Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F60 I0 R1
|
465 |
320.4 |
10502068 |
95.5% |
10029474 |
149.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
freq |
annotation |
gene |
description |
| RA |
CP009273 |
707,409 |
C→A |
8.1% |
intergenic (‑55/+85) |
ybfE ← / ← ybfF |
LexA‑regulated protein, CopB family/acyl‑CoA esterase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | CP009273 | 707,409 | 0 | C | A | 8.1%
| 1114.5
/ 48.9
| 298 | intergenic (‑55/+85) | ybfE/ybfF | LexA‑regulated protein, CopB family/acyl‑CoA esterase |
| Reads supporting (aligned to +/- strand): ref base C (135/137); new base A (12/13); total (147/151) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 306 total aligned reads displayed.
CATCGCGCGAAAGCGGATTAGTTTTCGGTCGTCCCGGTCGACGCTCGTGCGCGAACAGATCTAATGTCGTACGGTCCGTTTGTTCTTTGGCCATGATCTTGGTGACTTCGGGGGAAACAATCAGCCAGGCCTCTGCCCGGATGGATAGCGCGCCATAATACATCAGCGCGATGAGTCACGCCAACGCCCACGCGCGGAAAGCGACGCGGACGCTGGGTTTTTAATCAGTTGCGTTAATCATTGAGATAGCGACGGATAGCGCGTAATACCGCATCCGGTTTTTCAGCATGGACCCAG > CP009273/707261‑707557
|
cATCGCGCGAAAGCGGATTAGTTTTCGGTCGTCCCGGTCGACGCTCGTGCGCGAACAGATCTAATGTCGTACGGTCCGTTTGTTCTTTGGCCATGATCTTGGTGACTTCGGGGGAAACAATCAGCCAGGCCTCTGCCCGGATGGATAgc > 2:1989122/1‑149 (MQ=255)
tCGCGCGAAAGCGGATTAGTTTTCGGTCGTCCCGGTCGACGCTCGTGCGCGAACAGATCTAATGTCGTACGGTCCGTTTGTTCTTTGGCCATGATCTTGGTGACTTCGGGGGAAACAATCAGCCAGGCCTCTGCCCGGATGGATAgcgc < 2:2548890/149‑1 (MQ=255)
gcgcgAAAGCGGATTAGTTTTCGGTCGTCCCGGTCGACGCTCGTGCGCGAACAGATCTAATGTCGTACGGTCCGTTTGTTCTTTGGCCATGATCTTGGTGACTTCGGGGGAAACAATCAGCCAGGCCTCTGCCTGGATGGATAgcgcgc < 1:661834/149‑1 (MQ=255)
gcgcgAAAGCGGATTAGTTTTCGGTCGTCCCGGTCGACGCTCGTGCGCGAACAGATCTAATGTCGTACGGTCCGTTTGTTCTTTGGCCATGATCTTGGTGACTTCGGGGGAAACAATCAGCCAGGCCTCTGCCCGGATGGATAgcgcgc > 2:2977434/1‑149 (MQ=255)
cgAAAGCGGATTAGTTTTCGGTCGTCCCGGTCGACGCTCGTGCGCGAACAGATCTAATGTCGTACGGTCCGTTTGTTCTTTGGCCATGATCTTGGTGACTTCGGGGGAAACAATCAGCCAGGCCTCTGCCCGGATGGATAGCGCGCCat < 2:1031112/149‑1 (MQ=255)
gAAAGCGGATTAGTTTTCGGTCGTCCCGGTCGACGCTCGTGCGCGAACAGATCTAATGTCGTACGGTCCGTTTGTTCTTTTGCCATGATCTTGGTGACTTCGGGGGAAACAATCAGCCACGCCTCAGCCCGGATGGATATCGCGCCata > 1:755/1‑149 (MQ=255)
gAAAGCGGATTAGTTTTCGGTCGTCCCGGACGACGCTCGTGCGCGAACAGATCTAATGTCGTACGGTCCGTTTGTTCGTTGGCCATGATCTTGGTGACTTCGGGGGAAACAATCAGCCAGGCCTCTGCCCGGATGGATAGCGCGCCata > 1:2630224/1‑149 (MQ=255)
aaaGCGGATTAGTTTTCGGTCGTCCCGGTCGACGCTCGTGCGCGAACAGATCTAATGTCGTACGGTCCGTTTGTTCTTTGGCCATGATCTTGGTGACTTCGGGGGAAACAATCAGCCAGGCCTCTGCCCGGATGGATAGCGCGCCataa > 2:2111123/1‑149 (MQ=255)
