Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 343 268.7 10873516 97.0% 10547310 150.6

Breseq alignment

N/A

GATK/CNVnator alignment

BRESEQ :: bam2aln output
ATGAAAGCTACATTACCTCATGTGCCAGCCTGAACTACTGCTACATGGGTGAAGAGCGCAATGTAAGCGCTACGGTCAGCTATCAGTTCTAACCGATATTGAAACCCGTGAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGTTTTGCGAAATGAATCTTGACGATGACCTACTCTCACATGGGGAAACCCCACACTACCATCGGCGATGCATCGTTTCACTACTGAGTTCGGGATGGGATCAGGTGGTTCCAATGCTCTATGGTCGTCAAGAAATTCTGTTGCCAGAATGTCCAGAT  >  CP009974/1915020‑1915320
                                                                                                                                                      |                                                                                                                                                      
ATGAAAGCTACATTACCTCATGTGCCAGCCTGAACTACTGCTACATGGGTGAAGAGCGCAATGTAAGCGCTACGGTCAGCTATCAGTTCTAACTGATATTGAAACCCGTGAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTGG                                                                                                                                                        <  SRR10918230.642984/151‑1 (MQ=60)
ATGAAAGCTACATTACCTCATGTGCCAGCCTGAACTACTGCTACATGGGTGAAGAGCGCAATGTAAGCGCTACGGTCAGCTATCAGTTCTAACCGATATTGAAACCCGTGAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTGG                                                                                                                                                        >  SRR10918230.2560282/1‑151 (MQ=60)
 TGAAAGCTACATTACCTCATGTGCCAGCCTGAACTACTGCTACATGGGTGAAGAGCGCAATGTAAGCGCTACGGTCAGCTATCAGTTCTAACCGATATTGAAACCCGTGAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTGGG                                                                                                                                                       <  SRR10918230.3296407/151‑1 (MQ=60)
                 TCATGTGCCAGCCTGAACTACTGCTACATGGGTGAAGAGCGCAATGTAAGCGCTACGGTCAGCTATCAGTTCTAACCGATATTGAAACCCGTGAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGAT                                                                                                                                      <  SRR10918230.421314/151‑1 (MQ=60)
                   ATGTGCCAGCCTGAACTACTGCTACATGGGTGAAGAGCGCAATGTAAGCGCTACGGTCAGCTATCAGTTCTAACCGATATTGAAACCCGTGAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGA                                                                                                                                    >  SRR10918230.3428897/1‑151 (MQ=60)
                    TGTGCCAGCCTGAACTACTGCTACATGGGTGAAGAGCGCAATGTAAGCGCTACGGTCAGCTATCAGTTCTAACCGATATTGAAACCCGTGAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGAC                                                                                                                                   >  SRR10918230.665927/1‑151 (MQ=60)
                    TGTGCCAGCCTGAACTACTGCTACATGGGTGAAGAGCGCAATGTAAGCGCTACGGTCAGCTATCAGTTCTAACCGATATTGAAACCCGTGAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGAC                                                                                                                                   <  SRR10918230.3375891/151‑1 (MQ=60)
                        CCAGCCTGAACTACTGCTACATGGGTGAAGAGCGCAATGTAAGCGCTACGGTCAGCTATCAGTTCTAACCGATATTGAAACCCGTGAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTAC                                                                                                                               >  SRR10918230.3289651/1‑151 (MQ=60)
                        CCAGCCTGAACTACTGCTACATGGGTGAAGAGCGCAATGTAAGCGCTACGGTCAGCTATCAGTTCTAACCGATATTGAAACCCGTGAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTAC                                                                                                                               <  SRR10918230.1321873/151‑1 (MQ=60)
                        CCAGCCTGAACTACTGCTACATGGGTGAAGAGCGCAATGTAAGCGCTACGGTCAGCTATCAGTTCTAACCGATATTGAAACCCGTGAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACATAC                                                                                                                               <  SRR10918230.3614005/151‑1 (MQ=60)
                         CAGCCTGAACTACTGCTACATGGGTGAAGAGCGCAATGTAAGCGCTACGGTCAGCTATCAGTTCTAACCGATATTGAAACCCGTGAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTACT                                                                                                                              >  SRR10918230.2621814/1‑151 (MQ=60)
