑93 (MQ=255)
                 gTCTTTCAGACTGCGGCTGATCGCCATGTTCTGAGCGATGGAAAAGTTGGGGAAAAAACCGTTATCCCGGCAGCTTTCAGTGATGTAAGCCAt                                                                        <  2:1693535/93‑1 (MQ=255)
                 gTCTTTCAGACTGCGGCTGATCGCCATGTTCTGAGCGATGGAAAAGTTGGGGAAAAAACCGTTATCCCGGCAGCTTTCAGTGATGTAAGCCAt                                                                        >  1:2609525/1‑93 (MQ=255)
                  tCTTTCAGACTGCGGCTGATCGCCATGTTCTGAGCGATGGAAAAGTTGGGGAAAAAACCGTTATCCCGGCGGCTTTCAGTGATGTAAGCCATc                                                                       >  2:328744/1‑93 (MQ=255)
                  tCTTTCAGACTGCGGCTGATCGCCATGTTCTGAGCGATGGAAAAGTTGGGGAAAAAACCGTTATCCCGGCAGCTTTCAGTGATGTAAGCCATc                                                                       >  1:1182146/1‑93 (MQ=255)
                   cTTTCAGACTGCGGCTGATCGCCATGTTCTGAGCGATGGAAAAGTTGGGGAAAAAACCGTTATCCCGGCGGCTTTCAGTGATGTAAGCCATcc                                                                      >  2:6058695/1‑93 (MQ=255)
                    tttCAGACTGCGGCTGATCGCCATGTTCTGAGCGATGGAAAAGTTGGGGAAAAAACCGTTATCCCGGCGGCTTTCAGTGATGTAAGCCATccc                                                                     >  2:6438139/1‑93 (MQ=255)
                    tttCAGACTGCGGCTGATCGCCATGTTCTGAGCGATGGAAAAGTTGGGGAAAAAACCGTTATCCCGGCAGCTTTCAGTGATGTAAGCCATccc                                                                     <  1:970299/93‑1 (MQ=255)
                     ttCAGACTGCGGCTGATCGCCATGTTCTGAGCGATGGAAAAGTTGGGGAAAAAACCGTTATCCCGGCAGCTTTCAGTGATGTAAGCCATCCCt                                                                    <  1:3639723/93‑1 (MQ=255)
                     ttCAGACTGCGGCTGATCGCCATGTTCTGAGCGATGGAAAAGTTGGGGAAAAAACCGTTATCCCGGCAGCTTTCAGTGATGTAAGCCATCCCt                                                                    <  1:157785/93‑1 (MQ=255)
                      tCAGACTGCGGCTGATCGCCATGTTCTGAGCGATGGAAAAGTTGGGGAAAAAACCGTTATCCCGGCAGCTTTCAGTGATGTAAGCCATCCCtt                                                                   <  1:3873450/93‑1 (MQ=255)
                       cAGACTGCGGCTGATCGCCATGTTCTGAGCGATGGAAAAGTTGGGGAAAAAACCGTTATCCCGGCAGCTTTCAGTGATGTAAGCCATCCCttt                                                                  <  2:3834861/93‑1 (MQ=255)
                       cAGACTGCGGCTGATCGCCATGTTCTGAGCGATGGAAAAGTTGGGGAAAAAACCGTTATCCCGGCAGCTTTCAGTGATGTAAGCCATCCCttt                                                                  >  2:285438/1‑93 (MQ=255)
                        aGACTGCGGCTGATCGCCATGTTCTGAGCGATGGAAAAGTTGGGGAAAAAACCGTTATCCCGGCAGCTTTCAGTGATGTAATCCATCCCtttt                                                                 >  1:1295822/1‑93 (MQ=255)
                         gACTGCGGCTGATCGCCATGTTCTGAGCGATGGAAAAGTTGGGGAAAAAACCGTTATCCCGGCAGCTTTCAGTGATGTAAGCCATCCCttttt                                                                <  1:2667600/93‑1 (MQ=255)
                          aCTGCGGCTGATCGCCATGTTCTGAGCGATGGAAAAGTTGGGGAAAAAACCGTTATCCCGGCAGCTTTCAGTGATGTAAGCCATCCCtttttt                                                               <  2:2494863/93‑1 (MQ=255)
                                 cTGATCGCCATGTTCTGAGCGATGGAAAAGTTGGGGAAAAAACCGTTATCCCGGCGGCTTTCAGTGATGTAAGCCATCCCTTTTTTCACGGCa                                                        <  2:6382492/93‑1 (MQ=255)
                                  tGATCGCCATGTTCTGAGCGATGGAAAAGTTGGGGAAAAAACCGTTATCCCGGCAGCTTTCAGTGATGTAAGCCATCCCTTTTTTCACGGCAt                                                       >  1:152401/1‑93 (MQ=255)
                                   gATCGCCATGTTCTGAGCGATGGAAAAGTTGGGGAAAAAACCGTTATCCCGGCAGCTTTCAGTGATGTAAGCCATCCCTTTTTTCACGGCATc                                                      >  2:3257652/1‑93 (MQ=255)
                                    aTCGCCATGTTCTGAGCGATGGAAAAGTTGGGGAAAAAACCGTTATCCCGGCAGCTTTCAGTGATGTAAGCCATCCCTTTTTTCACGGCATcc                                                     <  1:3069019/93‑1 (MQ=255)
                                     tCGCCATGTTCTGAGCGATGGAAAAGTTGGGGAAAAAACCGTTATCCCGGCAGCTTTCAGTGATGTAAGCCATCCCTTTTTTCACGGCATCCa                                                    <  1:4945465/93‑1 (MQ=255)
                                      cGCCATGTTCTGAGCGATGGAAAAGTTGGGGAAAAAACCGTTATCCCGGCGGCTTTCAGTGATGTAAGCCATCCCTTTTTTCACGGCATCCAg                                                   >  2:462064/1‑93 (MQ=255)
                                       gCCATGTTCTGAGCGATGGAAAAGTTGGGGAAAAAACCGTTATCCCGGCAGCTTTCAGTGATGTAAGCCATCCCTTTTTTCACGGCATCCAgg                                                  <  1:300578/93‑1 (MQ=255)
                                        ccATGTTCTGAGCGATGGAAAAGTTGGGGAAAAAACCGTTATCCCGGCAGCTTTCAGTGATGTAAGCCATCCCTTTTTTCACGGCATCCAggg                                                 >  2:393215/1‑93 (MQ=255)
                                        ccATGTTCTGAGCGATGGAAAAGTTGGGGAAAAAACCGTTATCCCGGCAGCTTTCAGTGATGTAAGCCATCCCTTTTTTCACGGCATCCAggg                                                 >  1:4014355/1‑93 (MQ=255)
                                        ccATGTTCTGAGCGATGGAAAAGTTGGGGAAAAAACCGTTATCCCGGCAGCTTTCAGTGATGTAAGCCATCCCTTTTTTCACGGCATCCAggg                                                 <  1:6276332/93‑1 (MQ=255)
                                        ccATGTTCTGAGCGATGGAAAAGTTGGGGAAAAAACCGTTATCCCGGCAGCTTTCAGTGATGTAAGCCATCCCTTTTTTCACGGCATCCAggg                                                 >  1:3043055/1‑93 (MQ=255)
                                         cATGTTCTGAGCGATGGAAAAGTTGGGGAAAAAACCGTTATCCCGGCAGCTTTCAGTGATGTAAGCCATCCCTTTTTTCACGGCATCCAgggg                                                <  2:4974904/93‑1 (MQ=255)
                                           tGTTCTGAGCGATGGAAAAGTTGGGGAAAAAACCGTTATCCCGGCAGCTTTCAGTGATGTAAGCCATCCCTTTTTTCACGGCATCCAGGGGTg                                              >  1:5695748/1‑93 (MQ=255)
                                           tGTTCTGAGCGATGGAAAAGTTGGGGAAAAAACCGTTATCCCGGCAGCTTTCAGTGATGTAAGCCATCCCTTTTTTCACGGCATCCAGGGGTg                                              >  2:3380950/1‑93 (MQ=255)
                                           tGTTCTGAGCGATGGAAAAGTTGGGGAAAAAACCGTTATCCCGGCAGCTTTCAGTGATGTAAGCCATCCCTTTTTTCACGGCATCCAGGGGTg                                              <  1:5211429/93‑1 (MQ=255)
                                            gTTCTGAGCGATGGAAAAGTTGGGGAAAAAACCGTTATCCCGGCAGCTTTCAGTGATGTAAGCCATCCCTTTTTTCACGGCATCCAGGGGTGa                                             <  2:1530423/93‑1 (MQ=255)
                                             ttCTGAGCGATGGAAAAGTTGGGGAAAAAACCGTTATCCCGGCAGCTTTCAGTGATGTAAGCCATCCCTTTTTTCACGGCATCCAGGGGTGaa                                            <  1:2118721/93‑1 (MQ=255)