aGCGGATTAGTTTTCGGTCGTCCCGGTCGACGCTCGTGCGCGAACAGATCTAATGTCGTACGGTCCGTTTGTTCTTTGGCCATGATCTTGGTGACTTCGGGGGAAACAATCAGCCAGGCCTCTGCCCGGATGGATAGCGCGCCataata > 2:2767746/1‑149 (MQ=255)
aGCGGATTAGTTGTCGGTCGTCCCGGTCGACGCTCGTGCGCGAACAGATCTAATGTCGTACGGTCCGTTTGTTCTTTGGCCATGATCTTGGTGACTTCGGGGGAAACAATCAGCCAGGCCTCTGCCCGGATGGATAGAGCGCCataata < 1:4681370/149‑1 (MQ=255)
gCGGATTAGTTTTCGGTCGTCCCGGTCGACGCTCGTGCGCGAACAGATCTACTGTCGTACGGTCCGTTTGTTCTTTGGCCATGATCTTGGTGACTTCGGGGGAAACAATCAGCCAGGCCTCTGCCCGGATGGATAGCGCGCCATAATAc < 2:5173449/149‑1 (MQ=255)
cGGATTAGTTTTCGGTCGTCCCGGTCGACGCTCGTGCGCGAACAGATCTAATGTCGTACGGTCCGTTTGTTCTTTGGCCATGATCTTGGTGACTTCGGGGGAAACAATCAGCCAGGCCTCTGCCCGGATGGATAGCGCGCCATAATACa < 1:1114747/149‑1 (MQ=255)
cGGATTAGTTTTCGGTCGTCCCGGTCGACGCTCGTGCGCGAACAGATCTAATGTCGTACGGTCCGTTTGTTCTTTGGCCATGATCTTGGTGACTTCGGGGGAAACAATCAGCCAGGCCTCTGCCCGGATGGATAGCGCGCCATAATACa < 1:4001277/149‑1 (MQ=255)
gATTAGTTTTCGGTCGTCCCGGTCGACGCTCGTGCGCGAACAGATCTAATGTCGTACGGTCCGTTTGTTCTTTGGCCATGATCTTGGTGACTTCGGGGGAAACAATCAGCCAGGCCTCTGCCCGGATGGATAGCGCGCCATAATACATc < 2:2417925/149‑1 (MQ=255)
aTTAGTTTTCGGTCGTCCCGGTCGACGCTCGTGCGCGAACAGATCTAATGTCGTACGGTCCGTTTGTTCTTTGGCCATGATCTTGGTGACTTCGGGGGAAACAATCAGCCAGGCCTCTGCCCGGATGGATAGCGCGCCATAATACATCa < 2:1503733/149‑1 (MQ=255)
aTTAGTTTTCGGTCGTCCCGGTCGACGCTCGTGCGCGAACAGATCTAATGTCGTACGGTCCGTTTGTTCTTTGGCCATGATCTTGGTGACTTCGGGGGAAACAATCAGCCAGGCCTCTGCCCGGATGGATAGCGCGCCATAATACATCa < 1:3878047/149‑1 (MQ=255)
aTTAGTTTTCGGTCGTCCCGGTCGACGCTCGTGCGCGAACAGATCTAATGTCGTACGGTCAGTTTGTTCTTTGGCCATGATCTTGGTGACTTCGGGGGAAACAATCAGCCAGGCCTCTGCCCGGATGGATAGCGCGCCATAATACATCa < 2:330662/149‑1 (MQ=255)
ttAGTTTTCGGTCGTCCCGGTCGACGCTCGTGCGCGAACAGATCTAATGTCGTACGGTCCGTTTGTTCTTTGGCCATGATCTTGGTGACTTCGGGGGAAACAATCAGCCAGGCCTCTGCCCGGATGGATAGCGCGCCATAATACATCAg > 2:1219226/1‑149 (MQ=255)
ttAGTTTTCGGTCGTCCCGGTCGACGCTCGTGCGCGAACAGATCTAATGTCGTACGGTCCGTTTGTTCTTTGGCCATGATCTTGGTGACTTCGGGGGAAACAATCAGCCAGGCCTCTGCCCGGATGGATAGCGCGCCATAATACATCAg > 1:303744/1‑149 (MQ=255)
gTTTTCGGTCGTCCCGGTCGACGCTCGTGCGCGAACAGATCTAATGTCGTACGGTCCGTTTGTTCTTTGGCCATGATCTTGGTGACTTCGGGGGAAACAATCAGCCAGGCCTCTGCCCGGATGGATAGCGCGCCATAATACATCAgcgc > 1:407591/1‑149 (MQ=255)
ttCGGTCGTCCCGGTCGACGCTCGTGCGCGAACAGATCTAATGTCGTACGGTCCGTTTGTTCTTTGGCCATGATCTTGGTGACTTCGGGGGAAACAATCAGCCAGGCCTCTGCCCGGATGGATAGCGCGCCATAATACATCAGCGCGAt < 2:4111432/149‑1 (MQ=255)
