Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I2 R1 593 264.2 13311096 97.8% 13018251 93.0

Breseq alignment

N/A

GATK/CNVnator alignment

BRESEQ :: bam2aln output
ATACCGCAAAAGAAGAATTAGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCG‑‑CT‑‑CG‑‑GCG‑‑‑CATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCACGCTTTACACCGGGGGAAACCAT  >  NC_000913/4448449‑4448634
                                                                                                |                                                                                                  
ATACCGCAAAAGAAGAATTAGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCG‑‑CT‑‑CG‑‑C                                                                                                 >  SRR4302547.1088256/1‑94 (MQ=60)
ATACCGCAAAAGAAGAATTAGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCG‑‑CT‑‑CG‑‑C                                                                                                 >  SRR4302547.3439096/1‑94 (MQ=60)
 TACCGCAAAAGAAGAATTAGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTGGGCCGGATAAGGCG‑‑CT‑‑CGcg                                                                                                  <  SRR4302547.6629024/94‑3 (MQ=60)
 TACCGCAAAAGAAGAATTAGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCG‑‑CT‑‑CGcg                                                                                                  <  SRR4302547.1337253/94‑3 (MQ=60)
    CGCAAAAGAAGAATTAGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCG‑‑CT‑‑CGcgccg                                                                                               >  SRR4302547.4586060/1‑89 (MQ=60)
    CGCAAAAGAAGAATTAGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCG‑‑CT‑‑CGcgccg                                                                                               >  SRR4302547.2252283/1‑89 (MQ=60)
     GCAAAAGAAGAATTAGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCG‑‑CT‑‑CGcgccgc                                                                                              >  SRR4302547.4023649/1‑88 (MQ=60)
      CAAAAGAAGAATTAGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCG‑‑CT‑‑CGcgccgca                                                                                             <  SRR4302547.1032581/94‑8 (MQ=60)
      CAAAAGAAGAATTAGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCG‑‑CT‑‑CGcgccgca                                                                                             >  SRR4302547.895498/1‑87 (MQ=60)
      CAAAAGAAGAATTAGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCG‑‑CT‑‑CGcgccgca                                                                                             >  SRR4302547.1999911/1‑87 (MQ=60)
       AAAAGAAGAATTAGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCG‑‑CT‑‑CGcgccgcat                                                                                            <  SRR4302547.3807796/94‑9 (MQ=60)
       AAAAGAAGAATTAGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCG‑‑CT‑‑CGcgccgcat                                                                                            >  SRR4302547.2594736/1‑86 (MQ=60)
          AGAAGAATTAGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCG‑‑CTCGCG‑‑CCG‑‑‑CATCCG                                                                                      <  SRR4302547.6560546/94‑1 (MQ=60)
          AGAAGAATTAGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCG‑‑CT‑‑CGcgccgcatacg                                                                                         >  SRR4302547.5173180/1‑83 (MQ=60)
           GAAGAATTAGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCG‑‑CTCGCG‑‑CCG‑‑‑CATCCGG                                                                                     >  SRR4302547.5175364/1‑94 (MQ=60)
           GAAGAATTAGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCG‑‑CTCGCG‑‑CCG‑‑‑CATCCGG                                                                                     >  SRR4302547.4750564/1‑94 (MQ=60)
           GAAGAATTAGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCG‑‑CTCGCG‑‑CCG‑‑‑CATCCGG                                                                                     <  SRR4302547.120100/94‑1 (MQ=60)
             AGAATTAGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCG‑‑CTCGCG‑‑CCG‑‑‑CATCCGGCG                                                                                   >  SRR4302547.4719354/1‑94 (MQ=60)
               AATTAGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCG‑‑CTCGCG‑‑CCG‑‑‑CATCCGGCGAT                                                                                 <  SRR4302547.3053344/94‑1 (MQ=60)
                 TTAGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCG‑‑CTCGCG‑‑CCG‑‑‑CATCCGGCGATGG                                                                               <  SRR4302547.1945639/94‑1 (MQ=60)