                           GCCTGAACTACTGCTACATGGGTGAAGAGCGCAATGTAAGCGCTACGGTCAGCTATCAGTTCTAACCGATATTGAAACCCGTGAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTACTCT                                                                                                                            <  SRR10918230.3620698/151‑1 (MQ=60)
                             CTGAACTACTGCTACATGGGTGAAGAGCGCAATGTAAGCGCTACGGTCAGCTATCAGTTCTAACCGATATTGAAACCCGTGAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTACTCTCA                                                                                                                          <  SRR10918230.3585411/151‑1 (MQ=60)
                              TGAACTACTGCTACATGGGTGAAGAGCGCAATGTAAGCGCTACGGTCAGCTATCAGTTCTAACCGATATTGAAACCCGTGAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTACTCTCAC                                                                                                                         >  SRR10918230.3581512/1‑151 (MQ=60)
                                AACTACTGCTACATGGGTGAAGAGCGCAATGTAAGCGCTACGGTCAGCTATCAGTTCTAACCGATATTGAAACCCGTGAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTACTCTCACAT                                                                                                                       <  SRR10918230.2213759/151‑1 (MQ=60)
                                 ACTACTGCTACATGGGTGAAGAGCGCAATGTAAGCGCTACGGTCAGCTATCAGTTCTAACCGATATTGAAACCCGTGAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTACTCTCACATG                                                                                                                      >  SRR10918230.1250101/1‑151 (MQ=60)
                                 ACTACTGCTACATGGGTGAAGAGCGCAATGTAAGCGCTACGGTCAGCTATCAGTTCTAACCGATATTGAAACCCGTGAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTACTCTCACATG                                                                                                                      >  SRR10918230.2080615/1‑151 (MQ=60)
                                  CTACTGCTACATGGGTGAAGAGCGCAATGTAAGCGCTACGGTCAGCTATCAGTTCTAACCGATATTGAAACCCGTGAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTACTCTCACATGG                                                                                                                     <  SRR10918230.306456/151‑1 (MQ=60)
                                   TACTGCTACATGGGTGAAGAGCGCAATGTAAGCGCTACGGTCAGCTATCAGTTCTAACCGATATTGAAACCCGTGAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTACTCTCACATGGG                                                                                                                    <  SRR10918230.3009431/151‑1 (MQ=60)
                                    ACTGCTACATGGGTGAAGAGCGCAATGTAAGCGCTACGGTCAGCTATCAGTTCTAACCGATATTGAAACCCGTGAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTACTCTCACATGGGG                                                                                                                   >  SRR10918230.521039/1‑151 (MQ=60)
                                      TGCTACATGGGTGAAGAGCGCAATGTAAGCGCTACGGTCAGCTATCAGTTCTAACCGATATTGAAACCCGTGAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTACTCTCACATGGGGAA                                                                                                                 <  SRR10918230.1020437/151‑1 (MQ=60)
                                      TGCTACATGGGTGAAGAGCGCAATGTAAGCGCTACGGTCAGCTATCAGTTCTAACCGATATTGAAACCCGTGAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTACTCTCACATGGGGAA                                                                                                                 <  SRR10918230.1021163/151‑1 (MQ=60)
                                       GCTACATGGGTGAAGAGCGCAATGTAAGCGCTACGGTCAGCTATCAGTTCTAACCGATATTGAAACCCGTGAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTACTCTCACATGGGGAAA                                                                                                                >  SRR10918230.653928/1‑151 (MQ=60)
                                       GCTACATGGGTGAAGAGCGCAATGTAAGCGCTACGGTCAGCTATCAGTTCTAACCGATATTGAAACCCGTGAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTACTCTCACATGGGGAAA                                                                                                                >  SRR10918230.3277626/1‑151 (MQ=60)
                                       GCTACATGGGTGAAGAGCGCAATGTAAGCGCTACGGTCAGCTATCAGTTCTAACCGATATTGAAACCCGTGAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTACTCTCACATGGGGAAA                                                                                                                >  SRR10918230.3276878/1‑151 (MQ=60)