ttCGGTCGTCCCGGTCGACGCTCGTGCGCGAACAGATCTAATGTCGTACGGTCCGTTTGTTCTTTGGCCATGATCTTGGTGACTTCGGGGGAAACAATCAGCCAGGCCTCTGCCCGGATGGATAGCGCGCCATAATACATCAGCGCGAt < 1:4495588/149‑1 (MQ=255)
gtcgtcCCGGTCGACGCTCGTGCGCGAACAGATCTAATGTCGTACGGTCCGTTTGTTCTTTGGCCATGATCTTGGTGACTTCGGGGGAAACAATCAGCCAGGCCTCTGCCCGGATGGATAGCGCGCCATACTACATCAGCGCGATGAGt > 2:4290683/1‑149 (MQ=255)
gtcgtcCCGGTCGACGCTCGTGCGCGAACAGATCTAATGTCGTACGGTCCGTTTGTTCTTTGGCCATGATCTTGGTGACTTCGGGGGAAACAATCAGCCAGGCCTCTGCCCGGATGGATAGCGCGCCATAATACATCAGCGCGATGAGt > 2:1673440/1‑149 (MQ=255)
tcCCGGTCGACGCTCGTGCGCGAACAGATCTAATGTCGTACGGTCCGTTTGTTCTTTGGCCATGATCTTGGTGACTTCGGGGGAAACAATCAGCCAGGCCTCTGCCCGGATGGATAGCGCGCCATAATACATCAGCGCGATGAGTCACg > 2:2427785/1‑149 (MQ=255)
tcCCGGTCGACGCTCGTGCGCGAACAGATCTAATGTCGTACGGTCCGTTTGTTCTTTGGCCATGATCTTGGTGACTTCGGGGGAAACAATCAGCCAGGCCTCTGCCCGGATGGATAGAGCGCCATAATACATCAGCGCGATGAGTCACg > 2:4767650/1‑149 (MQ=255)
ggTCGACGCTCGTGCGCGAACAGATCTAATGTCGTACGGTCCGTTTGTTCTTTGGCCATGATCTTGGTGACTTCGGGGGAAACAATCAGCCAGGCCTCTGCCCGGATGGATAGCGCGCCATAATACATCAGCGCGATGAGTCACGCCaa < 2:2330807/149‑1 (MQ=255)
ggTCGACGCTCGTGCGCGAACAGATCTAATGTCGTACGGTCCGTTTGTTCTTTGGCCATGATCTTGGTGACTTCGGGGGAAACAATCAGCCAGGCCTCTGCCCGGATGGATAGCGCGCCATAATACATCAGCGCGATGAGTCACGCCaa < 1:1577452/149‑1 (MQ=255)
ggTCGACGCTCGTGCGCGAACAGATCTAATGTCGTACGGTCCGTTTGTTCTTTGGCCATGATCTTGGTGACTTCGGGGGAAACAATCAGCCAGGCCTCTGCCCGGATGGATAGCGCGCCATAATACATCAGCGCGATGAGTCACGCCaa > 1:3894553/1‑149 (MQ=255)
tCGTGCGCGAACAGATCTAATGTCGTACGGTCCGTTTGTTCTTTGGCCATGATCTTGGTGACTTCGGGGGAAACAATCAGCCAGGCCTCTGCCCGGATGGATAGCGCGCCATAATACATCAGCGCGATGAGTCACGCCAACGCCCAcgc > 1:3763823/1‑149 (MQ=255)
tGCGCGAACAGATCTAATGTCGTACGGTCCGTTTGTTCTTTGGCCATGATCTTGGTGACTTCGGGGGAAACAATCAGCCAGGCCTCTGCCCGGATGGATAGCGCGCCATAATACATCAGCGCGATGAGTCACGCCAACGCCCAcgcgcg > 1:3940186/1‑149 (MQ=255)
tGCGCGAACAGATCTAATGTCGTACGGTCCGTTTGTTCTTTGGCCATGATCTTGGTGACTTCGGGGGAAACAATCAGCCAGGCCTCTGCCCGGATGGATAGCGCGCCATAATACATCAGCGCGATGAGTCACGCCAACGCCCAcgcgcg > 1:2830025/1‑149 (MQ=255)
cgcgAACAGATCTAATGTCGTACGGTCCGTTTGTTCTTTGGCCATGATCTTGGTGACTTCGGGGGAAACAATCAGCCAGGCCTCTGCCCGGATGGATAGCGCGCCATAATACATCAGCGCGATGAGTCACGCCAACGCCCACGCGCGGa < 1:1621463/149‑1 (MQ=255)
cgAACAGATCTAATGTCGTACGGTCCGTTTGTTCTTTGGCCATGATCTTGGTGACTTCGGGGGAAACAATCAGCCAGGCCTCTGCCCGGATGGATAGCGCGCCATAATACATCAGCGCGATGAGTCACGCCAACGCCCACGCGCGGaaa < 2:134959/149‑1 (MQ=255)
gAACAGATCTAATGTCGTACGGTCCGTTTGTTCTTTGGCCATGATCTTGGTGACTTCGGGGGAAACAATCAGCCAGGCCTCTGCCCGGATGGATAGCGCGCCATAATACATCAGCGCGATGAGTCACGCCAACGCCCACGCGCGGAAAg > 2:4509375/1‑149 (MQ=255)