                                             ttCTGAGCGATGGAAAAGTTGGGGAAAAAACCGTTATCCCGGCAGCTTTCAGTGATGTAAGCCATCCCTTTTTTCACGGCATCCAGGGGTGaa                                            <  1:36491/93‑1 (MQ=255)
                                              tCTGAGCGCTGGAAAAGTTGGGGAAAAAACCGTTATCCCGGCAGCTTTCAGTGATGTAAGCCATCCCTTTTTTCACGGCATCCAGGGGTGAAc                                           >  1:6496314/1‑93 (MQ=255)
                                              tCTGAGCGATGGAAAAGTTGGGGAAAAAACCGTTATCCCGGCGGCTTTCAGTGATGTAAGCCATCCCTTTTTTCACGGCATCCAGGGGTGAAc                                           >  2:6127029/1‑93 (MQ=255)
                                               cTGAGCGATGGAAAAGTTGGGGAAAAAACCGTTATCCCGGCAGCTTTCAGTGATGTAAGCCATCCCTTTTTTCACGGCATCCAGGGGTGAACg                                          >  2:6592419/1‑93 (MQ=255)
                                                tGAGCGATGGAAAAGTTGGGGAAAAAACCGTTATCCCGGCAGCTTTCAGTGATGTAAGCCATCCCTTTTTTCACGTCATCCAGGGGTGAACGt                                         >  2:5856564/1‑93 (MQ=255)
                                                tGAGCGATGGAAAAGTTGGGGAAAAAACCGTTATCCCGGCAGCTTTCAGTGATGTAAGCCATCCCTTTTTTCACGGCATCCAGGGGTGAACGt                                         <  2:4044019/93‑1 (MQ=255)
                                                tGAGCGATGGAAAAGTTGGGGAAAAAACCGTTATCCCGGCAGCTTTCAGTGATGTAAGCCATCCCTTTTTTCACGGCATCCAGGGGTGAACGt                                         <  2:5674776/93‑1 (MQ=255)
                                                 gAGCGATGGAAAAGTTGGGGAAAAAACCGTTATCCCGGCAGCTTTCAGTGATGTAAGCCATCCCTTTTTTCACGGCATCCAGGGGTGAACGTg                                        >  2:1256853/1‑93 (MQ=255)
                                                  aGCGATGGAAAAGTTGGGGAAAAAACCGTTATCCCGGCAGCTTTCAGTGATGTAAGCCATCCCTTTTTTCACGGCATCCAGGGGTGAACGTgg                                       <  2:1353850/93‑1 (MQ=255)
                                                   gCGATGGAAAAGTTGGGGAAAAAACCGTTATCCCGGCAGCTTTCAGTGATGTAAGCCATCCCTTTTTTCACGGCATCCAGGGGTGAACGTGga                                      >  1:1089208/1‑93 (MQ=255)
                                                   gCGATGGAAAAGTTGGGGAAAAAACCGTTATCCCGGCAGCTTTCAGTGATGTAAGCCATCCCTTTTTTCACGGCATCCAGGGGTGAACGTGga                                      <  2:886352/93‑1 (MQ=255)
                                                   gCGATGGAAAAGTTGGGGAAAAAACCGTTATCCCGGCAGCTTTCAGTGATGTAAGCCATCCCTTTTTTCACGGCATCCAGGGGTGAACGTGga                                      >  1:5366149/1‑93 (MQ=255)
                                                     gATGGAAAAGTTGGGGAAAAAACCGTTATCCCGGCGGCTTTCAGTGATGTAAGCCATCCCTTTTTTCACGGCATCCAGGGGTGAACGTGgaga                                    >  1:2360434/1‑93 (MQ=255)
                                                     gATGGAAAAGTTGGGGAAAAAACCGTTATCCCGGCAGCTTTCAGTGATGTAAGCCATCCCTTTTTTCACGGCATCCAGGGGTGAACGTGgagg                                    >  2:1014859/1‑92 (MQ=255)
                                                         gAAAAGTTGGGGAAAAAACCGTTATCCCGGCAGCTTTCAGTGATGTAAGCCATCCCTTTTTTCACGGCATCCAGGGGTGAACGTGGAGAGata                                <  2:544771/93‑1 (MQ=255)
                                                         gAAAAGTTGGGGAAAAAACCGTTATCCCGGCAGCTTTCAGTGATGTAAGCCATCCCTTTTTTCACGGCATCCAGGGGTGAACGTGGAGAGata                                >  1:2866140/1‑93 (MQ=255)
                                                         gAAAAGTTGGGGAAAAAACCGTTATCCCGGCAGCTTTCAGTGATGTAAGCCATCCCTTTTTTCACGGCATCCAGGGGTGAACGTGGAGAGata                                >  1:5976865/1‑93 (MQ=255)
                                                          aaaaGTTGGGGAAAAAACCGTTATCCCGGCAGCTTTCAGTGATGTAAGCCATCCCTTTTTTCACGGCATCCAGGGGTGAACGTGGAGAGatat                               >  2:5176075/1‑93 (MQ=255)
                                                            aaGTTGGGGAAAAAACCGTTATCCCGGCAGCTTTCAGTGATGTAAGCCATCCCTTTTTTCACGGCATCCAGGGGTGAACGTGGAGAGATATCt                             >  2:2766040/1‑93 (MQ=255)
                                                             aGTTGGGGAAAAAACCGTTATCCCGGCAGCTTTCAGTGATGTAAGCCATCCCTTTTTTCACGGCATCCAGGGGTGAACGTGGAGAGATATCtt                            <  2:3092215/93‑1 (MQ=255)
                                                                tGGGGAAAAAACCGTTATCCCGGCGGCTTTCAGTGATGTAAGCCATCCCTTTTTTCACGGCATCCAGGGGTGAACGTGGAGAGATATCTTTGc                         >  1:6365329/1‑93 (MQ=255)
                                                                 ggggAAAAAACCGTTATCCCGGCAGCTTTCAGTGATGTAAGCCATCCCTTTTTTCACGGCATCCAGGGGTGAACGTGGAGAGATATCTTTGcc                        >  1:20846/1‑93 (MQ=255)
                                                                    gAAAAAACCGTTATCCCGGCAGCTTTCAGTGATGTAAGCCATCCCTTTTTTCACGGCATCCAGGGGTGAACGTGGAGAGATATCTTTGCCAtt                     <  2:4483990/93‑1 (MQ=255)
                                                                     aaaaaaCCGTTATCCCGGCAGCTTTCAGTGATGTAAGCCATCCCTTTTTTCACGGCATCCAGGGGTGAACGTGGAGAGATATCTTTGCCATTa                    <  1:228213/93‑1 (MQ=255)
                                                                     aaaaaaCCGTTATCCCGGCAGCTTTCAGTGATGTAAGCCATCCCTTTTTTCACGGCATCCAGGGGTGAACGTGGAGAGATATCTTTGCCATTa                    <  1:1730593/93‑1 (MQ=255)
                                                                      aaaaaCCGTTATCCCGGCAGCTTTCAGTGATGTAAGCCATCCCTTTTTTCACGGCATCCAGGGGTGAACGTGGAGAGATATCTTTGCCATTaa                   <  2:3577535/93‑1 (MQ=255)
                                                                      aaaaaCCGTTATCCCGGCAGCTTTCAGTGATGTAAGCCATCCCTTTTTTCACGGCATCCAGGGGTGAACGTGGAGAGATATCTTTGCCATTaa                   <  2:4153773/93‑1 (MQ=255)
                                                                      aaaaaCCGTTATCCCGGCAGCTTTCAGTGATGTAAGCCATCCCTTTTTTCACGGCATCCAGGGGTGAACGTGGAGAGATATCTTTGCCATTaa                   <  2:5493190/93‑1 (MQ=255)
                                                                        aaaCCGTTATCCCGGCAGCTTTTAGTGATGTAAGCCATCCCTTTTTTCACGGCATCCAGGGGTGAACGTGGAGAGATATCTTTGCCATTAAGa                 >  2:3471962/1‑93 (MQ=255)
                                                                        aaaCCGTTATCCCGGCAGCTTTCAGTGATGTAAGCCATCCCTTTTTTCACGGCATCCAGGGGTGAACGTGGAGAGATATCTTTGCCATTAAGa                 >  1:2002236/1‑93 (MQ=255)
                                                                         aaCCGTTATCCCGGCAGCTTTCAGTGATGTAAGCCATCCCTTTTTTCACGGCATCCAGGGGTGAACGTGGAGAGATATCTTTGCCATTAAGAc                <  2:373779/93‑1 (MQ=255)
                                                                         aaCCGTTATCCCGGCAGCTTTCAGTGATGTAAGCCATCCCTTTTTTCACGGCATCCAGGGGTGAACGTGGAGAGATATCTTTGCCATTAAGAc                >  1:5796673/1‑93 (MQ=255)