                  TAGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCG‑‑CTCGCG‑‑CCG‑‑‑CATCCGGCGATGGT                                                                              <  SRR4302547.2404491/94‑1 (MQ=60)
                  GAGAGAAGAAGAAAAATATGGGTTATGGAGGGTGTCTATGCCTGATACCAATTCGTAGGCAGGATAAGGCT‑‑CT‑‑C‑‑‑GCGCCCCATCCGGCGATGGT                                                                              <  SRR4302547.2347048/94‑1 (MQ=23)
                   AGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCG‑‑CTCGCG‑‑CCG‑‑‑CATCCGGCGATGGTG                                                                             >  SRR4302547.3140660/1‑94 (MQ=60)
                   AGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCG‑‑CTCGCG‑‑CCG‑‑‑CATCCGGCGATGGTG                                                                             >  SRR4302547.4566137/1‑94 (MQ=60)
                    GAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCG‑‑CTCGCG‑‑CCG‑‑‑CATCCGGCGATGGTGC                                                                            >  SRR4302547.1608453/1‑94 (MQ=60)
                    GAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCG‑‑CTCGCG‑‑CCG‑‑‑CATCCGGCGATGGTGC                                                                            >  SRR4302547.1275631/1‑94 (MQ=60)
                     AGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCG‑‑CTCGCG‑‑CCG‑‑‑CATCCGGCGATGGTGCA                                                                           >  SRR4302547.5846385/1‑94 (MQ=60)
                      GAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCG‑‑CTCGCG‑‑CCG‑‑‑CATCCGGCGATGGTGCAC                                                                          >  SRR4302547.114025/1‑94 (MQ=60)
                       AAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCG‑‑CTCGCG‑‑CCG‑‑‑CATCCGGCGATGGTGCACT                                                                         >  SRR4302547.5818565/1‑94 (MQ=60)
                       AAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCG‑‑CTCGCG‑‑CCG‑‑‑CATCCGGCGATGGTGCACT                                                                         <  SRR4302547.2761291/94‑1 (MQ=60)
                       AAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCG‑‑CTCGCG‑‑CCG‑‑‑CATCCGGCGATGGTGCACT                                                                         >  SRR4302547.3294602/1‑94 (MQ=60)
                        AGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCG‑‑CTCGCG‑‑CCG‑‑‑CATCCGGCGATGGTGCACTG                                                                        >  SRR4302547.1913586/1‑94 (MQ=60)
                        AGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCG‑‑CTCGCG‑‑CCG‑‑‑CATCCGGCGATGGTGCACTG                                                                        >  SRR4302547.2754880/1‑94 (MQ=60)
                         GAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCG‑‑CTCGCG‑‑CCG‑‑‑CATCCGGCGATGGTGCACTGA                                                                       <  SRR4302547.5370663/94‑1 (MQ=60)
                          AAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCG‑‑CTCGCG‑‑CCG‑‑‑CATCCGGCGATGGTGCACTGAA                                                                      >  SRR4302547.4086883/1‑94 (MQ=60)
                           GGAAAAATATGGGGCATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCG‑‑CT‑‑CGCTCCG‑‑‑CATCCAACGATGGTGCACTGAAG                                                                     >  SRR4302547.4267793/1‑94 (MQ=60)
                           AGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCG‑‑CTCGCG‑‑CCG‑‑‑CATCCGGCGATGGTGCACTGAAG                                                                     >  SRR4302547.3529755/1‑94 (MQ=60)
                            GAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCG‑‑CTCGCG‑‑CCG‑‑‑CATCCGGCGATGGTGCACTGAAGC                                                                    >  SRR4302547.6673523/1‑94 (MQ=60)
                               AAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCG‑‑CTCGCG‑‑CCG‑‑‑CATCCGGCGATGGTGCACTGAAGCCTG                                                                 >  SRR4302547.118880/1‑94 (MQ=60)
                                AATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCG‑‑CTCGCG‑‑CCG‑‑‑CATCCGGCGATGGTGCACTGAAGCCTGA                                                                <  SRR4302547.5147267/94‑1 (MQ=60)
                                 ATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCG‑‑CTCGCG‑‑CCG‑‑‑CATCCGGCGATGGTGCACTGAAGCCTGAT                                                               >  SRR4302547.2278295/1‑94 (MQ=60)
                                 ATAGGGGGTATTGAGGTTTCCTATGCCTGATGCCGATTCGTAGGCGGGATAAGGCG‑‑CTCGCG‑‑CCG‑‑‑CATCCGGCGATGGTGCACTGAAGCCTGAT                                                               <  SRR4302547.5813357/94‑1 (MQ=56)
