Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F83 I1 R1
|
393 |
530.9 |
9427126 |
91.1% |
8588111 |
148.0 |
Breseq alignment
N/A
GATK/CNVnator alignment
BRESEQ :: bam2aln output
TCCGAGGGA‑TCACGTGTCATTTATCGGAACAAACTCATTGGAGGTCATGCAGCAAGTCAAGACAAGGAGGAAAAAGATGTCAGTTGACCGTTCATATAGTCCCTACGAGGTTATTAGGATG‑‑TATCACGATAGAGGAATGATGAAATGGGGGGCATTTGCGACTGGGGAATTAACTGAAGCCCAAAATACTTTTGAAAAAGAAAAAAAAGAAGATAAGATAAT > CP043523/1885699‑1885920
|
TCCGAGGAT‑TCACGTGTCATTTATCGGAACAAACTCATTGGAGGTCATGCAGCAAGTCAAGACAAGGAGGTAAAAGATGTCAGTTGACCGTTCATACAGCCCCTATGAAGTCATCCG‑‑TGCTTATCACGATAGAGGGATGATGAAATGGGG > SRR13214404.2352385/1‑150 (MQ=37)
TCCGAGGAT‑TCACGTGTCATTTATCGGAACAAACTCATTGGAGGTCATGCAGCAAGTCAAGACAAGGAGGTAAAAGATGTCAGTTGACCGTTCATACAGCCCCTATGAAGTCATCCG‑‑TGCTTATCACGATAGAGGGATGATGAAATGGGG > SRR13214404.3028176/1‑150 (MQ=37)
TCCGAGGAT‑TCACGTGTCATTTATCGGAACAAACTCATTGGAGGTCATGCAGCAAGTCAAGACAAGGAGGTAAAAGATGTCAGTTGACCGTTCATACAGCCCCTATGAAGTCATCCG‑‑TGCTTATCACGATAGAGGGATGATGAAATGGGG < SRR13214404.1220950/150‑1 (MQ=37)
TCCGAGGAT‑TCACGTGTCATTTATCGGAACAAACTCATTGGAGGTCATGCAGCAAGTCAAGACAAGGAGGTAAAAGATGTCAGTTGACCGTTCATACAGCCCCTATGAAGTCATCCG‑‑TGCTTATCACGATAGAGGGATGATGAAATGGGG > SRR13214404.1609615/1‑150 (MQ=37)
GGATTCACGTGTCATTTATCGGAACAAACTCATTGGAGGTCATGCAGCAAGTCAAGACAAGGAGGTAAAAGATGTCAGTTGACCGTTCATACAGCCCCTATGAAGTCATCCG‑‑TGCTTATCACGATAGAGGGATGATGAAATGGGGCGCAT < SRR13214404.2281034/150‑1 (MQ=37)
gatTCACGTGTCATTTATCGGAACAAACTCATTGGAGGTCATGCAGCAAGTCAAGACAAGGAGGTAAAAGATGTCAGTTGACCGTTCATACAGCCCCTATGAAGTCATCCG‑‑TGCTTATCACGATAGAGGGATGATGAAATGGGGCGCATT < SRR13214404.1071003/147‑1 (MQ=38)
gatTCACGTGTCATTTATCGGAACAAACTCATTGGAGGTCATGCAGCAAGTCAAGACAAGGAGGTAAAAGATGTCAGTTGACCGTTCATACAGCCCCTATGAAGTCATCCG‑‑TGCTTATCACGATAGAGGGATGATGAAATGGGGCGCATT < SRR13214404.1070465/147‑1 (MQ=38)
gatTCACGTGTCATTTATCGGAACAAACTCATTGGAGGTCATGCAGCAAGTCAAGACAAGGAGGTAAAAGATGTCAGTTGACCGTTCATACAGCCCCTATGAAGTCATCCG‑‑TGCTTATCACGATAGAGGGATGATGAAATGGGGCGCATT > SRR13214404.1913576/4‑150 (MQ=38)
gatTCACGTGTCATTTATCGGAACAAACTCATTGGAGGTCATGCAGCAAGTCAAGACAAGGAGGTAAAAGATGTCAGTTGACCGTTCATACAGCCCCTATGAAGTCATCCG‑‑TGCTTATCACGATAGAGGGATGATGAAATGGGGCGCATT > SRR13214404.3178839/4‑150 (MQ=38)
gatTCACGTGTCATTTATCGGAACAAACTCATTGGAGGTCATGCAGCAAGTCAAGACAAGGAGGTAAAAGATGTCAGTTGACCGTTCATACAGCCCCTATGAAGTCATCCG‑‑TGCTTATCACGATAGAGGGATGATGAAATGGGGCGCATT < SRR13214404.4486896/147‑1 (MQ=38)
gatTCACGTGTCATTTATCGGAACAAACTCATTGGAGGTCATGCAGCAAGTCAAGACAAGGAGGTAAAAGATGTCAGTTGACCGTTCATACAGCCCCTATGAAGTCATCCG‑‑TGCTTATCACGATAGAGGGATGATGAAATGGGGCGCATT < SRR13214404.1587693/147‑1 (MQ=38)
gatTCACGTGTCATTTATCGGAACAAACTCATTGGAGGTCATGCAGCAAGTCAAGACAAGGAGGTAAAAGATGTCAGTTGACCGTTCATACAGCCCCTATGAAGTCATCCG‑‑TGCTTATCACGATAGAGGGATGATGAAATGGGGCGCATT > SRR13214404.4373341/4‑150 (MQ=38)
gatTCACGTGTCATTTATCGGAACAAACTCATTGGAGGTCATGCAGCAAGTCAAGACAAGGAGGTAAAAGATGTCAGTTGACCGTTCATACAGCCCCTATGAAGTCATCCG‑‑TGCTTATCACGATAGAGGGATGATGAAATGGGGCGCATT > SRR13214404.4372958/4‑150 (MQ=38)
