Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F247 I0 R1
|
1496 |
299.8 |
9582018 |
97.8% |
9371213 |
149.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
CP009273 |
811,920 |
C→A |
23.4% |
D62Y (GAT→TAT) |
ybhK ← |
putative NAD(P)‑binding transferase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | CP009273 | 811,920 | 0 | C | A | 23.4%
| 782.4
/ 178.6
| 314 | D62Y (GAT→TAT) | ybhK | putative NAD(P)‑binding transferase |
| Reads supporting (aligned to +/- strand): ref base C (134/106); new base A (41/33); total (175/139) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 314 total aligned reads displayed.
GCCGCACGCTAAGGTGATCCAGCGCCTTTAACATCAAGTTTCCGAGATTATGACCGGAAAGTTCGCCATTGCCACCAAAACGGTATTCAAACATCGCGGAGGCGACGCTCGGTTCCGTTATCAGCTGGTTGAGGCAGTTGCGCATATCGCCCCAGGCAATGCCGCCTTCTGAACGGCGAATACGCCCCGTCGAGCCACCATTATCGGTGGTGGTGACGATACCCGTTAAACGAGAACCCAAAGACGAAAGTGATGAGAGAACGCGTCCCAGTCCATGCCCTCCGCCGAGAGCAAC > CP009273/811773‑812067
|
gCCGCACGCTAAGGTGATCCAGCGCCTTTAACATCAAGTTTCCGAGATTATGACCGGAAAGTTCGCCATTGCCACCAAAACGGTATTCAAACATCGCGGAGGCGACGCTCGGTTCCGTTATCAGCTGGTTGAGGCAGTTGCGCATATCg > 1:4692579/1‑149 (MQ=255)
gCCGCACGCTAAGGTGATCCAGCGCCTTTAACATCAAGTTTCCGAGATTATGACCGGAAAGTTCGCCATTGCCACCAAAACGGTATTCAAACATCGCGGAGGCGACGCTCGGTTCCGTTATCAGCTGGTTGAGGCAGTTGCGCATATCg > 2:1089676/1‑149 (MQ=255)
cGCTAAGGTGATCCAGCGCCTTTAACATCAAGTTTCCGAGATTATGACCGGAAAGTTCGCCATTGCCACCAAAACGGTATTCAAACATCGCGGAGGCGACGCTCGGTTCCGTTATCAGCTGGTTGAGGCAGTTGCGCATATCGCCCCAg < 2:2061218/149‑1 (MQ=255)
tAAGGTGATCCAGCGCCTTTAACATCAAGTTTCCGAGATTATGACCGGAAAGTTCGCCATTGCCACCAAAACGGTATTCAAACATCGCGGAGGCGACGCTCGGTTCCGTTATCAGCTGGTTGAGGCAGTTGCGCATATCGCCCCAGGCa > 2:3007033/1‑149 (MQ=255)
tAAGGTGATCCAGCGCCTTTAACATCAAGTTTCCGAGATTATGACCGGAAAGTTCGCCATTGCCACCAAAACGGTATTCAAACATCGCGGAGGCGACGCTCGGTTCCGTTATCAGCTGGTTGAGGCAGTTGCGCATATCGCCCCAGGCa > 1:2954215/1‑149 (MQ=255)
tAAGGTGATCCAGCGCCTTTAACATCAAGTTTCCGAGATTATGACCGGAAAGTTCGCCATTGCCACCAAAACGGTATTCAAACATCGCGGAGGCGACGCTCGGTTCCGTTATCAGCTGGTTGAGGCAGTTGCGCATATAGCCCCAGGCa > 2:3328090/1‑149 (MQ=255)
aaGGTGATCCAGCGCCTTTAACATCAAGTTTCCGAGATTATGACCGGAAAGTTCGCCATTGCCACCAAAACGGTATTCAAACATCGCGGAGGCGACGCTCGGTTCCGTTATCAGCTGGTTGAGGCAGTTGCGCATATCGCCCCAGGCaa < 1:2015467/149‑1 (MQ=255)
aGGTGATCCAGCGCCTTTAACATCAAGTTTCCGAGATTATGACCGGAAAGTTCGCCATTGCCACCAAAACGGTATTCAAACATCGCGGAGGCGACGCTCGGTTCCGTTATCAGCTGGTTGAGGCAGTTGCGCATATCGCCCCAGGCAAt < 2:2223793/149‑1 (MQ=255)