                                  TATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCG‑‑CTCGCG‑‑CCG‑‑‑CATCCGGCGATGGTGCACTGAAGCCTGATG                                                              >  SRR4302547.4478368/1‑94 (MQ=60)
                                  TATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCG‑‑CTCGCG‑‑CCG‑‑‑CATCCGGCGATGGTGCACTGAAGCCTGATG                                                              <  SRR4302547.826425/94‑1 (MQ=60)
                                       GGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCG‑‑CTCGCG‑‑CCG‑‑‑CATCCGGCGATGGTGCACTGAAGCCTGATGCGACG                                                         >  SRR4302547.53469/1‑94 (MQ=60)
                                        GTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCG‑‑CTCGCG‑‑CCG‑‑‑CATCCGGCGATGGTGCACTGAAGCCTGATGCGACGC                                                        >  SRR4302547.6206325/1‑94 (MQ=60)
                                         TATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCG‑‑CTCGCG‑‑CCG‑‑‑CATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCT                                                       >  SRR4302547.972687/1‑94 (MQ=60)
                                         TATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCG‑‑CTCGCG‑‑CCG‑‑‑CATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCT                                                       <  SRR4302547.6079967/94‑1 (MQ=60)
                                         TATTGAGGGTTGCTATGCCTGATGCCGATTCGCAGGCCGGATAAGGCGCTCT‑‑CG‑‑CCG‑‑‑CATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCT                                                       >  SRR4302547.3464094/1‑94 (MQ=60)
                                          ATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCG‑‑CTCGCG‑‑CCG‑‑‑CATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTT                                                      >  SRR4302547.5980407/1‑94 (MQ=60)
                                          ATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCG‑‑CTCGCG‑‑CCG‑‑‑CATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTT                                                      >  SRR4302547.1685425/1‑94 (MQ=60)
                                            TGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCG‑‑CTCGCG‑‑CCG‑‑‑CATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTAC                                                    >  SRR4302547.4980747/1‑94 (MQ=60)
                                            TGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCG‑‑CTCGCG‑‑CCG‑‑‑CATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTAC                                                    >  SRR4302547.1214305/1‑94 (MQ=60)
                                            TGAGGGTTGCTATGCCTGAGGCCGATTCGTAGGCGGGATAAGGCG‑‑CT‑‑CGCCCCG‑‑‑CATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTAC                                                    <  SRR4302547.426683/94‑1 (MQ=60)
                                            TGAGGGTGGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCG‑‑CTCGCG‑‑CCG‑‑‑CATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTAC                                                    <  SRR4302547.439684/94‑1 (MQ=60)
                                             GAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCG‑‑CTCGCG‑‑CCG‑‑‑CATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACC                                                   <  SRR4302547.2674992/94‑1 (MQ=60)
                                             GAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCG‑‑CTCGCG‑‑CCG‑‑‑CATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACC                                                   <  SRR4302547.2532957/94‑1 (MQ=60)
                                             GAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCG‑‑CTCGCG‑‑CCG‑‑‑CATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACC                                                   <  SRR4302547.6726734/94‑1 (MQ=60)
                                              AGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCG‑‑CTCGCG‑‑CCG‑‑‑CATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCG                                                  >  SRR4302547.4813652/1‑94 (MQ=60)
                                                GGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCG‑‑CTCGCG‑‑CCG‑‑‑CATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCG                                                <  SRR4302547.3094341/94‑1 (MQ=60)
                                                GGTTGCTATGCCTGATGCCGATCCGTAGGCCGGATAGGGCG‑‑CT‑‑CGCCCCG‑‑‑CACCGGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCG                                                <  SRR4302547.5740781/94‑1 (MQ=60)