                                                                         aaCCGTTATCCCGGCAGCTTTCAGTGATGGAAGCCATCCCTTTTTTCACGGCATCCAGGGGTGAACGTGGAGAGATATCTTTGCCATTAAGAc                >  1:6422703/1‑93 (MQ=255)
                                                                          aCCGTTATCCCGGCAGCTTTCAGTGATGTAAGCCATCCCTTTTTTCACGGCATCCAGGGGTGAACGTGGAGAGATATCTTTGCCATTAAGACg               >  2:246080/1‑93 (MQ=255)
                                                                          aCCGTTATCCCGGCAGCTTTCAGTGATGTAAGCCATCCCTTTTTTCACGGCATCCAGGGGTGAACGTGGAGAGATATCTTTGCCATTAAGACg               <  1:757399/93‑1 (MQ=255)
                                                                          aCCGTTATCCCGGCAGCTTTCAGTGATGTAAGCCATCCCTTTTTTCACGGCATCCAGGGGCGAACCTGCAGAGATATCTTTGCCATTAAGCCg               >  1:3304178/1‑93 (MQ=255)
                                                                           ccGTTATCCCGGCAGCTTTCAGTGATGTAAGCCATCCCTTTTTTCACGGCATCCAGGGGTGAACGTGGAGAGATATCTTTGCCATTAAGACgg              <  1:4605501/93‑1 (MQ=255)
                                                                           ccGTTATCCCGGCAGCTTTCAGTGATGTAAGCCATCCCTTTTTTCACGGCATCCAGGGGTGAACGTGGAGAGATATCTTTGCCATTAAGACgg              >  1:1976616/1‑93 (MQ=255)
                                                                            cGTTATCCCGGCAGCTTTCAGTGATGTAAGCCATCCCTTTTTTCACGGCATCCAGGGGTGAACGTGGAGAGATATCTTTGCCATTAAGACGGa             <  1:3480015/93‑1 (MQ=255)
                                                                             gTTATCCCGGCAGCTTTCAGTGATGTAAGCCATCCCTTTTTTCACGGCATCCAGGGGTGAACGTGGAGAGATATATTTGCCATTAAGACGGAt            >  2:4901997/1‑93 (MQ=255)
                                                                              ttATCCCGGCAGCTTTCAGTGATGTAAGCCATCCCTTTTTTCACGGCATCCAGGGGTGAACGTGGAGAGATATCTTTGCCATTAAGACGGAtt           <  1:545028/93‑1 (MQ=255)
                                                                              ttATCCCGGCAGCTTTCAGTGATGTAAGCCATCCCTTTTTTCACGGCATCCAGGGGTGAACGTGGAGAGATATCTTTGCCATTAAGACGGAtt           <  2:4366678/93‑1 (MQ=255)
                                                                              ttATCCCGGCAGCTTTCAGTGATGTAAGCCATCCCTTTTTTCACGGCATCCAGGGGTGAACGTGGAGAGATATCTTTGCCATTAAGACGGAtt           <  1:6580011/93‑1 (MQ=255)
                                                                               tATCCCGGCAGCTTTCAGTGATGTAAGCCATCCCTTTTTTCACGGCATCCAGGGGTGAACGTGGAGAGATATCTTTGCCATTAAGACGGAttt          <  2:2565061/93‑1 (MQ=255)
                                                                                aTCCCGGCAGCTTTCAGTGATGTAAGCCATCCCTTTTTTCACGGCATCCAGGGGTGAACGTGGAGAGATATCTTTGCCATTAAGACGGATTtc         >  2:6207086/1‑93 (MQ=255)
                                                                                aTCCCGGCAGCTTTCAGTGATGTAAGCCATCCCTTTTTTCACGGCATCCAGGGGTGAACGTGGAGAGATATCTTTGCCATTAAGACGGATTtc         >  2:6273601/1‑93 (MQ=255)
                                                                                aTCCCGGCAGCTTTCAGTGATGTAAGCCATCCCTTTTTTCACGGCATCCAGGGGTGAACGTGGAGAGATATCTTTGCCATTAAGACGGATTtc         >  1:5529362/1‑93 (MQ=255)
                                                                                  cccGGCGGCTTTCAGTGATGTAAGCCATCCCTTTTTTCACGGCATCCAGGGGTGAACGTGGAGAGATATCTTTGCCATTAAGACGGATTtctc       <  2:3333594/93‑1 (MQ=255)
                                                                                   ccGGCAGCTTTCAGTGATGTAAGCCATCCCTTTTTTCACGGCATCCAGGGGTGAACGTGGAGAGATAGCTTTGCCATTAAGACGGATTTCTcc      >  2:6420746/1‑93 (MQ=255)
                                                                                    cggcagCTTTCAGTGATGTAAGCCATCCCTTTTTTCACGGCATCCAGGGGTGAACGTGGAGAGATATCTTTGCCATTAAGACGGATTTCTCCg     <  1:6119242/93‑1 (MQ=255)
                                                                                     ggcagcTTTCAGTGATGTAAGCCATCCCTTTTTTCACGGCATCCAGGGGTGAACGTGGAGAGATATCTTTGCCATTAAGACGGATTTCTCCGc    >  2:5131446/1‑93 (MQ=255)
                                                                                        |                                                                                           
GCGCCTTTATAGCCGCCGTCTTTCAGACTGCGGCTGATCGCCATGTTCTGAGCGATGGAAAAGTTGGGGAAAAAACCGTTATCCCGGCGGCTTTCAGTGATGTAAGCCATCCCTTTTTTCACGGCATCCAGGGGTGAACGTGGAGAGATATCTTTGCCATTAAGACGGATTTCTCCGCCA  >  NC_000913/4307433‑4307612

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output
CCATCGCGCCTTTATAGCCGCCGTCTTTCAGACTGCGGCTGATCGCCATGTTCTGAGCGATGGAAAAGTTGGGGAAAAAACCGTTATCCCGGCGGCTTTCAGTGATGTAAGCCATCCCTTTTTTCACGGCATCCAGGGGTGAACGTGGAGAGATATCTTTGCCATTAAGACGGATTTCTCCGCCAGC  >  NC_000913/4307428‑4307614
                                                                                             |                                                                                             
CCATCGCGCCTTTATAGCCGCCGTCTTTCAGCCTGCGGCTGATCGCCATGTTCTGAGCGATGGAAAAGTTGGGGAAAAAACCGTTATCCCGGCG                                                                                               <  SRR4302547.1460124/94‑1 (MQ=60)
CCATCGCGCCTTTATAGCCGCCGTCTTTCAGACTGCGGCTGATCGCCATGTTCTGAGCGATGGAAAAGTTGGGGAAAAAACCGTTATCCCGGCA                                                                                               >  SRR4302547.5328291/1‑94 (MQ=60)
 CATCGCGCCTTTATAGCCGCCGTCTTTCAGACTGCGGCTGATCGCCATGTTCTGAGCGATGGAAAAGTTGGGGAAAAAACCGTTATCCCGGCAG                                                                                              >  SRR4302547.2310651/1‑94 (MQ=60)
 CATCGCGCCTTTATAGCCGCCGTCTTTCAGACTGCGGCTGATCGCCATGTTCTGAGCGATGGAAAAGTTGGGGAAAAAACCGTTATCCCGGCAG                                                                                              >  SRR4302547.4415103/1‑94 (MQ=60)
 CATCGCGCCTTTATAGCCGCCGTCTTTCAGACTGCGGCTGATCGCCATGTTCTGAGCGATGGAAAAGTTGGGGAAAAAACCGTTATCCCGGCAG                                                                                              >  SRR4302547.4814663/1‑94 (MQ=60)
 CATCGCGCCTTTATAGCCGCCGTCTTTCAGACTGCGGCTGATCGCCATGTTCTGAGCGATGGAAAAGTTGGGGAAAAAACCGTTATCCCGGCAG                                                                                              >  SRR4302547.1764714/1‑94 (MQ=60)
 CATCGCGCCTTTATAGCCGCCGTCTTTCAGACTGCGGCTGATCGCCATGTTCTGAGCGATGGAAAAGTTGGGGAAAAAACCGTTATCCCGGCAG                                                                                              >  SRR4302547.3891285/1‑94 (MQ=60)
 CATCGCGCCTTTATAGCCGCCGTCTTTCAGACTGCGGCTGATCGCCATGTTCTGAGCGATGGAAAAGTGGGGGAAAAAACCGTTATCCCGGCAG                                                                                              <  SRR4302547.6539439/94‑1 (MQ=60)
    CGCGCCTTTATAGCCGCCGTCTTTCAGACTGCGGCTGATCGCCATGTTCTGAGCGATGGAAAAGTTGGGGAAAAAACCGTTATCCCGGCAGCTT                                                                                           >  SRR4302547.4500828/1‑94 (MQ=60)