gAACAGATCTAATGTCGTACGGTCCGTTTGTTCTTTGGCCATGATCTTGGTGACTTCGGGGGAAACAATCAGCCAGGCCTCTGCCCGGATGGATAGCGCGCCATAATACATCAGCGCGATGAGTCACGCCAACGCCCACGCGCGGAAAg < 2:2713375/149‑1 (MQ=255)
aaCAGATCTAATGTCGTACGGTCCGTTTGTTCTTTGGCCATGATCTTGGTGACTTCGGGGGAAACAATCAGCCAGGCCTCTGCCCGGATGGATAGCGCGCCATAATACATCAGCGCGATGAGTCACGCCAACGCCCACGCGCGGAAAGc > 1:2974892/1‑149 (MQ=255)
aaCAGATCTAATGTCGTACGGTCCGTTTGTTCTTTGGCCATGATCTTGGTGACTTCGGGGGAAACAATCAGCCAGGCCTCTGCCCGGATGGATAGCGCGCCATAATACATCAGCGCGATGAGTCACGCCAACGCCCACGCGCGGAAAGc > 1:3501089/1‑149 (MQ=255)
aGATCTAATGTCGTACGGTCCGTTTTTTCTTTGGCCATGATATTTGTGACTTCGGGGGAACCAAAAAGCCAGGCCTCTGCCCGGATGGATAGAGCGCCATAATACATAAGCGCGATGAGTAAAGCCAAACCCCACCCGCGGAAAGCGAc > 1:3577548/1‑149 (MQ=255)
aGATCTAATGTCGTACGGTCCGTTTGTTCTTGGGCCATGATCTTGGTGACTTCGGGGGAAACAATCAGCCAGGCCTCTGCCCGGATGGATAGCGCGCCATAATACATCAGCGCGATGAGTCACGCCAACGCCCCCGCGCGGAAAGCGAc < 2:5037406/149‑1 (MQ=255)
tAATGTCGTACGGTCCGTTTGTTCTTTGGCCATGATCTTGGTGACTTCGGGGTAAACAATCAGCCAGGCCTCTGCCCGGATGGATAGCGCGCCATAATACATCAGCGCGATGAGTCACGCCAACGCCCACGCGCGGAAAGCGACGCGGa < 1:92097/149‑1 (MQ=255)
tAATGTCGTACGGTCCGTTTGTTCTTTGGCCATGATCTTGGTGACTTCGGGGGAAACAATCAGCCAGGCCTCTGCCCGGATGGATAGCGCGCCATAATACATCAGCGCGATGAGTCACGCCAACGCCCACGCGCGGAAAGCGACGCGGa < 1:2175923/149‑1 (MQ=255)
tCGTACGGTCCGTTTGTTCTTTGGCCATGATCTTGGTGACTTCGGGGGAAACAATCAGCCAGGCCTCTGCCCGGATGGATAGCGCGCCATAATACATCAGCGCGATGAGTCACGCCAACGCCCACGCGCGGAAAGCGACGCGGACGCTg < 1:4753566/149‑1 (MQ=255)
tACGGTCCGTTTGTTCTTTGGCCATGATCTTGGTGACTTCGGGGGAAACAATCAGCCAGGCCTCTGCCCGGATGGATAGCGCGCCATAATACATCAGCGCGATGAGTCACGCCAACGCCCACGCGCGGAAAGCGACGCGGACGCTGGGt < 1:5066304/149‑1 (MQ=255)
ggTCCGTTTGTTCTTTGGCCATTATCTTGGTGACTTCGGGGGAAACAATCAGCCAGGCCTCTGCCCGGATGGATAGCGCGCCATAATACATCAGCGCGATGAGTCACGCCAACGCCCACGCGCGGAAAGCGACGCGGACGCTGGGtttt > 1:5215231/1‑149 (MQ=255)
gTCCGTTTGTTCTTTGGCCATGCTCTTGGTGACTTCGGGGGAAACAATCAGCCAGGCCTCTGCCCGGATGGATAGCGCGCCATAATACATCAGCGCGATGAGTCACGCCAACGCCCACGCGCGGAAAGCGACGCGGACGCTGGGttttt < 2:1313657/149‑1 (MQ=255)
gTCCGTTTGTTCTTTGGCCATGATCTTGGTGACTTCGGGGGAAACAATCAGCCAGGCCTCTGCCCGGATGGATAGCGCGCCATAATACATCAGCGCGATGAGTCACGCCAACGCCCACGCGCGGAAAGCGACGCGGACGCTGGGttttt > 1:2558987/1‑149 (MQ=255)
gTCCGTTTGTTCTTTGGCCATGATCTTGGTGACTTCGGGGGAAACAATCAGCCAGGCCTCTGCCCGGATGGATAGCGCGCCATAATACATCAGCGCGATGAGTCACGCCAACGCCCACGCGCGGAAAGCGACGCGGACGCTGGGttttt > 2:2971477/1‑149 (MQ=255)
