Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I1 R1
|
343 |
268.7 |
10873516 |
97.0% |
10547310 |
150.6 |
Breseq alignment
N/A
GATK/CNVnator alignment
BRESEQ :: bam2aln output
TCATGTGCCAGCCTGAACTACTGCTACATGGGTGAAGAGCGCAATGTAAGCGCTACGGTCAGCTATCAGTTCTAACCGATATTGAAACCCGTGAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGTTTTGCGAAATGAATCTTGACGATGACCTACTCTCACATGGGGAAACCCCACACTACCATCGGCGATGCATCGTTTCACTACTGAGTTCGGGATGGGATCAGGTGGTTCCAATGCTCTATGGTCGTCAAGAAATTCTGTTGCCAGAATGTCCAGATG > CP009974/1915037‑1915321
|
TCATGTGCCAGCCTGAACTACTGCTACATGGGTGAAGAGCGCAATGTAAGCGCTACGGTCAGCTATCAGTTCTAACCGATATTGAAACCCGTGAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGAT < SRR10918230.421314/151‑1 (MQ=60)
ATGTGCCAGCCTGAACTACTGCTACATGGGTGAAGAGCGCAATGTAAGCGCTACGGTCAGCTATCAGTTCTAACCGATATTGAAACCCGTGAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGA > SRR10918230.3428897/1‑151 (MQ=60)
TGTGCCAGCCTGAACTACTGCTACATGGGTGAAGAGCGCAATGTAAGCGCTACGGTCAGCTATCAGTTCTAACCGATATTGAAACCCGTGAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGAC > SRR10918230.665927/1‑151 (MQ=60)
TGTGCCAGCCTGAACTACTGCTACATGGGTGAAGAGCGCAATGTAAGCGCTACGGTCAGCTATCAGTTCTAACCGATATTGAAACCCGTGAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGAC < SRR10918230.3375891/151‑1 (MQ=60)
CCAGCCTGAACTACTGCTACATGGGTGAAGAGCGCAATGTAAGCGCTACGGTCAGCTATCAGTTCTAACCGATATTGAAACCCGTGAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTAC > SRR10918230.3289651/1‑151 (MQ=60)
CCAGCCTGAACTACTGCTACATGGGTGAAGAGCGCAATGTAAGCGCTACGGTCAGCTATCAGTTCTAACCGATATTGAAACCCGTGAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTAC < SRR10918230.1321873/151‑1 (MQ=60)
CCAGCCTGAACTACTGCTACATGGGTGAAGAGCGCAATGTAAGCGCTACGGTCAGCTATCAGTTCTAACCGATATTGAAACCCGTGAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACATAC < SRR10918230.3614005/151‑1 (MQ=60)
CAGCCTGAACTACTGCTACATGGGTGAAGAGCGCAATGTAAGCGCTACGGTCAGCTATCAGTTCTAACCGATATTGAAACCCGTGAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTACT > SRR10918230.2621814/1‑151 (MQ=60)
GCCTGAACTACTGCTACATGGGTGAAGAGCGCAATGTAAGCGCTACGGTCAGCTATCAGTTCTAACCGATATTGAAACCCGTGAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTACTCT < SRR10918230.3620698/151‑1 (MQ=60)
CTGAACTACTGCTACATGGGTGAAGAGCGCAATGTAAGCGCTACGGTCAGCTATCAGTTCTAACCGATATTGAAACCCGTGAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTACTCTCA < SRR10918230.3585411/151‑1 (MQ=60)
TGAACTACTGCTACATGGGTGAAGAGCGCAATGTAAGCGCTACGGTCAGCTATCAGTTCTAACCGATATTGAAACCCGTGAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTACTCTCAC > SRR10918230.3581512/1‑151 (MQ=60)
AACTACTGCTACATGGGTGAAGAGCGCAATGTAAGCGCTACGGTCAGCTATCAGTTCTAACCGATATTGAAACCCGTGAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTACTCTCACAT < SRR10918230.2213759/151‑1 (MQ=60)
ACTACTGCTACATGGGTGAAGAGCGCAATGTAAGCGCTACGGTCAGCTATCAGTTCTAACCGATATTGAAACCCGTGAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTACTCTCACATG > SRR10918230.1250101/1‑151 (MQ=60)