atTCACGTGTCATTTATCGGAACAAACTCATTGGAGGTCATGCAGCAAGTCAAGACAAGGAGGTAAAAGATGTCAGTTGACCGTTCATACAGCCCCTATGAAGTCATCCG‑‑TGCTTATCACGATAGAGGGATGATGAAATGGGGCGCATTT < SRR13214404.4230771/148‑1 (MQ=37)
T‑TCACGTGTCATTTATCGGAACAAACTCATTGGAGGTCATGCAGCAAGTCAAGACAAGGAGGTAAAAGATGTCAGTTGACCGTTCATACAGCCCCTATGAAGTCATCCG‑‑TGCTTATCACGATAGAGGGATGATGAAATGGGGCGCATTTG < SRR13214404.4139726/150‑1 (MQ=37)
T‑TCACGTGTCATTTATCGGAACAAACTCATTGGAGGTCATGCAGCAAGTCAAGACAAGGAGGTAAAAGATGTCAGTTGACCGTTCATACAGCCCCTATGAAGTCATCCG‑‑TGCTTATCACGATAGAGGGATGATGAAATGGGGCGCATTTG < SRR13214404.1773589/150‑1 (MQ=37)
T‑TCACGTGTCATTTATCGGAACAAACTCATTGGAGGTCATGCAGCAAGTCAAGACAAGGAGGTAAAAGATGTCAGTTGACCGTTCATACAGCCCCTATGAAGTCATCCG‑‑TGCTTATCACGATAGAGGGATGATGAAATGGGGCGCATTTG < SRR13214404.4381222/150‑1 (MQ=37)
CACGTGTCATTTATCGGAACAAACTCATTGGAGGTCATGCAGCAAGTCAAGACAAGGAGGTAAAAGATGTCAGTTGACCGTTCATACAGCCCCTATGAAGTCATCCG‑‑TGCTTATCACGATAGAGGGATGATGAAATGGGGCGCATTTGCG < SRR13214404.757550/150‑1 (MQ=40)
CACGTGTCATTTATCGGAACAAACTCATTGGAGGTCATGCAGCAAGTCAAGACAAGGAGGTAAAAGATGTCAGTTGACCGTTCATACAGCCCCTATGAAGTCATCCG‑‑TGCTTATCACGATAGAGGGATGATGAAATGGGGCGCATTTGCG > SRR13214404.2448391/1‑150 (MQ=40)
CACGTGTCATTTATCGGAACAAACTCATTGGAGGTCATGCAGCAAGTCAAGACAAGGAGGTAAAAGATGTCAGTTGACCGTTCATACAGCCCCTATGAAGTCATCCG‑‑TGCTTATCACGATAGAGGGATGATGAAATGGGGCGCATTTGCG < SRR13214404.27891/150‑1 (MQ=40)
CACGTGTCATTTATCGGAACAAACTCATTGGAGGTCATGCAGCAAGTCAAGACAAGGAGGTAAAAGATGTCAGTTGACCGTTCATACAGCCCCTATGAAGTCATCCG‑‑TGCTTATCACGATAGAGGGATGATGAAATGGGGCGCATTTGCG < SRR13214404.4281443/150‑1 (MQ=40)
GTGTCATTTATCGGAACAAACTCATTGGAGGTCATGCAGCAAGTCAAGACAAGGAGGTAAAAGATGTCAGTTGACCGTTCATACAGCCCCTATGAAGTCATCCG‑‑TGCTTATCACGATAGAGGGATGATGAAATGGGGCGCATTTGCGACT > SRR13214404.2328752/1‑150 (MQ=41)
GTCATTTATCGGAACAAACTCATTGGAGGTCATGCAGCAAGTCAAGACAAGGAGGTAAAAGATGTCAGTTGACCGTTCATACAGCCCCTATGAAGTCATCCG‑‑TGCTTATCACGATAGAGGGATGATGAAATGGGGCGCATTTGCGACTGG > SRR13214404.970777/1‑150 (MQ=41)
CATTTATCGGAACAAACTCATTGGAGGTCATGCAGCAAGTCAAGACAAGGAGGTAAAAGATGTCAGTTGACCGTTCATACAGCCCCTATGAAGTCATCCG‑‑TGCTTATCACGATAGAGGGATGATGAAATGGGGCGCATTTGCGACTGGAG > SRR13214404.3331696/1‑150 (MQ=38)
ATTTATCGGAACAAACTCATTGGAGGTCATGCAGCAAGTCAAGACAAGGAGGTAAAAGATGTCAGTTGACCGTTCATACAGCCCCTATGAAGTCATCCG‑‑TGCTTATCACGATAGAGGGATGATGAAATGGGGCGCATTTGCGACTGGAGA < SRR13214404.4069739/150‑1 (MQ=35)
ATTTATCGGAACAAACTCATTGGAGGTCATGCAGCAAGTCAAGACAAGGAGGTAAAAGATGTCAGTTGACCGTTCATACAGCCCCTATGAAGTCATCCG‑‑TGCTTATCACGATAGAGGGATGATGAAATGGGGCGCATTTGCGACTGGAGA > SRR13214404.3063254/1‑150 (MQ=35)
ATTTATCGGAACAAACTCATTGGAGGTCATGCAGCAAGTCAAGACAAGGAGGTAAAAGATGTCAGTTGACCGTTCATACAGCCCCTATGAAGTCATCCG‑‑TGCTTATCACGATAGAGGGATGATGAAATGGGGCGCATTTGCGACTGGAGA < SRR13214404.2956205/150‑1 (MQ=35)
TTTATCGGAACAAACTCATTGGAGGTCATGCAGCAAGTCAAGACAAGGAGGTAAAAGATGTCAGTTGACCGTTCATACAGCCCCTATGAAGTCATCCG‑‑TGCTTATCACGATAGAGGGATGATGAAATGGGGCGCATTTGCGACTGGAGAA < SRR13214404.2338204/150‑1 (MQ=35)