tCCGTTTGTTCTTTGGCCATGATCTTGGTGACTTCGGGGGAAACAATCAGCCAGGCCTCTGCCCGGATGGATAGCGCGCCATAATACATCAGCGCGATGAGTCACGCCAACGCCCACGCGCGGAAAGCGACGCGGACGCTGGGTTTTTa < 2:291291/149‑1 (MQ=255)
ccGTTTGTTCTTTGGCCATGATCTTGGTGACTTCGGGGGAAACAATCAGCCAGGCCTCTGCCCGGATGGATAGCGCGCCATAATACATCAGCGCGATGAGTCACGCCAACGCCCACGCGCGGAAAGCGACGCGGACGCTGGGTTTTTaa > 1:2433293/1‑149 (MQ=255)
cGTTTGTTCTTTGGCCATGATCTTGGTGACTTCGGGGGAAACAATCAGCCAGGCCTCTGCCCGGATGGATAGCGCGCCATAATACATCAGCGCGATGAGTCACGCCAACGCCCACGCGCGGAAAGCGACGCGGACGCTGGGTTTTTAAt < 2:3520379/149‑1 (MQ=255)
gTTCTTTGGCCATGATCTTGGTGACTTCGGGGGAAACAATCAGCCAGGCCTCTGCCCGGATGGATAGCGCGCCATAATACATCAGCGCGATGAGTCACGCCAACGCCCACGCGCGGAAAGCGACGCGGACGCTGGGTTTTTAATCAGtt > 1:3205780/1‑149 (MQ=255)
ttCTTTGGCCATGATCTTGGTGACTTCGGGGGAAACAATCAGCCAGGCCTCTGCCCGGATGGATAGCGCGCCATAATACATCAGCGCGATGAGTCACGCCAACGCCCACGCGCGGAAAGCGACGCGGACGCTGGGTTTTTAATCAGTTg > 2:662448/1‑149 (MQ=255)
tttGGCCATGATCTTGGTGACTTCGGGGGAAACAATCAGCCAGGCCTCTGCCCGGATGGATAGCGCGCCATAATACATCAGCGCGATGAGTCACGCCAACGCCCACGCGCGGAAAGCGACGCGGACGCTGGGTTTTTAATCAGTTGCGt > 1:1001290/1‑149 (MQ=255)
tttGGCCATGATCTTGGTGACTTCGGGGGAAACAATCAGCCAGGCCTCTGCCCGGATGGATAGAGCGCCATAATACATCAGCGCGATGAGTCACGCCAACGCCCACGCGCGGAAAGCGACGCGGACGCTGGGTTTTTAATCAGTTGCGt > 2:3556516/1‑149 (MQ=255)
ggCCATGATCTTGGTGACTTCGGGGGAAACAATCAGCCAGGCCTCTGCCCGGATGGATAGCGCGCCATAATACATCAGCGCGATGAGTCACGCCAACGCCCACGCGCGGAACGCGACGCGGACGCTGGGTTTTTAATCAGTTGCGTTaa > 2:4989249/1‑149 (MQ=255)
gCCATGATCTTGGTGACTTCGGGGGAAACAATCAGCCAGGCCTCTGCCCGGATGGATAGCGCGCCATAATACATCAGCGCGATGAGTCACGCCAACGCCCACGCGCGGAAAGCGACGCGGACGCTGGGTTTTTAATCAGTTGCGTTAAt < 2:1113503/149‑1 (MQ=255)
aTCTTGGTGACTTCGGGGGAAACAATCAGCCAGGCCTCTGCCCGGATGGATAGCGCGCCATAATACATCAGCGCGATGAGTCACGCCAACGCCCACGCGCGGAAAGCGACGCGGACGCTGGGTTTTTAATCAGTTGCGTTAATCATTga < 2:2049763/149‑1 (MQ=255)
tCTTGGTGACTTCGGGGGAAACAATCAGCCAGGCCTCTGCCCGGATGGATAGCGCGCCATAATACATCAGCGCGATGAGTCACGCCAACGCCCACGCGCGGAAAGCGACGCGGACGCTGGGTTTTTAATCAGTTGCGTTAATCATTgag < 1:2125565/149‑1 (MQ=255)
tCTTGGTGACTTCGGGGGAAACAATCAGCCAGGCCTCTGCCCGGATGGATAGCGCGCCATAATACATCAGCGCGATGAGTCACGCCAACGCCCACGCGCGGAAAGCGACGCGGACGCTGGGTTTTTAATCAGTTGCGTTAATCATTgag > 1:1305822/1‑149 (MQ=255)
ctgggTGACTTCGGGGGAAACAATCAGCCAGGCCTCTGCCCGGATGGATAGCGCGCCATAATACATCAGCGCGATGAGTCACGCCAACGCCCACGCGCGGAAAGCGACGCGGACGCTGGGTTTTTAATCAGTTGCGTTAATCATTgaga < 1:231427/146‑1 (MQ=255)
cTTGGTGACTTCGGGGGAAACAATCAGCCAGGCCTCTGCCCGGATGGATAGCGCGCCATAATACATCAGCGCGATGAGTCACGCCAACGCCCACGCGCGGAAAGCGACGCGGACGCTGGGTTTTTAATCAGTTGCGTTAATCATTgaga < 1:2857260/149‑1 (MQ=255)