gTGATCCAGCGCCTTTAACATCAAGTTTCCGAGATTATGACCGGAAAGTTCGCCATTGCCACCAAAACGGTATTCAAACATCGCGGAGGCGACGCTCGGTTCCGTTATCAGCTGGTTGAGGCAGTTGCGCATATCGCCCCAGGCAATgc < 2:2181938/149‑1 (MQ=255)
gATCCAGCGCCTTTAACATCAAGTTTCCGAGATTATGACCGGAAAGTTCGCCATTGCCACCAAAACGGTATTCAAACATCGCGGAGGCGACGCTCGGTTCCGTTATCAGCTGGTTGAGGCAGTTGCGCATATCGCCCCAGGCAATgccg > 2:3791940/1‑149 (MQ=255)
tCCAGCGCCTTTAACATCAAGTTTCCGAGATTATGACCGGAAAGTTCGCCATTGCCACCAAAACGGTATTCAAACATCGCGGAGGCGACGCTCGGTTCCGTTATCAGCTGGTTGAGGCAGTTGCGCATATCGCCCCAGGCAATgccgcc > 2:391577/1‑149 (MQ=255)
cAGCGCCTTTAACATCAAGTTTCCGAGATTATGACCGGAAAGTTCGCCATTGCCACCAAAACGGTATTCAAACATCGCGGAGGCGACGCTCGGTTCCGTTATCAGCTGGTTGAGGCAGTTGCGCATATAGCCCCAGGCAATGCCGCCtt < 1:2915433/149‑1 (MQ=255)
aGCGCCTTTAACATCAAGTTTCCGAGATTATGACCGGAAAGTTCGCCATTGCCACCAAAACGGTATTCAAACATCGCGGAGGCGACGCTCGGTTCCGTTATCAGCTGGTTGAGGCAGTTGCGCATATAGCCCCAGGCAATGCCGCCATc > 2:1826868/1‑149 (MQ=255)
ccTTTAACATCAAGTTTCCGAGATTATGACCGGAAAGTTCGCCATTGCCACCAAAACGGTATTCAAACATCGCGGAGGCGACGCTCGGTTCCGTTATCAGCTGGTTGAGGCAGTTGCGCATATAGCCCCAGGCAATGCCGCCTTCTGaa > 1:3107513/1‑149 (MQ=255)
cTTTAACATCAAGTTTCCGAGATTATGACCGGAAAGTTCGCCATTGCCACCAAAACGGTATTCAAACATCGCGGAGGCGACGCTCGGTTCCGTTATCAGCTGGTTGAGGCAGTTGCGCATATCGCCCCAGGCAATGCCGCCTTCTGAAc < 1:1897999/149‑1 (MQ=255)
cTTTAACATCAAGTTTCCGAGATTATGACCGGAAAGTTCGCCATTGCCACCAAAACGGTATTCAAACATCGCGGAGGCGACGCTCGGTTCCGTTATCAGCTGGTTGAGGCAGTTGCGCATATCGCCCCAGGCAATGCCGCCTTCTGAAc > 2:839984/1‑149 (MQ=255)
tttAACATCAAGTTTCCGAGATTATGACCGGAAAGTTCGCCATTGCCACCAAAACGGTATTCAAACATCGCGGAGGCGACGCTCGGTTCCGTTATCAGCTGGTTGAGGCAGTTGCGCATATAGCCCCAGGCAATGCCGCCTTCTGAACg < 2:3614068/149‑1 (MQ=255)
ttAACATCAAGTTTCCGAGATTATGACCGGAAAGTTCGCCATTGCCACCAAAACGGTATTCAAACATCGCGGAGGCGACGCTCGGTTCCGTTATCAGCTGGTTGAGGCAGTTGCGCATATCGCCCCAGGCAATGCCGCCTTCTGAACgg > 2:3887959/1‑149 (MQ=255)
ttAACATCAAGTTTCCGAGATTATGACCGGAAAGTTCGCCATTGCCACCAAAACGGTATTCAAACATCGCGGAGGCGACGCTCGGTTCCGTTATCAGCTGGTTGAGGCAGTTGCGCATATAGCCCCAGGCAATGCCGCCTTCTGAACgg < 2:1014962/149‑1 (MQ=255)
ttAACATCAAGTTTCCGAGATTATGACCGGAAAGTTCGCCATTGCCACCAAAACGGTATTCAAACATCGCGGAGGCGACGCTCGGTTCCGTTATCAGCTGGTTGAGGCAGTTGCGCATATAGCCCCAGGCAATGCCGCCTTCTGAACgg < 1:3960605/149‑1 (MQ=255)
aaCATCAAGTTTCCGAGATTATGACCGGAAAGTTCGCCATTGCCACCAAAACGGTATTCAAACATCGCGGAGGCGACGCTCGGTTCCGTTATCAGCTGGTTGAGGCAGTTGCGCATATCGCCCCAGGCAATGCCGCCTTCTGAACGGCg < 1:295593/149‑1 (MQ=255)
cATCAAGTTTCCGAGATTATGACCGGAAAGTTCGCCATTGCCACCAAAACGGTATTCAAACATCGCGGAGGCGACGCTCGGTTCCGTTATCAGCTGGTTGAGGCAGTTGCGCATATCGCCCCAGGCAATGCCGCCTTCTGAACGGCGaa < 1:2560501/149‑1 (MQ=255)