      CGCCTTTATAGCCGCCGTCTTTCAGACTGCGGCTGATCGCCATGTTCTGAGCGATGGAAAAGTTGGGGAAAAAACCGTTATCCCGGCAGCTTTC                                                                                         <  SRR4302547.6570382/94‑1 (MQ=60)
      CGCCTTTATAGCCGCCGTCTTTCAGACTGCGGCTGATCGCCATGTTCTGAGCGATGGAAAAGTTGGGGAAAAAACCGTTATCCCGGCAGCTTTC                                                                                         <  SRR4302547.6552146/94‑1 (MQ=60)
      CGCCTTTATAGCCGCCGTCTTTCAGACTGCGGCTGATCGCCATGTTCTGAGCGATGGAAAAGTTGGGGAAAAAACCGTTATCCCGGCAGCTTTC                                                                                         <  SRR4302547.1835439/94‑1 (MQ=60)
      CGCCTTTATAGCCGCCGTCTTTCAGACTGCGGCTGATCGCCATGTTCTGAGCGATGGAAAAGTTGGGGAAAAAACCGTTATCCCGGCAGCTTTC                                                                                         <  SRR4302547.3472848/94‑1 (MQ=60)
       GCCTTTATAGCCGCCGTCTTTCAGACTGCGGCTGATCGCCATGTTCTGAGCGATGGGAAAGTTGGGGAAAAAACCGTTATCCCGGCAGCTTTCA                                                                                        >  SRR4302547.630835/1‑94 (MQ=60)
       GCCTTTATAGCCGCCGTCTTTCAGACTGCGGCTGATCGCCATGTTCTGAGCGATGGAAAAGTTGGGGAAAAAACCGTTATCCCGGCAGCTTTCA                                                                                        >  SRR4302547.5587145/1‑94 (MQ=60)
       GCCTTTATAGCCGCCGTCTTTCAGACTGCGGCTGATCGCCATGTTCTGAGCGATGGAAAAGTTGGGGAAAAAACCGTTATCCCGGCAGCTTTCA                                                                                        >  SRR4302547.5068213/1‑94 (MQ=60)
        CCTTTATAGCCGCCGTCTTTCAGACTGCGGCTGATCGCCATGTTCTGAGCGATGGAAAAGTTGGGGAAAAAACCGTTATCCCGGCGGCTTTCAG                                                                                       <  SRR4302547.909589/94‑1 (MQ=60)
        CCTTTATAGCCGCCGTCTTTCAGACTGCGGCTGATCGCCATGTTCTGAGCGATGGAAAAGTTGGGGAAAAAACCGTTATCCCGGCAGCTTTCAG                                                                                       <  SRR4302547.1430336/94‑1 (MQ=60)
        CCTTTATAGCCGCCGTCTTTCAGACTGCGGCTGATCGCCATGTTCTGAGCGATGGAAAAGTTGGGGAAAAAACCGTTATCCCGGCAGCTTTCAG                                                                                       >  SRR4302547.4341242/1‑94 (MQ=60)
        CCTTTATAGCCGCCGTCTTTCAGACTGCGGCTGATCGCCATGTTCTGAGCGATGGAAAAGTTGGGGAAAAAACCGTTATCCCGGCAGCTTTAAG                                                                                       <  SRR4302547.845667/94‑1 (MQ=60)
         CTTTATAGCCGCCGTCTTTCAGACTGCGGCTGATCGCCATGTTCTGAGCGATGGAAAAGTTGGGGAAAAAACCGTTATCCCGGCGGCTTTCAGT                                                                                      >  SRR4302547.3761961/1‑94 (MQ=60)
         CTTTATAGCCGCCGTCTTTCAGACTGCGGCTGATCGCCATGTTCTGAGCGATGGAAAAGTTGGGGAAAAAACCGTTATCCCGGCAGCTTTCAGT                                                                                      <  SRR4302547.5288355/94‑1 (MQ=60)
         CTTTATAGCCGCCGTCTTTCAGACTGCGGCTGATCGCCATGTTCTGAGCGATGGAAAAGTTGGGGAAAAAACCGTTATCCCGGCAGCTTTCAGT                                                                                      <  SRR4302547.424271/94‑1 (MQ=60)
          TTTATAGCCGCCGTCTTTCAGACTGCGGCTGATCGCCATGTTCTGAGCGATGGAAAAGTTGGGGAAAAAACCGTTATCCCGGCAGCTTTCAGTG                                                                                     >  SRR4302547.5168232/1‑94 (MQ=60)
          TTTATAGCCGCCGTCTTTCAGACTGCGGCTGATCGCCATGTTCTGAGCGATGGAAAAGTTGGGGAAAAAACCGTTATCCCGGCAGCTTTCAGTG                                                                                     <  SRR4302547.535794/94‑1 (MQ=60)
            TATAGCCGCCGTCTTTCAGACTGCGGCTGATCGCCATGTTCTGAGCGATGGAAAAGTTGGGGAAAAAACCGTTATCCCGGCAGCTTTCAGTGAT                                                                                   >  SRR4302547.428111/1‑94 (MQ=60)
            TATAGCCGCCGTCTTTCAGACTGCGGCTGATCGCCATGTTCTGAGCGATGGAAAAGTTGGGGAAAAAACCGTTATCCCGGCAGCTTTCAGTGAT                                                                                   <  SRR4302547.443719/94‑1 (MQ=60)
             ATAGCCGCCGTCTTTCAGACTGCGGCTGATCGCCATGTTCTGCGCGATCGCAAAGTTGGGGAAAAAACCGTTATCCCGGCAGCTTTCAGTGATG                                                                                  >  SRR4302547.5101134/1‑94 (MQ=60)
             ATAGCCGCCGTCTTTCAGACTGCGGCTGATCGCCATGTTCTGAGCGATGGAAAAGTTGGGGAAAAAACCGTTATCCCGGCAGCTTTCAGTGATG                                                                                  <  SRR4302547.2031111/94‑1 (MQ=60)
              TAGCCGCCGTCTTTCAGACTGCGGCTGATCGCCATGTTCTGAGCGATGGAAAAGTTGGGGAAAAAACCGTTATCCCGGCAGCTTTCAGTGATGT                                                                                 <  SRR4302547.3600300/94‑1 (MQ=60)
              TAGCCGCCGTCTTTCAGACTGCGGCTGATCGCCATGTTCTGAGCGATGGAAAAGTTGGGGAAAAAACCGTTATCCCGGCAGCTTTCAGTGATGT                                                                                 <  SRR4302547.279246/94‑1 (MQ=60)
              TAGCCGCCGTCTTTCAGACTGCGGCTGATCGCCATGTTCTGAGCGATGGAAAAGTTGGGGAAAAAACCGTTATCCCCGCAGCTTTCACTGATGT                                                                                 >  SRR4302547.3612990/1‑94 (MQ=60)
               AGCCGCCGTCTTTCAGACTGCGGCTGATCGCCATGTTCTGAGCGATGGAAAAGTTGGGGAAAAAACCGTTATCCCGGCAGCTTTCAGTGATGTA                                                                                >  SRR4302547.4093095/1‑94 (MQ=60)
               AGCCGCCGTCTTTCAGACTGCGGCTGATCGCCATGTTCTGAGCGATGGAAAAGTTGGGGAAAAAACCGTTATCCCGGCAGCTTTCAGTGATGTA                                                                                >  SRR4302547.968924/1‑94 (MQ=60)
                 CCGCCGTCTTTCAGACTGCGGCTGATCGCCATGTTCTGAGCGATGGAAAAGTTGGGGAAAAAACCGTTATCCCGGCAGCTTTCAGTGATGTAAG                                                                              <  SRR4302547.2256010/94‑1 (MQ=60)
                 CCGCCGTCTTTCAGACTGCGGCTGATCGCCATGTTCTGAGCGATGGAAAAGTTGGGGAAAAAACCGTTATCCCGGCAGCTTTCAGTGATGTAAG                                                                              >  SRR4302547.4798735/1‑94 (MQ=60)
                 CCGCCGTCTTTCAGACTGCGGCTGATCGCCATGTTCTGAGCGATGGAAAAGTTGGGGAAAAAACCGTTATCCCGGCAGCTTTCAGTGATGTAAG                                                                              <  SRR4302547.6523934/94‑1 (MQ=60)
                  CGCCGTCTTTCAGACTGCGGCTGATCGCCATGTTCTGAGCGATGGAAAAGTTGGGGAAAAAACCGTTATCCCGGCAGCTTTCAGTGATGTAAGC                                                                             <  SRR4302547.3974158/94‑1 (MQ=60)
                   GCCGTCTTTCAGACTGCGGCTGATCGCCATGTTCTGAGCGATGGAAAAGTTGGGGAAAAAACCGTTATCCCGGCAGCTTTCAGTGATGTAAGCC                                                                            >  SRR4302547.2030211/1‑94 (MQ=60)