                                                 GTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCG‑‑CTCGCG‑‑CCG‑‑‑CATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGT                                               >  SRR4302547.548111/1‑94 (MQ=60)
                                                  TTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCG‑‑CTCGCG‑‑CCG‑‑‑CATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTC                                              <  SRR4302547.5462756/94‑1 (MQ=60)
                                                    GCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCG‑‑CTCGCG‑‑CCG‑‑‑CATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTT                                            <  SRR4302547.5673181/94‑1 (MQ=60)
                                                    GCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCG‑‑CTCGCG‑‑CCG‑‑‑CATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTT                                            >  SRR4302547.5948401/1‑94 (MQ=60)
                                                    GCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCG‑‑CTCGCG‑‑CCG‑‑‑CATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTT                                            >  SRR4302547.2172769/1‑94 (MQ=60)
                                                    GCTATGCCTGATGCCGATTCGTAGGCAGGATAAGGCG‑‑CTCGCG‑‑CCG‑‑‑CATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTT                                            <  SRR4302547.2648825/94‑1 (MQ=60)
                                                     CTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCG‑‑CTCGCG‑‑CCG‑‑‑CATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTA                                           >  SRR4302547.5033871/1‑94 (MQ=60)
                                                     CTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCG‑‑CTCGCG‑‑CCG‑‑‑CATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTA                                           >  SRR4302547.5033872/1‑94 (MQ=60)
                                                     CTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCG‑‑CTCGCG‑‑CCG‑‑‑CATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTA                                           >  SRR4302547.2282424/1‑94 (MQ=60)
                                                     CTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCG‑‑CTCGCG‑‑CCG‑‑‑CATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTA                                           >  SRR4302547.610579/1‑94 (MQ=60)
                                                     CTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCG‑‑CTCGCG‑‑CCG‑‑‑CATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTA                                           <  SRR4302547.5554935/94‑1 (MQ=60)
                                                     CTAGGCCTGATGCCGATTCGTGGGCCGAATAGGGCG‑‑CTCGCG‑‑CCG‑‑‑CATCCGGCGATGGTCCACTGAAGCCTGATGCGACGCTTACCGCGTCTTA                                           <  SRR4302547.1507300/94‑1 (MQ=52)
                                                      TATGCCTGATGCCGATTCGTAGGCCGGATAAGGCG‑‑CTCGCG‑‑CCG‑‑‑CATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTAT                                          >  SRR4302547.284974/1‑94 (MQ=60)
                                                      TATGCCTGATGCCGATTCGTAGGCCGGATAAGGCG‑‑CTCGCG‑‑CCG‑‑‑CATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTAT                                          >  SRR4302547.1705170/1‑94 (MQ=60)
                                                        TGCCTGATGCCGATTCGTAGGCCGGATAAGGCG‑‑CTCGCG‑‑CCG‑‑‑CATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCA                                        >  SRR4302547.6411653/1‑94 (MQ=60)
                                                         GCCTGATGCCGATTCGTAGGCCGGATAAGGCG‑‑CTCGCG‑‑CCG‑‑‑CATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCAT                                       >  SRR4302547.1575983/1‑94 (MQ=60)
                                                          CCTGATGCCGATTCGTAGGCCGGATAAGGCG‑‑CTCGCG‑‑CCG‑‑‑CATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATG                                      >  SRR4302547.4333713/1‑94 (MQ=60)
                                                          CCTGATGCCGATTCGTAGGCCGGATAAGGCG‑‑CTCGCG‑‑CCG‑‑‑CATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATG                                      >  SRR4302547.3860124/1‑94 (MQ=60)
                                                          CCTGATGCCGATTCGTAGGCCGGATAAGGCG‑‑CTCGCG‑‑CCG‑‑‑CATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATG                                      <  SRR4302547.777092/94‑1 (MQ=60)
                                                          CCTGATGCCGATTCGTAGCCCGGATAAGGCG‑‑CTCGCG‑‑CCG‑‑‑CATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATG                                      <  SRR4302547.313038/94‑1 (MQ=60)