ACTACTGCTACATGGGTGAAGAGCGCAATGTAAGCGCTACGGTCAGCTATCAGTTCTAACCGATATTGAAACCCGTGAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTACTCTCACATG > SRR10918230.2080615/1‑151 (MQ=60)
CTACTGCTACATGGGTGAAGAGCGCAATGTAAGCGCTACGGTCAGCTATCAGTTCTAACCGATATTGAAACCCGTGAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTACTCTCACATGG < SRR10918230.306456/151‑1 (MQ=60)
TACTGCTACATGGGTGAAGAGCGCAATGTAAGCGCTACGGTCAGCTATCAGTTCTAACCGATATTGAAACCCGTGAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTACTCTCACATGGG < SRR10918230.3009431/151‑1 (MQ=60)
ACTGCTACATGGGTGAAGAGCGCAATGTAAGCGCTACGGTCAGCTATCAGTTCTAACCGATATTGAAACCCGTGAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTACTCTCACATGGGG > SRR10918230.521039/1‑151 (MQ=60)
TGCTACATGGGTGAAGAGCGCAATGTAAGCGCTACGGTCAGCTATCAGTTCTAACCGATATTGAAACCCGTGAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTACTCTCACATGGGGAA < SRR10918230.1021163/151‑1 (MQ=60)
TGCTACATGGGTGAAGAGCGCAATGTAAGCGCTACGGTCAGCTATCAGTTCTAACCGATATTGAAACCCGTGAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTACTCTCACATGGGGAA < SRR10918230.1020437/151‑1 (MQ=60)
GCTACATGGGTGAAGAGCGCAATGTAAGCGCTACGGTCAGCTATCAGTTCTAACCGATATTGAAACCCGTGAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTACTCTCACATGGGGAAA > SRR10918230.653928/1‑151 (MQ=60)
GCTACATGGGTGAAGAGCGCAATGTAAGCGCTACGGTCAGCTATCAGTTCTAACCGATATTGAAACCCGTGAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTACTCTCACATGGGGAAA > SRR10918230.1679754/1‑151 (MQ=60)
GCTACATGGGTGAAGAGCGCAATGTAAGCGCTACGGTCAGCTATCAGTTCTAACCGATATTGAAACCCGTGAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTACTCTCACATGGGGAAA > SRR10918230.3277626/1‑151 (MQ=60)
GCTACATGGGTGAAGAGCGCAATGTAAGCGCTACGGTCAGCTATCAGTTCTAACCGATATTGAAACCCGTGAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTACTCTCACATGGGGAAA > SRR10918230.3276878/1‑151 (MQ=60)
ACATGGGTGAAGAGCGCAATGTAAGCGCTACGGTCAGCTATCAGTTCTAACCGATATTGAAACCCGTGAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTACTCTCACATGGGGAAACCC > SRR10918230.2162411/1‑151 (MQ=60)
CATGGGTGAAGAGCGCAATGTAAGCGCTACGGTCAGCTATCAGTTCTAACCGATATTGAAACCCGTGAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTACTCTCACATGGGGAAACCCC > SRR10918230.3426045/1‑151 (MQ=60)
GTGAAGAGCGCAATGTAAGCGCTACGGTCAGCTATCAGTTCTAACCGATATTGAAACCCGTGAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTACTCTCACATGGGGAAACCCCACACT < SRR10918230.3126832/151‑1 (MQ=60)
GTGAAGAGCGCAATGTAAGCGCTACGGTCAGCTATCAGTACTAACAGATATTGAAACCAGTAAAAAACAGAGCACCTATCTGAATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTACTCTCACATGGGGAAACCCCACACT < SRR10918230.341148/151‑1 (MQ=49)
TGAAGAGCGCAATGTAAGCGCTACGGTCAGCTATCAGTTCTAACCGATATTGAAACCCGTGAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTACTCTCACATGGGGAAACCCCACACTA > SRR10918230.5023562/1‑151 (MQ=60)