TTATCGGAACAAACTCATTGGAGGTCATGCAGCAAGTCAAGACAAGGAGGTAAAAGATGTCAGTTGACCGTTCATACAGCCCCTATGAAGTCATCCG‑‑TGCTTATCACGATAGAGGGATGATGAAATGGGGCGCATTTGCGACTGGagaac < SRR13214404.1941374/150‑6 (MQ=35)
TATCGGAACAAACTCATTGGAGGTCATGCAGCAAGTCAAGACAAGGAGGTAAAAGATGTCAGTTGACCGTTCATACAGCCCCTATGAAGTCATCCG‑‑TGCTTATCACGATAGAGGGATGATGAAATGGGGCGCATTTGCGACTGGAGAACT > SRR13214404.498715/1‑150 (MQ=33)
TATCGGAACAAACTCATTGGAGGTCATGCAGCAAGTCAAGACAAGGAGGTAAAAGATGTCAGTTGACCGTTCATACAGCCCCTATGAAGTCATCCG‑‑TGCTTATCACGATAGAGGGATGATGAAATGGGGCGCATTTGCGACTGGAGAACT > SRR13214404.498826/1‑150 (MQ=33)
ATCGGAACAAACTCATTGGAGGTCATGCAGCAAGTCAAGACAAGGAGGTAAAAGATGTCAGTTGACCGTTCATACAGCCCCTATGAAGTCATCCG‑‑TGCTTATCACGATAGAGGGATGATGAAATGGGGCGCATTTGCGACTGGagaactc > SRR13214404.4570288/1‑143 (MQ=32)
ATCGGAACAAACTCATTGGAGGTCATGCAGCAAGTCAAGACAAGGAGGTAAAAGATGTCAGTTGACCGTTCATACAGCCCCTATGAAGTCATCCG‑‑TGCTTATCACGATAGAGGGATGATGAAATGGGGCGCATTTGCGACTGGagaactc < SRR13214404.967780/150‑8 (MQ=32)
TCGGAACAACCTCATTGGAGGTCATGCAGCAAGTCAAGACAAGGAGGTAAAAGATGTCAGTTGACCGTTCATACAGCCCCTATGAAGTCATCCG‑‑TGCTTATCACGATAGAGGGATGATGAAATGGGGCGCATTTGCGACTGGagaactca < SRR13214404.3152961/150‑9 (MQ=24)
TCGGAACAAACTCATTGGAGGTCATGCAGCAAGTCAAGACAAGGAGGTAAAAGATGTCAGTTGACCGTTCATACAGCCCCTATGAAGTCATCCG‑‑TGCTTATCACGATAGAGGGATGATGAAATGGGGCGCATTTGCGACTGGagaactca < SRR13214404.1619484/150‑9 (MQ=31)
GAACAAACTCATTGGAGGTCATGCAGCAAGTCAAGACAAGGAGGTAAAAGATGTCAGTTGACCGTTCATACAGCCCCTATGAAGTCATCCG‑‑TGCTTATCACGATAGAGGGATGATGAAATGGGGCGCATTTGCGACTGGagaactcacgg > SRR13214404.968188/1‑139 (MQ=27)
AACAAACTCATTGGAGGTCATGCAGCAAGTCAAGACAAGGAGGTAAAAGATGTCAGTTGACCGTTCATACAGCCCCTATGAAGTCATCCG‑‑TGCTTATCACGATAGAGGGATGATGAAATGGGGCGCATTTGCGACTGGagaactcacgga > SRR13214404.1800400/1‑138 (MQ=25)
AACAAACTCATTGGAGGTCATGCAGCAAGTCAAGACAAGGAGGTAAAAGATGTCAGTTGACCGTTCATACAGCCCCTATGAAGTCATCCG‑‑TGCTTATCACGATAGAGGGATGATGAAATGGGGCGCATTTGCGACTGGagaactcacgga < SRR13214404.35541/150‑13 (MQ=25)
CAAACTCATTGGAGGTCATGCAGCAAGTCAAGACAAGGAGGTAAAAGATGTCAGTTGACCGTTCATACAGCCCCTATGAAGTCATCCG‑‑TGCTTATCACGATAGAGGGATGATGAAATGGGGCGCATTTGCGACTGGagaactcacggagg > SRR13214404.987434/1‑136 (MQ=22)
CAAACTCATTGGAGGTCATGCAGCAAGTCAAGACAAGGAGGTAAAAGATGTCAGTTGACCGTTCATACAGCCCCTATGAAGTCATCCG‑‑TGCTTATCACGATAGAGGGATGATGAAATGGGGCGCATTTGCGACTGGagaactcacggagg < SRR13214404.3169037/150‑15 (MQ=22)
AAACTCATTGGAGGTCATGCAGCAAGTCAAGACAAGGAGGTAAAAGATGTCAGTTGACCGTTCATACAGCCCCTATGAAGTCATCCG‑‑TGCTTATCACGATAGAGGGATGATGAAATGGGGCGCATTTGCGACTGGagaactcacggaggc < SRR13214404.4629945/150‑16 (MQ=21)
AAACTCATTGGAGGTCATGCAGCAAGTCAAGACAAGGAGGTAAAAGATGTCAGTTGACCGTTCATACAGCCCCTATGAAGTCATCCG‑‑TGCTTATCACGATAGAGGGATGATGAAATGGGGCGCATTTGCGACTGGagaactcacggaggc > SRR13214404.3601058/1‑135 (MQ=21)
AACTCATTGGAGGTCATGCAGCAAGTCAAGACAAGGAGGTAAAAGATGTCAGTTGACCGTTCATACAGCCCCTATGAAGTCATCCG‑‑TGCTTATCACGATAGAGGGATGATGAAATGGGGCGCATTTGCGACTGGagaactcacggaggct < SRR13214404.2115388/150‑17 (MQ=21)
ACTCATTGGAGGTCATGCAGCAAGTCAAGACAAGGAGGTAAAAGATGTCAGTTGACCGTTCATACAGCCCCTATGAAGTCATCCG‑‑TGCTTATCACGATAGAGGGATGATGAAATGGGGCGCATTTGCGACTGGagaactcacggaggctc < SRR13214404.326645/150‑18 (MQ=19)