                   GCCGTCTTTCAGACTGCGGCTGATCGCCATGTTCTGAGCGATGGAAAAGTTGGGGAAAAAACCGTTATCCCGGCAGCTTTCAGTGATGTAAGCC                                                                            <  SRR4302547.6600642/94‑1 (MQ=60)
                     CGTCTTTCAGACTGCGGCTGATCGCCATGTTCTGAGCGATGGAAAAGTTGGGGAAAAAACCGTTATCCCGGCGGCTTTCAGTGATGTAAGCCAT                                                                          <  SRR4302547.805498/94‑1 (MQ=60)
                     CGTCTTTCAGACTGCGGCTGATCGCCATGTTCTGAGCGATGGAAAAGTTGGGGAAAAAACCGTTATCCCGGCAGCTTTCAGTGATGTAAGCCAT                                                                          >  SRR4302547.2662120/1‑94 (MQ=60)
                      GTCTTTCAGACTGCGGCTGATCGCCATGTTCTGAGCGATGGAAAAGTTGGGGAAAAAACCGTTATCCCGGCAGCTTTCAGTGATGTAAGCCATC                                                                         >  SRR4302547.1206025/1‑94 (MQ=60)
                       TCTTTCAGACTGCGGCTGATCGCCATGTTCTGAGCGATGGAAAAGTTGGGGAAAAAACCGTTATCCCGGCAGCTTTCAGTGATGTAAGCCATCC                                                                        <  SRR4302547.1136963/94‑1 (MQ=60)
                        CTTTCAGACTGCGGCTGATCGCCATGTTCTGAGCGATGGAAAAGTTGGGGAAAAAACCGTTATCCCGGCAGCTTTCAGTGATGTAAGCCATCCC                                                                       >  SRR4302547.5040691/1‑94 (MQ=60)
                        CTTTCAGACTGCGGCTGATCGCCATGTTCTGAGCGATGGAAAAGTTGGGGAAAAAACCGTTATCCCGGCAGCTTTCAGTGATGTAAGCCATCCC                                                                       >  SRR4302547.3335655/1‑94 (MQ=60)
                         TTTCAGACTGCGGCTGATCGCCATGTTCTGAGCGATGGAAAAGTTGGGGAAAAAACCGTTATCCCGGCAGCTTTCAGTGATGTAAGCCATCCCT                                                                      <  SRR4302547.989147/94‑1 (MQ=60)
                         TTTCAGACTGCGGCTGATCGCCATGTTCTGAGCGATGGAAAAGTTGGGGAAAAAACCGTTATCCCGGCAGCTTTCAGTGATGTAAGCCATCCCT                                                                      <  SRR4302547.1562014/94‑1 (MQ=60)
                          TTCAGACTGCGGCTGATCGCCATGTTCTGAGCGATGGAAAAGTTGGGGAAAAAACCGTTATCCCGGCAGCTTTCAGTGATGTAAGCCATCCCTT                                                                     <  SRR4302547.3713956/94‑1 (MQ=60)
                          TTCAGACTGCGGCTGATCGCCATGTTCTGAGCGATGGAAAAGTTGGGGAAAAAACCGTTATCCCGGCAGCTTTCAGTGATGTAAGCCATCCCTT                                                                     <  SRR4302547.160676/94‑1 (MQ=60)
                           TCAGACTGCGGCTGATCGCCATGTTCTGAGCGATGGAAAAGTTGGGGAAAAAACCGTTATCCCGGCAGCTTTCAGTGATGTAAGCCATCCCTTT                                                                    <  SRR4302547.3952277/94‑1 (MQ=60)
                            CAGACTGCGGCTGATCGCCATGTTCTGAGCGATGGAAAAGTTGGGGAAAAAACCGTTATCCCGGCAGCTTTCAGTGATGTAATCCATCCCTTTT                                                                   >  SRR4302547.1321908/1‑94 (MQ=60)
                            CAGACTGCGGCTGATCGCCATGTTCTGAGCGATGGAAAAGTTGGGGAAAAAACCGTTATCCCGGCAGCTTTCAGTGATGTAAGCCATCCCTTTT                                                                   >  SRR4302547.5882195/1‑94 (MQ=60)
                            CAGACTGCGGCTGATCGCCATGTTCTGAGCGATGGAAAAGTTGGGGAAAAAACCGTTATCCCGGCAGCTTTCAGTGATGTAAGCCATCCCTTTT                                                                   <  SRR4302547.2244425/94‑1 (MQ=60)
                            CAGACTGCGGCTGATCGCCATGTTCTGAGCGATGGAAAAGTTGGGGAAAAAACCGTTATCCCGGCAGCTTTCAGTGATGTAAGCCATCCCTTTT                                                                   <  SRR4302547.5873806/94‑1 (MQ=60)
                              GACTGCGGCTGATCGCCATGTTCTGAGCGATGGAAAAGTTGGGGAAAAAACCGTTATCCCGGCAGCTTTCAGTGATGTAAGCCATCCCTTTTTT                                                                 <  SRR4302547.832638/94‑1 (MQ=60)
                              GACTGCGGCTGATCGCCATGTTCTGAGCGATGGAAAAGTTGGGGAAAAAACCGTTATCCCGGCAGCTTTCAGTGATGTAAGCCATCCCTTTTTT                                                                 <  SRR4302547.2721204/94‑1 (MQ=60)
                                CTGCGGCTGATCGCCATGTTCTGAGCGATGGAAAAGTTGGGGAAAAAACCGTTATCCCGGCGGCTTTCAGTGATGTAAGCCATCCCTTTTTTCA                                                               <  SRR4302547.3075612/94‑1 (MQ=60)
                                CTGCGGCTGATCGCCATGTTCTGAGCGATGGAAAAGTTGGGGAAAAAACCGTTATCCCGGCAGCTTTCAGTGATGTAAGCCATCCCTTTTTTCA                                                               <  SRR4302547.6279220/94‑1 (MQ=60)
                                   CGGCTGATCGCCATGTTCTGAGCGATGGAAAAGTTGGGGAAAAAACCGTTATCCCGGCAGCTTTCAGTGATGTAAGCCATCCCTTTTTTCACGG                                                            <  SRR4302547.6254541/94‑1 (MQ=60)
                                   CGGCTGATCGCCATGTTCTGAGCGATGGAAAAGTTGGGGAAAAAACCGTTATCCCGGCAGCTTTCAGTGATGTAAGCCATCCCTTTTTTCACGG                                                            <  SRR4302547.4231373/94‑1 (MQ=60)
                                   CGGCTGATCGCCATGTTCTGAGCGATGGAAAAGTTGGGGAAAAAACCGTTATCCCGGCAGCTTTCAGTGATGCAAGCCATCCCTTTTTTCACGG                                                            >  SRR4302547.5610949/1‑94 (MQ=60)
                                      CTGATCGCCATGTTCTGAGCGATGGAAAAGTTGGGGAAAAAACCGTTATCCCGGCAGCTTTCAGTGATGTAAGCCATCCCTTTTTTCACGGCAT                                                         >  SRR4302547.155177/1‑94 (MQ=60)
                                       TGATCGCCATGTTCTGAGCGATGGAAAAGTTGGGGAAAAAACCGTTATCCCGGCGGCTTTCAGTGATGTAAGCCATCCCTTTTTTCACGGCATC                                                        >  SRR4302547.1000265/1‑94 (MQ=60)
                                       TGATCGCCATGTTCTGAGCGATGGAAAAGTTGGGGAAAAAACCGTTATCCCGGCAGCTTTCAGTGATGTAAGCCATCCCTTTTTTCACGGCATC                                                        <  SRR4302547.1462033/94‑1 (MQ=60)
                                       TGATCGCCATGTTCTGAGCGATGGAAAAGTTGGGGAAAAAACCGTTATCCCGGCAGCTTTCAGTGATGTAAGCCATCCCTTTTTTCACGGCATC                                                        >  SRR4302547.2380950/1‑94 (MQ=60)
                                        GATCGCCATGTTCTGAGCGATGGAAAAGTTGGGGAAAAAACCGTTATCCCGGCAGCTTTCAGTGATGTAAGCCATCCCTTTTTTCACGGCATCC                                                       <  SRR4302547.5812208/94‑1 (MQ=60)
                                         ATCGCCATGTTCTGAGCGATGGAAAAGTTGGGGAAAAAACCGTTATCCCGGCGGCTTTCAGTGATGTAAGCCATCCCTTTTTTCACGGCATCCA                                                      <  SRR4302547.6667836/94‑1 (MQ=60)
                                         ATCGCCATGTTCTGAGCGATGGAAAAGTTGGGGAAAAAACCGTTATCCCGGCAGCTTTCAGTGATGTAAGCCATCCCTTTTTTCACGGCATCCA                                                      <  SRR4302547.3130011/94‑1 (MQ=60)