                                       GCTACATGGGTGAAGAGCGCAATGTAAGCGCTACGGTCAGCTATCAGTTCTAACCGATATTGAAACCCGTGAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTACTCTCACATGGGGAAA                                                                                                                >  SRR10918230.1679754/1‑151 (MQ=60)
                                          ACATGGGTGAAGAGCGCAATGTAAGCGCTACGGTCAGCTATCAGTTCTAACCGATATTGAAACCCGTGAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTACTCTCACATGGGGAAACCC                                                                                                             >  SRR10918230.2162411/1‑151 (MQ=60)
                                           CATGGGTGAAGAGCGCAATGTAAGCGCTACGGTCAGCTATCAGTTCTAACCGATATTGAAACCCGTGAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTACTCTCACATGGGGAAACCCC                                                                                                            >  SRR10918230.3426045/1‑151 (MQ=60)
                                                GTGAAGAGCGCAATGTAAGCGCTACGGTCAGCTATCAGTTCTAACCGATATTGAAACCCGTGAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTACTCTCACATGGGGAAACCCCACACT                                                                                                       <  SRR10918230.3126832/151‑1 (MQ=60)
                                                GTGAAGAGCGCAATGTAAGCGCTACGGTCAGCTATCAGTACTAACAGATATTGAAACCAGTAAAAAACAGAGCACCTATCTGAATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTACTCTCACATGGGGAAACCCCACACT                                                                                                       <  SRR10918230.341148/151‑1 (MQ=49)
                                                 TGAAGAGCGCAATGTAAGCGCTACGGTCAGCTATCAGTTCTAACCGATATTGAAACCCGTGAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTACTCTCACATGGGGAAACCCCACACTA                                                                                                      >  SRR10918230.5023562/1‑151 (MQ=60)
                                                  GAAGAGCGCAATGTAAGCGCTACGGTCAGCTATCAGTTCTAACCGATATTGAAACCCGTGAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTACTCTCACATGGGGAAACCCCACACTAC                                                                                                     >  SRR10918230.2656288/1‑151 (MQ=60)
                                                    AGAGCGCAATGTAAGCGCTACGGTCAGCTATCAGTTCTAACCGATATTGAAACCCGTGAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTACTCTCACATGGGGAAACCCCACACTACCA                                                                                                   <  SRR10918230.364574/151‑1 (MQ=60)
                                                    AGAGCGCAATGTAAGCGCTACGGTCAGCTATCAGTTCTAACCGATATTGAAACCCGTGAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTACTCTCACATGGGGAAACCCCACACTACCA                                                                                                   <  SRR10918230.1228949/151‑1 (MQ=60)
                                                    AGAGCGCAATGTAAGCGCTACGGTCAGCTATCAGTTCTAACCGATATTGAAACCCGTGAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTACTCTCACATGGGGAAACCCCACACTACCA                                                                                                   <  SRR10918230.1229003/151‑1 (MQ=60)
                                                       GCGCAATGTAAGCGCTACGGTCAGCTATCAGTTCTAACCGATATTGAAACCCGTGAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTACTCTCACATGGGGAAACCCCACCCTACCATCG                                                                                                >  SRR10918230.3706612/1‑151 (MQ=60)
                                                         GCAATGTAAGCGCTACGGTCAGCTATCAGTTCTAACCGATATTGAAACCCGTGAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTACTCTCACATGGGGAAACCCCACACTACCATCGGC                                                                                              <  SRR10918230.4917673/151‑1 (MQ=60)
                                                          CAATGTAAGCGCTACGGTCAGCTATCAGTTCTAACCGATATTGAAACCCGTGAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATTACCTACTCTCACATGGGGAAACCCCACACTACCATCGGCG                                                                                             >  SRR10918230.5460065/1‑151 (MQ=60)
                                                           AATGTAAGCGCTACGGTCAGCTATCAGTTCTAACCGATATTGAAACCCGTGAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTACTCTCACATGGGGAAACCCCACACTACCATCGGCGA                                                                                            <  SRR10918230.2990073/151‑1 (MQ=60)