ACTCATTGGAGGTCATGCAGCAAGTCAAGACAAGGAGGTAAAAGATGTCAGTTGACCGTTCATACAGCCCCTATGAAGTCATCCG‑‑TGCTTATCACGATAGAGGGATGATGAAATGGGGCGCATTTGCGACTGGagaactcacggaggctc > SRR13214404.1232644/1‑133 (MQ=19)
ACTCATTGGAGGTCATGCAGCAAGTCAAGACAAGGAGGTAAAAGATGTCAGTTGACCGTTCATACAGCCCCTATGAAGTCATCCG‑‑TGCTTATCACGATAGAGGGATGATGAAATGGGGCGCATTTGCGACTGGagaactcacggaggctc > SRR13214404.2883099/1‑133 (MQ=19)
CTCATTGGAGGTCATGCAGCAAGTCAAGACAAGGAGGTAAAAGATGTCAGTTGACCGTTCATACAGCCCCTATGAAGTCATCCG‑‑TGCTTATCACGATAGAGGGATGATGAAATGGGGCGCATTTGCGACTGGagaactcacggaggctca > SRR13214404.231881/1‑132 (MQ=18)
CTCATTGGAGGTCATGCAGCAAGTCAAGACAAGGAGGTAAAAGATGTCAGTTGACCGTTCATACAGCCCCTATGAAGTCATCCG‑‑TGCTTATCACGATAGAGGGATGATGAAATGGGGCGCATTTGCGACTGGagaactcacggaggctca > SRR13214404.71958/1‑132 (MQ=18)
CTCATTGGAGGTCATGCAGCAAGTCAAGACAAGGAGGTAAAAGATGTCAGTTGACCGTTCATACAGCCCCTATGAAGTCATCCG‑‑TGCTTATCACGATAGAGGGATGATGAAATGGGGCGCATTTGCGACTGGagaactcacggaggctca > SRR13214404.3902941/1‑132 (MQ=18)
CTCATTGGAGGTCATGCAGCAAGTCAAGACAAGGAGGTAAAAGATGTCAGTTGACCGTTCATACAGCCCCTATGAAGTCATCCG‑‑TGCTTATCACGATAGAGGGATGATGAAATGGGGCGCATTTGCGACTGGagaactcacggaggctca < SRR13214404.3972158/150‑19 (MQ=18)
TCATTGGAGGTCATGCAGCAAGTCAAGACAAGGAGGTAAAAGATGTCAGTTGACCGTTCATACAGCCCCTATGAAGTCATCCG‑‑TGCTTATCACGATAGAGGGATGATGAAATGGGGCGCATTTGCGACTGGagaactcacggaggctcaa < SRR13214404.2659960/150‑20 (MQ=16)
ATTGGAGGTCATGCAGCAAGTCAAGACAAGGAGGTAAAAGATGTCAGTTGACCGTTCATACAGCCCCTATGAAGTCATCCG‑‑TGCTTATCACGATAGAGGGATGATGAAATGGGGCGCATTTGCGACTGGagaactcacggaggctcaaaa < SRR13214404.3578341/150‑22 (MQ=13)
ATTGGAGGTCATGCAGCAAGTCAAGACAAGGAGGTAAAAGATGTCAGTTGACCGTTCATACAGCCCCTATGAAGTCATCCG‑‑TGCTTATCACGATAGAGGGATGATGAAATGGGGCGCATTTGCGACTGGagaactcacggaggctcaaaa < SRR13214404.3581102/150‑22 (MQ=13)
ATTGGAGGTCATGCAGCAAGTCAAGACAAGGAGGTAAAAGATGTCAGTTGACCGTTCATACAGCCCCTATGAAGTCATCCG‑‑TGCTTATCACGATAGAGGGATGATGAAATGGGGCGCATTTGCGACTGGagaactcacggaggctcaaaa > SRR13214404.2667573/1‑129 (MQ=13)
TTGGAGGTCATGCAGCAAGTCAAGACAAGGAGGTAAAAGATGTCAGTTGACCGTTCATACAGCCCCTATGAAGTCATCCG‑‑TGCTTATCACGATAGAGGGATGATGAAATGGGGCGCATTTGCGACTGGagaactcacggaggctcaaaat > SRR13214404.527043/1‑128 (MQ=13)
TTGGAGGTCATGCAGCAAGTCAAGACAAGGAGGTAAAAGATGTCAGTTGACCGTTCATACAGCCCCTATGAAGTCATCCG‑‑TGCTTATCACGATAGAGGGATGATGAAATGGGGCGCATTTGCGACTGGagaactcacggaggctcaaaat < SRR13214404.1672447/150‑23 (MQ=13)
TTGGAGGTCATGCAGCAAGTCAAGACAAGGAGGTAAAAGATGTCAGTTGACCGTTCATACAGCCCCTATGAAGTCATCCG‑‑TGCTTATCACGATAGAGGGATGATGAAATGGGGCGCATTTGCGACTGGagaactcacggaggctcaaaat < SRR13214404.2130294/150‑23 (MQ=13)
TTGGAGGTCATGCAGCAAGTCAAGACAAGGAGGTAAAAGATGTCAGTTGACCGTTCATACAGCCCCTATGAAGTCATCCG‑‑TGCTTATCACGATAGAGGGATGATGAAATGGGGCGCATTTGCGACTGGagaactcacggaggctcaaaat < SRR13214404.4127353/150‑23 (MQ=13)
TGGAGGTCATGCAGCAAGTCAAGACAAGGAGGTAAAAGATGTCAGTTGACCGTTCATACAGCCCCTATGAAGTCATCCG‑‑TGCTTATCACGATAGAGGGATGATGAAATGGGGCGCATTTGCGACTGGagaactcacggaggctcaaaata < SRR13214404.2865856/150‑24 (MQ=13)