aTCAAGTTTCCGAGATTATGACCGGAAAGTTCGCCATTGCCACCAAAACGGTATTCAAACATCGCGGAGGCGACGCTCGGTTCCGTTATCAGCTGGTTGAGGCAGTTGCGCATATCGCCCCAGGCAATGCCGCCTTCTGAACGGCGAAt < 2:1996927/149‑1 (MQ=255)
aTCAAGTTTCCAAGATTATGACCGGAAAGTTCGCCATTGCCACCAAAACGGTATTCAAACATCGCGGAGGCGACGCTCGGTTCCGTTATCAGCTGGTTGAGGCAGTTGCGCATATCGCCCCAGGCAATGCCGCCTTCTGAACGGCGAAt < 2:15646/149‑1 (MQ=255)
aGTTTCCGAGATTATGACCGGAAAGTTCGCCATTGCCACCAAAACGGTATTCAAACATCGCGGAGGCGACGCTCGGTTCCGTTATCAGCTGGTTGAGGCAGTTGCGCATATCGCCCCAGGCAATGCCGCCTTCTGAACGGCGAATACGc > 2:1438345/1‑149 (MQ=255)
gTTTCCGAGATTATGACCGGAAAGTTCGCCATTGCAACCAAAACGGTATTCAAACATCGCGGAGGCGACGCTCGGTTCCGTTATCAGCTGGTTGAGGCAGTTGCGCATATCGCCCCAGGCAATGCCGCCTTCTGAACGGCGAATACGcc > 1:1534823/1‑149 (MQ=255)
ttCCGAGATTATGACCGGAAAGTTCGCCATTGCCACCAAAACGGTATTCAAACATCGCGGAGGCGACGCTCGGTTCCGTTATCAGCTGGTTGAGGCAGTTGCGCATATAGCCCCAGGCAATGCCGCCTTCTGAACGGCGAATACGcccc < 1:3465413/149‑1 (MQ=255)
tCCGAGATTATGACCGGAAAGTTCGCCATTGCCACCAAAACGGTATTCAAACATCGCGGAGGCGACGCTCGGTTCCGTTATCAGCTGGTTGAGGCAGTTGCGCATATAGCCCCAGGCAATGCCGCCTTCTGAACGGCGAATACGCCCCg > 2:1774876/1‑149 (MQ=255)
ccGAGATTATGACCGGAAAGTTCGCCATTGCCACCAAAACGGTATTCAAACATCGCGGAGGCGACGCTCGGTTCCGTTATCAGCTGGTTGAGGCAGTTGCGCATATCGCCCCAGGCAATGCCGCCTTCTGAACGGCGAATACGCCCCGt < 2:4720195/149‑1 (MQ=255)
ccGAGATTATGACCGGAAAGTTCGCCATTGCCACCAAAACGGTATTCAAACATCGCGGAGGCGACGCTCGGTTCCGTTATCAGCTGGTTGAGGCAGTTGCGCATATCGCCCCAGGCAATGCCGCCTTCTGAACGGCGAATACGCCCCGt > 2:3412294/1‑149 (MQ=255)
agaTTATGACCGGAAAGTTCGCCATTGCCACCAAAACGGTATTCAAACATCGCGGAGGCGACGCTCGGTTCCGTTATCAGCTGGTTGAGGCAGTTGCGCATATAGCCCCAGGCAATGCCGCCTTCTGAACGGCGAATACGCCCCGTCGa < 2:3462662/149‑1 (MQ=255)
gaTTATGACCGGAAAGTTCGCCATTGCCACCAAAACGGTATTCAAACATCGCGGAGGCGACGCTCGGTTCCGTTATCAGCTGGTTGAGGCAGTTGCGCATATAGCCCCAGGCAATGCCGCCTTCTGAACGGCGAATACGCCCCGTCGAg > 1:297927/1‑149 (MQ=255)
aTTATGACCGGAAAGTTCGCCATTGCCACCAAAACGGTATTCAAACATCGCGGAGGCGACGCTCGGTTCCGTTATCAGCTGGTTGAGGCAGTTGCGCATATCGCCCCAGGCAATGCCGCCTTCTGAACGGCGAATACGCCCCGTCGAGc > 2:2613465/1‑149 (MQ=255)
ttATGACCGGAAAGTTCGCCATTGCCACCAAAACGGTATTCAAACATCGCGGAGGCGACGCTCGGTTCCGTTATCAGCTGGTTGAGGCAGTTGCGCATATCGCCCCAGGCACTGCCGCCTTCTGAACGGCGAATACGCCCCGTCGAGcc > 2:3031640/1‑149 (MQ=255)
ttATGACCGGAAAGTTCGCCATTGCCACCAAAACGGTATTCAAACATCGCGGAGGCGACGCTCGGTTCCGTTATCAGCTGGTTGAGGCAGTTGCGCATATCGCCCCAGGCAATGCCGCCTTCTGAACGGCGAATACGCCCCGTCGAGcc < 1:4218620/149‑1 (MQ=255)