                                                            ATGTAAGCGCTACGGTCAGCTATCAGTTCTAACCGATATTGAAACCCGTGAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTACTCTCACATGGGGAAACCCCACACTACCATCGGCGAT                                                                                           >  SRR10918230.2960831/1‑151 (MQ=60)
                                                            ATGTAAGCGCTACGGTCAGCTATCAGTTCTAACCGATATTGAAACCCGTGAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTACTCTCACATGGGGAAACCCCACACTACCATCGGCGAT                                                                                           <  SRR10918230.2676893/151‑1 (MQ=60)
                                                            ATGTAAGCGCTACGGTCAGCTATCAGTTCTAACCGATATTGAAACCCGTGAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTACTCTCACATGGGGAAACCCCACACTACCATCGGCGAT                                                                                           <  SRR10918230.4276306/151‑1 (MQ=60)
                                                            ATGTAAGCGCTACGGTCAGCTATCAGTTCTAACCGATAGTGAAACCCGTGAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTACTCTCACATGGGGAAACCCCACACTACCATCGGCGAT                                                                                           >  SRR10918230.3451315/1‑151 (MQ=60)
                                                              GTAAGCGCTACGGTCAGCTATCAGTTCTAACCGATATTGAAACCCGTGAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTACTCTCACATGGGGAAACCCCACACTACCATCGGCGATGC                                                                                         <  SRR10918230.2164151/151‑1 (MQ=60)
                                                              GTAAGCGCTACGGTCAGCTATCAGTTCTAACCGATATTGAAACCCGTGAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTACTCTCACATGGGGAAACCCCACACTACCATCGGCGATGC                                                                                         <  SRR10918230.550862/151‑1 (MQ=60)
                                                              GTAAGCGCTACGGTCAGCTATCAGTTCTAACCGATATTGAAACCCGTGAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTACTCTCACATGGGGAAACCCCACACTACCATCGGCGATGC                                                                                         <  SRR10918230.4609776/151‑1 (MQ=60)
                                                              GTAAGCGCTACGGTCAGCTATCAGTTCTAACCGATATTGAAACCCGTGAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGATGTG‑GGTTTGAAGCTTGACGATGACCTACTCTCACATGGGGAAACCCCAAACTACCATCGGCGATGC                                                                                         >  SRR10918230.534469/1‑151 (MQ=60)
                                                               TAAGCGCTAAGGTCAGCTATCAGTTCTAACCGATATTGAAACCCGTGAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTACTCTCACATGGGGAAACCCCACACTACCATCGGCGATGCA                                                                                        <  SRR10918230.4990427/151‑1 (MQ=60)
                                                                AAGCGCTACGGTCAGCTATCAGTTCTAACCGATATTGAAACCCGTGAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTACTCTCACATGGGGAAACCCCACACTACCATCGGCGATGCAT                                                                                       <  SRR10918230.3302410/151‑1 (MQ=60)
                                                                AACCGCTACGGTCAGCTATCAGTTCTAACCGATATTGAAACCCGTGAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTACTCTCACATGGGGAAACCCCACACTACCATCGGCGATGCAT                                                                                       <  SRR10918230.3315895/151‑1 (MQ=60)
                                                                 AGCGCTACGGTCAGCTATCAGTTCTAACCGATATTGAAACCCGTGAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTACTCTCACATGGGGAAACCCCACACTACCATCGGCGATGCATC                                                                                      <  SRR10918230.1214648/151‑1 (MQ=60)
                                                                 AGCGCTACGGTCAGCTATCAGTTCTAACCGATATTGAAACCCGTGAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTACTCTCACATGGGGAAACCCCACACTACCATCGGCGATGCATC                                                                                      <  SRR10918230.1090889/151‑1 (MQ=60)