cTTGGTGACTTCGGGGGAAACAATCAGCCAGGCCTCTGCCCGGATGGATAGCGCGCCATAATACATCAGCGCGATGAGTCACGCCAACGCCCACGCGCGGAAAGCGACGCGGACGCTGGGTTTTTAATCAGTTGCGTTAATCATTgaga < 1:4598424/149‑1 (MQ=255)
ggTGACTTCGGGGGAAACAATCAGCCAGGCCTCTGCCCGGATGGATAGCGCGCCATAATACATCAGCGCGATGAGTCACGCCAACGCCCACGCGCGGAAAGCGACGCGGACGCTGGGTTTTTAATCAGTTGCGTTAATCATTGAGATAg < 2:1606271/149‑1 (MQ=255)
ggTGACTTCGGGGGAAACAATCAGCCAGGCCTCTGCCCGGATGGATAGCGCGCCATAATACATCAGCGCGATGAGTCACGCCAACGCCCACGCGCGGAAAGCGACGCGGACGCTGGGTTTTTAATCAGTTGCGTTAATCATTGAGATAg > 1:1393370/1‑149 (MQ=255)
gTGACTTCGGGGGAAACAATCAGCCAGGCCTCTGCCCGGATGGATAGCGCGCCATAATACATCAGCGCGATGAGTCACGCCAACGCCCACGCGCGGAAAGCGACGCGGACGCTGGGTTTTTAATCAGTTGCGTTAATCATTGAGATAGc < 2:2630224/149‑1 (MQ=255)
gTGACTTCGGGGGAAACAATCAGCCAGGCCTCTGCCCGGATGGATAGCGCGCCATAATACATCAGCGCGATGAGTCACGCCAACGCCCACGCGCGGAAAGCGACGCGGACGCTGGGTTTTTAATCAGTTGCGTTAATCATTGAGATAGc < 2:567633/149‑1 (MQ=255)
ttCGGGGGAAACAATCAGCCAGGCCTCTGCCCGGATGGATAGCGCGCCATAATACATCAGCGCGATGAGTCACGCCAACGCCCACGCGCGGAAAGCGACGCGGACGCTGGGTTTTTAATCAGTTGCGTTAATCATTGAGATAGCGACgg > 1:2362397/1‑149 (MQ=255)
ttCGGGGGAAACAATCAGCCAGGCCTCTGCCCGGATGGATAGCGCGCCATAATACATCAGCGCGATGAGTCACGCCAACGCCCACGCGCGGAAAGCGACGCGGACGCTGGGTTTTTAATCAGTTGCGTTAATCATTGAGATAGCGACgg > 2:1758273/1‑149 (MQ=255)
cGGGGGAAACAATCAGCCAGGCCTCTGCCCGGATGGATAGCGCGCCATAATACATCAGCGCGATGAGTCACGCCAACGCCCACGCGCGGAAAGCGACGCGGACGCTGGGTTTTTAATCAGTTGCGTTAATCATTGAGATAGCGACGGAt < 1:4320691/149‑1 (MQ=255)
ggggAAACAATCAGCCAGGCCTCTGCCCGGATGGATAGCGCGCCATAATACATCAGCGCGATGAGTCACGCCAACGCCCACGCGCGGAAAGCGACGCGGACGCTGGGTTTTTAATCAGTTGCGTTAATCATTGAGATAGCGACGGATAg < 2:4621903/149‑1 (MQ=255)
ggAAACAATCAGCCAGGCCTCTGCCCGGATGGATAGCGCGCCATAATACATCAGCGCGATGAGTCACGCCAACGCCCACGCGCGGAAAGCGACGCGGACGCTGGGTTTTTAATCAGTTGCGTTAATCATTGAGATAGCGACGGATAgcg > 2:3627864/1‑149 (MQ=255)
aaaCAATCAGCCAGGCCTCTGCCCGGATGGATAGCGCGCCATAATACATCAGCGCGATGAGTCACGCCAACGCCCACGCGCGGAAAGCGACGCGGACGCTGGGTTTTTAATCAGTTGCGTTAATCATTGAGATAGCGACGGATAGcgcg > 2:3771053/1‑149 (MQ=255)
aCAATCAGCCAGGCCTCTGCCCGGATGGATAGCGCGCCATAATACATCAGCGCGATGAGTCACGCCAACGCCCACGCGCGGAAAGCGACGCGGACGCTGGGTTTTTAATCAGTTGCGTTAATCATTGAGATAGCGACGGATAGCGCGTa < 2:3416535/149‑1 (MQ=255)
aTCAGCCAGGCCTCTGCCCGGATGGATAGCGCGCCATAATACATCAGCGCGATGAGTCACGCCAACGCCCACGCGCGGAAAGCGACGCGGACGCTGGGTTTTTAATCAGTTGCGTTAATCATTGAGATAGCGACGGATAGCGCGTAATa > 2:628585/1‑149 (MQ=255)