                                          TCGCCATGTTCTGAGCGATGGAAAAGTTGGGGAAAAAACCGTTATCCCGGCAGCTTTCAGTGATGTAAGCCATCCCTTTTTTCACGGCATCCAG                                                     <  SRR4302547.5047889/94‑1 (MQ=60)
                                          TCGCCATGTTCTGAGCGATGGAAAAGTTGGGGAAAAAACCGTTATCCCGGCAGCTTTCAGTGATGTAAGCCATCCCTTTTTTCACGGCATCCAG                                                     <  SRR4302547.1963815/94‑1 (MQ=60)
                                          TCGCCATGTTCTGAGCGATGGAAAAGTTGGGGAAAAAACCGTTATCCCGGCAGCTTTCAGTGATGTAAGCCATCCCTTTTTTCACGGCATCCAG                                                     <  SRR4302547.1210122/94‑1 (MQ=60)
                                           CGCCATGTTCTGAGCGATGGAAAAGTTGGGGAAAAAACCGTTATCCCGGCGGCTTTCAGTGATGTAAGCCATCCCTTTTTTCACGGCATCCAGG                                                    >  SRR4302547.2724552/1‑94 (MQ=60)
                                           CGCCATGTTCTGAGCGATGGAAAAGTTGGGGAAAAAACCGTTATCCCGGCAGCTTTCAGTGATGTAAGCCATCCCTTTTTTCACGGCATCCAGG                                                    <  SRR4302547.2082048/94‑1 (MQ=60)
                                           CGCCATGTTCTGAGCGATGGAAAAGTTGGGGAAAAAACCGTTATCCCGGCAGCTTTCAGTGATGTAAGCCATCCCTTTTTTCACGGCATCCAGG                                                    <  SRR4302547.5533198/94‑1 (MQ=60)
                                            GCCATGTTCTGAGCGATGGAAAAGTTGGGGAAAAAACCGTTATCCCGGCAGCTTTCAGTGATGTAAGCCATCCCTTTTTTCACGGCATCCAGGG                                                   <  SRR4302547.306187/94‑1 (MQ=60)
                                            GCCATGTTCTGAGCGATGGAAAAGTTGGGGAAAAAACCGTTATCCCGGCAGCTTTCAGTGATGTAAGCCATCCCTTTTTTCACGGCATCCAGGG                                                   >  SRR4302547.3103616/1‑94 (MQ=60)
                                            GCCATGTTCTGAGCGATGGAAAAGTTGGGGAAAAAACCGTTATCCCGGCAGCTTTCAGTGATGTAAGCCATCCCTTTTTTCACGGCATCCAGGG                                                   <  SRR4302547.6180965/94‑1 (MQ=60)
                                            GCCATGTTCTGAGCGATGGAAAAGTTGGGGAAAAAACCGTTATCCCGGCAGCTTTCAGTGATGTAAGCCATCCCTTTTTTCACGGCATCCAGGG                                                   >  SRR4302547.4095941/1‑94 (MQ=60)
                                             CCATGTTCTGAGCGATGGAAAAGTTGGGGCAAAAACCGTTATCCCGGCAGCTTTCAGTGATGTAAGCCATCCCTTTTTTCACGGCATCCAGGGG                                                  >  SRR4302547.234955/1‑94 (MQ=60)
                                             CCATGTTCTGAGCGATGGAAAAGTTGGGGAAAAAACCGTTATCCCGGCAGCTTTCAGTGATGTAAGCCATCCCTTTTTTCACGGCATCCAGGGG                                                  <  SRR4302547.6406721/94‑1 (MQ=60)
                                              CATGTTCTGAGCGATGGAAAAGTTGGGGAAAAAACCGTTATCCCGGCGGCTTTCAGTGATGTAAGCCATCCCTTTTTTCACGGCATCCAGGGGT                                                 <  SRR4302547.3721887/94‑1 (MQ=60)
                                              CATGTTCTGAGCGATGGAAAAGTTGGGGAAAAAACCGTTATCCCGGCAGCTTTCAGTGATGTAAGCCATCCCTTTTTTCACGGCATCCAGGGGT                                                 >  SRR4302547.3125803/1‑94 (MQ=60)
                                              CATGTTCTGAGCGATGGAAAAGTTGGGGAAAAAACCGTTATCCCGGCAGCTTTCAGTGATGTAAGCCATCCCTTTTTTCACGGCATCCAGGGGG                                                 >  SRR4302547.91486/1‑94 (MQ=60)
                                               ATGTTCTGAGCGATGGAAAAGTTGGGGAAAAAACCGTTATCCCGGCAGCTTTCAGTGATGTAAGCCATCCCTTTTTTCACGGCATCCAGGGGTG                                                >  SRR4302547.5813389/1‑94 (MQ=60)
                                                TGTTCTGAGCGATGGAAAAGTTGGGGAAAAAACCGTTATCCCGGCAGCTTTCAGTGATGTAAGCCATCCCTTTTTTCACGGCATCCAGGGGTGA                                               <  SRR4302547.5318692/94‑1 (MQ=60)
                                                  TTCTGAGCGCTGGAAAAGTTGGGGAAAAAACCGTTATCCCGGCAGCTTTCAGTGATGTAAGCCATCCCTTTTTTCACGGCATCCAGGGGTGAAC                                             >  SRR4302547.6631538/1‑94 (MQ=60)
                                                  TTCTGAGCGATGGAAAAGTTGGGGAAAAAACCGTTATCCCGGCAGCTTTCAGTGATGTAAGCCATCCCTTTTTTCACGGCATCCAGGGGTGAAC                                             <  SRR4302547.2160952/94‑1 (MQ=60)
                                                  TTCTGAGCGATGGAAAAGTTGGGGAAAAAACCGTTATCCCGGCAGCTTTCAGTGATGTAAGCCATCCCTTTTTTCACGGCATCCAGGGGTGAAC                                             <  SRR4302547.37161/94‑1 (MQ=60)
                                                   TCTGAGCGATGGAAAAGTTGGGGAAAAAACCGTTATCCCGGCAGCTTTCAGTGATGTAAGCCATCCCTTTTTTCACGGCATCCAGGGGTGAACG                                            >  SRR4302547.2442863/1‑94 (MQ=60)
                                                   TCTGAGCGATGGAAAAGTTGGGGAAAAAACCGTTATCCCGGCAGCTTTCAGTGATGTAAGCCATCCCTTTTTTCACGGCATCCAGGGGTGAACG                                            <  SRR4302547.3719420/94‑1 (MQ=60)
                                                       AGCGATGGAAAAGTTGGGGAAAAAACCGTTATCCCGGCAGCTTTCAGTGATGTAAGCCATCCCTTTTTTCACGGCATCCAGGGGTGAACGTGGA                                        >  SRR4302547.1111015/1‑94 (MQ=60)
                                                       AGCGATGGAAAAGTTGGGGAAAAAACCGTTATCCCGGCAGCTTTCAGTGATGTAAGCCATCCCTTTTTTCACGGCATCCAGGGGTGAACGTGGA                                        >  SRR4302547.5476871/1‑94 (MQ=60)
                                                         TGATGGAAAAGTTGGGGAAAAAACCGTTATCCCGGCGGCTTTCAGTGATGTAAGCCATCCCTTTTTTCACGGCATCCAGGGGTGAACGTGGAGA                                      >  SRR4302547.2408269/1‑94 (MQ=60)
                                                         CGATGGAAAAGTTGGGGAAAAAACCGTTATCCCGGCAGCTTTCAGTGATGTAAGCCATCCCTTTTTTCACGGCATCCAGGGGTGAACGTGGAGA                                      >  SRR4302547.556695/1‑94 (MQ=60)
                                                         CGATGGAAAAGTTGGGGAAAAAACCGTTATCCCGGCAGCTTTCAGTGATGTAAGCCATCCCTTTTTTCACGGCATCCAGGGGTGAACGTGGAGA                                      <  SRR4302547.4648568/94‑1 (MQ=60)
                                                          GATGGAAAAGTTGGGGAAAAAACCGTTATCCCGGCAGCTTTCAGTGATGTAAGCCATCCCTTTTTTCACGGCATCCAGGGGTGAACGTGGAGAG                                     >  SRR4302547.3096358/1‑94 (MQ=60)
                                                          GATGGAAAAGTTGGGGAAAAAACCGTTATCCCGGCAGCTTTCAGTGATGTAAGCCATCCCTTTTTTCACGGCATCCAGGGGTGAACGTGGAGAG                                     >  SRR4302547.353773/1‑94 (MQ=60)
                                                          GATGGAAAAGTTGGGGAAAAAACCGTTATCCCGGCAGCTTTCAGTGATGTAAGCCATCCCTTTTTTCACGGCATCCAGGGGTGAACGTGGAGAG                                     <  SRR4302547.4053433/94‑1 (MQ=60)