                                                                 AGCGCTACGGTCAGCTATCAGTTCTAACCGATATTGAAACCCGTGAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTACTCTCACATGGGGAAACCCCACACTACCATCGGCGATGCATC                                                                                      <  SRR10918230.2470596/151‑1 (MQ=60)
                                                                  GCGCTACGGTCAGCTATCAGTTCTAACCGATATTGAAACCCGTGAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTACTCTCACATGGGGCAACCCCACACTACCATCGGCGATCCATCG                                                                                     >  SRR10918230.5426645/1‑151 (MQ=60)
                                                                    GCTACGGTCAGCTATCAGTTCTAACCGATATTGAAACCCGTGAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTACTCTCACATGGGGAAACCCCACACTACCATCGGCGATGCATCGTT                                                                                   >  SRR10918230.2359316/1‑151 (MQ=60)
                                                                      TACGGTCAGCTATCAGTTCTAACCGATATTGAAACCCGTGAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTACTCTCACATGGGGAAACCCCACACTACCATCGGCGATGCATCGTTTC                                                                                 >  SRR10918230.2770285/1‑151 (MQ=60)
                                                                         GGTCAGCTATCAGTTCTAACCGATATTGAAACCCGTGAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTACTCTCACATGGGGAAACCCCACACTACCATCGGCGATGCATCGTTTCACT                                                                              >  SRR10918230.2678735/1‑151 (MQ=60)
                                                                          GTCAGCTATCAGTTCTAACCGATATTGAAACCCGTGAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTACTCTCACATGGGGAAACCCCACACTACCATCGGCGATGCATCGTTTCACTG                                                                             >  SRR10918230.2725465/1‑151 (MQ=60)
                                                                           TCAGCTATCAGTTCTAACCGATATTGAAACCCGTGAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTACTCTCACATGGGGAAACCCCACACTACCATCGGCGATGCATCGagtcaatac                                                                            >  SRR10918230.14799/1‑142 (MQ=60)
                                                                           TCAGCTATCAGTTCTAACCGATATTGAAACCCGTGAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTACTCTCACATGGGGAAACCCCACACTACCATCGGCGATGCATCGTTTCACTGC                                                                            <  SRR10918230.4066042/151‑1 (MQ=60)
                                                                            CAGCTATCAGTTCTAACCGATATTGAAACCCGTGAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTACTCTCACATGGGGAAACCCCACACTACCATCGGCGATGCATCGTTTCACTGCT                                                                           <  SRR10918230.3390619/151‑1 (MQ=60)
                                                                            CAGCTATCAGTTCTAACCGATATTGAAACCCGTGAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTACTCTCACATGGGGAAACCCCACACTACCATCGGCGATGCATCGTTTCACTGCT                                                                           <  SRR10918230.4592868/151‑1 (MQ=60)
                                                                              GCTATCAGTTCTAACCGATATTGAAACCCGTGAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTACTCTCACATGGGGAAACCCCACACTACCATCGGCGATGCATCGTTTCACTGCTGA                                                                         <  SRR10918230.3561017/151‑1 (MQ=60)
                                                                               CTATCAGTTCTAACCGATATTGAAACCCGTGAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTACTCTCACATGGGGAAACCCCACACTACCATCGGCGATGCATCGTTTCACTGCTGAG                                                                        <  SRR10918230.2091605/151‑1 (MQ=60)
                                                                                TATCAGTTCTAACCGATATTGAAACCCGTGAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTACTCTCACATGGGGAAACCCCACACTACCATCGGCGATGCATCGTTTCACTGCTGAGT                                                                       <  SRR10918230.2696840/151‑1 (MQ=60)
                                                                                  TCAGTTCTAACCGATATTGAAACCCGTGAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTACTCTCACATGGGGAAACCCCACACTACCATCGGCGATGCATCGTTTCACTGCTGAGTTC                                                                     <  SRR10918230.3948515/151‑1 (MQ=60)