aTGACCGGAAAGTTCGCCATTGCCACCAAAACGGTATTCAAACATCGCGGAGGCGACGCTCGGTTCCGTTATCAGCTGGTTGAGGCAGTTGCGCATATCGCCCCAGGCAATGCCGCCTTCTGAACGGCGAATACGCCCCGTCGAGccac > 1:1667824/1‑149 (MQ=255)
tGACCGGAAAGTTCGCCATTGCCACCAAAACGGTATTCAAACATCGCGGAGGCGACGCTCGGTTCCGTTATCAGCTGGTTGAGGCAGTTGCGCATATCGCCCCAGGCAATGCCGCCTTCTGAACGGCGAATACGCCCCGTCGAGccacc < 2:2343290/149‑1 (MQ=255)
gACCGGAAAGTTCGCCATTGCCACCAAAACGGTATTCAAACATCGCGGAGGCGACGCTCGGTTCCGTTATCAGCTGGTTGAGGCAGTTGCGCATATAGCCCCAGGCAATGCCGCCTTCTGAACGGCGAATACGCCCCGTCGAGccacca > 1:4455459/1‑149 (MQ=255)
aCCGGAAAGTTCGCCATTGCCACCAAAACGGTATTCAAACATCGCGGAGGCGACGCTCGGTTCCGTTATCAGCTGGTTGAGGCAGTTGCGCATATCGCCCCAGGCAATGCCGCCTTCTGAACGGCGAATACGCCCCGTCGAGCCACCAt > 2:1591925/1‑149 (MQ=255)
aCCGGAAAGTTCGCCATTGCCACCAAAACGGTATTCAAACATCGCGGAGGCGACGCTCGGTTCCGTTATCAGCTGGTTGAGGCAGTTGCGCATATAGCCCCAGGCAATGCCGCCTTCTGAACGGCGAATACGCCCCGTCGAGCCACCAt < 2:2109918/149‑1 (MQ=255)
aCCGGAAAGTTCGCCATTGCCACCAAAACGGTATTCAAACATCGCGGAGGCGACGCTCGGTTCCGTTATCAGCTGGTTGAGGCAGTTGCGCATATAGCCCCAGGCAATGCCGCCTTCTGAACGGCGAATACGCCCCGTCGAGCCACCAt < 2:2109869/149‑1 (MQ=255)
aCCGGAAAGTTCGCCATTGCCACCAAAACGGTATTCAAACATCGCGGAGGCGACGCTCGGTTCCGTTATCAGCTGGTTGAGGCAGTTGCGCATATAGCCCCAGGCAATGCCGCCTTCTGAACGGCGAATACGCCCCGTCGAGCCACCAt < 2:894341/149‑1 (MQ=255)
aCCGGAAAGTTCGCCAGTGCCACCAAAACGGTATTCAAACATCGCGGAGGCGACGCTCGGTTCCGTTATCAGCTGGTTGAGGCAGTTGCGCATATCGCCCCAGGCAATGCCGCCTTCTGAACGGCGAATACGCCCCGTCGAGCCACCAt < 2:532367/149‑1 (MQ=255)
ccGGAAAGTTCGCCATTGCCACCAAAACGGTATTCAAACATCGCGGAGGCGACGCTCGGTTCCGTTATCAGCTGGTTGAGGCAGTTGCGCATATCGCCCCAGGCAATGCCGCCTTCTGAACGGCGAATACGCCCCGTCGAGCCACCAtt > 1:504965/1‑149 (MQ=255)
ccGGAAAGTTCGCCATTGCCACCAAAACGGTATTCAAACATCGCGGAGGCGACGCTCGGTTCCGTTATCAGCTGGTTGAGGCAGTTGCGCATATAGCCCCAGGCAATGCCGCCTTCTGAACGGCGAATACGCCCCGTCGAGCCACCAtt > 1:4325894/1‑149 (MQ=255)
ggAAAGTTCGCCATTGCCACCAAAACGGTATTCAAACATCGCGGAGGCGACGCTCGGTTCCGTTATCAGCTGGTTGAGGCAGTTGCGCATATCGCCCCAGGCAATGCCGCCTTCTGAACGGCGAATACGCCCCGTCGAGCCACCATTAt < 1:3830830/149‑1 (MQ=255)
ggAAAGTTCGCCATTGCCACCAAAACGGTATTCAAACATCGCGGAGGCGACGCTCGGTTCCGTTATCAGCTGGTTGAGGCAGTTGCGCATATAGCCCCAGGCAATGCCGCCTTCTGAACGGCGAATACGCCCCGTCGAGCCACCATTAt < 1:1554829/149‑1 (MQ=255)
aaGTTCGCCATTGCCACCAAAACGGTATTCAAACATCGCGGAGGCGACGCTCGGTTCCGTTATCAGCTGGTTGAGGCAGTTGCGCATATCGCCCCAGGCAATGCCGCCTTCTGAACGGCGAATACGCCCCGTCGAGCCACCATTATCgg < 2:51998/149‑1 (MQ=255)
aGTTCGTCATTGCCACCAAAACGGTATTCAAACATCGCGGAGGCGACGCTCGGTTCCGTTATCAGCTGGTTGAGGCAGTTGCGCATATCGCCCCAGGCAATGCCGCCTTCTGAACGGCGAATACGCCCCGTCGAGCCACCATTATCggt > 2:2930897/1‑149 (MQ=255)