GAAGAGCGCAATGTAAGCGCTACGGTCAGCTATCAGTTCTAACCGATATTGAAACCCGTGAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTACTCTCACATGGGGAAACCCCACACTAC > SRR10918230.2656288/1‑151 (MQ=60)
AGAGCGCAATGTAAGCGCTACGGTCAGCTATCAGTTCTAACCGATATTGAAACCCGTGAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTACTCTCACATGGGGAAACCCCACACTACCA < SRR10918230.1229003/151‑1 (MQ=60)
AGAGCGCAATGTAAGCGCTACGGTCAGCTATCAGTTCTAACCGATATTGAAACCCGTGAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTACTCTCACATGGGGAAACCCCACACTACCA < SRR10918230.1228949/151‑1 (MQ=60)
AGAGCGCAATGTAAGCGCTACGGTCAGCTATCAGTTCTAACCGATATTGAAACCCGTGAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTACTCTCACATGGGGAAACCCCACACTACCA < SRR10918230.364574/151‑1 (MQ=60)
GCGCAATGTAAGCGCTACGGTCAGCTATCAGTTCTAACCGATATTGAAACCCGTGAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTACTCTCACATGGGGAAACCCCACCCTACCATCG > SRR10918230.3706612/1‑151 (MQ=60)
GCAATGTAAGCGCTACGGTCAGCTATCAGTTCTAACCGATATTGAAACCCGTGAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTACTCTCACATGGGGAAACCCCACACTACCATCGGC < SRR10918230.4917673/151‑1 (MQ=60)
CAATGTAAGCGCTACGGTCAGCTATCAGTTCTAACCGATATTGAAACCCGTGAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATTACCTACTCTCACATGGGGAAACCCCACACTACCATCGGCG > SRR10918230.5460065/1‑151 (MQ=60)
AATGTAAGCGCTACGGTCAGCTATCAGTTCTAACCGATATTGAAACCCGTGAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTACTCTCACATGGGGAAACCCCACACTACCATCGGCGA < SRR10918230.2990073/151‑1 (MQ=60)
ATGTAAGCGCTACGGTCAGCTATCAGTTCTAACCGATATTGAAACCCGTGAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTACTCTCACATGGGGAAACCCCACACTACCATCGGCGAT > SRR10918230.2960831/1‑151 (MQ=60)
ATGTAAGCGCTACGGTCAGCTATCAGTTCTAACCGATATTGAAACCCGTGAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTACTCTCACATGGGGAAACCCCACACTACCATCGGCGAT < SRR10918230.4276306/151‑1 (MQ=60)
ATGTAAGCGCTACGGTCAGCTATCAGTTCTAACCGATATTGAAACCCGTGAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTACTCTCACATGGGGAAACCCCACACTACCATCGGCGAT < SRR10918230.2676893/151‑1 (MQ=60)
ATGTAAGCGCTACGGTCAGCTATCAGTTCTAACCGATAGTGAAACCCGTGAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTACTCTCACATGGGGAAACCCCACACTACCATCGGCGAT > SRR10918230.3451315/1‑151 (MQ=60)
GTAAGCGCTACGGTCAGCTATCAGTTCTAACCGATATTGAAACCCGTGAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTACTCTCACATGGGGAAACCCCACACTACCATCGGCGATGC < SRR10918230.4609776/151‑1 (MQ=60)
GTAAGCGCTACGGTCAGCTATCAGTTCTAACCGATATTGAAACCCGTGAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTACTCTCACATGGGGAAACCCCACACTACCATCGGCGATGC < SRR10918230.550862/151‑1 (MQ=60)
GTAAGCGCTACGGTCAGCTATCAGTTCTAACCGATATTGAAACCCGTGAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTACTCTCACATGGGGAAACCCCACACTACCATCGGCGATGC < SRR10918230.2164151/151‑1 (MQ=60)
GTAAGCGCTACGGTCAGCTATCAGTTCTAACCGATATTGAAACCCGTGAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGATGTG‑GGTTTGAAGCTTGACGATGACCTACTCTCACATGGGGAAACCCCAAACTACCATCGGCGATGC > SRR10918230.534469/1‑151 (MQ=60)