                                                                                  TCAGTTCTAACCGATATTGAAACCCGTGAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTACTCTCACATGGGGAAACCCCACACTACCATCGGCGATGCATCGTTTCACTGCTGAGTTC                                                                     <  SRR10918230.1324202/151‑1 (MQ=60)
                                                                                   CAGTTCTAACCGATATTGAAACCCGTGAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTACTCTCACATGGGGAAACCCCACACTACCATCGGCGATGCATCGTTTCACTGCTGAGTTCG                                                                    >  SRR10918230.4961606/1‑151 (MQ=60)
                                                                                      TTCTAACCGATATTGAAACCCGTGAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTACTCTCACATGGGGAAACCCCACACTACCATCGGCGATGCATCGTTTCACTGCTGAGTTCGGGA                                                                 <  SRR10918230.1796239/151‑1 (MQ=60)
                                                                                       TCTAACCGATATTGAAACCCGTGAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTACTCTCACATGGGGAAACCCCACACTACCATCGGCGATGCATCGTTTCACTGCTGAGctcacgat                                                                >  SRR10918230.602516/1‑143 (MQ=60)
                                                                                        CTAACCGATATTGAAACCCGTGAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTACTCTCACATGGGGAAACCCCACACTACCATCGGCGATGCATCGTTTCACTGCTGAGTTCGGGATG                                                               >  SRR10918230.779571/1‑151 (MQ=60)
                                                                                          AACCGATATTGAAACCCGTGAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTACTCTCACATGGGGAAACCCCACACTACCATCGGCGATGCATCGTTTCACTGCTGAGTTCGGGATGGG                                                             >  SRR10918230.2370149/1‑151 (MQ=60)
                                                                                              GATATTGAAACCCGTGAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTACTCTCACATGGGGAAACCCCACACTACCATCGGCGATGCATCGTTTCACTGCTGAGTTCGGGATGGGATCA                                                         <  SRR10918230.3970476/151‑1 (MQ=59)
                                                                                               ATATTGAAACCCGTGAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTACTCTCACATGGGGAAACCCCACACTACCATCGGCGATGCATCGTTTCACTGCTGAGTTGGGGATGGGATCAG                                                        >  SRR10918230.1781457/1‑151 (MQ=56)
                                                                                                 ATTGAACCCCGTGAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTACTCTCACATGGGGAAACCCCACACTACCATCGGCGATGCATCGTTTCACTGCTGAGTTCGGGATGGGATCAGGT                                                      <  SRR10918230.4805842/151‑1 (MQ=44)
                                                                                                 ATTGAAACCCGTGAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTACTCTCACATGGGGAAACCCCACACTACCATCGGCGATGCATCGTTTCACTGCTGAGTTCGGGATGGGATCAGGT                                                      >  SRR10918230.4485342/1‑151 (MQ=54)
                                                                                                 ATTGAAACCCGTGAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTACTCTCACATGGGGAAACCCCACACTACCATCGGCGATGCATCGTTTCACTGCTGAGTTCGGGATGGGATCAGGT                                                      >  SRR10918230.1555980/1‑151 (MQ=54)
                                                                                                 ATTGAAACCCGTGAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTACTCTCACATGGGGAAACCCCACACTACCATCGGCGATGCATCGTTTCACTGCTGAGTTCGGGATGGGATCAGGT                                                      >  SRR10918230.162090/1‑151 (MQ=54)
                                                                                                    GAAACCCGTGAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTACTCTCACATGGGGAAACCCCACACTACCATCGGCGATGCATCGTTTCACTGCTGAGTTCGGGATGGGATCAGGTGGT                                                   <  SRR10918230.4892645/151‑1 (MQ=49)
                                                                                                      AACCCGTGAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTACTCTCACATGGGGAAACCCCACACTACCATCGGCGATGCATCGTTTCACTGCTGAGTTCGGGATGGGATCAGGTGGTTC                                                 <  SRR10918230.1647105/151‑1 (MQ=45)