aGTTCGCCATTGCCACCAAAACGGTATTCAAACATCGCGGAGGCGACGCTCGGTTCCGTTATCAGCTGGTTGAGGCAGTTGCGCATATCGCCCCAGGCAATGCCGCCTTCTGAACGGCGAATACGCCCCGTCGAGCCACCATTATCggt > 2:1115193/1‑149 (MQ=255)
aGTTCGCCATTGCCACCAAAACGGTATTCAAACATCGCGGAGGCGACGCTCGGTTCCGTTATCAGCTGGTTGAGGCAGTTGCGCATATAGCCCCAGGCAATGCCGCCTTCTGAACGGCGAATACGCCCCGTCGAGCCACCATTATCggt > 1:1239525/1‑149 (MQ=255)
gTTCGCCATTGCCACCAAAACGGTATTCAAACATCGCGGAGGCGACGCTCGGTTCCGTTATCAGCTGGTTGAGGCAGTTGCGCATATAGCCCCAGGCAATGCCGCCTTCTGAACGGCGAATACGCCCCGTCGAGCCACCATTATCggtg > 1:1245146/1‑149 (MQ=255)
tCGCCATTGCCACCAAAACGGTATTCAAACATCGCGGAGGCGACGCTCGGTTCCGTTATCAGCTGGTTGAGGCAGTTGCGCATATCGCCCCAGGCAATGCCGCCTTCTGAACGGCGAATACGCCCCGTCGAGCCACCATTATCggtggt < 1:3713529/149‑1 (MQ=255)
ccATTGCCACCAAAACTGTATTCAAACATCGCGGAGGCGACGCTCGGTTCCGTTATCAGCTGGTTGAGGCAGTTGCGCATATAGCCCCAGGCAATGCCGCCTTCTGAACGGCGAATACGCCCCGTCGAGCCACCATTATCggtggtggt > 2:1070519/1‑149 (MQ=255)
ccATTGCCACCAAAACGGTATTCAAACATCGCGGAGGCGACGCTCGGTTCCGTTATCAGCTGGTTGAGGCAGTTGCGCATATCGCCCCAGGCAATGCCGCCTTCTGAACGGCGAATACGCCCCGTCGAGCCACCATTATCggtggtggt > 1:1047106/1‑149 (MQ=255)
aTTGCCACCAAAACGGTATTCAAACATCGCGGAGGCGACGCTCGGTTCCGTTATCAGCTGGTTGAGGCAGTTGCGCATATCGCCCCAGGCAATGCCGCCTTCTGAACGGCGAATACGCCCCGTCGAGCCACCATTATCGGTGGTGGTGa < 1:547921/149‑1 (MQ=255)
tGCCACCAAAACGGTATTCAAACATCGCGGAGGCGACGCTCGGTTCCGTTATCAGCTGGTTGAGGCAGTTGCGCATATCGCCCCAGGCAATGCCGCCTTCTGAACGGCGAATACGCCCCGTCGAGCCACCATTATCGGTGGTGGTGACg > 1:2499845/1‑149 (MQ=255)
tGCCACCAAAACGGTATTCAAACATCGCGGAGGCGACGCTCGGTTCCGTTATCAGCTGGTTGAGGCAGTTGCGCATATAGCCCCAGGCAATGCCGCCTTCTGAACGGCGAATACGCCCCGTCGAGCCACCATTATCGGTGGTGGTGACg > 1:2300594/1‑149 (MQ=255)
ccaccaAAACGGTATTCAAACATCGCGGAGGCGACGCTCGGTTCCGTTATCAGCTGGTTGAGGCAGTTGCGCATATCGCCCCAGGCAATGCCGCCTTCTGAACGGCGAATACGCCCCGTCGAGCCACCATTATCGGTGGTGGTGACGAt > 2:1888579/1‑149 (MQ=255)
ccaAAACGGTATTCAAACATCGCGGAGGCGACGCTCGGTTCCGTTATCAGCTGGTTGAGGCAGTTGCGCATATCGCCCCAGGCAATGCCGCCTTCTGAACGGCGAATACGCCCCGTCGAGCCACCATTATCGGTGGTGGTGACGATAcc < 1:4496556/149‑1 (MQ=255)
ccaAAACGGTATTCAAACATCGCGGAGGCGACGCTCGGTTCCGTTATCAGCTGGTTGAGGCAGTTGCGCATATCGCCCCAGGCAATGCCGCCTTCTGAACGGCGAATACGCCCCGTCGAGCCACCATTATCGGTGGTGGTGACGATAcc > 1:717458/1‑149 (MQ=255)
aaCGGTATTCAAACATCGCGGAGGCGACGCTCGGGTCCGTTATCAGCTGGTTGAGGCAGTTGCGCATATCGCCCCAGGCAATGCCGCCTTCTGAACGGCGAATACGCCCCGTCGAGCCACCATTATCGGTGGTGGTGACGATACCCGtt < 2:2428248/149‑1 (MQ=255)