tCAGCCAGGCCTCTGCCCGGATGGATAGCGCGCCATAATACATCAGCGCGATGAGTCACGCCAACGCCCACGCGCGGAAAGCGACGCGGACGCTGGGTTTTTAATCAGTTGCGTTAATCATTGAGATAGCGACGGATAGCGCGTAATAc < 1:1989122/149‑1 (MQ=255)
tCAGCCAGGCATCTGCCCGGATGGATAGCGCGCCATAATACATCAGCGCGATGAGTCACGCCAACGCCCACGCGCGGAAAGCGACGCGGACGCTGGGTTTTTAATCAGTTTCGTTAATCATAGAGATAGCGACGGATAGCGCGTAATAc > 1:4133942/1‑149 (MQ=255)
aGCCAGGCCTCTGCCCGGATGGATAGCGCGCCATAATACATCAGCGCGATGAGTCACGCCAACGCCCACGCGCGGAAAGCGACGCGGACGCTGGGTTTTTAATCAGTTGCGTTAATCATTGAGATAGCGACGGATAGCGCGTAATACCg < 2:2833958/149‑1 (MQ=255)
ccAGGCCTCTGCCCGGATGGATAGCGCGCCAGAATACATCAGCGCGATGAGTCACGCCAACGCCCACGCGCGGAAAGCGACGCGGACGCTGGGTTTTTAATCAGTTGCGTTAATCATTGAGATAGCGACGGATAGCGCGTAATACCGCa < 2:1865175/149‑1 (MQ=255)
ctggCCTCTGCCCGGATGTATAGCGCGCAATAATACATCAGCGCGTTGTGTCACGCCAACGCCCACGCGCGGAAAGCGACGCGGACGCTGGGTTTTTAATCAGTTGCGTTAATCATTGAGATAGCGACGGATAGCGCGTAATACCGCAt < 1:3102792/147‑1 (MQ=255)
cAGGCCTCTGCCCGGATGGATAGCGCGCCATAATACATCAGCGCGATGAGTCACGCCAACGCCCACGCGCGGAAAGCGACGCGGACGCTGGGTTTTTAATCAGTTGCGTTAATCATTGAGATAGCGACGGATAGCGCGTAATACCGCAt > 1:3673669/1‑149 (MQ=255)
aGGCCTCTGCCCGGATGGATAGCGCGCCATAATACATCAGCGCGATGAGTCACGCCAACGCCCACGCGCGGAAAGCGACGCGGACGCTGGGTTTTTAATCAGTTGCGTTAATCATTGAGATAGCGACGGATAGCGCGTAATACCGCATc < 2:2000252/149‑1 (MQ=255)
aGGCCTCTGCCCGGATGGATAGCGCGCCATAATACATCAGCGCGATGAGTCACGCCAACGCCCACGCGCGGAAAGCGACGCGGACGCTGGGTTTTTAATCAGTTGCGTTAATCATTGAGATAGCGACGGATAGCGCGTAATACCGCATc > 1:4214850/1‑149 (MQ=255)
ccTCTGCCCGGATGGATAGCGCGCCATAATACATCAGCGCGATGAGTCACGCCAACGCCCACGCGCGGAAAGCGACGCGGACGCTGGGTTTTTAATCAGTTGCGTTAATCATTGAGATAGCGACGGATAGCGCGTAATACCGCATCCgg > 1:4187747/1‑149 (MQ=255)
ctctGCCCGGATGGATAGCGCGCCATAATACATCAGCGCGATGAGTCACGCCAACGCCCACGCGCGGAAAGCGACGCGGACGCTGGGTTTTTAATCAGTTGCGTTAATCATTGAGATAGCGACGGATAGCGCGTAATACCGCATCCGGt > 2:4654335/1‑149 (MQ=255)
tctGCCCGGATGGATAGCGCGCCATAATACATCAGCGCGATGAGTCACGCCAACGCCCACGCGCGGAAAGCGACGCGGACGCTGGGTTTTTAATCAGTTGCGTTAATCATTGAGATAGCGACGGATAGCGCGTAATACCGCATCCGGtt > 1:3447058/1‑149 (MQ=255)
tctGCCCGGATGGATAGCGCGCCATAATACATCAGCGCGATGAGTCACGCCAACGCCCACGCGCGGAAAGCGACGCGGACGCTGGGTTTTTAATCAGTTGCGTTAATCATTGAGATAGCGACGGATAGCGCGTAATACCGCATCCGGtt < 2:4423627/149‑1 (MQ=255)
gCCCGGATGGATAGCGCGCCATAATACATCAGCGCGATGAGTCACGCCAACGCCCACGCGCGGAAAGCGACGCGGACGCTGGGTTTTTAATCAGTTGCGTTAATCATTGAGATAGCGACGGATAGCGCGTAATACCGCATCCGGttttt > 1:4908161/1‑149 (MQ=255)
ccGGATGGATAGCGCGCCATAATACATCAGCGCGATGAGTCACGCCAACGCCCACGCGCGGAAAGCGACGCGGACGCTGGGTTTTTAATCAGTTGCGTTAATCATTGAGATAGCGACGGATAGCGCGTAATACCGCATCCGGTTTTTCa < 2:3682147/149‑1 (MQ=255)