                                                                                                        CCCGTGAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTACTCTCACATGGGGAAACCCCACACTACCATCGGCGATGCATCGTTTCACTGCTGAGTTCGGGATGGGATCAGGTGGTTCCA                                               <  SRR10918230.3421001/151‑1 (MQ=41)
                                                                                                             GAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTACTCTCACATGGGGAAACCCCACACTACCATCGGCGATGCATCGTTTCACTGCTGAGTTCGGGATGGGATCAGGTGGTgctcgtgcg                                          >  SRR10918230.911580/1‑142 (MQ=33)
                                                                                                             GAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTACTCTCACATGGGGAAACCCCACACTACCATCGGCGATGCATCGTTTCACTGCTGAGTTCGGGATGGGATCAGGTGGTTCCAATGCT                                          <  SRR10918230.4645458/151‑1 (MQ=32)
                                                                                                              AAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTACTCTCACATGGGGAAACCCCACACTACCATCGGCGATGCATCGTTTCACTGCTGAGTTCGGGATGGGATCAGGTGGTTCCAATGCTC                                         <  SRR10918230.2367684/151‑1 (MQ=31)
                                                                                                              AAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTACTCTCACATGGGGAAACCCCACACTACCATCGGCGATGCATCGTTTCACTGCTGAGTTCGGGATGGGATCAGGTGGTTCCAATGCTC                                         <  SRR10918230.2369281/151‑1 (MQ=31)
                                                                                                                  ACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTACTCTCACATGGGGAAACCCCACACTACCATCGGCGATGCATCGTTTCACTGCTGAGTTCGGGATGGGATCAGGTGGTTCCAATGCTCTATG                                     <  SRR10918230.4618512/151‑1 (MQ=23)
                                                                                                                    AAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTACTCTCACATGGGGAAACCCCACACTACCATCGGCGATGCATCGTTTCACTGCTGAGTTCGGGATGGGATCAGGTGGTTCCAATGCTCTATGGT                                   >  SRR10918230.5276978/1‑151 (MQ=20)
                                                                                                                     AAGCCCCTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTACTCTCACATGGGGAAACCCCACACTACCATCGGCGATGCATCGTTTCACTGCTGAGTTCGGGATGGGATCAGGTGGTTCCAATGCTCTATGGTC                                  <  SRR10918230.5226719/151‑1 (MQ=18)
                                                                                                                        CCCCTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTACTCTCACATGGGGAAACCCCACACTACCATCGGCGATGCATCGTTTCACTGCTGAGTTCGGGATGGGATCAGGTGGTTCCAATGCTCagttcggaag                               >  SRR10918230.1570279/1‑141 (MQ=5)
                                                                                                                         CCCTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTACTCTCACATGGGGAAACCCCACACTACCATCGGCGATGCATCGTTTCACTGCTGAGTTCGGGATGGGATCAGGTGGTTCCAATGCTCTATGGTCGTCA                              <  SRR10918230.672348/151‑1 (MQ=3)
                                                                                                                         CCCTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTACTCTCACATGGGGAAACCCCACACTACCATCGGCGATGCATCGTTTCACTGCTGAGTTCGGGATGAGATCAagtgcatccaatggtatatcagcgtca                              >  SRR10918230.197380/1‑124 (MQ=3)
                                                                                                                          CCTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTACTCTCACATGGGGAAACCCCACACTACCATCGGCGATGCATCGTTTCACTGCTGAGTTCGGGATGGGATCAGGTGGTTCCAATGCTCTATGGTCGTCAA                             >  SRR10918230.2831851/1‑151 (MQ=1)
                                                                                                                           CTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTACTCTCACATGGGGAAACCCCACACTACCATCGGCGATGCATCGTTTCACTGCTGAGTTCGGGATGGGATCAGGTGGTTCCAATGCTCTATGGTCGTCAAG                            <  SRR10918230.2235133/151‑1 (MQ=0)
                                                                                                                           CTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTACTCTCACATGGGGAAACCCCACACTACCATCGGCGATGCATCGTTTCACTGCTGAGTTCGGGATGGGATCAGGTGGTTCCAATGCTCTATGGTCGTCAAG                            >  SRR10918230.2927177/1‑151 (MQ=0)