ggTATTCAAACATCGCGGAGGCGACGCTCGGTTCCGTTATCAGCTGGTTGAGGCAGTTGCGCATATCGCCCCAGGCAATGCCGCCTTCTGAACGGCGAATACGCCCCGTCGAGCCACCATTATCGGTGGTGGTGACGATACCCGTTaaa > 1:2590175/1‑149 (MQ=255)
aTTCAAACATCGCGGAGGCGACGCTCGGTTCCGTTATCAGCTGGTTGAGGCAGTTGCGCATATCGCCCCAGGCAATGCCGCCTTCTGAACGGCGAATACGCCCCGTCGAGCCACCATTATCGGTGGTGGTGACGATACCCGTTAAACga < 2:4111548/149‑1 (MQ=255)
aTTCAAACATCGCGGAGGCGACGCTCGGTTCCGTTATCAGCTGGTTGAGGCAGTTGCGCATATAGCCCCAGGCAATGCCGCCTTCTGAACGGCGAATACGCCCCGTCGAGCCACCATTATCGGTGGTGGTGACGATACCCGTTAAACga > 1:4715844/1‑149 (MQ=255)
aaaCATCGCGGAGGCGACGCTCGGTTCCGTTATCAGCTGGTTGAGGCAGTTGCGCATATAGCCCCAGGCAATGCCGCCTTCTGAACGGCGAATACGCCCCGTCGAGCCACCATTATCGGTGGTGGTGACGATACCCGTTAAACGAGAAc > 2:3719119/1‑149 (MQ=255)
aaaCATCGCGGAGGCGACGCTCGGTTCCGTTATCAGCTGGTTGAGGCAGTTGCGCATATAGCCCCAGGCAATGCCGCCTTCTGAACGGCGAATACGCCCCGTCGAGCCACCATTATCGGTGGTGGTGACGATACCCGTTAAACGAGAAc > 2:3173990/1‑149 (MQ=255)
aTCGCGGAGGCGACGCTCGGTTCCGTTATCAGCTGGTTGAGGCAGTTGCGCATATCGCCCCAGGCAATGCCGCCTTCTGAACGGCGAATACGCCCCGTCGAGCCACCATTATCGGTGGTGGTGACGATACCCGTTAAACGAGAACCCaa > 1:3404260/1‑149 (MQ=255)
aTCGCGGAGGCGACGCTCGGTTCCGTTATCAGCTGGTTGAGGCAGTTGCGCATATCGCCCCAGGCAATGCCGCCTTCTGAACGGCGAATACGCCCCGTCGAGCCACCATTATCGGTGGTGGTGACGATACCCGTTAAACGAGAACCCaa < 1:936311/149‑1 (MQ=255)
tCGCGGAGGCGACGCTCGGTTCCGTTATCAGCTGGTTGAGGCAGTTGCGCATATCGCCCCAGGCAATGCCGCCTTCTGAACGGCGAATACGCCCCGTCGAGCCACCATTATCGGTGGTGGTGACGATACCCGTTAAACGAGAACCCaaa > 2:4556978/1‑149 (MQ=255)
tCGCGGAGGCGACGCTCGGTTCCGTTATCAGCTGGTTGAGGCAGTTGCGCATATCGCCCCAGGCAATGCCGCCTTCTGAACGGCGAATACGCCCCGTCGAGCCACCATTATCGGTGGTGGTGACGATACCCGTTAAACGAGAACCCaaa > 2:295657/1‑149 (MQ=255)
gcgGAGGCGACGCTCGGTTCCGTTATCAGCTGGTTGAGGCAGTTGCGCATATAGCCCCAGGCAATGCCGCCTTCTGAACGGCGAATACGCCCCGTCGAGCCACCATTATCGGTGGTGGTGACGATACCCGTTAAACGAGAACCCAAAGa < 2:1255863/149‑1 (MQ=255)
ggAGGCGACGCTCGGTTCCGTTATCAGCTGGTTGAGGCAGTTGCGCATATCGCCCCAGGCAATGCCGCCTTCTGAACGGCGAATACGCCCCGTCGAGCCACCATTATCGGTGGTGGTGACGATACCCGTTAAACGAGAACCCAAAGACg > 1:1070372/1‑149 (MQ=255)
aGGCGACGCTCGGTTCCGTTATCAGCTGGTTGAGGCAGTTGCGCATATCGCCCCAGGCAATGCCGCCTTCTGAACGGCGAATACGCCCCGTCGAGCCACCATTATCGGTGGTGGTGACGATACCCGTTAAACGAGAACCCAAAGACGaa < 1:1176484/149‑1 (MQ=255)
aCGCTCGGTTCCGTTATCAGCTGGTTGAGGCAGTTGCGCATATAGCCCCAGGCAATGCCGCCTTCTGAACGGCGAATACGCCCCGTCGAGCCACCATTATCGGTGGTGGTGACGATACCCGTTAAACGAGAACCCAAAGACGAAAGtga > 2:4584982/1‑149 (MQ=255)