                                                           CTGATGCCTATGCGTAGGCGGGATAAGGCG‑‑CTCGCG‑‑CCG‑‑‑CATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGC                                     <  SRR4302547.1681849/94‑1 (MQ=60)
                                                            TGATGCCGATTCGTAGGCCGGATAAGGCG‑‑CTCGCG‑‑CCG‑‑‑CATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCC                                    >  SRR4302547.2072822/1‑94 (MQ=60)
                                                            TGATGCCGATTCGTAGGCCGGATAAGGCG‑‑CTCGCG‑‑CCG‑‑‑CATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCC                                    <  SRR4302547.3754574/94‑1 (MQ=60)
                                                             GATGCCGATTCGTAGGCCGGATAAGGCG‑‑CTCGCG‑‑CCG‑‑‑CATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCT                                   <  SRR4302547.1641731/94‑1 (MQ=60)
                                                              ATGCCGATTCGTAGGCCGGATAAGGCG‑‑CTCGCG‑‑CCG‑‑‑CATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTA                                  >  SRR4302547.1851658/1‑94 (MQ=60)
                                                              ATGCCGATTCGTAGGCCGGATAAGGCG‑‑CTCGCG‑‑CCG‑‑‑CATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTA                                  >  SRR4302547.6006445/1‑94 (MQ=60)
                                                               TGCCGATTCGTAGGCCGGATAAGGCG‑‑CTCGCG‑‑CCG‑‑‑CATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTAC                                 >  SRR4302547.6523368/1‑94 (MQ=60)
                                                                GCCGATTCGTAGGCCGGATAAGGCG‑‑CTCGCG‑‑CCG‑‑‑CATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACT                                >  SRR4302547.54998/1‑94 (MQ=60)
                                                                 CGGATTCGTAGGCCGGATAAGGCGCCCG‑‑CG‑‑CCG‑‑‑CATCGGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTG                               <  SRR4302547.4629440/94‑1 (MQ=60)
                                                                 CCGATTCGTAGGCCGGATAAGGCG‑‑CTCGCG‑‑CCG‑‑‑CATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTG                               <  SRR4302547.4368821/94‑1 (MQ=60)
                                                                 CCGATTCGTAGGCCGGATAAGGCG‑‑CTCGCG‑‑CCG‑‑‑CATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTG                               >  SRR4302547.5894306/1‑94 (MQ=60)
                                                                 CCGATTCGTAGGCCGGATAAGGCG‑‑CTCGCG‑‑CCG‑‑‑CATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTG                               >  SRR4302547.2383896/1‑94 (MQ=60)
                                                                  CGATTCGTAGGCCGGATAAGGCG‑‑CTCGCG‑‑CCG‑‑‑CATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGG                              >  SRR4302547.3346853/1‑94 (MQ=60)
                                                                  CGATTCGTAGGCCGGATAAGGCG‑‑CTCGCG‑‑CCG‑‑‑CATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGG                              >  SRR4302547.1524360/1‑94 (MQ=60)
                                                                   GATTCGTAGGCCGGATAAGGCG‑‑CTCGCG‑‑CCG‑‑‑CATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGG                             >  SRR4302547.4758147/1‑94 (MQ=60)
                                                                    ATTCGTAGGCCGGATAAGGCG‑‑CTCGCG‑‑CCG‑‑‑CATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGA                            >  SRR4302547.4572965/1‑94 (MQ=60)
                                                                     TTCGTAGGCCGGATAAGGCG‑‑CTCGCG‑‑CCG‑‑‑CATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAG                           >  SRR4302547.1295294/1‑94 (MQ=60)
                                                                     TTCGTAGGCCGGATAAGGCG‑‑CTCGCG‑‑CCG‑‑‑CATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAG                           >  SRR4302547.4157539/1‑94 (MQ=60)
                                                                     TTCGTAGGCCGGATAAGGCG‑‑CTCGCG‑‑CCG‑‑‑CATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAG                           >  SRR4302547.2893713/1‑94 (MQ=60)
                                                                      TCGTAGGCCGGATAAGGCG‑‑CTCGCG‑‑CCG‑‑‑CATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGC                          >  SRR4302547.2206805/1‑94 (MQ=60)
                                                                      TCGTAGGCCGGATAAGGCG‑‑CTCGCG‑‑CCG‑‑‑CATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGC                          >  SRR4302547.4758820/1‑94 (MQ=60)
                                                                      TCGTAGGCCGGATAAGGCG‑‑CTCGCG‑‑CCG‑‑‑CATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGC                          >  SRR4302547.5379744/1‑94 (MQ=60)