                                                                                                                             GTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTACTCTCACATGGGGAAACCCCACACTACCATCGGCGATGCATCGTTTCACTGCTGAGTTCGGGATGGGATCAGGTGGTTCCAATGCTCTATGGTCGTCAAGAA                          <  SRR10918230.3032096/151‑1 (MQ=0)
                                                                                                                              TCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTACTCTCACATGGGGAAACCCCACACTACCATCGGCGATGCATCGTTTCACTGCTGAGTTCGGGATGGGATCAGGTGGTTCCAATGCTCTATGGTCGTCAAGAAA                         >  SRR10918230.3616664/1‑151 (MQ=0)
                                                                                                                                          ACAGGCGTTTTGCCAACTGAATCTTGACGATGACCTACTCTCACATGGGGAAACCCCACACTACCATCGGCGATGCATCGTTTCACTACTGAGTTCGGGATGGGATCAGGTGGTTCCAATGCTCTATGGTCGTCAAGAAATTCTGTTGCCA              <  SRR10918230.4001175/151‑1 (MQ=0)
                                                                                                                                             GGGGTTTTGCGAAATGAATCTTGACGATGACCTACTCTCACATGGGGAAACCCTACACTACCATCGGCGATGCATCGTTTCACTACTGAGTTCGGGATGGGATCAGGTGGTTCCAATGCTCTATGGTCGTCAAGAAATTCTGTTGCCAGAA           >  SRR10918230.4156799/1‑151 (MQ=0)
                                                                                                                                              GGGTTTTGCGAAATGAATCTTGACGATGACCTACTCTCACATGGGGAAACCCCACACTACCATCGGCGATGCATCGTTTCACTACTGAGTTCGGGATGGGATCAGGTGGTTCCAATGCTCTATGGTCGTCAAGAAATTCTGTTGCCAGAAT          >  SRR10918230.3401466/1‑151 (MQ=0)
                                                                                                                                              GGGTTTTGCGAAATGAATCTTGACGATGACCTACTCTCACATGGGGAAACCCCACACTACCATCGGCGATGCATCGTTTCACTACTGAGTTCGGGATGGGATCAGGTGGTTCCAATGCTCTATGGTCGTCAAGAAATTCTGTTGCCAGAAT          >  SRR10918230.3287552/1‑151 (MQ=0)
                                                                                                                                                GTTTTGCGAAATGAATCTTGACGATGACCTACTCTCACATGGGGAAACCCCACACTACCATCGGCGATGCATCGTTTCACTACTGAGTTCGGGATGGGATCAGGTGGTTCCAATGCTCTATGGTCGTCAAGAAATTCTGTTGCCAGAATGT        <  SRR10918230.2842275/151‑1 (MQ=0)
                                                                                                                                                 TTTTGCGAAATGAATCTTGACGATGACCTACTCTCACATGGGGAAACCCCACACTACCATCGGCGATGCATCGTTTCACTACTGAGTTCGGGATGGGATCAGGTGGTTCCAATGCTCTATGGTCGTCAAGAAATTCTGTTGCCAGAATGTC       <  SRR10918230.5080302/151‑1 (MQ=0)
                                                                                                                                                 TTTTGCGAAATGAATCTTGACGATGACCTACTCTCACATGGGGAAACCCCACACTACCATCGGCGATGCATCGTTTCACTACTGAGTTCGGGATGGGATCAGGTGGTTCCAATGCTCTATGGTCGTCAAGAAATTCTGTTGCCAGAATGTC       <  SRR10918230.4362808/151‑1 (MQ=0)
                                                                                                                                                  TTTGCGAAATGAATCTTGACGATGACCTACTCTCACATGGGGAAACCCCACACTACCATCGGCGATGCATCGTTTCACTACTGAGTTCGGGATGGGATCAGGTGGTTCCAATGCTCTATGGTCGTCAAGAAATTCTGTTGCCAGAATGTCC      <  SRR10918230.4678580/151‑1 (MQ=0)
                                                                                                                                                      CGAAATGAATCTTGACGATGACCTACTCTCACATGGGGAAACCCCACACTACCATCGGCGATGCATCGTTTCACTACTGAGTTCGGGATGGGATCAGGTGGTTCCAATGCTCTATGGTCGTCAAGAAATTCTGTTGCCAGAATGTCCAGAT  <  SRR10918230.4191031/151‑1 (MQ=0)
                                                                                                                                                      |                                                                                                                                                      
ATGAAAGCTACATTACCTCATGTGCCAGCCTGAACTACTGCTACATGGGTGAAGAGCGCAATGTAAGCGCTACGGTCAGCTATCAGTTCTAACCGATATTGAAACCCGTGAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGTTTTGCGAAATGAATCTTGACGATGACCTACTCTCACATGGGGAAACCCCACACTACCATCGGCGATGCATCGTTTCACTACTGAGTTCGGGATGGGATCAGGTGGTTCCAATGCTCTATGGTCGTCAAGAAATTCTGTTGCCAGAATGTCCAGAT  >  CP009974/1915020‑1915320

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