TAAGCGCTAAGGTCAGCTATCAGTTCTAACCGATATTGAAACCCGTGAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTACTCTCACATGGGGAAACCCCACACTACCATCGGCGATGCA < SRR10918230.4990427/151‑1 (MQ=60)
AAGCGCTACGGTCAGCTATCAGTTCTAACCGATATTGAAACCCGTGAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTACTCTCACATGGGGAAACCCCACACTACCATCGGCGATGCAT < SRR10918230.3302410/151‑1 (MQ=60)
AACCGCTACGGTCAGCTATCAGTTCTAACCGATATTGAAACCCGTGAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTACTCTCACATGGGGAAACCCCACACTACCATCGGCGATGCAT < SRR10918230.3315895/151‑1 (MQ=60)
AGCGCTACGGTCAGCTATCAGTTCTAACCGATATTGAAACCCGTGAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTACTCTCACATGGGGAAACCCCACACTACCATCGGCGATGCATC < SRR10918230.1214648/151‑1 (MQ=60)
AGCGCTACGGTCAGCTATCAGTTCTAACCGATATTGAAACCCGTGAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTACTCTCACATGGGGAAACCCCACACTACCATCGGCGATGCATC < SRR10918230.2470596/151‑1 (MQ=60)
AGCGCTACGGTCAGCTATCAGTTCTAACCGATATTGAAACCCGTGAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTACTCTCACATGGGGAAACCCCACACTACCATCGGCGATGCATC < SRR10918230.1090889/151‑1 (MQ=60)
GCGCTACGGTCAGCTATCAGTTCTAACCGATATTGAAACCCGTGAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTACTCTCACATGGGGCAACCCCACACTACCATCGGCGATCCATCG > SRR10918230.5426645/1‑151 (MQ=60)
GCTACGGTCAGCTATCAGTTCTAACCGATATTGAAACCCGTGAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTACTCTCACATGGGGAAACCCCACACTACCATCGGCGATGCATCGTT > SRR10918230.2359316/1‑151 (MQ=60)
TACGGTCAGCTATCAGTTCTAACCGATATTGAAACCCGTGAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTACTCTCACATGGGGAAACCCCACACTACCATCGGCGATGCATCGTTTC > SRR10918230.2770285/1‑151 (MQ=60)
GGTCAGCTATCAGTTCTAACCGATATTGAAACCCGTGAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTACTCTCACATGGGGAAACCCCACACTACCATCGGCGATGCATCGTTTCACT > SRR10918230.2678735/1‑151 (MQ=60)
GTCAGCTATCAGTTCTAACCGATATTGAAACCCGTGAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTACTCTCACATGGGGAAACCCCACACTACCATCGGCGATGCATCGTTTCACTG > SRR10918230.2725465/1‑151 (MQ=60)
TCAGCTATCAGTTCTAACCGATATTGAAACCCGTGAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTACTCTCACATGGGGAAACCCCACACTACCATCGGCGATGCATCGagtcaatac > SRR10918230.14799/1‑142 (MQ=60)
TCAGCTATCAGTTCTAACCGATATTGAAACCCGTGAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTACTCTCACATGGGGAAACCCCACACTACCATCGGCGATGCATCGTTTCACTGC < SRR10918230.4066042/151‑1 (MQ=60)
CAGCTATCAGTTCTAACCGATATTGAAACCCGTGAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTACTCTCACATGGGGAAACCCCACACTACCATCGGCGATGCATCGTTTCACTGCT < SRR10918230.3390619/151‑1 (MQ=60)
CAGCTATCAGTTCTAACCGATATTGAAACCCGTGAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTACTCTCACATGGGGAAACCCCACACTACCATCGGCGATGCATCGTTTCACTGCT < SRR10918230.4592868/151‑1 (MQ=60)