GGAGGTCATGCAGCAAGTCAAGACAAGGAGGTAAAAGATGTCAGTTGACCGAGCATACAGCCCCTAAGAAGTCATCCGTACT‑‑TATCACGATAGAGGGATGATGAAATGGGGCGCATTTGCGACTGGagaactcacggaggctcaaaatac < SRR13214404.1214735/150‑25 (MQ=28)
GAGGTCATGCAGCAAGTCAAGACAAGGAGGTAAAAGATGTCAGTTGACCGTTCATACAGCCCCTATGAAGTCATCCG‑‑TGCTTATCACGATAGAGGGATGATGAAATGGGGCGCATTTGCGACTGGagaactcacggaggctcaaaatact > SRR13214404.1373051/1‑125 (MQ=13)
GAGGTCATGCAGCAAGTCAAGACAAGGAGGTAAAAGATGTCAGTTGACCGTTCATACAGCCCCTATGAAGTCATCCG‑‑TGCTTATCACGATAGAGGGATGATGAAATGGGGCGCATTTGCGACTGGagaactcacggaggctcaaaatact > SRR13214404.1373847/1‑125 (MQ=13)
GAGGTCATGCAGCAAGTCAAGACAAGGAGGTAAAAGATGTCAGTGGACCGTTCATACAGCCCCTATGAAGTCATCCG‑‑TGCTTATCACGATAGAGGGATGATGAAATGGGGCGCATTTGCGACTGGagaactcacggaggctcaaaatact < SRR13214404.2479824/150‑26 (MQ=13)
AGGTCATGCAGCAAGTCAAGACAAGGAGGTAAAAGATGTCAGTTGACCGTTCATACAGCCCCTATGAAGTCATCCG‑‑TGCTTATCACGATAGAGGGATGATGAAATGGGGCGCATTTGCGACTGGAGAACTCACGGAGGCTCAAAATACTT > SRR13214404.4372874/1‑150 (MQ=11)
AGGTCATGCAGCAAGTCAAGACAAGGAGGTAAAAGATGTCAGTTGACCGTTCATACAGCCCCTATGAAGTCATCCG‑‑TGCTTATCACGATAGAGGGATGATGAAATGGGGCGCATTTGCGACTGGAGAACTCACGGAGGCTCAAAATACTT < SRR13214404.3494515/150‑1 (MQ=11)
GGTCATGCAGCAAGTCAAGACAAGGAGGTAAAAGATGTCAGTTGACCGTTCATACAGCCCCTATGAAGTCATCCG‑‑TGCTTATCACGATAGAGGGATGATGAAATGGGGCGCATTTGCGACTGGAGAACTCACGGAGGCTCAAAATACTTT < SRR13214404.4113816/150‑1 (MQ=11)
GGTCATGCAGCAAGTCAAGACAAGGAGGTAAAAGATGTCAGTTGACCGTTCATACAGCCCCTATGAAGTCATCCG‑‑TGCTTATCACGATAGAGGGATGATGAAATGGGGCGCATTTGCGACTGGAGAACTCACGGAGGCTCAAAATACTTT < SRR13214404.4442472/150‑1 (MQ=11)
GGTCATGCAGCAAGTCAAGACAAGGAGGTAAAAGATGTCAGTTGACCGTTCATACAGCCCCTATGAAGTCATCCG‑‑TGCTTATCACGATAGAGGGATGATGAAATGGGGCGCATTTGCGACTGGAGAACTCACGGAGGCTCAAAATACTTT > SRR13214404.245345/1‑150 (MQ=45)
GTCATGCAGCAAGTCAAGACAAGGAGGTAAAAGATGTCAGTTGACCGTTCATACAGCCCCTATGAAGTCATCCG‑‑TGCTTATCACGATAGAGGGATGATGAAATGGGGCGCATTTGCGACTGGAGAACTCACGGAGGCTCAAAATACTTTT > SRR13214404.1129406/1‑150 (MQ=44)
GTCATGCAGCAAGTCAAGACAAGGAGGTAAAAGATGTCAGTTGACCGTTCATACAGCCCCTATGAAGTCATCCG‑‑TGCTTATCACGATAGAGGGATGATGAAATGGGGCGCATTTGCGACTGGAGAACTCACGGAGGCTCAAAATACTTTT > SRR13214404.3561019/1‑150 (MQ=44)
GTCATGCAGCAAGTCAAGACAAGGAGGTAAAAGATGTCAGTTGACCGTTCATACAGCCCCTATGAAGTCATCCG‑‑TGCTTATCACGATAGAGGGATGATGAAATGGGGCGCATTTGCGACTGGAGAACTCACGGAGGCTCAAAATACTTTT > SRR13214404.1493369/1‑150 (MQ=44)
GTCATGCAGCAAGTCAAGACAAGGAGGTAAAAGATGTCAGTTGACCGTTCATACAGCCCCTATGAAGTCATCCG‑‑TGCTTATCACGATAGAGGGATGATGAAATGGGGCGCATTTGCGACTGGAGAACTCACGGAGGCTCAAAATACTTTT > SRR13214404.1129407/1‑150 (MQ=44)
GTCATGCAGCAAGTCAAGACAAGGAGGTAAAAGATGTCAGTTGACCGTTCATACAGCCCCTATGAAGTCATCCG‑‑TGCTTATCACGATAGAGGGATGATGAAATGGGGCGCATTTGCGACTGGAGAACTCACGGAGGCTCAAAATACTTTT > SRR13214404.3151429/1‑150 (MQ=44)
GTCATGCAGCAAGTCAAGACAAGGAGGTAAAAGATGTCAGTTGACCGTTCATACAGCCCCTATGAAGTCATCCG‑‑TGCTTATCACGATAGAGGGATGATGAAATGGGGCGCATTTGCGACTGGAGAACTCACGGAGGCTCAAAATACTTTT > SRR13214404.3163433/1‑150 (MQ=44)
TCATGCAGCAAGTCAAGACAAGGAGGTAAAAGATGTCAGTTGACCGTTCATACAGCCCCTATGAAGTCATCCG‑‑TGCTTATCACGATAGAGGGATGATGAAATGGGGCGCATTTGCGACTGGAGAACTCACGGAGGCTCAAAATACTTTTG < SRR13214404.1713935/150‑1 (MQ=42)