                                                                       CGTAGGCCGGATAAGGCG‑‑CTCGCG‑‑CCG‑‑‑CATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCA                         >  SRR4302547.2393525/1‑94 (MQ=60)
                                                                       CGTAGGCCGGATAAGGCG‑‑CTCGCG‑‑CCG‑‑‑CATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCA                         >  SRR4302547.4566161/1‑94 (MQ=60)
                                                                       CGTAGGCCGGATAAGGCG‑‑CTCGCG‑‑CCG‑‑‑CATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCA                         <  SRR4302547.6056039/94‑1 (MQ=60)
                                                                        GTAGGCCGGATAAGGCG‑‑CTCGCG‑‑CCG‑‑‑CATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCAC                        <  SRR4302547.2634507/94‑1 (MQ=60)
                                                                        GTAGGCCGGATAAGGCG‑‑CTCGCG‑‑CCG‑‑‑CATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCAC                        >  SRR4302547.3438937/1‑94 (MQ=60)
                                                                            GCCGGATAAGGCG‑‑CTCGCG‑‑CCG‑‑‑CATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCACGCTT                    <  SRR4302547.2942510/94‑1 (MQ=60)
                                                                              CGGATAAGGCG‑‑CTCGCG‑‑CCG‑‑‑CATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCACGCTTTA                  >  SRR4302547.4048894/1‑94 (MQ=60)
                                                                              CGGATAAGGCG‑‑CTCGCG‑‑CCG‑‑‑CATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCACGCTTTA                  <  SRR4302547.2814906/94‑1 (MQ=60)
                                                                              CGGATAAGGCG‑‑CTCGCG‑‑CCG‑‑‑CATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCACGCTTTA                  >  SRR4302547.4164808/1‑94 (MQ=60)
                                                                               GGATAAGGCG‑‑CTCGCG‑‑CCG‑‑‑CATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCACGCTTTAC                 >  SRR4302547.1137645/1‑94 (MQ=60)
                                                                               GGATAAGGCG‑‑CTCGCG‑‑CCG‑‑‑CATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCACGCTTTAC                 >  SRR4302547.4444490/1‑94 (MQ=60)
                                                                                 ATAAGGCG‑‑CTCGCG‑‑CCG‑‑‑CATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCACGCTTTACAC               >  SRR4302547.3749669/1‑94 (MQ=60)
                                                                                  TAAGGCG‑‑CTCGCG‑‑CCG‑‑‑CATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCACGCTTTACACC              <  SRR4302547.2335562/94‑1 (MQ=60)
                                                                                   AAGGCG‑‑CTCGCG‑‑CCG‑‑‑CATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCACGCTTTACACCG             >  SRR4302547.6339740/1‑94 (MQ=60)
                                                                                   AAGGCG‑‑CTCGCG‑‑CCG‑‑‑CATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCACGCTTTACACCG             >  SRR4302547.5892114/1‑94 (MQ=60)
                                                                                   AAGGCG‑‑CTCGCG‑‑CCG‑‑‑CATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCACGCTTTACACCG             >  SRR4302547.5259473/1‑94 (MQ=60)
                                                                                     GGCG‑‑CTCGCG‑‑CCG‑‑‑CATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCACGCTTTACACCGGG           <  SRR4302547.748969/94‑1 (MQ=60)
                                                                                               CG‑‑CCG‑‑‑CATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCACGCTTTACACCGGGGGAAACCA   >  SRR4302547.5260844/1‑94 (MQ=60)
                                                                                               CG‑‑CCG‑‑‑CATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCACGCTTTACACCGGGGGAAACCA   >  SRR4302547.4880251/1‑94 (MQ=60)
                                                                                                G‑‑CCG‑‑‑CATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCACGCTTTACACCGGGGGAAACCAT  >  SRR4302547.5097626/1‑94 (MQ=60)
                                                                                                |                                                                                                  
ATACCGCAAAAGAAGAATTAGAGAAGAAGAAAAATATGGGGTATTGAGGGTTGCTATGCCTGATGCCGATTCGTAGGCCGGATAAGGCG‑‑CT‑‑CG‑‑GCG‑‑‑CATCCGGCGATGGTGCACTGAAGCCTGATGCGACGCTTACCGCGTCTTATCATGCCTACTGGGAGCACGCTTTACACCGGGGGAAACCAT  >  NC_000913/4448449‑4448634

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