GCTATCAGTTCTAACCGATATTGAAACCCGTGAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTACTCTCACATGGGGAAACCCCACACTACCATCGGCGATGCATCGTTTCACTGCTGA < SRR10918230.3561017/151‑1 (MQ=60)
CTATCAGTTCTAACCGATATTGAAACCCGTGAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTACTCTCACATGGGGAAACCCCACACTACCATCGGCGATGCATCGTTTCACTGCTGAG < SRR10918230.2091605/151‑1 (MQ=60)
TATCAGTTCTAACCGATATTGAAACCCGTGAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTACTCTCACATGGGGAAACCCCACACTACCATCGGCGATGCATCGTTTCACTGCTGAGT < SRR10918230.2696840/151‑1 (MQ=60)
TCAGTTCTAACCGATATTGAAACCCGTGAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTACTCTCACATGGGGAAACCCCACACTACCATCGGCGATGCATCGTTTCACTGCTGAGTTC < SRR10918230.1324202/151‑1 (MQ=60)
TCAGTTCTAACCGATATTGAAACCCGTGAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTACTCTCACATGGGGAAACCCCACACTACCATCGGCGATGCATCGTTTCACTGCTGAGTTC < SRR10918230.3948515/151‑1 (MQ=60)
CAGTTCTAACCGATATTGAAACCCGTGAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTACTCTCACATGGGGAAACCCCACACTACCATCGGCGATGCATCGTTTCACTGCTGAGTTCG > SRR10918230.4961606/1‑151 (MQ=60)
TTCTAACCGATATTGAAACCCGTGAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTACTCTCACATGGGGAAACCCCACACTACCATCGGCGATGCATCGTTTCACTGCTGAGTTCGGGA < SRR10918230.1796239/151‑1 (MQ=60)
TCTAACCGATATTGAAACCCGTGAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTACTCTCACATGGGGAAACCCCACACTACCATCGGCGATGCATCGTTTCACTGCTGAGctcacgat > SRR10918230.602516/1‑143 (MQ=60)
CTAACCGATATTGAAACCCGTGAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTACTCTCACATGGGGAAACCCCACACTACCATCGGCGATGCATCGTTTCACTGCTGAGTTCGGGATG > SRR10918230.779571/1‑151 (MQ=60)
AACCGATATTGAAACCCGTGAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTACTCTCACATGGGGAAACCCCACACTACCATCGGCGATGCATCGTTTCACTGCTGAGTTCGGGATGGG > SRR10918230.2370149/1‑151 (MQ=60)
GATATTGAAACCCGTGAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTACTCTCACATGGGGAAACCCCACACTACCATCGGCGATGCATCGTTTCACTGCTGAGTTCGGGATGGGATCA < SRR10918230.3970476/151‑1 (MQ=59)
ATATTGAAACCCGTGAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTACTCTCACATGGGGAAACCCCACACTACCATCGGCGATGCATCGTTTCACTGCTGAGTTGGGGATGGGATCAG > SRR10918230.1781457/1‑151 (MQ=56)
ATTGAACCCCGTGAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTACTCTCACATGGGGAAACCCCACACTACCATCGGCGATGCATCGTTTCACTGCTGAGTTCGGGATGGGATCAGGT < SRR10918230.4805842/151‑1 (MQ=44)
ATTGAAACCCGTGAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTACTCTCACATGGGGAAACCCCACACTACCATCGGCGATGCATCGTTTCACTGCTGAGTTCGGGATGGGATCAGGT > SRR10918230.1555980/1‑151 (MQ=54)
ATTGAAACCCGTGAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTACTCTCACATGGGGAAACCCCACACTACCATCGGCGATGCATCGTTTCACTGCTGAGTTCGGGATGGGATCAGGT > SRR10918230.4485342/1‑151 (MQ=54)
ATTGAAACCCGTGAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTACTCTCACATGGGGAAACCCCACACTACCATCGGCGATGCATCGTTTCACTGCTGAGTTCGGGATGGGATCAGGT > SRR10918230.162090/1‑151 (MQ=54)
GAAACCCGTGAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTACTCTCACATGGGGAAACCCCACACTACCATCGGCGATGCATCGTTTCACTGCTGAGTTCGGGATGGGATCAGGTGGT < SRR10918230.4892645/151‑1 (MQ=49)
AACCCGTGAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTACTCTCACATGGGGAAACCCCACACTACCATCGGCGATGCATCGTTTCACTGCTGAGTTCGGGATGGGATCAGGTGGTTC < SRR10918230.1647105/151‑1 (MQ=45)
CCCGTGAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTACTCTCACATGGGGAAACCCCACACTACCATCGGCGATGCATCGTTTCACTGCTGAGTTCGGGATGGGATCAGGTGGTTCCA < SRR10918230.3421001/151‑1 (MQ=41)
GAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTACTCTCACATGGGGAAACCCCACACTACCATCGGCGATGCATCGTTTCACTGCTGAGTTCGGGATGGGATCAGGTGGTgctcgtgcg > SRR10918230.911580/1‑142 (MQ=33)
GAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTACTCTCACATGGGGAAACCCCACACTACCATCGGCGATGCATCGTTTCACTGCTGAGTTCGGGATGGGATCAGGTGGTTCCAATGCT < SRR10918230.4645458/151‑1 (MQ=32)
AAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTACTCTCACATGGGGAAACCCCACACTACCATCGGCGATGCATCGTTTCACTGCTGAGTTCGGGATGGGATCAGGTGGTTCCAATGCTC < SRR10918230.2367684/151‑1 (MQ=31)
AAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTACTCTCACATGGGGAAACCCCACACTACCATCGGCGATGCATCGTTTCACTGCTGAGTTCGGGATGGGATCAGGTGGTTCCAATGCTC < SRR10918230.2369281/151‑1 (MQ=31)
ACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTACTCTCACATGGGGAAACCCCACACTACCATCGGCGATGCATCGTTTCACTGCTGAGTTCGGGATGGGATCAGGTGGTTCCAATGCTCTATG < SRR10918230.4618512/151‑1 (MQ=23)
AAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTACTCTCACATGGGGAAACCCCACACTACCATCGGCGATGCATCGTTTCACTGCTGAGTTCGGGATGGGATCAGGTGGTTCCAATGCTCTATGGT > SRR10918230.5276978/1‑151 (MQ=20)
AAGCCCCTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTACTCTCACATGGGGAAACCCCACACTACCATCGGCGATGCATCGTTTCACTGCTGAGTTCGGGATGGGATCAGGTGGTTCCAATGCTCTATGGTC < SRR10918230.5226719/151‑1 (MQ=18)
CCCCTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTACTCTCACATGGGGAAACCCCACACTACCATCGGCGATGCATCGTTTCACTGCTGAGTTCGGGATGGGATCAGGTGGTTCCAATGCTCagttcggaag > SRR10918230.1570279/1‑141 (MQ=5)
CCCTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTACTCTCACATGGGGAAACCCCACACTACCATCGGCGATGCATCGTTTCACTGCTGAGTTCGGGATGGGATCAGGTGGTTCCAATGCTCTATGGTCGTCA < SRR10918230.672348/151‑1 (MQ=3)
CCCTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTACTCTCACATGGGGAAACCCCACACTACCATCGGCGATGCATCGTTTCACTGCTGAGTTCGGGATGAGATCAagtgcatccaatggtatatcagcgtca > SRR10918230.197380/1‑124 (MQ=3)
CCTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTACTCTCACATGGGGAAACCCCACACTACCATCGGCGATGCATCGTTTCACTGCTGAGTTCGGGATGGGATCAGGTGGTTCCAATGCTCTATGGTCGTCAA > SRR10918230.2831851/1‑151 (MQ=1)
CTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTACTCTCACATGGGGAAACCCCACACTACCATCGGCGATGCATCGTTTCACTGCTGAGTTCGGGATGGGATCAGGTGGTTCCAATGCTCTATGGTCGTCAAG > SRR10918230.2927177/1‑151 (MQ=0)
CTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTACTCTCACATGGGGAAACCCCACACTACCATCGGCGATGCATCGTTTCACTGCTGAGTTCGGGATGGGATCAGGTGGTTCCAATGCTCTATGGTCGTCAAG < SRR10918230.2235133/151‑1 (MQ=0)
GTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTACTCTCACATGGGGAAACCCCACACTACCATCGGCGATGCATCGTTTCACTGCTGAGTTCGGGATGGGATCAGGTGGTTCCAATGCTCTATGGTCGTCAAGAA < SRR10918230.3032096/151‑1 (MQ=0)
TCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTACTCTCACATGGGGAAACCCCACACTACCATCGGCGATGCATCGTTTCACTGCTGAGTTCGGGATGGGATCAGGTGGTTCCAATGCTCTATGGTCGTCAAGAAA > SRR10918230.3616664/1‑151 (MQ=0)
ACAGGCGTTTTGCCAACTGAATCTTGACGATGACCTACTCTCACATGGGGAAACCCCACACTACCATCGGCGATGCATCGTTTCACTACTGAGTTCGGGATGGGATCAGGTGGTTCCAATGCTCTATGGTCGTCAAGAAATTCTGTTGCCA < SRR10918230.4001175/151‑1 (MQ=0)
GGGGTTTTGCGAAATGAATCTTGACGATGACCTACTCTCACATGGGGAAACCCTACACTACCATCGGCGATGCATCGTTTCACTACTGAGTTCGGGATGGGATCAGGTGGTTCCAATGCTCTATGGTCGTCAAGAAATTCTGTTGCCAGAA > SRR10918230.4156799/1‑151 (MQ=0)
GGGTTTTGCGAAATGAATCTTGACGATGACCTACTCTCACATGGGGAAACCCCACACTACCATCGGCGATGCATCGTTTCACTACTGAGTTCGGGATGGGATCAGGTGGTTCCAATGCTCTATGGTCGTCAAGAAATTCTGTTGCCAGAAT > SRR10918230.3401466/1‑151 (MQ=0)
GGGTTTTGCGAAATGAATCTTGACGATGACCTACTCTCACATGGGGAAACCCCACACTACCATCGGCGATGCATCGTTTCACTACTGAGTTCGGGATGGGATCAGGTGGTTCCAATGCTCTATGGTCGTCAAGAAATTCTGTTGCCAGAAT > SRR10918230.3287552/1‑151 (MQ=0)
GTTTTGCGAAATGAATCTTGACGATGACCTACTCTCACATGGGGAAACCCCACACTACCATCGGCGATGCATCGTTTCACTACTGAGTTCGGGATGGGATCAGGTGGTTCCAATGCTCTATGGTCGTCAAGAAATTCTGTTGCCAGAATGT < SRR10918230.2842275/151‑1 (MQ=0)
TTTTGCGAAATGAATCTTGACGATGACCTACTCTCACATGGGGAAACCCCACACTACCATCGGCGATGCATCGTTTCACTACTGAGTTCGGGATGGGATCAGGTGGTTCCAATGCTCTATGGTCGTCAAGAAATTCTGTTGCCAGAATGTC < SRR10918230.5080302/151‑1 (MQ=0)
TTTTGCGAAATGAATCTTGACGATGACCTACTCTCACATGGGGAAACCCCACACTACCATCGGCGATGCATCGTTTCACTACTGAGTTCGGGATGGGATCAGGTGGTTCCAATGCTCTATGGTCGTCAAGAAATTCTGTTGCCAGAATGTC < SRR10918230.4362808/151‑1 (MQ=0)
TTTGCGAAATGAATCTTGACGATGACCTACTCTCACATGGGGAAACCCCACACTACCATCGGCGATGCATCGTTTCACTACTGAGTTCGGGATGGGATCAGGTGGTTCCAATGCTCTATGGTCGTCAAGAAATTCTGTTGCCAGAATGTCC < SRR10918230.4678580/151‑1 (MQ=0)
CGAAATGAATCTTGACGATGACCTACTCTCACATGGGGAAACCCCACACTACCATCGGCGATGCATCGTTTCACTACTGAGTTCGGGATGGGATCAGGTGGTTCCAATGCTCTATGGTCGTCAAGAAATTCTGTTGCCAGAATGTCCAGAT < SRR10918230.4191031/151‑1 (MQ=0)
GAAATGAATCTTGACGATGACCTACTCTCACATGGGGAAACCCCACACTACCATCGGCGATGCATCGTTTCACTACTGAGTTCGGGATGGGATCAGGTGGTTCCAATGCTCTATGGTCGTCAAGAAATTCTGTTGCCAGAATGTCCAGATG < SRR10918230.69683/151‑1 (MQ=0)
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TCATGTGCCAGCCTGAACTACTGCTACATGGGTGAAGAGCGCAATGTAAGCGCTACGGTCAGCTATCAGTTCTAACCGATATTGAAACCCGTGAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGTTTTGCGAAATGAATCTTGACGATGACCTACTCTCACATGGGGAAACCCCACACTACCATCGGCGATGCATCGTTTCACTACTGAGTTCGGGATGGGATCAGGTGGTTCCAATGCTCTATGGTCGTCAAGAAATTCTGTTGCCAGAATGTCCAGATG > CP009974/1915037‑1915321
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