cTCGGTTCCGTTATCAGCTGGTTGAGGCAGTTGCGCATATCGCCCCAGGCAATGCCGCCTTCTGAACGGCGAATACGCCCCGTCGAGCCACCATTATCGGTGGTGGTGACGATACCCGTTAAACGAGAACCCAAAGACGAAAGtgatga < 2:1357666/149‑1 (MQ=255)
cTCGGTTCCGTTATCAGCTGGTTGAGGCAGTTGCGCATATCGCCCCAGGCAATGCCGCCTTCTGAACGGCGAATACGCCCCGTCGAGCCACCATTATCGGTGGTGGTGACGATACCCGTTAAACGAGAACCCAAAGACGAAAGtgatga < 1:4206978/149‑1 (MQ=255)
cGGTTCCGTTATCAGCTGGTTGAGGCAGTTGCGCATATCGCCCCAGGCAATGCCGCCTTCTGAACGGCGAATACGCCCCGTCGAGCCACCATTATCGGTGGTGGTGACGATACCCGTTAAACGAGAACCCAAAGACGAAAGTGATgaga < 1:412220/149‑1 (MQ=255)
gTTCCGTTATCAGCTGGTTGAGGCAGTTGCGCATATCGCCCCAGGCAATGCCGCCTTCTGAACGGCGAATACGCCCCGTCGAGCCACCATTATCGGTGGTGGTGACGATACCCGTTAAACGAGAACCCAAAGACGAAAGTGATgagaga < 2:4393138/149‑1 (MQ=255)
gTTCCGTTATCAGCTGGTTGAGGCAGTTGCGCATATAGCCCCAGGCAATGCCGCCTTCTGAACGGCGAATACGCCCCGTCGAGCCACCATTATCGGTGGTGGTGACGATACCCGTTAAACGAGAACCCAAAGACGAAAGTGATgagaga > 1:1454445/1‑149 (MQ=255)
tCCGTTATCAGCTGGTTGAGGCAGTTGCGCATATCGCCCCAGGCAATGCCGCCTTCTGAACGGCGAATACGCCCCGTCGAGCCACCATTATCGGTGGTGGTGACGATACCCGTTAAACGAGAACCCAAAGACGAAAGTGATGAGAGAAc < 1:1089480/149‑1 (MQ=255)
ccGTTATCAGCTGGTTGAGGCAGTTGCGCATATAGCCCCAGGCAATGCCGCCTTCTGAACGGCGAATACGCCCCGTCGAGCCACCATTATCGGTGGTGGTGACGATACCCGTTAAACGAGAACCCAAAGACGAAAGTGATGAGAGAAcg < 2:2801867/149‑1 (MQ=255)
ccGTTATCAGCTGGTTGAGGCAGTTGCGCATATAGCCCCAGGCAATGCCGCCTTCTGAACGGCGAATACGCCCCGTCGAGCCACCATTATCGGTGGTGGTGACGATACCCGTTAAACGAGAACCCAAAGACGAAAGTGATGAGAGAAcg < 2:407464/149‑1 (MQ=255)
gTTATCAGCTGGTTGAGGCAGTTGCGCATATCGCCCCAGGCAATGCCGCCTTCTGAACGGCGAATACGCCCCGTCGAGCCACCATTATCGGTGGTGGTGACGATACCCGTTAAACGAGAACCCAAAGACGAAAGTGATGAGAGAAcgcg > 1:2788423/1‑149 (MQ=255)
gTTATCAGCTGGTTGAGGCAGTTGCGCATATAGCCCCAGGCAATGCCGCCTTCTGAACGGCGAATACGCCCCGTCGAGCCACCATTATCGGTGGTGGTGACGATACCCGTTAAACGAGAACCCAAAGACGAAAGTGATGAGAGAAcgcg > 1:2218591/1‑149 (MQ=255)
tATCAGCTGGTTGAGGCAGTTGCGCATATCGCCCCAGGCAATGCCGCCTTCTGAACGGCGAATACGCCCCGTCGAGCCACCATTATCGGTGGTGGTGACGATACCCGTTAAACGAGAACCCAAAGACGAAAGTGATGAGAGAACGCGTc > 1:886209/1‑149 (MQ=255)
aGCTGGTTGAGGCAGTTGCGCATATCGCCCCAGGCAATGCCGCCTTCTGAACGGCGAATACGCCCCGTCGAGCCACCATTATCGGTGGTGGTGACGATACCCGTTAAACGAGAACCCAAAGACGAAAGTGATGAGAGAACGCGTCCCAg > 1:3006578/1‑149 (MQ=255)
aGCTGGTTGAGGCAGTTGCGCATATAGCCCCAGGCAATGCCGCCTTCTGAACGGCGAATACGCCCCGTCGAGCCACCATTATCGGTGGTGGTGACGATACCCGTTAAACGAGAACCCAAAGACGAAAGTGATGAGAGAACGCGTCCCAg > 1:1335527/1‑149 (MQ=255)
cTGGTTGAGGCAGTTGCGCATATCGCCCCAGGCAATGCCGCCTTCTGAACGGCGAATACGCCCCGTCGAGCCACCATTATCGGTGGTGGTGACGATACCCGTTAAACGAGAACCCAAAGACGAAAGTGATGAGAGAACGCGTCCCAGTc < 1:3027252/149‑1 (MQ=255)