gatggatAGAGCGCCATAATACATCAGCGCGATGAGTCACGCCAACGCCCACGCGCGGAAAGCGACGCGGACGCTGGGTTTTTAATCAGTTGCGTTAATCATTGAGATAGCGACGGATAGCGCGTAATACCGCATCCGGTTTTTCAGCa < 2:3941977/149‑1 (MQ=255)
ggatAGAGCGCCATAATACATCAGCGCGATGAGTCACGCCAACGCCCACGCGCGGAAAGCGACGCGGACGCTGGGTTTTTAATCAGTTGCGTTAATCATTGAGATAGCGACGGATAGCGCGTAATACCGCATCCGGTTTTTCAGCATgg > 2:4532347/1‑149 (MQ=255)
ggatAGAGCGCCATAATACATCAGCGCGATGAGTCACGCCAACGCCCACGCGCGGAAAGCGACGCGGACGCTGGGTTTTTAATCAGTTGCGTTAATCATTGAGATAGCGACGGATAGCGCGTAATACCGCATCCGGTTTTTCAGCATgg > 2:1142443/1‑149 (MQ=255)
gatAGCGCGCCATAATACATCAGCGCGATGAGTCACGCCAACGCCCACGCGCGGAAAGCGACGCGGACGCTGGGTTTTTAATCAGTTGCGTTAATCATTGAGATAGCGACGGATAGCGCGTAATACCGCATCCGGTTTTTCAGCATGGa > 2:4261144/1‑149 (MQ=255)
gatAGCGCGCCATAATACATCAGCGCGATGAGTCACGCCAACGCCCACGCGCGGAAAGCGACGCGGACGCTGGGTTTTTAATCAGTTGCGTTAATCATTGAGATAGCGACGGATAGCGCGTAATACCGCATCCGGTTTTTCAGCATGGa > 2:731263/1‑149 (MQ=255)
gatAGCGCGCCATAATACATCAGCGCGATGAGTCACGCCAACGCCCACGCGCGGAAAGCGACGCGGACGCTGGGTTTTTAATCAGTTGCGTTAATCATTGAGATAGCGACGGATAGCGCGTAATACCGCATCCGGTTTTTCAGCATGGa < 2:5125997/149‑1 (MQ=255)
gatAGCGCGCCATAATACATCAGCGCGATGAGTCACGCCAACGCCCACGCGCGGAAAGCGACGCGGACGCTGGGTTTTTAATCAGTTGCGTTAATCATTGAGATAGCGACGGATAGCGCGTAATACCGCATCCGGTTTTTCAGCATGGa > 2:4363371/1‑149 (MQ=255)
gatAGCGCGCCATAATACATCAGCGCGATGAGTCACGCCAACGCCCACGCGCGGAAAGCGACGCGGACGCTGGGTTTTTAATCAGTTGCGTTAATCATTGAGATAGCGACGGATAGCGCGTAATACCGCATCCGGTTTTTCAGCATGGa < 2:3838652/149‑1 (MQ=255)
atAGCGCGCCATAATACATCAGCGCGATGAGTCACGCCAACGCCCACGCGCGGAAAGCGACGCGGACGCTGGGTTTTTAATCAGTTGCGTTAATCATTGAGATAGCGACGGATAGCGCGTAATACCGCATCCGGTTTTTCAGCATGGAc < 1:202746/149‑1 (MQ=255)
atAGCGCGCCATAATACATCAGCGCGATGAGTCACGCCAACGCCCACGCGCGGAAAGCGACGCGGACGCTGGGTTTTTAATCAGTTGCGTTAATCATTGAGATAGCGACGGATAGCGCGTAATACCGCATCCGGTTTTTCAGCATGGAc > 1:181857/1‑149 (MQ=255)
gcgcgcCATAATACATCAGCGCGATGAGTCACGCCAACGCCCACGCGCGGAAAGCGACGCGGACGCTGGGTTTTTAATCAGTTGCGTTAATCATTGAGATAGCGACGGATAGCGCGTAATACCGCATCCGGTTTTTCAGCATGGACCCa > 1:3240576/1‑149 (MQ=255)
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CATCGCGCGAAAGCGGATTAGTTTTCGGTCGTCCCGGTCGACGCTCGTGCGCGAACAGATCTAATGTCGTACGGTCCGTTTGTTCTTTGGCCATGATCTTGGTGACTTCGGGGGAAACAATCAGCCAGGCCTCTGCCCGGATGGATAGCGCGCCATAATACATCAGCGCGATGAGTCACGCCAACGCCCACGCGCGGAAAGCGACGCGGACGCTGGGTTTTTAATCAGTTGCGTTAATCATTGAGATAGCGACGGATAGCGCGTAATACCGCATCCGGTTTTTCAGCATGGACCCAG > CP009273/707261‑707557
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