TCATGCAGCAAGTCAAGACAAGGAGGTAAAAGATGTCAGTTGACCGTTCATACAGCCCCTATGAAGTCATCCG‑‑TGCTTATCACGATAGAGGGATGATGAAATGGGGCGCATTTGCGACTGGAGAACTCACGGAGGCTCAAAATACTTTTG < SRR13214404.4710483/150‑1 (MQ=42)
TCATGCAGCAAGTCAAGACAAGGAGGTAAAAGATGTCAGTTGACCGTTCATACAGCCCCTATGAAGTCATCCG‑‑TGCTTATCACGATAGAGGGATGATGAAATGGGGCGCATTTGCGACTGGAGAACTCACGGAGGCTCAAAATACTTTTG < SRR13214404.3742060/150‑1 (MQ=42)
TCATGCAGCAAGTCAAGACAAGGAGGTAAAAGATGTCAGTTGACCGTTCATACAGCCCCTATGAAGTCATCCG‑‑TGCTTATCACGATAGAGGGATGATGAAATGGGGCGCATTTGCGACTGGAGAACTCACGGAGGCTCAAAATACTTTTG < SRR13214404.3742765/150‑1 (MQ=42)
ATGCAGCAAGTCAAGACAAGGAGGTAAAAGATGTCAGTTGACCGTTCATACAGCCCCTATGAAGTCATCCG‑‑TGCTTATCACGATAGAGGGATGATGAAATGGGGCGCATTTGCGACTGGAGAACTCACGGAGGCTCAAAATACTTTTGAA > SRR13214404.3289507/1‑150 (MQ=41)
ATGCAGCAAGTCAAGACAAGGAGGTAAAAGATGTCAGTTGACCGTTCATACAGCCCCTATGAAGTCATCCG‑‑TGCTTATCACGATAGAGGGATGATGAAATGGGGCGCATTTGCGACTGGAGAACTCACGGAGGCTCAAAATACTTTTGAA > SRR13214404.4094862/1‑150 (MQ=41)
TGCAGCAAGTCAAGACAAGGAGGTAAAAGATGTCAGTTGACCGTGCATACAGCCCCTATGAAGTCATCCG‑‑TGCTTATCACGATAGAGGGATGATGAAATGGGTCGCATTTGCGACTGAAGAACTCACTGAGGCTCAAAATACTTGTGAAA > SRR13214404.1529009/1‑150 (MQ=23)
GCAGCAAGTCAAGACAAGGAGGTAAAAGATGTCAGTTGACCGTTCATACAGCCCCTATGAAGTCATCCG‑‑TGCTTATCACGATAGAGGGATGATGAAATGGGGCGCATTTGCGACTGGAGAACTCACGGAGGCTCAAAATACTTTTGAAAA > SRR13214404.1078975/1‑150 (MQ=41)
GCAGCAAGTCAAGACAAGGAGGTAAAAGATGTCAGTTGACCGTTCATACAGCCCCTATGAAGTCATCCG‑‑TGCTTATCACGATAGAGGGATGATGAAATGGGGCGCATTTGCGACTGGAGAACTCACGGAGGCTCAAAATACTTTTGAAAA > SRR13214404.4312165/1‑150 (MQ=41)
AGCAAGTCAAGACAAGGAGGTAAAAGATGTCAGTTGACCGTTCATACAGCCCCTATGAAGTCATCCG‑‑TGCTTATCACGATAGAGGGATGATGAAATGGGGCGCATTTGCGACTGGAGAACTCACGGAGGCTCAAAATACTTTTGAAAAAG < SRR13214404.1642506/150‑1 (MQ=41)
AGCAAGTCAAGACAAGGAGGTAAAAGATGTCAGTTGACCGTTCATACAGCCCCTATGAAGTCATCCG‑‑TGCTTATCACGATAGAGGGATGATGAAATGGGGCGCATTTGCGACTGGAGAACTCACGGAGGCTCAAAATACTTTTGAAAAAG < SRR13214404.3418326/150‑1 (MQ=41)
AGCAAGTCAAGACAAGGAGGTAAAAGATGTCAGTTGACCGTTCATACAGCCCCTATGAAGTCATCCG‑‑TGCTTATCACGATAGAGGGATGATGAAATGGGGCGCATTTGCGACTGGAGAACTCACGGAGGCTCAAAATACTTTTGAAAAAG < SRR13214404.218216/150‑1 (MQ=41)
AGCAAGTCAAGACAAGGAGGTAAAAGATGTCAGTTGACCGTTCATACAGCCCCTATGAAGTCATCCG‑‑TGCTTATCACGATAGAGGGATGATGAAATGGGGCGCATTTGCGACTGGAGAACTCACGGAGGCTCAAAATACTTTTGAAAAAG > SRR13214404.4072125/1‑150 (MQ=41)
AGCAAGTCAAGACAAGGAGGTAAAAGATGTCAGTTGACCGTTCATACAGCCCCTATGAAGTCATCCG‑‑TGCTTATCACGATAGAGGGATGATGAAATGGGGCGCATTTGCGACTGGAGAACTCACGGAGGCTCAAAATACTTTTGAAAAAG > SRR13214404.712420/1‑150 (MQ=41)
AGCAAGTCAAGACAAGGAGGTAAAAGATGTCAGTTGACCGTTCATACAGCCCCTATGAAGTCATCCG‑‑TGCTTATCACGATAGAGGGATGATGAAATGGGGCGCATTTGCGACTGGAGAACTCACGGAGGCTCAAAATACGTTTGAAAAAG > SRR13214404.711654/1‑150 (MQ=33)
CAAGTCAAGACAAGGAGGTAAAAGATGTCAGTTGACCGTTCATACAGCCCCTATGAAGTCATCCG‑‑TGCTTATCACGATAGAGGGATGATGAAATGGGGCGCATTTGCGACTGGAGAACTCACGGAGGCTCAAAATACTTTTGAAAAAGAA > SRR13214404.66031/1‑150 (MQ=20)