                                                          GATGGAAAAGTTGGGGAAAAAACCGTTATCCCGGCAGCTTTCAGTGATGTAAGCCATCCCTTTTTTCACGGCATCCAGGGGTGAACGTGGAGAG                                     >  SRR4302547.4407620/1‑94 (MQ=60)
                                                           ATGGAAAAGTTGGGGAAAAAACCGTTATCCCGGCGGCTTTCAGTGATGTAAGCCATCCCTTTTTTCACGGCATCCAGGGGTGAACGTGGAGAGA                                    >  SRR4302547.4690951/1‑94 (MQ=60)
                                                           ATGGAAAAGTTGGGGAAAAAACCGTTATCCCGGCAGCTTTCAGTGATGTAAGCCATCCCTTTTTTCACGGCATCCAGGGGTGAACGTGGAGAGA                                    >  SRR4302547.3292200/1‑94 (MQ=60)
                                                            TGGAAAAGTTGGGGAAAAAACCGTTATCCCGGCAGCTTTCAGTGATGTAAGCCATCCCTTTTTTCACGGCATCCAGGGGTGAACGTGGAGAGAT                                   <  SRR4302547.4308877/94‑1 (MQ=60)
                                                             GGAAAAGTTGGGGAAAAAACCGTTATCCCGGCAGCTTTCAGTGATGTAAGCCATCCCTTTTTTCACGGCATCCAGGGGTGAACGTGGAGAGATA                                  >  SRR4302547.2923394/1‑94 (MQ=60)
                                                             GGAAAAGTTGGGGAAAAAACCGTTATCCCGGCAGCTTTCAGTGATGTAAGCCATCCCTTTTTTCACGGCATCCAGGGGTGAACGTGGAGAGATA                                  >  SRR4302547.6100833/1‑94 (MQ=60)
                                                              GAAAAGTTGGGGAAAAAACCGTTATCCCGGCAGCTTTCAGTGATGTAAGCCATCCCTTTTTTCACGGCATCCAGGGGTGAACGTGGAGAGATAT                                 <  SRR4302547.5092237/94‑1 (MQ=60)
                                                               AAAAGTTGGGGAAAAAACCGTTATCCCGGCAGCTTTCAGTGATGTAAGCCATCCCTTTTTTCACGGCATCCAGGGGTGAACGTGGAGAGATATC                                <  SRR4302547.2142368/94‑1 (MQ=60)
                                                               AAAAGTTGGGGAAAAAACCGTTATCCCGGCAGCTTTCAGTGATGTAAGCCATCCCTTTTTTCACGGCATCCAGGGGTGAACGTGGAGAGATATC                                >  SRR4302547.1583367/1‑94 (MQ=60)
                                                                AAAGTTGGGGAAAAAACCGTTATCCCGGCAGCTTTCAGTGATGTAAGCCATCCCTTTTTTCACGGCATCCAGGGGTGAACGTGGAGAGATATCT                               >  SRR4302547.5437010/1‑94 (MQ=60)
                                                                AAAGTTGGGGAAAAAACCGTTATCCCGGCAGCTTTCAGTGATGTAAGCCATCCCTTTTTTCACGGCATCCAGGGGTGAACGTGGAGAGATATCT                               >  SRR4302547.2667744/1‑94 (MQ=60)
                                                                  AGTTGGGGAAAAAACCGTTATCCCGGCAGCTTTCAGTGATGTAAGCCATCCCTTTTTTCACGGCATCCAGGGGTGAACGTGGAGAGATATCTTT                             >  SRR4302547.1715267/1‑94 (MQ=60)
                                                                    TTGGGGAAAAAACCGTTATCCCGGCGGCTTTCAGTGATGTAAGCCATCCCTTTTTTCACGGCATCCAGGGGTGAACGTGGAGAGATATCTTTGC                           >  SRR4302547.6498124/1‑94 (MQ=60)
                                                                    TTGGGGAAAAAACCGTTATCCCGGCAGCTTTCAGTGATGTAAGCCATCCCTTTTTTCACGGCATCCAGGGGTGAACGTGGAGAGATATCTTTGC                           <  SRR4302547.3127262/94‑1 (MQ=60)
                                                                    TTGGGGAAAAAACCGTTATCCCGGCAGCTTTCAGTGATGTAAGCCATCCCTTTTTTCACGGCATCCAGGGGTGAACGTGGAGAGATATCTTTGC                           >  SRR4302547.2083215/1‑94 (MQ=60)
                                                                    TTGGGGAAAAAACCGTTATCCCGGCAGCTTTCAGTGATGTAAGCCATCCCTTTTTTCACGGCATCCAGGGGAGAACGTGGAGAGATATCTTTGC                           >  SRR4302547.5742689/1‑94 (MQ=60)
                                                                     TGGGGAAAAAACCGTTATCCCGGCAGCTTTCAGTGATGTAAGCCATCCCTTTTTTCACGGCATCCAGGGGTGAACGTGGAGAGATATCTTTGCC                          >  SRR4302547.21248/1‑94 (MQ=60)
                                                                      GGGGAAAAAACCGTTATCCCGGCAGCTTTCAGTGATGTAAGCCATCCCTTTTTTCACGGCATCCAGGGGTGAACGTGGAGAGATATCTTTGTCA                         >  SRR4302547.5939893/1‑94 (MQ=60)
                                                                         GAAAAAACCGTTATCCCGGCGGCTTTCAGTGATGTAAGCCATCCCTTTTTTCACGGCATCCAGGGGTGAACGTGGAGAGATATCTTTGCCATTA                      <  SRR4302547.3031698/94‑1 (MQ=60)
                                                                         GAAAAAACCGTTATCCCGGCGGCTTTCAGTGATGTAAGCCATCCCTTTTTTCACGGCATCCAGGGGTGAACGTGGAGAGATATCTTTGCCATTA                      >  SRR4302547.1722839/1‑94 (MQ=60)
                                                                          AAAAAACCGTTATCCCGGCAGCTTTCAGTGATGTAAGCCATCCCTTTTTTCACGGCATCCAGGGGTGAACGTGGAGAGATATCTTTGCCATTAA                     <  SRR4302547.232493/94‑1 (MQ=60)
                                                                          AAAAAACCGTTATCCCGGCAGCTTTCAGTGATGTAAGCCATCCCTTTTTTCACGGCATCCAGGGGTGAACGTGGAGAGATATCTTTGCCATTAA                     <  SRR4302547.1764592/94‑1 (MQ=60)
                                                                          AAAAAACCGTTATCCCGGCAGCTTTCAGTGATGTAAGCCATCCCTTTTTTCACGGCATCCAGGGGTGAACGTGGAGAGATATCTTTGCCATTAA                     <  SRR4302547.3918074/94‑1 (MQ=60)
                                                                           AAAAACCGTTATCCCGGCAGCTTTCAGTGATGTAAGCCATCCCTTTTTTCACGGCATCCAGGGGTGAACGTGGAGAGATATCTTTGCCATTAAG                    <  SRR4302547.60630/94‑1 (MQ=60)
                                                                            AAAACCGTTATCCCGGCAGCTTTCAGTGATGTAAGCCATCCCTTTTTTCACGGCATCCAGGGGTGAACGTGGAGAGATATCTTTGCCATTAAGA                   >  SRR4302547.2042077/1‑94 (MQ=60)
                                                                            AAAACCGTTATCCCGGCAGCTTTCAGTGATGTAAGCCATCCCTTTTTTCACGGCATCCAGGGGTGAACGTGGAGAGATATCTTTGCCATTAAGA                   <  SRR4302547.1282135/94‑1 (MQ=60)
                                                                             AAACCGTTATCCCGGCAGCTTTCAGTGATGTAAGCCATCCCTTTTTTCACGGCATCCAGGGGTGAACGTGGAGAGATATCTTTGCCATTAAGAC                  >  SRR4302547.5916576/1‑94 (MQ=60)
                                                                             AAACCGTTATCCCGGCAGCTTTCAGTGATGTAAGCCATCCCTTTTTTCACGGCATCCAGGGGTGAACGTGGAGAGATATCTTTGCCATTAAGAC                  <  SRR4302547.6196854/94‑1 (MQ=60)
                                                                             AAACCGTTATCCCGGCAGCTTTCAGTGATGGAAGCCATCCCTTTTTTCACGGCATCCAGGGGTGAACGTGGAGAGATATCTTTGCCATTAAGAC                  >  SRR4302547.6556591/1‑94 (MQ=60)
                                                                              AACCGTTATCCCGGCAGCTTTCAGTGATGTAAGCCATCCCTTTTTTCACGGCATCCAGGGGTGAACGTGGAGAGATATCTTTTCCATTAAGACG                 >  SRR4302547.3961853/1‑94 (MQ=60)
