Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F434 I0 R1 1130 215.9 7031662 97.1% 6827743 147.9

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation freq annotation gene description
RA CP009273 274,735 A→T 100% pseudogene (138/348 nt) afuB ← pseudogene, CP4‑6 prophage; ABC transporter permease family;Phage or Prophage Related

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP009273274,7350AT100.0% 584.1 / NA 178pseudogene (138/348 nt)afuBpseudogene, CP4‑6 prophage; ABC transporter permease family;Phage or Prophage Related
Reads supporting (aligned to +/- strand):  ref base A (0/0);  new base T (105/73);  total (105/73)
Rejected as polymorphism: Frequency below/above cutoff threshold.
Rejected as polymorphism: Variant not supported by required number of reads on each strand.

Only 100 of 178 total aligned reads displayed.

AAATAATCGCCAGCATCACCACGATCAGAATGGAACCGTAGGCAATCGCTACACCGTATTCGCCATCTTCCACGCGGTTGAGGATGTAAGCCGTCGCTACGCGGGTATCCGGCGTGACGAGGAACACAATGGCGCTGACGGTGGTAATGGCGCGCACAAAGCTGTAAATCAGCGCCGAGAGGATCGCCGGGCGCAGCAGCGGCAGCAGGATGTGCGTAATGGTACGCAGGGAACCGGCGCGCAGGCTGAGTGAGGCTTCATCGAGCGATTTATCGATTTGGCCCGGTAAT  >  CP009273/274590‑274879
                                                                                                                                                 |                                                                                                                                                
aaaTAATCGCCAGCATCACCACGATCAGAATGGAACCGTAGGCAATCGCTACACCGTATTCGCCATCTTCCACGCGGTTGAGGATGTAAGCCGTCGCTACGCGGGTATCCGGCGTGACGAGGAACACAATGGCGCTGACGGTGGTTAt                                                                                                                                                >  2:1501219/1‑148 (MQ=255)
  ataatCGCCAGCATCACCACGATCAGAATGGAACCGTAGGCAATCGCTACACCGTATTCGCCATCTTCCACGCGGTTGAGGATGTAAGCCGTCGCTACGCGGGTATCCGGCGTGACGAGGAACACAATGGCGCTGACGGTGGTTATgg                                                                                                                                              >  2:1053674/1‑148 (MQ=255)
   taatCGCCAGCATCACCACGATCAGAATGGAACCGTAGGCAATCGCTACACCGTATTCGCCATCTTCCACGCGGTTGAGGATGTAAGCCGTCGCTACGCGGGTATCCGGCGTGACGAGGAACACAATGGCGCTGACGGTGGTTATGgc                                                                                                                                             >  1:2361915/1‑148 (MQ=255)
   taatCGCCAGCATCACCACGATCAGAATGGAACCGTAGGCAATCGCTACACCGTATTCGCCATCTTCCACGCGGTTGAGGATGTAAGCCGTCGCTACGCGGGTATCCGGCGTGACGAGGAACACAATGGCGCTGACGGTGGTTATGgc                                                                                                                                             >  2:1592677/1‑148 (MQ=255)
    aatCGCCAGCATCACCACGATCAGAATGGAACCGTAGGCAATCGCTACACCGTATTCGCCATCTTCCACGCGGTTGAGGATGTAAGCCGTCGCTACGCGGGTATCCGGCGTGACGAGGAACACAATGGCGCTGACGGTGGTTATGgcg                                                                                                                                            >  1:3469143/1‑148 (MQ=255)
    aatCGCCAGCATCACCACGATCAGAATGGAACCGTAGGCAATCGCTACACCGTATTCGCCATCTTCCACGCGGTTGAGGATGTAAGCCGTCGCTACGCGGGTATCCGGCGTGACGAGGAACACAATGGCGCTGACGGTGGTTATGgcg                                                                                                                                            >  1:575778/1‑148 (MQ=255)
    aatCGCCAGCATCACCACGATCAGAATGGAACCGTAGGCAATCGCTACACCGTATTCGCCATCTTCCACGCGGTTGAGGATGTAAGCCGTCGCTACGCGGGTATCCGGCGTGACGAGGAACACAATGGCGCTGACGGTGGTTATGgcg                                                                                                                                            >  2:1195563/1‑148 (MQ=255)
      tCGCCAGCATCACCACGATCAGAATGGAACCGTAGGCAATCGCTACACCGTATTCGCCATCTTCCACGCGGTTGAGGATGTAAGCCGTCGCTACGCGGGTATCCGGCGTGACGAGGAACACAATGGCGCTGACGGTGGTTATGgcgcg                                                                                                                                          >  1:1553646/1‑148 (MQ=255)
      tCGCCAGCATCACCACGATCAGAATGGAACCGTAGGCAATCGCTACACCGTATTCGCCATCTTCCACGCGGTTGAGGATGTAAGCCGTCGCTACGCGGGTATCCGGCGTGACGAGGAACACAATGGCGCTGACGGTGGTTATGgcgcg                                                                                                                                          >  1:2285199/1‑148 (MQ=255)
      tCGCCAGCATCACCACGATCAGAATGGAACCGTAGGCAATCGCTACACCGTATTCGCCATCTTCCACGCGGTTGAGGATGTAAGCCGTCGCTACGCGGGTATCCGGCGTGACGAGGAACACAATGGCGCTGACGGTGGTTATGgcgcg                                                                                                                                          >  1:3285234/1‑148 (MQ=255)
             cATCACCACGATCAGAATGGAACCGTAGGCAATCGCTACACCGTATTCGCCATCTTCCACGCGGTTGAGGATGTAAGCCGTCGCTACGCGGGTATCCGGCGTGACGAGGAACACAATGGCGCTGACGGTGGTTATGGCGCGCACAAAg                                                                                                                                   >  1:807454/1‑148 (MQ=255)
                caccacGATCAGAATGGAACCGTAGGCAATCGCTACACCGTATTCGCCATCTTCCACGCGGTTGAGGATGTAAGCCGTCGCTACGCGGGTATCCGGCGTGACGAGGAACACAATGGCGCTGACGGTGGTTATGGCGCGCACAAAGCTg                                                                                                                                >  1:1263602/1‑148 (MQ=255)
                caccacGATCAGAATGGAACCGTAGGCAATCGCTACACCGTATTCGCCATCTTCCACGCGGTTGAGGATGTAAGCCGTCGCTACGCGGGTATCCGGCGTGACGAGGAACACAATGGCGCTGACGGTGGTTATGGCGCGCACAAAGCTg                                                                                                                                >  1:687194/1‑148 (MQ=255)
                caccacGATCAGAATGGAACCGTAGGCAATCGCTACACCGTATTCGCCATCTTCCACGCGGTTGAGGATGTAAGCCGTCGCTACGCGGGTATCCGGCGTGACGAGGAACACAATGGCGCTGACGGTGGTTATGGCGCGCACAAAGCTg                                                                                                                                >  1:2492579/1‑148 (MQ=255)
                 accacGATCAGAATGGAACCGTAGGCAATCGCTACACCGTATTCGCCATCTTCCACGCGGTTGAGGATGTAAGCCGTCGCTACGCGGGTATCCGGCGTGACGAGGAACACAATGGCGCTGACGGTGGTTATGGCGCGCACAAAGCTGt                                                                                                                               <  1:3077890/148‑1 (MQ=255)
                 accacGATCAGAATGGAACCGTAGGCAATCGCTACACCGTATTCGCCATCTTCCACGCGGTTGAGGATGTAAGCCGTCGCTACGCGGGTATCCGGCGTGACGAGGAACACAATGGCGCTGACGGTGGTTATGGCGCGCACAAAGCTGt                                                                                                                               >  2:436994/1‑148 (MQ=255)
                  ccacGATCAGAATGGAACCGTAGGCAATCGCTACACCGTATTCGCCATCTTCCACGCGGTTGAGGATGTAAGCCGTCGCTACGCGGGTATCCGGCGTGACGAGGAACACAATGGCGCTGACGGTGGTTATGGCGCGCACAAAGCTGTa                                                                                                                              >  2:3237482/1‑148 (MQ=255)
                  ccacGATCAGAATGGAACCGTAGGCAATCGCTACACCGTATTCGCCATCTTCCACGCGGTTGAGGATGTAAGCCGTCGCTACGCGGGTATCCGGCGTGACGAGGAACACAATGGCGCTGACGGTGGTTATGGCGCGCACAAAGCTGTa                                                                                                                              >  2:356931/1‑148 (MQ=255)
                   cacGATCAGAATGGAACCGTAGGCAATCGCTACACCGTATTCGCCATCTTCCACGCGGTTGAGGATGTAAGCCGTCGCTACGCGGGTATCCGGCGTGACGAGGAACACAATGGCGCTGACGGTGGTTATGGCGCGCACACAGCTGTaa                                                                                                                             >  2:2554732/1‑148 (MQ=255)
                   cacGATCAGAATGGAACCGTAGGCAATCGCTACACCGTATTCGCCATCTTCCACGCGGTTGAGGATGTAAGCCGTCGCTACGCGGGTATCCGGCGTGACGAGGAACACAATGGCGCTGACGGTGGTTATGGCGCGCACAAAGCTGTaa                                                                                                                             >  1:3339132/1‑148 (MQ=255)
                    acGATCAGAATGGAACCGTAGGCAATCGCTACACCGTATTCGCCATCTTCCACGCGGTTGAGGATGTAAGCCGTCGCTACGCGGGTATCCGGCGTGACGAGGAACACAATGGCGCTGACGGTGGTTATGGCGCGCACAAAGCTGTaaa                                                                                                                            >  1:1006034/1‑148 (MQ=255)
                    acGATCAGAATGGAACCGTAGGCAATCGCTACACCGTATTCGCCATCTTCCACGCGGTTGAGGATGTAAGCCGTCGCTACGCGGGTATCCGGCGTGACGAGGAACACAATGGCGCTGACGGTGGTTATGGCGCGCACAAAGCTGTaaa                                                                                                                            >  1:489077/1‑148 (MQ=255)
                    acGATCAGAATGGAACCGTAGGCAATCGCTACACCGTATTCGCCATCTTCCACGCGGTTGAGGATGTAAGCCGTCGCTACGCGGGTATCCGGCGTGACGAGGAACACAATGGCGCTGACGGTGGTTATGGCGCGCACAAAGCTGTaaa                                                                                                                            <  2:890117/148‑1 (MQ=255)
                    acGATCAGAATGGAACCGTAGGCAATCGCTACACCGTATTCGCCATCTTCCACGCGGTTGAGGATGTAAGCCGTCGCTACGCGGGTATCCGGCGTGACGAGGAACACAATGGCGCTGACGGTGGTTATGGCGCGCACAAAGCTGTaaa                                                                                                                            >  1:1005982/1‑148 (MQ=255)
                     cGATCAGAATGGAACCGTAGGCAATCGCTACACCGTATTCGCCATCTTCCACGCGGTTGAGGATGTAAGCCGTCGCTACGCGGGTATCCGGCGTGACGAGGAACACAATGGCGCTGACGGTGGTTATGGCGCGCACAAAGCTGTAAAt                                                                                                                           >  2:1433208/1‑148 (MQ=255)
                     cGATCAGAATGGAACCGTAGGCAATCGCTACACCGTATTCGCCATCTTCCACGCGGTTGAGGATGTAAGCCGTCGCTACGCGGGTATCCGGCGTGACGAGGAACACAATGGCGCTGACGGTGGTTATGGCGCGCACAAAGCTGTAAAt                                                                                                                           <  2:2912464/148‑1 (MQ=255)
                     cGATCAGAATGGAACCGTAGGCAATCGCTACACCGTATTCGCCATCTTCCACGCGGTTGAGGATGTAAGCCGTCGCTACGCGGGTATCCGGCGTGACGAGGAACACAATGGCGCTGACGGTGGTTATGGCGCGCACAAAGCTGTAAAt                                                                                                                           <  2:228928/148‑1 (MQ=255)
                     cGATCAGAATGGAACCGTAGGCAATCGCTACACCGTATTCGCCATCTTCCACGCGGTTGAGGATGTAAGCCGTCGCTACGCGGGTATCCGGCGTGACGAGGAACACAATGGCGCTGACGGTGGTTATGGCGCGCACAAAGCTGTAAAt                                                                                                                           >  2:454298/1‑148 (MQ=255)
                      gATCAGAATGGAACCGTAGGCAATCGCTACACCGTATTCGCCATCTTCCACGCGGTTGAGGATGTAAGCCGTCGCTACGCGGGTATCCGGCGTGACGAGGAACACAATGGCGCTGACGGTGGTTATGGCGCGCACAAAGCTGTAAATc                                                                                                                          <  2:1111384/148‑1 (MQ=255)
                      gATCAGAATGGAACCGTAGGCAATCGCTACACCGTATTCGCCATCTTCCACGCGGTTGAGGATGTAAGCCGTCGCTACGCGGGTATCCGGCGTGACGAGGAACACAATGGCGCTGACGGTGGTTATGGCGCGCACAAAGCTGTAAATc                                                                                                                          <  2:2044828/148‑1 (MQ=255)
                        tCAGAATGGAACCGTAGGCAATCGCTACACCGTATTCGCCATCTTCCACGCGGTTGAGGATGTAAGCCGTCGCTACGCGGGTATCCGGCGTGACGAGGAACACAATGGCGCTGACGGTGGTTATGGCGCGCACAAAGCTg                                                                                                                                >  2:1131532/1‑140 (MQ=255)
                        tCAGAATGGAACCGTAGGCAATCGCTACACCGTATTCGCCATCTTCCACGCGGTTGAGGATGTAAGCCGTCGCTACGCGGGTATCCGGCGTGACGAGGAACACAATGGCGCTGACGGTGGTTATGGCGCGCACAAAGCTGTAAATCAg                                                                                                                        >  1:2241055/1‑148 (MQ=255)
                        tCAGAATGGAACCGTAGGCAATCGCTACACCGTATTCGCCATCGTCCACGCGGTTGAGGATGTAAGCCGTCGCTACGCGGGTATCCGGCGTGACGAGGAACACAATGGCGCTGACGGTGGTTATGGCGCGCACAAAGCTGTAAATCAg                                                                                                                        <  2:2391253/148‑1 (MQ=255)
                          aGAATGGAACCGTAGGCAATCGCTACACCGTATTCGCCATCTTCCACGCGGTTGAGGATGTAAGCCGTCGCTACGCGGGTATCCGGCGTGACGAGGAACACAATGGCGCTGACGGTGGTTATGGCGCGCACAAAGCTGTAAATCAgcg                                                                                                                      >  1:3130386/1‑148 (MQ=255)
                          aGAATGGAACCGTAGGCAATCGCTACACCGTATTCGCCATCTTCCACGCGGTTGAGGATGTAAGCCGTCGCTACGCGGGTATCCGGCGTGACGAGGAACACAATGGCGCTGACGGTGGTTATGGCGCGCACAAAGCTGTAAATCAgcg                                                                                                                      <  1:1151530/148‑1 (MQ=255)
                           gAATGGAACCGTAGGCAATCGCTACACCGTATTCGCCATCTTCCACGCGGTTGAGGATGTAAGCCGTCGCTACGCGGGTATCCGGCGTGACGAGGAACACAATGGCGCTGACGGTGGTTATGGCGCGCACAAAGCTGTAAATCAgcgc                                                                                                                     <  1:1063754/148‑1 (MQ=255)
                            aaTGGAACCGTAGGCAATCGCTACACCGTATTCGCCATCTTCCACGCGGTTGAGGATGTAAGCCGTCGCTACGCGGGTATCCGGCGTGACGAGGAACACAATGGCGCTGACGGTGGTTATGGCGCACACAAAGCTGTAAATCAGCGcc                                                                                                                    >  2:525579/1‑148 (MQ=255)
                             aTGGAACCGTAGGCAATCGCTACACCGTATTCGCCATCTTCCACGCGGTTGAGGATGTAAGCCGTCGCTACGCGGGTATCCGGCGTGACGAGGAACACAATGGCGCTGACGGTGGTTATGGCGCGCACAAAGCTGTAAATCAGCGCCg                                                                                                                   <  2:1917210/148‑1 (MQ=255)
                                   ccGTAGGCAATCGCTACACCGTATTCGCCATCTTCCACGCGGTTGAGGATGTAAGCCGTCGCTACGCGGGTATCCGGCGTGACGAGGAACACAATGGCGCTGACGGTGGTTATGGCGCGCACAAAGCTGTAAATCAGCGCCGAGAGGa                                                                                                             <  2:2120158/148‑1 (MQ=255)
                                   ccGTAGGCAATCGCTACACCGTATTCGCCATCTTCCACGCGGTTGAGGATGTAAGCCGTCGCTACGCGGGTATCCGGCGTGACGAGGAACACAATGGCGCTGACGGTGGTTATGGCGCGCACAAAGCTGTAAATCAGCGCCGAGAGGa                                                                                                             >  2:134016/1‑148 (MQ=255)
                                    cGTAGGCAATCGCTACACCGTATTCGCCATCTTCCACGCGGTTGAGGATGTAAGCCGTCGCTACGCGGGTATCCGGCGTGCCGAGGAACACAATGGCGCTGACGGTGGTTATGGCGCGCACAAAGCTGTAAATCAGCGCCGAGAGGAt                                                                                                            >  1:193413/1‑148 (MQ=255)
                                    cGTAGGCAATCGCTACACCGTATTCGCCATCTTCCACGCGGTTGAGGATGTAAGCCGTCGCTACGCGGGTATCCGGCGTGACGAGGAACACAATGGCGCTGACGGTGGTTATGGCGCGCACAAAGCTGTAAATCAGCGCCGAGAGGAt                                                                                                            >  1:193533/1‑148 (MQ=255)
                                    cGTAGGCAATCGCTACACCGTATTCGCCATCTTCCACGCGGTTGAGGATGTAAGCCGTCGCTACGCGGGTATCCGGCGTGACGAGGAACACAATGGCGCTGACGGTGGTTATGGCGCGCACAAAGCTGTAAATCAGCGCCGAGAGGAt                                                                                                            >  1:193477/1‑148 (MQ=255)
                                      tAGGCAATCGCTACACCGTATTCGCCATCTTCCACGCGGTTGAGGATGTAAGCCGTCGCTACGCGGGTATCCGGCGTGACGAGGAACACAATGGCGCTGACGGTGGTTATGGCGCGCACAAAGCTGTAAATCAGCGCCGAGAGGATCg                                                                                                          <  2:248746/148‑1 (MQ=255)
                                         gCAATCGCTACACCGTATTCGCCATCTTCCACGCGGTTGAGGATGTAAGCCGTCGCTACGCGGGTATCCGGCGTGACGAGGAACACAATGGCGCTGACGGTGGTTATGGCGCGCACAAAGCTGTAAATCAGCGCCGAGAGGATCGCCg                                                                                                       >  2:446524/1‑148 (MQ=255)
                                                     ccGTATTCGCCATCTTCCACGCGGTTGAGGATGTAAGCCGTCGCTACGCGGGTATCCGGCGTGACGAGGAACACAATGGCGCTGACGGTGGTTATGGCGCGCACAAAGCTGTAAATCAGCGCCGAGAGGATCGCCGGGCGCAGCAGCg                                                                                           >  1:1717964/1‑148 (MQ=255)
                                                      cGTATTCGCCATCTTCCACGCGGTTGAGGATGTAAGCCGTCGCTACGCGGGTATCCGGCGTGACGAGGAACACAATGGCGCTGACGGTGGTTATGGCGCGCACAAAGCTGTAAATCAGCGCCGAGAGGATCGCCGGGCGCAGCAGCgg                                                                                          >  2:151766/1‑148 (MQ=255)
                                                      cGTATTCGCCATCTTCCACGCGGTTGAGGATGTAAGCCGTCGCTACGCGGGTATCCGGCGTGACGAGGAACACAATGGCGCTGACGGTGGTTATGGCGCGCACAAAGCTGTAAATCAGCGCCGAGAGGATCGCCGGGCGCAGCAGCgg                                                                                          >  2:151639/1‑148 (MQ=255)
                                                          ttCGCCATCTTCCACGCGGTTGAGGATGTAAGCCGTCGCTACGCGGGTATCCGGCGTGACGAGGAACACAATGGCGCTGACGGTGGTTATGGCGCGCACAAAGCTGTAAATCAGCGCCGAGAGGATCGCCGGGCGCAGCAGCGgcagc                                                                                      >  2:2175571/1‑148 (MQ=255)
                                                             gCCATCTTCCACGCGGTTGAGGATGTAAGCCGTCGCTACGCGGGTATCCGGCGTGACGAGGAACACAATGGCGCTGACGGTGGTTATGGCGCGCACAAAGCTGTAAATCAGCGCCGAGAGGATCGCCGGGCGCAGCAGCGGCAGCAgg                                                                                   <  2:946124/148‑1 (MQ=255)
                                                              ccATCTTCCACGCGGTTGAGGATGTAAGCCGTCGCTACGCGGGTATCCGGCGTGACGAGGAACACAATGGCGCTGACGGTGGTTATGGCGCGCACAAAGCTGTAAATCAGCGCCGAGAGGATCGCCGGGCGCAGCAGCGGCAGCAGGa                                                                                  <  1:454298/148‑1 (MQ=255)
                                                              ccATCTTCCACGCGGTTGAGGATGTAAGCCGTCGCTACGCGGGTATCCGGCGTGACGAGGAACACAATGGCGCTGACGGTGGTTATGGCGCGCACAAAGCTGTAAATCAGCGCCGAGAGGATCGCCGGGCGCAGCAGCGGCAGCAGGa                                                                                  <  2:2634123/148‑1 (MQ=255)
                                                                  cTTCCACGCGGTTGAGGATGTAAGCCGTCGCTACGCGGGTATCCGGCGTGACGAGGAACACAATGGCGCTGACGGTGGTTATGGTGCGCACAAAGCTGTAAATCAGCGCCGAGAGGATCGCCGGGCGCAGCAGCGGCAGCAGGAtgtg                                                                              >  1:952916/1‑148 (MQ=255)
                                                                  cTTCCACGCGGTTGAGGATGTAAGCCGTCGCTACGCGGGTATCCGGCGTGACGAGGAACACAATGGCGCTGACGGTGGTTATGGTGCGCACAAAGCTGTAAATCAGCGCCGAGAGGATCGCCGGGCGCAGCAGCGGCAGCAGGAtgtg                                                                              >  1:952289/1‑148 (MQ=255)
                                                                  cTTCCACGCGGTTGAGGATGTAAGCCGTCGCTACGCGGGTATCCGGCGTGACGAGGAACACAATGGCGCTGACGGTGGTTATGGCGCGCACAAAGCTGTAAATCAGCGCCGAGAGGATCGCCGGGCGCAGCAGCGGCAGCAGGAtgtg                                                                              >  2:2060515/1‑148 (MQ=255)
                                                                  cTTCCACGCGGTTGAGGATGTAAGCCGTCGCTACGCGGGTATCCGGCGTGACGAGGAACACAATGGCGCTGACGGTGGTTATGGCGCGCACAAAGCTGTAAATCAGCGCCGAGAGGATCGCCGGGCGCAGCAGCGGCAGCAGGAtgtg                                                                              >  2:3427795/1‑148 (MQ=255)
                                                                         gcgGTTGAGGATGTAAGCCGTCGCTACGCGGGTATCCGGCGTGACGAGGAACACAATGGCGCTGACGGTGGTTATGGCGCGCACAAAGCTGTAAATCAGCGCCGAGAGGATCGCCGGGCGCAGCAGCGGCAGCAGGATGTGCGTAATg                                                                       <  2:2285199/148‑1 (MQ=255)
                                                                           ggTTGAGGATGTAAGCCGTCGCTACGCGGGTATCCGGCGTGACGAGGAACACAATGGCGCTGACGGTGGTTATGGCGCGCACAAAGCTGTAAATCAGCGCCGAGAGGATCGCCGGGCGCAGCAGCGGCAGCAGGATGTGCGTAATGGt                                                                     <  1:455976/148‑1 (MQ=255)
                                                                            gTTGAGGATGTAAGCCGTCGCTACGCGGGTATCCGGCGTGACGAGGAACACAATGGCGCTGACGGTGGTTATGGCGCGCACAAAGCTGTAAATCAGCGCCGAGAGGATCGCCGGGCGCAGCAGCGGCAGCAGGATGTGCGTAATGGTa                                                                    >  2:1738612/1‑148 (MQ=255)
                                                                            gTTGAGGATGTAAGCCGTCGCTACGCGGGTATCCGGCGTGACGAGGAACACAATGGCGCTGACGGTGGTTATGGCGCGCACAAAGCTGTAAATCAGCGCCGAGAGGATCGCCGGGCGCAGCAGCGGCAGCAGGATGTGCGTAATGGTa                                                                    >  2:1738894/1‑148 (MQ=255)
                                                                             ttGAGGATGTAAGCCGTCGCTACGCGGGTATCCGGCGTGACGAGGAACACAATGGCGCTGACGGTGGTTATGGCGCGCACAAAGCTGTAAATCAGCGCCGAGAGGATCGCCGGGCGCAGCAGCGGCAGCAGGATGTGCGTAATGGTAc                                                                   >  1:2017348/1‑148 (MQ=255)
                                                                             ttGAGGATGTAAGCCGTCGCTACGCGGGTATCCGGCGTGACGAGGAACACAATGGCGCTGACGGTGGTTATGGCGCGCACAAAGCTGTAAATCAGCGCCGAGAGGATCGCCGGGCGCAGCAGCGGCAGCAGGATGTGCGTAATGGTAc                                                                   >  1:1245223/1‑148 (MQ=255)
                                                                                    tGTAAGCCGTCGCTACGCGGGTATCCGGCGTGACGAGGAACACAATGGCGCTGACGGTGGTTATGGCGCGCACAAAGCTGTAAATCAGCGCCGAGAGGATCGCCGGGCGCAGCAGCGGCAGCAGGATGTGCGTAATGGTACGCAGGGa                                                            <  1:2378289/148‑1 (MQ=255)
                                                                                    tGTAAGCCGTCGCTACGCGGGTATCCGGCGTGACGAGGAACACAATGGCGCTGACGGTGGTTATGGCGCGCACAAAGCTGTAAATCAGCGCCGAGAGGATCGCCGGGCGCAGCAGCGGCAGCAGGATGTGCGTAATGGTACGCAGGGa                                                            <  2:3510072/148‑1 (MQ=255)
                                                                                      tAAGCCGTCGCTACGCGGGTATCCGGCGTGACGAGGAACACAATGGCGCTGACGGTGGTTATGGCGCGCACAAAGCTGTAAATCAGCGCCGAGAGGATCGCCGGGCGCAGCAGCGGCAGCAGGATGTGCGTAATGGTACGCAGGGAAc                                                          >  1:2846886/1‑148 (MQ=255)
                                                                                      tAAGCCGTCGCTACGCGGGTATCCGGCGTGACGAGGAACACAATGGCGCTGACGGTGGTTATGGCGCGCACAAAGCTGTAAATCAGCGCCGAGAGGATCGCCGGGCGCAGCAGCGGCAGCAGGATGTGCGTAATGGTACGCAGGGAAc                                                          >  1:1870058/1‑148 (MQ=255)
                                                                                             tCGCTACGCGGGTATCCGGCGTGACGAGGAACACAATGGCGCTGACGGTGGTTATGGCGCGCACAAAGCTGTAAATCAGCGCCGAGAGGATCGCCGGGCGCAGCAGCGGCAGCAGGATGTGCGTAATGGTACGCAGGGAACCGgcgcg                                                   >  2:1984880/1‑148 (MQ=255)
                                                                                               gCTACGCGGGTATCCGGCGTGACGAGGAACACAATGGCGCTGACGGTGGTTATGGCGCGCACAAAGCTGTAAATCAGCGCCGAGAGGATCGCCGGGCGCAGCAGCGGCAGCAGGATGTGCGTAATGGTACGCAGGGAACCGGCGCGCa                                                 <  1:3237482/148‑1 (MQ=255)
                                                                                                 tACGCGGGTATCCGGCGTGACGAGGAACACAATGGCGCTGACGGTGGTTATGGCGCGCACAAAGCTGTAAATCAGCGCCGAGAGGATCGCCGGGCGCAGCAGCGGCAGCAGGATGTGCGTAATGGTACGCAGGGAACCGGCGCGCAgg                                               <  2:3162148/148‑1 (MQ=255)
                                                                                                   cgcgGGTATCCGGCGTGACGAGGAACACAATGGCGCTGACGGTGGTTATGGCGCGCACAAAGCTGTAAATCAGCGCCGAGAGGATCGCCGGGCGCAGCAGCGGCAGCAGGATGTGCGTAATGGTACGCAGGGAACCGGCGCGCAGGCt                                             >  2:1477013/1‑148 (MQ=255)
                                                                                                    gcgGGTATCGGGCGTGACGAGGAACACAATGGCGCTGACGGTGGTTATGGCGCGCACAAAGCTGTAAATCAGCGCCGAGAGGATCGCCGGGCGCAGCAGCGGCAGCAGGATGTGCGTAATGGTACGCAGGGAACCGGCGCGCAGGCtg                                            <  1:1195563/148‑1 (MQ=255)
                                                                                                     cgGGTATCCGGCGTGACGAGGAACACAATGGCGCTGACGGTGGTTATGGCGCGCACAAAGCTGTAAATCAGCGCCGAGAGGATCGCCGGGCGCAGCAGCGGCAGCAGGATGTGCGTAATGGTACGCAGGGAACCGGCGCGCAGGCtga                                           <  2:1544224/148‑1 (MQ=255)
                                                                                                       ggTATCCGGCGTGACGAGGAACACAATGGCGCTGACGGTGGTTATGGCGCGCACAAAGCTGTAAATCAGCGCCGAGAGGATCGCCGGGCGCAGCAGCGGCAGCAGGATGTGCGTAATGGTACGCAGGGAACCGGCGCGCAGGCtgagt                                         >  2:232457/1‑148 (MQ=255)
                                                                                                       ggTATCCGGCGTGACGAGGAACACAATGGCGCTGACGGTGGTTATGGCGCGCACAAAGCTGTAAATCAGCGCCGAGAGGATCGCCGGGCGCAGCAGCGGCAGCAGGATGTGCGTAATGGTACGCAGGGAACCGGCGCGCAGGCtgagt                                         >  2:232509/1‑148 (MQ=255)
                                                                                                       ggTATCCGGCGTGACGAGGAACACAATGGCGCTGACGGTGGTTATGGCGCGCACAAAGCTGTAAATCAGCGCCGAGAGGATCGCCGGGCGCAGCAGCGGCAGCAGGATGTGCGTAATGGTACGCAGGGAACCGGCGCGCAGGCtgagt                                         >  1:1601730/1‑148 (MQ=255)
                                                                                                        gTATCCGGCGTGACGAGGAACACAATGGCGCTGACGGTGGTTATGGCGCGCACAAAGCTGTAAATCAGCGCCGAGAGGATCGCCGGGCGCAGCAGCGGCAGCAGGATGTGCGTAATGGTACGCAGGGAACCGGCGCGCAGGCtgagtg                                        <  2:2081019/148‑1 (MQ=255)
                                                                                                        gTATCCGGCGTGACGAGGAACACAATGGCGCTGACGGTGGTTATGGCGCGCACAAAGCTGTAAATCAGCGCCGAGAGGATCGCCGGGCGCAGCAGCGGCAGCAGGATGTGCGTAATGGTACGCAGGGAACCGGCGCGCAGGCtgagtg                                        <  1:2557610/148‑1 (MQ=255)
                                                                                                           tCCGGCGTGACGAGGAACACAATGGCGCTGACGGTGGTTATGGCGCGCACAAAGCTGTAAATCAGCGCCGAGAGGATCGCCGGGCGCAGCAGCGGCAGCAGGATGTGCGTAATGGTACGCAGGGAACCGGCGCGCAGGCTGAGTGAgg                                     >  1:2975581/1‑148 (MQ=255)
                                                                                                           tCCGGCGTGACGAGGAACACAATGGCGCTGACGGTGGTTATGGCGCGCACAAAGCTGTAAATCAGCGCCGAGAGGATCGCCGGGCGCAGCAGCGGCAGCAGGATGTGCGTAATGGTACGCAGGGAACCGGCGCGCAGGCTGAGTGAgg                                     >  1:1223751/1‑148 (MQ=255)
                                                                                                            ccGGCGTGACGAGGAACACAATGGCGCTGACGGTGGTTATGGCGCGCACAAAGCTGTAAATCAGCGCCGAGAGGATCGCCGGGCGCAGCAGCGGCAGCAGGATGTGCGTAATGGTACGCAGGGAACCGGCGCGCAGGCTGAGTGAGGc                                    >  1:822809/1‑148 (MQ=255)
                                                                                                               gCGTGACGAGGAACACAATGGCGCTGACGGTGGTTATGGCGCGCACAAAGCTGTAAATCAGCGCCGAGAGGATCGCCGGGCGCAGCAGCGGCAGCAGGATGTGCGTAATGGTACGCAGGGAACCGGCGCGCAGGCTGAGTGAGGCTTc                                 >  1:2648784/1‑148 (MQ=255)
                                                                                                                cGTGACGAGGAACACAATGGCGCTGACGGTGGTTATGGCGCGCACAAAGCTGTAAATCAGCGCCGAGAGGATCGCCGGGCGCAGCAGCGGCAGCAGGATGTGCGTAATGGTACGCAGGGAACCGGCGCGCAGGCTGAGTGAGGCTTCa                                <  1:151639/148‑1 (MQ=255)
                                                                                                                 gTGACGAGGAACACAATGGCGCTGACGGTGGTTATGGCGCGCACAAAGCTGTAAATCAGCGCCGAGAGGATCGCCGGGCGCAGCAGCGGCAGCAGGATGTGCGTAATGGTACGCAGGGAACCGGCGCGCAGGCTGAGTGAGGCTTCAt                               <  2:1247526/148‑1 (MQ=255)
                                                                                                                  tGACGAGGAACACAATGGCGCTGACGGTGGTTATGGCGCGCACAAAGCTGTAAATCAGCGCCGAGAGGATCGCCGGGCGCAGCAGCGGCAGCAGGATGTGCGTAATGGTACGCAGGGAACCGGCGCGCAGGCTGAGTGAGGCTTCATc                              >  1:1838509/1‑148 (MQ=255)
                                                                                                                         gAACACAATGGCGCTGACGGTGGTTATGGCGCGCACAAAGCTGTAAATCAGCGCCGAGAGGATCGCCGGGCGCAGCAGCGGCAGCAGGATGTGCGTAATGGTACGCAGGGAACCGGCGCGCAGGCTGAGTGAGGCTTCATCGAGCGAt                       <  1:2163644/148‑1 (MQ=255)
                                                                                                                         gAACACAATGGCGCTGACGGTGGTTATGGCGCGCACAAAGCTGTAAATCAGCGCCGAGAGGATCGCCGGGCGCAGCAGCGGCAGCAGGATGTGCGTAATGGTACGCAGGGAACCGGCGCGCAGGCTGAGTGAGGCTTCATCGAGCGAt                       <  1:884237/148‑1 (MQ=255)
                                                                                                                           acacAATGGCGCTGACGGTGGTTTTGGCGCGCACAAAGCTTTAAATCAGCGCCGAGAGGATCGCCGGGCGCAGCAGCGGCAGCAGGATGTGCGTAATGGTACGCAGGGAACCGGCGCGCAGGCTGAGTGAGGCTTCATCGAGCGAttt                     <  1:1501219/148‑1 (MQ=255)
                                                                                                                           acacAATGGCGCTGACGGTGGTTATGGCGCGCACAAAGCTGTAAATCAGCGCCGAGAGGATCGCCGGGCGCAGCAGCGGCAGCAGGATGTGCGTAATGGTACGCAGGGAACCGGCGCGCAGGCTGAGTGAGGCTTCATCGAGCGAttt                     <  1:2060515/148‑1 (MQ=255)
                                                                                                                            cacaATGGCGCTGACGGTGGTTATGGCGCGCACAAAGCTGTAAATCAGCGCCGAGAGGATCGCCGGGCGCAGCAGCGGCAGCAGGATGTGCGTAATGGTACGCAGGGAACCGGCGCGCAGGCTGAGTGAGGCTTCATCGAGCGATTTa                    >  2:2203601/1‑148 (MQ=255)
                                                                                                                            cacaATGGCGCTGACGGTGGTTATGGCGCGCACAAAGCTGTAAATCAGCGCCGAGAGGATCGCCGGGCGCAGCAGCGGCAGCAGGATGTGCGTAATGGTACGCAGGGAACCGGCGCGCAGGCTGAGTGAGGCTTCATCGAGCGATTTa                    >  1:3162376/1‑148 (MQ=255)
                                                                                                                              caATGGCGCTGACGGTGGTTATGGCGCGCACAAAGCTGTAAATCAGCGCCGAGAGGATCGCCGGGCGCAGCAGCGGCAGCAGGATGTGCGTAATGGTACGCAGGGAACCGGCGCGCAGGCTGAGTGAGGCTTCATCGAGCGATTTATc                  >  2:2998831/1‑148 (MQ=255)
                                                                                                                                aTGGCGCTGACGGTGGTTATGGCGCGCACAAAGCTGTAAATCAGCGCCGAGAGGATCGCCGGGCGCAGCAGCGGCAGCAGGATGTGCGTAATGGTACGCAGGGAACCGGCGCGCAGGCTGAGTGAGGCTTCATCGAGCGATTTCTCGa                >  2:426321/1‑148 (MQ=255)
                                                                                                                                aTGGCGCTGACGGTGGTTATGGCGCGCACAAAGCTGTAAATCAGCGCCGAGAGGATCGCCGGGCGCAGCAGCGGCAGCAGGATGTGCGTAATGGTACGCAGGGAACCGGCGCGCAGGCTGAGTGAGGCTTCATCGAGCGATTTATCGa                >  2:2192162/1‑148 (MQ=255)
                                                                                                                                aTGGCGCTGACGGTGGTTATGGCGCGCACAAAGCTGTAAATCAGCGCCGAGAGGATCGCCGGGCGCAGCAGCGGCAGCAGGATGTGCGTAATGGTACGCAGGGAACCGGCGCGCAGGCTGAGTGAGGCTTCATCGAGCGATTTATCGa                <  1:2244116/148‑1 (MQ=255)
                                                                                                                                aTGGCGCTGACGGTGGTTATGGCGCGCACAAAGCTGTAAATCAGCGCCGAGAGGATCGCCGGGCGCAGCAGCGGCAGCAGGATGTGCGTAATGGTACGCAGGGAACCGGCGCGCAGGCTGAGTGAGGCTTCATCGAGCGATTTATCGa                >  2:2765565/1‑148 (MQ=255)
                                                                                                                                 tGGCGCTGACGGTGGTTATGGCGCGCACAAAGCTGTAAATCAGCGCCGAGAGGATCGCCGGGCGCAGCAGCGGCAGCAGGATGTGCGTAATGGTACGCAGGGAACCGGCGCGCAGGCTGAGTGAGGCTTCATCGAGCGATTTATCGAt               <  1:1738612/148‑1 (MQ=255)
                                                                                                                                 tGGCGCTGACGGTGGTTATGGCGCGCACAAAGCTGTAAATCAGCGCCGAGAGGATCGCCGGGCGCAGCAGCGGCAGCAGGATGTGCGTAATGGTACGCAGGGAACCGGCGCGCAGGCTGAGTGAGGCTTCATCGAGCGATTTATCGAt               <  2:3132888/148‑1 (MQ=255)
                                                                                                                                  ggCGCTGACGGTGGTTATGGCGCGCACAAAGCTGTAAATCAGCGCCGAGAGGATCGCCGGGCGCAGCAGCGGCAGCAGGATGTGCGTAATGGTACGCAGGGAACCGGCGCGCAGGCTGAGTGAGGCTTCATCGAGCGATTTATCGAtt              <  2:3469143/148‑1 (MQ=255)
                                                                                                                                       tGACGGTGGTTATGGCGCGCACAAAGCTGTAAATCAGCGCCGAGAGGATCGCCGGGCGCAGCAGCGGCAGCAGGATGTGCGTAATGGTACGCAGGGAACCGGCGCGCAGGCTGAGTGAGGCTTCATCGAGCGATTTATCGATTTGGcc         <  1:1429223/148‑1 (MQ=255)
                                                                                                                                        gACGGTGGTTATGGCGCGCACAAAGCTGTAAATCAGCGCCGAGAGGATCGCCGGGCGCAGCAGCGGCAGCAGGATGTGCGTAATGGTACGCAGGGAACCGGCGCGCAGGCTGAGTGAGGCTTCATCGAGCGAGTTATCGATTTGGccc        >  2:1797552/1‑148 (MQ=255)
                                                                                                                                                 |                                                                                                                                                
AAATAATCGCCAGCATCACCACGATCAGAATGGAACCGTAGGCAATCGCTACACCGTATTCGCCATCTTCCACGCGGTTGAGGATGTAAGCCGTCGCTACGCGGGTATCCGGCGTGACGAGGAACACAATGGCGCTGACGGTGGTAATGGCGCGCACAAAGCTGTAAATCAGCGCCGAGAGGATCGCCGGGCGCAGCAGCGGCAGCAGGATGTGCGTAATGGTACGCAGGGAACCGGCGCGCAGGCTGAGTGAGGCTTCATCGAGCGATTTATCGATTTGGCCCGGTAAT  >  CP009273/274590‑274879

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

BRESEQ :: bam2aln output
GAAAATAATCGCCAGCATCACCACGATCAGAATGGAACCGTAGGCAATCGCTACACCGTATTCGCCATCTTCCACGCGGTTGAGGATGTAAGCCGTCGCTACGCGGGTATCCGGCGTGACGAGGAACACAATGGCGCTGACGGTGGTAATGGCGCGCACAAAGCTGTAAATCAGCGCCGAGAGGATCGCCGGGCGCAGCAGCGGCAGCAGGATGTGCGTAATGGTACGCAGGGAACCGGCGCGCAGGCTGAGTGAGGCTTCATCGAGCGATTTATCGATTTGGCCCGGTAATGA  >  CP009273/274588‑274881
                                                                                                                                                   |                                                                                                                                                  
GAAAATAATCGCCAGCATCACCACGATCAGAATGGAACCGTAGGCAATCGCTACACCGTATTCGCCATCTTCCACGCGGTTGAGGATGTAAGCCGTCGCTACGCGGGTATCCGGCGTGACGAGGAACACAATGGCGCTGACGGTGGTTAT                                                                                                                                                  <  SRR19973065.3070287/150‑1 (MQ=60)
GAAAATAATCGCCAGCATCACCACGATCAGAATGGAACCGTAGGCAATCGCTACACCGTATTCGCCATCTTCCACGCGGTTGAGGATGTAAGCCGTCGCTACGCGGGTATCCGGCGTGACGAGGAACACAATGGCGCTGACGGTGGTTAT                                                                                                                                                  <  SRR19973065.1870684/150‑1 (MQ=60)
GAAAATAATCGCCAGCATCACCACGATCAGAATGGAACCGTAGGCAATCGCTACACCGTATTCGCCATCTTCCACGCGGTTGAGGATGTAAGCCGTCGCTACGCGGGTATCCGGCGTGACGAGGAACACAATGGCGCTGACGGTGGTTAT                                                                                                                                                  <  SRR19973065.1869785/150‑1 (MQ=60)
   AATAATCGCCAGCATCACCACGATCAGAATGGAACCGTAGGCAATCGCTACACCGTATTCGCCATCTTCCACGCGGTTGAGGATGTAAGCCGTCGCTACGCGGGTATCCGGCGTGACGAGGAACACAATGGCGCTGACGGTGGTTATGGC                                                                                                                                               >  SRR19973065.2376610/1‑150 (MQ=60)
   AATAATCGCCAGCATCACCACGATCAGAATGGAACCGTAGGCAATCGCTACACCGTATTCGCCATCTTCCACGCGGTTGAGGATGTAAGCCGTCGCTACGCGGGTATCCGGCGTGACGAGGAACACAATGGCGCTGACGGTGGTTATGGC                                                                                                                                               >  SRR19973065.3098284/1‑150 (MQ=60)
    ATAATCGCCAGCATCACCACGATCAGAATGGAACCGTAGGCAATCGCTACACCGTATTCGCCATCTTCCACGCGGTTGAGGATGTAAGCCGTCGCTACGCGGGTATCCGGCGTGACGAGGAACACAATGGCGCTGACGGTGGTTATGGCG                                                                                                                                              >  SRR19973065.3490264/1‑150 (MQ=60)
    ATAATCGCCAGCATCACCACGATCAGAATGGAACCGTAGGCAATCGCTACACCGTATTCGCCATCTTCCACGCGGTTGAGGATGTAAGCCGTCGCTACGCGGGTATCCGGCGTGACGAGGAACACAATGGCGCTGACGGTGGTTATGGCG                                                                                                                                              >  SRR19973065.579392/1‑150 (MQ=60)
      AATCGCCAGCATCACCACGATCAGAATGGAACCGTAGGCAATCGCTACACCGTATTCGCCATCTTCCACGCGGTTGAGGATGTAAGCCGTCGCTACGCGGGTATCCGGCGTGACGAGGAACACAATGGCGCTGACGGTGGTTATGGCGCG                                                                                                                                            >  SRR19973065.2299606/1‑150 (MQ=60)
      AATCGCCAGCATCACCACGATCAGAATGGAACCGTAGGCAATCGCTACACCGTATTCGCCATCTTCCACGCGGTTGAGGATGTAAGCCGTCGCTACGCGGGTATCCGGCGTGACGAGGAACACAATGGCGCTGACGGTGGTTATGGCGCG                                                                                                                                            >  SRR19973065.3305210/1‑150 (MQ=60)
      AATCGCCAGCATCACCACGATCAGAATGGAACCGTAGGCAATCGCTACACCGTATTCGCCATCTTCCACGCGGTTGAGGATGTAAGCCGTCGCTACGCGGGTATCCGGCGTGACGAGGAACACAATGGCGCTGACGGTGGTTATGGCGCG                                                                                                                                            >  SRR19973065.1563946/1‑150 (MQ=60)
             AGCATCACCACGATCAGAATGGAACCGTAGGCAATCGCTACACCGTATTCGCCATCTTCCACGCGGTTGAGGATGTAAGCCGTCGCTACGCGGGTATCCGGCGTGACGAGGAACACAATGGCGCTGACGGTGGTTATGGCGCGCACAAAG                                                                                                                                     >  SRR19973065.812786/1‑150 (MQ=60)
             AGCATCACCACGATCAGAATGGAACCGTAGGCAATCGCTACACCGTATTCGCCATCTTCCACGCGGTTGAGGATGTAAGCCGTCGCTACGCGGGTATCCGGCGTGACGAGGAACACAATGGCGCTGACGGTGGTTATGGCGCGCACAAAG                                                                                                                                     >  SRR19973065.841689/1‑150 (MQ=60)
                ATCACCACGATCAGAATGGAACCGTAGGCAATCGCTACACCGTATTCGCCATCTTCCACGCGGTTGAGGATGTAAGCCGTCGCTACGCGGGTATCCGGCGTGACGAGGAACACAATGGCGCTGACGGTGGTTATGGCGCGCACAAAGCTG                                                                                                                                  >  SRR19973065.1255741/1‑150 (MQ=60)
                ATCACCACGATCAGAATGGAACCGTAGGCAATCGCTACACCGTATTCGCCATCTTCCACGCGGTTGAGGATGTAAGCCGTCGCTACGCGGGTATCCGGCGTGACGAGGAACACAATGGCGCTGACGGTGGTTATGGCGCGCACAAAGCTG                                                                                                                                  >  SRR19973065.1271929/1‑150 (MQ=60)
                ATCACCACGATCAGAATGGAACCGTAGGCAATCGCTACACCGTATTCGCCATCTTCCACGCGGTTGAGGATGTAAGCCGTCGCTACGCGGGTATCCGGCGTGACGAGGAACACAATGGCGCTGACGGTGGTTATGGCGCGCACAAAGCTG                                                                                                                                  >  SRR19973065.691765/1‑150 (MQ=60)
                ATCACCACGATCAGAATGGAACCGTAGGCAATCGCTACACCGTATTCGCCATCTTCCACGCGGTTGAGGATGTAAGCCGTCGCTACGCGGGTATCCGGCGTGACGAGGAACACAATGGCGCTGACGGTGGTTATGGCGCGCACAAAGCTG                                                                                                                                  >  SRR19973065.2508264/1‑150 (MQ=60)
                  cgatctGATCAGAATGGAACCGTAGGCAATCGCTACACCGTATTCGCCATCTTCCACGCGGTTGAGGATGTAAGCCGTCGCTACGCGGGTATCCGGCGTGACGAGGAACACAATGGCGCTGACGGTGGTTATGGCGCGCACAAAGCTGTA                                                                                                                                <  SRR19973065.1138879/144‑1 (MQ=60)
                   ACCACGATCAGAATGGAACCGTAGGCAATCGCTACACCGTATTCGCCATCTTCCACGCGGTTGAGGATGTAAGCCGTCGCTACGCGGGTATCCGGCGTGACGAGGAACACAATGGCGCTGACGGTGGTTATGGCGCGCACAAAGCTGTAA                                                                                                                               >  SRR19973065.3359526/1‑150 (MQ=60)
                   ACCACGATCAGAATGGAACCGTAGGCAATCGCTACACCGTATTCGCCATCTTCCACGCGGTTGAGGATGTAAGCCGTCGCTACGCGGGTATCCGGCGTGACGAGGAACACAATGGCGCTGACGGTGGTTATGGCGCGCACAAAGCTGTAA                                                                                                                               <  SRR19973065.3096688/150‑1 (MQ=60)
                    CCACGATCAGAATGGAACCGTAGGCAATCGCTACACCGTATTCGCCATCTTCCACGCGGTTGAGGATGTAAGCCGTCGCTACGCGGGTATCCGGCGTGACGAGGAACACAATGGCGCTGACGGTGGTTATGGCGCGCACAAAGCTGTAAA                                                                                                                              >  SRR19973065.1012662/1‑150 (MQ=60)
                    CCACGATCAGAATGGAACCGTAGGCAATCGCTACACCGTATTCGCCATCTTCCACGCGGTTGAGGATGTAAGCCGTCGCTACGCGGGTATCCGGCGTGACGAGGAACACAATGGCGCTGACGGTGGTTATGGCGCGCACAAAGCTGTAAA                                                                                                                              >  SRR19973065.492384/1‑150 (MQ=60)
                    CCACGATCAGAATGGAACCGTAGGCAATCGCTACACCGTATTCGCCATCTTCCACGCGGTTGAGGATGTAAGCCGTCGCTACGCGGGTATCCGGCGTGACGAGGAACACAATGGCGCTGACGGTGGTTATGGCGCGCACAAAGCTGTAAA                                                                                                                              >  SRR19973065.1012715/1‑150 (MQ=60)
                     CACGATCAGAATGGAACCGTAGGCAATCGCTACACCGTATTCGCCATCTTCCACGCGGTTGAGGATGTAAGCCGTCGCTACGCGGGTATCCGGCGTGACGAGGAACACAATGGCGCTGACGGTGGTTATGGCGCGCACAAAGCTGTAAAT                                                                                                                             <  SRR19973065.2599532/150‑1 (MQ=60)
                        GATCAGAATGGAACCGTAGGCAATCGCTACACCGTATTCGCCATCTTCCACGCGGTTGAGGATGTAAGCCGTCGCTACGCGGGTATCCGGCGTGACGAGGAACACAATGGCGCTGACGGTGGTTATGGCGCGCACAAAGCTGTAAATCAG                                                                                                                          >  SRR19973065.2255296/1‑150 (MQ=60)
                        GATCAGAATGGAACCGTAGGCAATCGCTACACCGTATTCGCCATCTTCCACGCGGTTGAGGATGTAAGCCGTCGCTACGCGGGTATCCGGCGTGACGAGGAACACAATGGCGCTGACGGTGGTTATGGCGCGCACAAAGCTGTAAATCAG                                                                                                                          >  SRR19973065.3234633/1‑150 (MQ=60)
                        GATCAGAATGGAACCGTAGGCAATCGCTACACCGTATTCGCCATCTTCCACGCGGTTGAGGATGTAAGCCGTCGCTACGCGGGTATCCGGCGTGACGAGGAACACAATGGCGCTGACGGTGGTTATGGCGCGCACAAAGCTGTAAATCAG                                                                                                                          >  SRR19973065.2256158/1‑150 (MQ=60)
                          TCAGAATGGAACCGTAGGCAATCGCTACACCGTATTCGCCATCTTCCACGCGGTTGAGGATGTAAGCCGTCGCTACGCGGGTATCCGGCGTGACGAGGAACACAATGGCGCTGACGGTGGTTATGGCGCGCACAAAGCTGTAAATCAGCG                                                                                                                        >  SRR19973065.3149435/1‑150 (MQ=60)
                           CAGAATGGAACCGTAGGCAATCGCTACACCGTATTCGCCATCTTCCACGCGGTTGAGGATGTAAGCCGTCGCTACGCGGGTATCCGGCGTGACGAGGAACACAATGGCGCTGACGGTGGTTATGGCGCGCACAAAGCTGTAAATCAGCGC                                                                                                                       >  SRR19973065.3151949/1‑150 (MQ=60)
                            AGAATGGAACCGTAGGCAATCGCTACACCGTATTCGCCATCTTCCACGCGGTTGAGGATGTAAGCCGTCGCTACGCGGGTATCCGGCGTGACGAGGAACACAATGGCGCTGACGGTGGTTATGGCGCGCACAAAGCTGTAAATCAGCGCC                                                                                                                      <  SRR19973065.1158942/150‑1 (MQ=60)
                             GAATGGAACCGTAGGCAATCGCTACACCGTATTCGCCATCTTCCACGCGGTTGAGGATGTAAGCCGTCGCTACGCGGGTATCCGGCGTGACGAGGAACACAATGGCGCTGACGGTGGTTATGGCGCGCACAAAGCTGTAAATCAGCGCCG                                                                                                                     <  SRR19973065.1070476/150‑1 (MQ=60)
                             GAATGGAACCGTAGGCAATCGCTACACCGTATTCGCCATCTTCCACGCGGTTGAGGATGTAAGCCGTCGCTACGCGGGTATCCGGCGTGACGAGGAACACAATGGCGCTGACGGTGGTTATGGCGCGCACAAAGCTGTAAATCAGCGCCG                                                                                                                     <  SRR19973065.1070805/150‑1 (MQ=60)
                              AATGGAACCGTAGGCAATCGCTACACCGTATTCGCCATCTTCCACGCGGTTGAGGATGTAAGCCGTCGCTACGCGGGTATCCGGCGTGACGAGGAACACAATGGCGCTGACGGTGGTTATGGCGCGCACAAAGCTGTAAATCAGCGCCGA                                                                                                                    >  SRR19973065.1508158/1‑150 (MQ=60)
                                    ACCGTAGGCAATCGCTACACCGTATTCGCCATCTTCCACGCGGTTGAGGATGTAAGCCGTCGCTACGCGGGTATCCGGCGTGCCGAGGAACACAATGGCGCTGACGGTGGTTATGGCGCGCACAAAGCTGTAAATCAGCGCCGAGAGGAT                                                                                                              >  SRR19973065.194920/1‑150 (MQ=60)
                                    ACCGTAGGCAATCGCTACACCGTATTCGCCATCTTCCACGCGGTTGAGGATGTAAGCCGTCGCTACGCGGGTATCCGGCGTGACGAGGAACACAATGGCGCTGACGGTGGTTATGGCGCGCACAAAGCTGTAAATCAGCGCCGAGAGGAT                                                                                                              >  SRR19973065.195040/1‑150 (MQ=60)
                                    ACCGTAGGCAATCGCTACACCGTATTCGCCATCTTCCACGCGGTTGAGGATGTAAGCCGTCGCTACGCGGGTATCCGGCGTGACGAGGAACACAATGGCGCTGACGGTGGTTATGGCGCGCACAAAGCTGTAAATCAGCGCCGAGAGGAT                                                                                                              >  SRR19973065.194984/1‑150 (MQ=60)
                                    ACCGTAGGCAATCGCTACACCGTATTCGCCATCTTCCACGCGGTTGAGGATGTAAGCCGTCGCTACGCGGGTATCCGGCGTGACGAGGAACACAATGGCGCTGACGGTGGTTATGGCGCGCACAAAGCTGTAAATCAGCGCCGAGAGGAT                                                                                                              >  SRR19973065.194926/1‑150 (MQ=60)
                                           GCAATCGCTACACCGTATTCGCCATCTTCCACGCGGTTGAGGATGTAAGCCGTCGCTACGCGGGTATCCGGCGTGACGAGGAACACAATGGCGCTGACGGTGGTTATGGCGCGCACAAAGCTGTAAATCAGCGCCGAGAGGATCGCCGGG                                                                                                       <  SRR19973065.2110763/150‑1 (MQ=60)
                                             AATCGCTACACCGTATTCGCCATCTTCCACGCGGTTGAGGATGTAAGCCGTCGCTACGCGGGTATCCGGCGTGACGAGGAACACAATGGCGCTGACGGTGGTTATGGCGCGCACAAAGCTGTAAATCAGCGCCGAGAGGATCGCCGGGCG                                                                                                     <  SRR19973065.92234/150‑1 (MQ=60)
                                                     CACCGTATTCGCCATCTTCCACGCGGTTGAGGATGTAAGCCGTCGCTACGCGGGTATCCGGCGTGACGAGGAACACAATGGCGCTGACGGTGGTTATGGCGCGCACAAAGCTGTAAATCAGCGCCGAGAGGATCGCCGGGCGCAGCAGCG                                                                                             >  SRR19973065.1729089/1‑150 (MQ=60)
                                                     CACCGTATTCGCCATCTTCCACGCGGTTGAGGATGTAAGCCGTCGCTACGCGGGTATCCGGCGTGACGAGGAACACAATGGCGCTGACGGTGGTTATGGCGCGCACAAAGCTGTAAATCAGCGCCGAGAGGATCGCCGGGCGCAGCAGCG                                                                                             >  SRR19973065.1729382/1‑150 (MQ=60)
                                                     CACCGTATTCGCCATCTTCCACGCGGTTGAGGATGTAAGCCGTCGCTACGCGGGTATCCGGCGTGACGAGGAACACAATGGCGCTGACGGTGGTTATGGCGCGCACAAAGATGTAAATCAGCGCCGAGAGGATCGCCGGGCGCAGCAGCG                                                                                             >  SRR19973065.2383616/1‑150 (MQ=60)
                                                        CGTATTCGCCATCTTCCACGCGGTTGAGGATGTAAGCCGTCGCTACGCGGGTATCCGGCGTGACGAGGAACACAATGGCGCTGACGGTGGTTATGGCGCGCACAAAGCTGTAAATCAGCGCCGAGAGGATCGCCGGGCGCAGCAGCGGCA                                                                                          <  SRR19973065.2349853/150‑1 (MQ=60)
                                                              CGCCATCTTCCACGCGGTTGAGGATGTAAGCCGTCGCTACGCGGGTATCCGGCGTGACGAGGAACACAATGGCGCTGACGGTGGTTATGGCGCGCACAAAGCTGTAAATCAGCGCCGAGAGGATCGCCGGGCGCAGCAGCGGCAGCAGGA                                                                                    <  SRR19973065.727477/150‑1 (MQ=60)
                                                                CCATCTTCCACGCGGTTGAGGATGTAAGCCGTCGCTACGCGGGTATCCGGCGTGACGAGGAACACAATGGCGCTGACGGTGGTTATGGCGCGCACAAAGCTGTAAATCAGCGCCGAGAGGATCGCCGGGCGCAGCAGCGGCAGCAGGATG                                                                                  <  SRR19973065.457442/150‑1 (MQ=60)
                                                                  ATCTTCCACGCGGTTGAGGATGTAAGCCGTCGCTACGCGGGTATCCGGCGTGACGAGGAACACAATGGCGCTGACGGTGGTTATGGTGCGCACAAAGCTGTAAATCAGCGCCGAGAGGATCGCCGGGCGCAGCAGCGGCAGCAGGATGTG                                                                                >  SRR19973065.456067/1‑150 (MQ=60)
                                                                  ATCTTCCACGCGGTTGAGGATGTAAGCCGTCGCTACGCGGGTATCCGGCGTGACGAGGAACACAATGGCGCTGACGGTGGTTATGGTGCGCACAAAGCTGTAAATCAGCGCCGAGAGGATCGCCGGGCGCAGCAGCGGCAGCAGGATGTG                                                                                >  SRR19973065.958656/1‑150 (MQ=60)
                                                                  ATCTTCCACGCGGTTGAGGATGTAAGCCGTCGCTACGCGGGTATCCGGCGTGACGAGGAACACAATGGCGCTGACGGTGGTTATGGTGCGCACAAAGCTGTAAATCAGCGCCGAGAGGATCGCCGGGCGCAGCAGCGGCAGCAGGATGTG                                                                                >  SRR19973065.958584/1‑150 (MQ=60)
                                                                  ATCTTCCACGCGGTTGAGGATGTAAGCCGTCGCTACGCGGGTATCCGGCGTGACGAGGAACACAATGGCGCTGACGGTGGTTATGGTGCGCACAAAGCTGTAAATCAGCGCCGAGAGGATCGCCGGGCGCAGCAGCGGCAGCAGGATGTG                                                                                >  SRR19973065.959214/1‑150 (MQ=60)
                                                                            CGGTTGAGGATGTAAGCCGTCGCTACGCGGGTATCCGGCGTGACGAGGAACACAATGGCGCTGACGGTGGTTATGGCGCGCACAAAGCTGTAAATCAGCGCCGAGAGGATCGCCGGGCGCAGCAGCGGCAGCAGGATGTGCGTAATGGTA                                                                      <  SRR19973065.2042534/150‑1 (MQ=60)
                                                                             GGTTGAGGATGTAAGCCGTCGCTACGCGGGTATCCGGCGTGACGAGGAACACAATGGCGCTGACGGTGGTTATGGCGCGCACAAAGCTGTAAATCAGCGCCGAGAGGATCGCCGGGCGCAGCAGCGGCAGCAGGATGTGCGTAATGGTAC                                                                     >  SRR19973065.1184895/1‑150 (MQ=60)
                                                                             GGTTGAGGATGTAAGCCGTCGCTACGCGGGTATCCGGCGTGACGAGGAACACAATGGCGCTGACGGTGGTTATGGCGCGCACAAAGCTGTAAATCAGCGCCGAGAGGATCGCCGGGCGCAGCAGCGGCAGCAGGATGTGCGTAATGGTAC                                                                     <  SRR19973065.459126/150‑1 (MQ=60)
                                                                             GGTTGAGGATGTAAGCCGTCGCTACGCGGGTATCCGGCGTGACGAGGAACACAATGGCGCTGACGGTGGTTATGGCGCGCACAAAGCTGTAAATCAGCGCCGAGAGGATCGCCGGGCGCAGCAGCGGCAGCAGGATGTGCGTAATGGTAC                                                                     <  SRR19973065.459149/150‑1 (MQ=60)
                                                                             GGTTGAGGATGTAAGCCGTCGCTACGCGGGTATCCGGCGTGACGAGGAACACAATGGCGCTGACGGTGGTTATGGCGCGCACAAAGCTGTAAATCAGCGCCGAGAGGATCGCCGGGCGCAGCAGCGGCAGCAGGATGTGCGTAATGGTAC                                                                     >  SRR19973065.68034/1‑150 (MQ=60)
                                                                             GGTTGAGGATGTAAGCCGTCGCTACGCGGGTATCCGGCGTGACGAGGAACACAATGGCGCTGACGGTGGTTATGGCGCGCACAAAGCTGTAAATCAGCGCCGAGAGGATCGCCGGGCGCAGCAGCGGCAGCAGGATGTGCGTAATGGTAC                                                                     >  SRR19973065.1253420/1‑150 (MQ=60)
                                                                             GGTTGAGGATGTAAGCCGTCGCTACGCGGGTATCCGGCGTGACGAGGAACACAATGGCGCTGACGGTGGTTATGGCGCGCACAAAGCTGTAAATCAGCGCCGAGAGGATCGCCGGGCGCAGCAGCGGCAGCAGGATGTGCGTAATGGTAC                                                                     >  SRR19973065.1253397/1‑150 (MQ=60)
                                                                             GGTTGAGGATGTAAGCCGTCGCTACGCGGGTATCCGGCGTGACGAGGAACACAATGGCGCTGACGGTGGTTATGGCGCGCACAAAGCTGTAAATCAGCGCCGAGAGGATCGCCGGGCGCAGCAGCGGCAGCAGGATGTGCGTAATGGTAC                                                                     >  SRR19973065.3047118/1‑150 (MQ=60)
                                                                             GGTTGAGGATGTAAGCCGTCGCTACGCGGGTATCCGGCGTGACGAGGAACACAATGGCGCTGACGGTGGTTATGGCGCGCACAAAGCTGTAAATCAGCGCCGAGAGGATCGCCGGGCGCAGCAGCGGCAGCAGGATGTGCGTAATGGTAC                                                                     >  SRR19973065.2030341/1‑150 (MQ=60)
                                                                                TGAGGATGTAAGCCGTCGCTACGCGGGTATCCGGCGTGACGAGGAACACAATGGCGCTGACGGTGGTTATGGCGCGCACAAAGCTGTAAATCAGCGCCGAGAGGATCGCCGGGCGCAGCAGCGGCAGCAGGATGTGCGTAATGGTACGCA                                                                  >  SRR19973065.278827/1‑150 (MQ=60)
                                                                                      TGTAAGCCGTCGCTACGCGGGTATCCGGCGTGACGAGGAACACAATGGCGCTGACGGTGGTTATGGCGCGCACAAAGCTGTAAATCAGCGCCGAGAGGATCGCCGGGCGCAGCAGCGGCAGCAGGATGTGCGTAATGGTACGCAGGGAAC                                                            >  SRR19973065.2864402/1‑150 (MQ=60)
                                                                                      TGTAAGCCGTCGCTACGCGGGTATCCGGCGTGACGAGGAACACAATGGCGCTGACGGTGGTTATGGCGCGCACAAAGCTGTAAATCAGCGCCGAGAGGATCGCCGGGCGCAGCAGCGGCAGCAGGATGTGCGTAATGGTACGCAGGGAAC                                                            >  SRR19973065.3309789/1‑150 (MQ=60)
                                                                                      TGTAAGCCGTCGCTACGCGGGTATCCGGCGTGACGAGGAACACAATGGCGCTGACGGTGGTTATGGCGCGCACAAAGCTGTAAATCAGCGCCGAGAGGATCGCCGGGCGCAGCAGCGGCAGCAGGATGTGCGTAATGGTACGCAGGGAAC                                                            >  SRR19973065.1882366/1‑150 (MQ=60)
                                                                                      TGTAAGCCGTCGCTACGCGGGTATCCGGCGTGACGAGGAACACAATGGCGCTGACGGTGGTTATGGCGCGCACAAAGCTGTAAATCAGCGCCGAGAGGATCGCCGGGCGCAGCAGCGGCAGCAGGATGTGCGTAATGGTACGCAGGGAAC                                                            <  SRR19973065.2393159/150‑1 (MQ=60)
                                                                                       GTAAGCCGTCGCTACGCGGGTATCCGGCGTGACGAGGAACACAATGGCGCTGACGGTGGTTATGGCGCGCACAAAGCTGTAAATCAGCGCCGAGAGGATCGCCGGGCGCAGCAGCGGCAGCAGGATGTGCGTAATGGTACGCAGGGAACC                                                           <  SRR19973065.1603316/150‑1 (MQ=60)
                                                                                           GCCGTCGCTACGCGGGTATCCGGCGTGACGAGGAACACAATGGCGCTGACGGTGGTTATGGCGCGCACAAAGCTGTAAATCAGCGCCGAGAGGATCGCCGGGCGCAGCAGCGGCAGCAGGATGTGCGTAATGGTACGCAGGGAACCGGCG                                                       >  SRR19973065.1858942/1‑150 (MQ=60)
                                                                                                 GCTACGCGGGTATCCGGCGTGACGAGGAACACAATGGCGCTGACGGTGGTTATGGCGCGCACAAAGCTTTAAATCAGCGCCGAGAGGATCGCCGGGCGCAGCAGCGGCAGCAGGATGTGCGTAATGGTACGCAGGGAACCGGCGCGCAGG                                                 <  SRR19973065.3256976/150‑1 (MQ=60)
                                                                                                      GGGGGTATCGGGCGTGACGAGGAACACTATGGCGCTGACGGTGGTTATGGCGCGCACAAAGCTGTAAATCAGCGCCGAGAGGATCGCCGGGCGCAGCAGCGGCAGCAGGATGTGCGTAATGGTACGCAGGGAACCGGCGCGCAGGCTGAG                                            <  SRR19973065.1203174/150‑1 (MQ=60)
                                                                                                       CGGGTATCCGGCGTGACGAGGAACACAATGGCGCTGACGGTGGTTATGGCGCGCACAAAGCTGTAAATCAGCGCCGAGAGGATCGCCGGGCGCAGCAGCGGCAGCAGGATGTGCGTAATGGTACGCAGGGAACCGGCGCGCAGGCTGAGT                                           >  SRR19973065.1612436/1‑150 (MQ=60)
                                                                                                          GTATCCGGCGTGACGAGGAACACAATGGCGCTGACGGTGGTTATGGCGCGCACAAAGCTGTAAATCAGCGCCGAGAGGATCGCCGGGCGCAGCAGCGGCAGCAGGATGTGCGTAATGGTACGCAGGGAACCGGCGCGCAGGCTGAGTGAG                                        <  SRR19973065.2571922/150‑1 (MQ=60)
                                                                                                          GTATCCGGCGTGACGAGGAACACAATGGCGCTGACGGTGGTTATGGCGCGCACAAAGCTGTAAATCAGCGCCGAGAGGATCGCCGGGCGCAGCAGCGGCAGCAGGATGTGCGTAATGGTACGCAGGGAACCGGCGCGCAGGCTGAGTGAG                                        <  SRR19973065.2573603/150‑1 (MQ=60)
                                                                                                          GTATCCGGCGTGACGAGGAACACAATGGCGCTGACGGTGGTTATGGCGCGCACAAAGCTGTAAATCAGCGCCGAGAGGATCGCCGGGCGCAGCAGCGGCAGCAGGATGTGCGTAATGGTACGCAGGGAACCGGCGCGCAGGCTGAGTGAG                                        <  SRR19973065.2274475/150‑1 (MQ=60)