AAGTCAAGACAAGGAGGTAAAAGATGTCAGTTGACCGTTCATACAGCCCCTATGAAGTCATCCG‑‑TGCTTATCACGATAGAGGGATGATGAAATGGGGCGCATTTGCGACTGGAGAACTCACGGAGGCTCAAAATACTTTTGAAAAAGAAA < SRR13214404.2337010/150‑1 (MQ=41)
AGTCAAGACAAGGAGGTAAAAGATGTCAGTTGACCGTTCATACAGCCCCTATGAAGTCATCCG‑‑TGCTTATCACGATAGAGGGATGATGAAATGGGGCGCATTTTCGACTGGAGAACTCACGGAGGCTCAAAATACTTTTGAAAAAGAAAA > SRR13214404.705390/1‑150 (MQ=33)
AGTCAAGACAAGGAGGTAAAAGATGTCAGTTGACCGTTCATACAGCCCCTATGAAGTCATCCG‑‑TGCTTATCACGATAGAGGGATGATGAAATGGGGCGCATTTGCGACTGGAGAACTCACGGAGGCTCAAAATACTTTTGAAAAAGAAAA < SRR13214404.2661490/150‑1 (MQ=41)
GTCAAGACAAGGAGGTAAAAGATGTCAGTTGACCGTTCATACAGCCCCTATGAAGTCATCCG‑‑TGCTTATCACGATAGAGGGATGATGAAATGGGGCGCATTTGCGACTGGAGAACTCACGGAGGCTCAAAATACTTTTGAAAAAGAAAAA > SRR13214404.3640529/1‑150 (MQ=41)
GTCAAGACAAGGAGGTAAAAGATGTCAGTTGACCGTTCATACAGCCCCTATGAAGTCATCCG‑‑TGCTTATCACGATAGAGGGATGATGAAATGGGGCGCATTTGCGACTGGAGAACTCACGGAGGCTCAAAATACTTTTGAAAAAGAAAAA < SRR13214404.1324032/150‑1 (MQ=41)
GTCAAGACAAGGAGGTAAAAGATGTCAGTTGACCGTTCATACAGCCCCTATGAAGTCATCCG‑‑TGCTTATCACGATAGAGGGATGATGAAATGGGGCGCATTTGCGACTGGAGAACTCACGGAGGCTCAAAATACTTTTGAAAAAGAAAAA < SRR13214404.1427308/150‑1 (MQ=41)
GTCAAGACAAGGAGGTAAAAGATGTCAGTTGACCGTTCATACAGCCCCTATGAAGTCATCCG‑‑TGCTTATCACGATAGAGGGATGATGAAATGGGGCGCATTTGCGACTGGAGAACTCACGGAGGCTCAAAATACTTTTGAAAAAGAAAAA < SRR13214404.1427100/150‑1 (MQ=41)
TCAAGACAAGGAGGTAAAAGATGTCAGTTGACCGTTCATACAGCCCCTATGAAGTCATCCG‑‑TGCTTATCACGATAGAGGGATGATGAAATGGGGCGCATTTGCGACTGGAGAACTCACGGAGGCTCAAAATACTTTTGAAAAAGAAAAAA < SRR13214404.390645/150‑1 (MQ=41)
AGACAAGGAGGTAAAAGATGTCAGTTGACCGTTCATACAGCCCCTATGAAGTCATCCG‑‑TGCTTATCACGATAGAGGGATGATGAAATGGGGCGCATTTGCGACTGGAGAACTCACGGAGGCTCAAAATACTTTTGAAAAAGAAAAAAAAG > SRR13214404.4421726/1‑150 (MQ=41)
CAAGGAGGTAAAAGATGTCAGTTGACCGTTCATACAGGCCCTATGAAGTCATCCG‑‑TGCTTATCACGATAGAGGTATGTTGAAATGGGGCGCAGTTGCGACTGGAGAACTCACGGAGGCTCAAAATACTTTTGAAAAAGAAAAAAAAGATG < SRR13214404.4184125/150‑1 (MQ=14)
CAAGGAGGTAAAAGATGTCAGTTGACCGTTCATACAGCCCCTATGAAGTCATCCG‑‑TGCTTATCACGATAGAGGGATGATGAAATGGGGCGCATTTGCGACTGGAGAACTCACGGAGGCTCAAAATACTTTTGAAAAAGAAAAAAAAGATG < SRR13214404.345607/150‑1 (MQ=17)
CAAGGAGGTAAAAGATGTCAGTTGACCGTTCATACAGCCCCTATGAAGTCATCCG‑‑TGCTTATCACGATAGAGGGATGATGAAATGGGGCGCATTTGCGACTGGAGAACTCACGGAGGCTCAAAATACTTTTGAAAAAGAAAAAAAAGATG < SRR13214404.3241421/150‑1 (MQ=17)
CAAGGAGGTAAAAGATGTCAGTTGACCGTTCATACAGCCCCTATGAAGTCATCCG‑‑TGCTTATCACGATAGAGGGATGATGAAATGGGGCGCATTTGCGACTGGAGAACTCACGGAGGCTCAAAATACTTTTGAAAAAGAAAAAAAAGATG > SRR13214404.1832329/1‑150 (MQ=38)
CAAGGAGGTAAAAGATGTCAGTTGACCGTTCATACAGCCCCTATGAAGTCATCCG‑‑TGCTTATCACGATAGAGGGATGATGAAATGGGGCGCATTTGCGACTGGAGAACTCACGGAGGCTCAAAATACTTTTGAAAAAGAAAAAAAAGATG < SRR13214404.2411049/150‑1 (MQ=17)
AAGGAGGTAAAAGATGTCAGTTGACCGTTCATACAGCCCCTATGAAGTCATCCG‑‑TGCTTATCACGATAGAGGGATGATGAAATGGGGCGCATTTGCGACTGGAGAACTCACGGAGGCTCAAAATACTTTTGAAAAAGAAAAAAAAGATGA < SRR13214404.3942363/150‑1 (MQ=16)