                                                                              AACCGTTATCCCGGCAGCTTTCAGTGATGTAAGCCATCCCTTTTTTCACGGCATCCAGGGGTGAACGTGGAGAGATATCTTTGCCATTAAGACG                 >  SRR4302547.5621776/1‑94 (MQ=60)
                                                                              AACCGTTATCCCGGCAGCTTTCAGTGATGTAAGCCATCCCTTTTTTCACGGCATCCAGGGGTGAACGTGGAGAGATATCTTTGCCATTAAGACG                 >  SRR4302547.73566/1‑94 (MQ=60)
                                                                              AACCGTTATCCCGGCAGCTTTCAGTGATGTAAGCCATCCCTTTTTTCACGGCATCCAGGGGCGAACCTGCAGAGATATCTTTGCCATTAAGCCG                 >  SRR4302547.3370727/1‑94 (MQ=60)
                                                                               ACCGTTATCCCGGCAGCTTTCAGTGATGTAAGCCATCCCTTTTTTCACGGCATCCAGGGGTGAACGTGGAGAGATATCTTTGCCATTAAGACGG                >  SRR4302547.2015861/1‑94 (MQ=60)
                                                                               ACCGTTATCCCGGCAGCTTTCAGTGATGTAAGCCATCCCTTTTTTCACGGCATCCAGGGGTGAACGTGGAGAGATATCTTTGCCATTAAGACGG                <  SRR4302547.771678/94‑1 (MQ=60)
                                                                               ACCGTTATCCCGGCAGCTTTCAGTGATGTAAGCCATCCCTTTTTTCACGGCATCCAGGGGTGAACGTGGAGAGATATCTTTGCCATTAAGACGG                <  SRR4302547.2138899/94‑1 (MQ=60)
                                                                                CCGTTATCCCGGCAGCTTTCAGTGATGTAAGCCATCCCTTTTTTCACGGCATCCAGGGGTGAACGTGGAGAGATATCTTTGCCATTAAGACGGA               <  SRR4302547.4700803/94‑1 (MQ=60)
                                                                                 CGTTATCCCGGCAGCTTTCAGTGATGTAAGCCATCCCTTTTTTCACGGCATCCAGGGGTGAACGTGGAGAGATATCTTTGCCATTAAGACGGAT              <  SRR4302547.3551005/94‑1 (MQ=60)
                                                                                  GTTATCCCGGCGGCTTTCAGTGATGTAAGCCATCCCTTTTTTCACGGCATCCAGGGGTGAACGTGGAGAGATATCTTTGCCATTAAGACGGATT             >  SRR4302547.6416675/1‑94 (MQ=60)
                                                                                  GTTATCCCGGCGGCTTTCAGTGATGTAAGCCATCCCTTTTTTCACGGCATACAGGGGTGAACGTGGAGAGATATCTTTGCCATTAAGACGGATT             >  SRR4302547.6442477/1‑94 (MQ=60)
                                                                                  GTTATCCCGGCAGCTTTCAGTGATGTAAGCCATCCCTTTTTTCACGGCATCCAGGGGTGAACGTGGAGAGATATCTTTGCCATTAAGACGGATT             >  SRR4302547.5532521/1‑94 (MQ=60)
                                                                                   TTATCCCGGCGGCTTTCAGTGATGTAAGCCATCCCTTTTTTCACGGCATCCAGGGGTGAACGTGGAGAGATATCTTTGCCATTAAGACGGATTT            >  SRR4302547.3064819/1‑94 (MQ=60)
                                                                                   TTATCCCGGCGGCTTTCAGTGATGTAAGCCATCCCTTTTTTCACGGCATCCAGGGGTGAACGTGGAGAGATATCTTTGCCATTAAGACGGATTT            >  SRR4302547.6382565/1‑94 (MQ=60)
                                                                                   TTATCCCGGCAGCTTTCAGTGATGTAAGCCATCCCTTTTTTCACGGCATCCAGGGGTGAACGTGGAGAGATATCTTTGCCATTAAGACGGATTT            <  SRR4302547.6717031/94‑1 (MQ=60)
                                                                                   TTATCCCGGCAGCTTTCAGTGATGTAAGCCATCCCTTTTTTCACGGCATCCAGGGGTGAACGTGGAGAGATATCTTTGCCATTAAGACGGATTT            <  SRR4302547.554865/94‑1 (MQ=60)
                                                                                   TTATCCCGGCAGCTTTCAGTGATGTAAGCCATCCCTTTTTTCACGGCATCCAGGGGTGAACGTGGAGAGATATCTTTGCCATTAAGACGGATTT            <  SRR4302547.736865/94‑1 (MQ=60)
                                                                                    TATCCCGGCAGCTTTCAGTGATGTAAGCCATCCCTTTTTTCACGGCATCCAGGGGTGAACGTGGAGAGATATCTTTGCCATTAAGACGGATTTC           >  SRR4302547.5643499/1‑94 (MQ=60)
                                                                                      TCCCGGCAGCTTTCAGTGATGTAAGCCATCCCTTTTTTCACGGCATCCAGGGGTGAACGTGGAGAGATATCTTTGCCATTAAGACGGATTTCTC         >  SRR4302547.6389168/1‑94 (MQ=60)
                                                                                       CCCGGCAGCTTTCAGTGATGTAAGCCATCCCTTTTTTCACGGCATCCAGGGGTGAACGTGGAGAGATATCTTTGCCATTAAGAAGGATTTCTCC        >  SRR4302547.2690735/1‑94 (MQ=60)
                                                                                        CCGGCAGCTTTCAGTGATGTAAGCCATCCCTTTTTTCACGGCATCCAGGGGTGAACGTGGAGAGATATCTTTGCCATTAAGACGGATTTCTCCG       <  SRR4302547.4305862/94‑1 (MQ=60)
                                                                                         CGGCAGCTTTCAGTGATGTAAGCCATCCCTTTTTTCACGGCATCCAGGGGTGAACGTGGAGAGATATCTTTGCCATTAAGACGGATTTCTCCGC      <  SRR4302547.6246168/94‑1 (MQ=60)
                                                                                          GGCAGCTTTCAGTGATGTAAGCCATCCCTTTTTTCACGGCATCCAGGGGTGAACGTGGAGAGATATCTTTGCCATTAAGACGGATTTCTCCGCC     >  SRR4302547.1014515/1‑94 (MQ=60)
                                                                                            CAGCTTTCAGTGATGTAAGCCATCCCTTTTTTCACGGCATCCAGGGGTGAACGTGGAGAGATATCTTTGCCATTAAGACGGATTTCTCCGCCAG   <  SRR4302547.2617638/94‑1 (MQ=60)
                                                                                            CAGCTTTCAGTGATGTAAGCCATCCCTTTTTTCACGGCATCCAGGGGTGAACGTGGAGAGATATCTTTGCCATTAAGACGGATTTCTCCGCCAG   <  SRR4302547.3849590/94‑1 (MQ=60)
                                                                                            CAGCTTTCAGTGATGTAAGCCATCCCTTTTTTCACGGCATCCAGGGGTGAACGTGGAGAGATATCTTTGCCATTAAGACGGATTTCTCCGCCAG   >  SRR4302547.3380741/1‑94 (MQ=60)
                                                                                            CAGCTTTCAGTGATGTAAGCCATCCCTTTTTTCACGGCATCCAGGGGTGAACGTGGAGAGATATCTTTGCCATTAAGACGGATTTCTCCGCCAG   <  SRR4302547.1622360/94‑1 (MQ=60)
                                                                                             GGCTTTCAGTGATGTAAGCCATCCCTTTTTTCACGGCATCCAGGGGTGAACGTGGAGAGATATCTTTGCCATTAAGACGGATTTCTCCGCCAGC  >  SRR4302547.6371865/1‑94 (MQ=60)
                                                                                             AGCTTTCAGTGATGTAAGCCATCCCTTTTTTCACGGCATCCAGGGGTGAACGTGGAGAGATATCTTTGCCATTAAGACGGATTTCTCCGCCAGC  >  SRR4302547.5107145/1‑94 (MQ=60)
                                                                                             |                                                                                             
CCATCGCGCCTTTATAGCCGCCGTCTTTCAGACTGCGGCTGATCGCCATGTTCTGAGCGATGGAAAAGTTGGGGAAAAAACCGTTATCCCGGCGGCTTTCAGTGATGTAAGCCATCCCTTTTTTCACGGCATCCAGGGGTGAACGTGGAGAGATATCTTTGCCATTAAGACGGATTTCTCCGCCAGC  >  NC_000913/4307428‑4307614

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