                                                                                                          GTATCCGGCGTGACGAGGAACACAATGGCGCTGACGGTGGTTATGGCGCGCACAAAGCTGTAAATCAGCGCCGAGAGGATCGCCGGGCGCAGCAGCGGCAGCAGGATGTGCGTAATGGTACGCAGGGAACCGGCGCGCAGGCTGAGTGAG                                        <  SRR19973065.535892/150‑1 (MQ=60)
                                                                                                           TATCCGGCGTGACGAGGAACACAATGGCGCTGACGGTGGTTATGGCGCGCACAAAGCTGTAAATCAGCGCCGAGAGGATCGCCGGGCGCAGCAGCGGCAGCAGGATGTGCGTAATGGTACGCAGGGAACCGGCGCGCAGGCTGAGTGAGG                                       >  SRR19973065.1231727/1‑150 (MQ=60)
                                                                                                           TATCCGGCGTGACGAGGAACACAATGGCGCTGACGGTGGTTATGGCGCGCACAAAGCTGTAAATCAGCGCCGAGAGGATCGCCGGGCGCAGCAGCGGCAGCAGGATGTGCGTAATGGTACGCAGGGAACCGGCGCGCAGGCTGAGTGAGG                                       >  SRR19973065.2993783/1‑150 (MQ=60)
                                                                                                            ATCCGGCGTGACGAGGAACACAATGGCGCTGACGGTGGTTATGGCGCGCACAAAGCTGTAAATCAGCGCCGAGAGGATCGCCGGGCGCAGCAGCGGCAGCAGGATGTGCGTAATGGTACGCAGGGAACCGGCGCGCAGGCTGAGTGAGGC                                      >  SRR19973065.828209/1‑150 (MQ=60)
                                                                                                               CGGCGTGACGAGGAACACAATGGCGCTGACGGTGGTTATGGCGCGCACAAAGCTGTAAATCAGCGCCGAGAGGATCGCCGGGCGCAGCAGCGGCAGCAGGATGTGCGTAATGGTACGCAGGGAACCGGCGCGCAGGCTGAGTGAGGCTTC                                   >  SRR19973065.2665114/1‑150 (MQ=60)
                                                                                                                  CGTGACGAGGAACACAATGGCGCTGACGGTGGTTATGGCGCGCACAAAGCTGTAAATCAGCGCCGAGAGGATCGCCGGGCGCAGCAGCGGCAGCAGGATGTGCGTAATGGTACGCAGGGAACCGGCGCGCAGGCTGAGTGAGGCTTCATC                                >  SRR19973065.1850630/1‑150 (MQ=60)
                                                                                                                  CGTGACGAGGAACACAATGGCGCTGACGGTGGTTATGGCGCGCACAAAGCTGTAAATCAGCGCCGAGAGGATCGCCGGGCGCAGCAGCGGCAGCAGGATGTGCGTAATGGTACGCAGGGAACCGGCGCGCAGGCTGAGTGAGGCTTCATC                                <  SRR19973065.152913/150‑1 (MQ=60)
                                                                                                                  CGTGACGAGGAACACAATGGCGCTGACGGTGGTTATGGCGCCCACAAAGCTGTAAATCAGCGCCGAGAGGATCGCCGGGCGCAGCAGCGGCAGCAGGATGTGCGTAATGGTACGCAGGGAACCGGCGCGCAGGCTGAGTGAGGCTTCATC                                <  SRR19973065.153040/150‑1 (MQ=60)
                                                                                                                      ACGAGGAACACAATGGCGCTGACGGTGGTTATGGCGCGCACAAAGCTGTAAATCAGCGCCGAGAGGATCGCCGGGCGCAGCAGCGGCAGCAGGATGTGCGTAATGGTACGCAGGGAACCGGCGCGCAGGCTGAGTGAGGCTTCATCGAGC                            >  SRR19973065.1939990/1‑150 (MQ=60)
                                                                                                                           GAACACAATGGCGCTGACGGTGGTTATGGCGCGCACAAAGCTGTAAATCAGCGCCGAGAGGATCGCCGGGCGCAGCAGCGGCAGCAGGATGTGCGTAATGGTACGCAGGGAACCGGCGCGCAGGCTGAGTGAGGCTTCATCGAGCGATTT                       <  SRR19973065.889860/150‑1 (MQ=60)
                                                                                                                           GAACACAATGGCGCTGACGGTGGTTATGGCGCGCACAAAGCTGTAAATCAGCGCCGAGAGGATCGCCGGGCGCAGCAGCGGCAGCAGGATGTGCGTAATGGTACGCAGGGAACCGGCGCGCAGGCTGAGTGAGGCTTCATCGAGCGATTT                       <  SRR19973065.2177549/150‑1 (MQ=60)
                                                                                                                            AACACAATGGCGCTGACGGTGGTTATGGCGCGCACAAAGCTGTAAATCAGCGCCGAGAGGATCGCCGGGCGCAGCAGCGGCAGCAGGATGTGCGTAATGGTACGCAGGGAACCGGCGCGCAGGCTGAGTGAGGCTTCATCGAGCGATTTA                      >  SRR19973065.3181533/1‑150 (MQ=60)
                                                                                                                             ACACAATGGCGCTGACGGTGGTTTTGGCGCGCACAAAGCTTTAAATCAGCGCCGAGAGGATCGCCGGGCGCAGCAGCGGCAGCAGGATGTGCGTAATGGTACGCAGGGAACCGGCGCGCAGGCTGAGTGAGGCTTCATCGAGCGATTTAT                     <  SRR19973065.1510914/150‑1 (MQ=60)
                                                                                                                             ACACAATGGCGCTGACGGTGGTTATGGCGCGCACAAAGCTGTAAATCAGCGCCGAGAGGATCGCCGGGCGCAGCAGCGGCAGCAGGATGTGCGTAATGGTACGCAGGGAACCGGCGCGCAGGCTGAGTGAGGCTTCATCGAGCGATTTAT                     <  SRR19973065.3448713/150‑1 (MQ=60)
                                                                                                                             ACACAATGGCGCTGACGGTGGTTATGGCGCGCACAAAGCTGTAAATCAGCGCCGAGAGGATCGCCGGGCGCAGCAGCGGCAGCAGGATGTGCGTAATGGTACGCAGGGAACCGGCGCGCAGGCTGAGTGAGGCTTCATCGAGCGATTTAT                     <  SRR19973065.2073661/150‑1 (MQ=60)
                                                                                                                                  ATGGCGCTGACGGTGGTTATGGCGCGCACAAAGCTGTAAATCAGCGCCGAGAGGATCGCCGGGCGCAGCAGCGGCAGCAGGATGTGCGTAATGGTACGCAGGGAACCGGCGCGCAGGCTGAGTGAGGCTTCATCGAGCGATTTATCGATT                <  SRR19973065.2258368/150‑1 (MQ=60)
                                                                                                                                   TGGCGCTGACGGTGGTTATGGCGCGCACAAAGCTGTAAATCAGCGCCGAGAGGATCGCCGGGCGCAGCAGCGGCAGCAGGATGTGCGTAATGGTACGCAGGGAACCGGCGCGCAGGCTGAGTGAGGCTTCATCGAGCGATTTATCGATTT               <  SRR19973065.1750100/150‑1 (MQ=60)
                                                                                                                                   TGGCGCTGACGGTGGTTATGGCGCGCACAAAGCTGTAAATCAGCGCCGAGAGGATCGCCGGGCGCAGCAGCGGCAGCAGGATGTGCGTAATGGTACGCAGGGAACCGGCGCGCAGGCTGAGTGAGGCTTCATCGAGCGATTTATCGATTT               <  SRR19973065.1750382/150‑1 (MQ=60)
                                                                                                                                        CTGACGGTGGTTATGGCGCGCACAAAGCTGTAAATCAGCGCCGAGAGGATCGCCGGGCGCAGCAGCGGCAGCAGGATGTGCGTAATGGTACGCAGGGAACCGGCGCGCAGGCTGAGTGAGGCTTCATCGAGCGATTTATCGATTTGGCCC          <  SRR19973065.2020496/150‑1 (MQ=60)
                                                                                                                                         TGACGGTGGTTATGGCGCGCACAAAGCTGTAAATCAGCGCCGAGAGGATCGCCGGGCGCAGCAGCGGCAGCAGGATGTGCGTAATGGTACGCAGGGAACCGGCGCGCAGGCTGAGTGAGGCTTCATCGAGCGATTTATCGATTTGGCCCG         <  SRR19973065.1438522/150‑1 (MQ=60)
                                                                                                                                                GGTTATGGCGCGCACAAAGCTGTAAATCAGCGCCGAGAGGATCGCCGGGCGCAGCAGCGGCAGCAGGATGTGCGTAATGGTACGCAGGGAACCGGCGCGCAGGCTGAGTGAGGCTTCATCGAGCGATTTATCGATTTGGCCCGGTAATGA  >  SRR19973065.1852646/1‑150 (MQ=60)
                                                                                                                                                GGTTATGGCGCGCACAAAGCTGTAAATCAGCGCCGAGAGGATCGCCGGGCGCAGCAGCGGCAGCAGGATGTGCGTAATGGTACGCAGGGAACCGGCGCGCAGGCTGAGTGAGGCTTCATCGAGCGATTTATCGATTTGGCCCGGTAATGA  <  SRR19973065.1301389/150‑1 (MQ=60)
                                                                                                                                                GGTTATGGCGCGCACAAAGCTGTAAATCAGCGCCGAGAGGATCGCCGGGCGCAGCAGCGGCAGCAGGAGGGGCGTAAGGGTACGCAGCGAACCGGCGCGCCGGCTGCGTGAGGgtgccgcgagcgaggtcgcgagtgggcgcgggccggg  >  SRR19973065.1852861/1‑113 (MQ=60)
                                                                                                                                                   |                                                                                                                                                  
GAAAATAATCGCCAGCATCACCACGATCAGAATGGAACCGTAGGCAATCGCTACACCGTATTCGCCATCTTCCACGCGGTTGAGGATGTAAGCCGTCGCTACGCGGGTATCCGGCGTGACGAGGAACACAATGGCGCTGACGGTGGTAATGGCGCGCACAAAGCTGTAAATCAGCGCCGAGAGGATCGCCGGGCGCAGCAGCGGCAGCAGGATGTGCGTAATGGTACGCAGGGAACCGGCGCGCAGGCTGAGTGAGGCTTCATCGAGCGATTTATCGATTTGGCCCGGTAATGA  >  CP009273/274588‑274881

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