AAGGAGGTAAAAGATGTCAGTTGACCGTTCATACAGCCCCTATGAAGTCATCCG‑‑TGCTTATCACGATAGAGGGATGATGAAATGGGGCGCATTTGCGACTGGAGAACTCACGGAGGCTCAAAATACTTTTGAAAAAGAAAAAAAAGATGA < SRR13214404.2481431/150‑1 (MQ=16)
GGAGGTAAAAGATGTCAGTTGACCGTTCATACAGCCCCTATGAAGTCATCCG‑‑TGCTTATCACGATAGAGGGATGATGAAATGGGGCGCATTTGCGACTGGAGAACTCACGGAGGCTCAAAATACTTTTGAAAAAGAAAAAAAAGATGATA < SRR13214404.1897359/150‑1 (MQ=36)
GAGGTAAAAGATGTCAGTTGACCGTTCATACAGCCCCTATGAAGTCATCCG‑‑TGCTTATCACGATAGAGGGATGATGAAATGGGGCGCATTTGCGACTGGAGAACTCACGGAGGCTCAAAATACTTTTGAAAAAGAAAAAAAAGATGATAA < SRR13214404.1668553/150‑1 (MQ=38)
GAGGTAAAAGATGTCAGTTGACCGTTCATACAGCCCCTATGAAGTCATCCG‑‑TGCTTATCACGATAGAGGGATGATGAAATGGGGCGCATTTGCGACTGGAGAACTCACGGAGGCTCAAAATACTTTTGAAAAAGAAAAAAAAGATGATAA < SRR13214404.3851325/150‑1 (MQ=38)
GAGGTAAAAGATGTCAGTTGACCGTTCATACAGCCCCTATGAAGTCATCCG‑‑TGCTTATCACGATAGAGGGATGATGAAATGGGGCGCATTTGCGACTGGAGAACTCACGGAGGCTCAAAATACTTTTGAAAAAGAAAAAAAAGATGATAA > SRR13214404.1164050/1‑150 (MQ=38)
AGGTAAAAGATGTCAGTTGACCGTTCATACAGCCCCTATGAAGTCATCCG‑‑TGCTTATCACGATAGAGGGATGATGAAATGGGGCGCATTTGCGACTGGAGAACTCACGGAGGCTCAAAATACTTTTGAAAAAGAAAAAAAAGATGATAAG > SRR13214404.1400885/1‑150 (MQ=39)
AGGTAAAAGATGTCAGTTGACCGTTCATACAGCCCCTATGAAGTCATCCG‑‑TGCTTATCACGATAGAGGGATGATGAAATGGGGCGCATTTGCGACTGGAGAACTCACGGAGGCTCAAAATACTTTTGAAAAAGAAAAAAAAGATGATAAG > SRR13214404.845866/1‑150 (MQ=39)
AGGTAAAAGATGTCAGTTGACCGTTCATACAGCCCCTATGAAGTCATCCG‑‑TGCTTATCACGATAGAGGGATGATGAAATGGGGCGCATTTGCGACTGGAGAACTCACGGAGGCTCAAAATACTTTTGAAAAAGAAAAAAAAGATGATAAG < SRR13214404.803760/150‑1 (MQ=39)
AGGTAAAAGATGTCAGTTGACCGTTCATACAGCCCCTATGAAGTCATCCG‑‑TGCTTATCACGATAGAGGGATGATGAAATGGGGCGCATTTGCGACTGGAGAACTCACGGAGGCTCAAAATACTTTTGAAAAAGAAAAAAAAGATGATAAG < SRR13214404.803712/150‑1 (MQ=39)
AGGTAAAAGATGTCAGTTGACCGTTCATACAGCCCCTATGAAGTCATCCG‑‑TGCTTATCACGATAGAGGGATGATGAAATGGGGCGCATTTGCGACTGGAGAACTCACGGAGGCTCAAAATACTTTTGAAAAAGAAAAAAAAGATGATAAG > SRR13214404.2308970/1‑150 (MQ=39)
AAAAGATGTCAGTTGACCGTTCATACAGCCCCTATGAAGTCATCCG‑‑TGCTTATCACGATAGAGGGATGATGAAATGGGGCGCATTTGCGACTGGAGAACTCACGGAGGCTCAAAATACTTTTGAAAAAGAAAAAAAAGATGATAAGAAAA > SRR13214404.726762/1‑150 (MQ=41)
AAAAGATGTCAGTTGACCGTTCATACAGCCCCTATGAAGTCATCCG‑‑TGCTTATCACGATAGAGGGATGATGAAATGGGGCGCATTTGCGACTGGAGAACTCACGGAGGCTCAAAATACTTTTGAAAAAGAAAAAAAAGATGATAAGAAAA < SRR13214404.2666078/150‑1 (MQ=41)
AAAAGATGTCAGTTGACCGTTCATACAGCCCCTATGAAGTCATCCG‑‑TGCTTATCACGATAGAGGGATGATGAAATGGGGCGCATTTGCGACTGGAGAACTCACGGAGGCTCAAAATACTTTTGAAAAAGAAAAAAAAGATGATAAGAAAA < SRR13214404.1995212/150‑1 (MQ=41)
AAAGATGTCAGTTGACCGTTCATACAGCCCCTATGAAGTCATCCG‑‑TGCTTATCACGATAGAGGGATGATGAAATGGGGCGCATTTGCGACTGGAGAACTCACGGAGGCTCAAAATACTTTTGAAAAAGAAAAAAAAGATGATAAGAAAAT > SRR13214404.2737553/1‑150 (MQ=20)
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TCCGAGGGA‑TCACGTGTCATTTATCGGAACAAACTCATTGGAGGTCATGCAGCAAGTCAAGACAAGGAGGAAAAAGATGTCAGTTGACCGTTCATATAGTCCCTACGAGGTTATTAGGATG‑‑TATCACGATAGAGGAATGATGAAATGGGGGGCATTTGCGACTGGGGAATTAACTGAAGCCCAAAATACTTTTGAAAAAGAAAAAAAAGAAGATAAGATAAT > CP043523/1885699‑1885920
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