ggTTGAGGCAGTTGCGCATATCGCCCCAGGCAATGCCGCCTTCTGAACGGCGAATACGCCCCGTCGAGCCACCATTATCGGTGGTGGTGACGATACCCGTTAAACGAGAACCCAAAGACGAAAGTGATGAGAGAACGCGTCCCAGTCCa < 1:780106/149‑1 (MQ=255)
gTTGAGGCAGTTGCGCATATCGCCCCAGGCAATGCCGCCTTCTGAACGGCGAATACGCCCCGTCGAGCCACCATTATCGGTGGTGGTGACGATACCCGTTAAACGAGAACCCAAAGACGAAAGTGATGAGAGAACGCGTCCCAGTCCAt > 2:382345/1‑149 (MQ=255)
gTTGAGGCAGTTGCGCATATCGCCCCAGGCAATGCCGCCTTCTGAACGGCGAATACGCCCCGTCGAGCCACCATTATCGGTGGTGGTGACGATACCCGTTAAACGAGAACCCAAAGACGAAAGTGATGAGAGAACGCGTCCCAGTCCAt > 1:821342/1‑149 (MQ=255)
gTTGAGGCAGTTGCGCATATAGCCCCAGGCAATGCCGCCTTCTGAACGGCGAATACGCCCCGTCGAGCCACCATTATCGGTGGTGGTGACGATACCCGTTAAACGAGAACCCAAAGACGAAAGTGATGAGAGAACGCGTCCCAGTCCAt > 1:4404595/1‑149 (MQ=255)
gCAGTTGCGCATATCGCCCCAGGCAATGCCGCCTTCTGAACGGCGAATACGCCCCGTCGAGCCACCATTATCGGTGGTGGTGACGATACCCGTTAAACGAGAACCCAAAGACGAAAGTGATGAGAGAACGCGTCCCAGTCCATGCCCTc > 1:2749275/1‑149 (MQ=255)
gCAGTTGCGCATATCGCCCCAGGCAATGCCGCCTTCTGAACGGCGAATACGCCCCGTCGAGCCACCATTATCGGTGGTGGTGACGATACCCGTTAAACGAGAACCCAAAGACGAAAGTGATGAGAGAACGCGTCCCAGTCCATGCCCTc > 1:3631037/1‑149 (MQ=255)
gTTGCGCATATCGCCCCAGGCAATGCCGCCTTCTGAACGGCGAATACGCCCCGTCGAGCCACCATTATCGGTGGTGGTGACGATACCCGTTAAACGAGAACCCAAAGACGAAAGTGATGAGAGAACGCGTCCCAGTCCATGCCCTccgc > 1:3306863/1‑149 (MQ=255)
tGCGCATATCGCCCCAGGCAATGCCGCCTTCTGAACGGCGAATACGCCCCGTCGAGCCACCATTATCGGTGGTGGTGACGATACCCGTTAAACGAGAACCCAAAGACGAAAGTGATGAGAGAACGCGTCCCAGTCCATGCCCTccgccg < 1:2775858/149‑1 (MQ=255)
gcATATCGCCCCAGGCAATGCCGCCTTCTGAACGGCGAATACGCCCCGTCGAGCCACCATTATCGGTGGTGGTGACGATACCCGTTAAACGAGAACCCAAAGACGAAAGTGATGAGAGAACGCGTCCCAGTCCATGCCCTCCGCCgaga < 1:176500/149‑1 (MQ=255)
gcATATAGCCCCAGGCAATGCCGCCTTCTGAACGGCGAATACGCCCCGTCGAGCCACCATTATCGGTGGTGGTGACGATACCCGTTAAACGAGAACCCAAAGACGAAAGTGATGAGAGAACGCGTCCCAGTCCATGCCCTCCGCCgaga > 1:2056757/1‑149 (MQ=255)
atCGCCCCAGGCAATGCCGCCTTCTGAACGGCGAATACGCCCCGTCGAGCCACCATTATCGGTGGTGGTGACGATACCCGTTAAACGAGAACCCAAAGACGAAAGTGATGAGAGAACGCGTCCCAGTCCATGCCCTCCGCCGAGAGCaa > 1:1985523/1‑149 (MQ=255)
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GCCGCACGCTAAGGTGATCCAGCGCCTTTAACATCAAGTTTCCGAGATTATGACCGGAAAGTTCGCCATTGCCACCAAAACGGTATTCAAACATCGCGGAGGCGACGCTCGGTTCCGTTATCAGCTGGTTGAGGCAGTTGCGCATATCGCCCCAGGCAATGCCGCCTTCTGAACGGCGAATACGCCCCGTCGAGCCACCATTATCGGTGGTGGTGACGATACCCGTTAAACGAGAACCCAAAGACGAAAGTGATGAGAGAACGCGTCCCAGTCCATGCCCTCCGCCGAGAGCAAC > CP009273/811773‑812067
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
