Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F50 I1 R2
|
870 |
341.9 |
11209456 |
97.2% |
10895591 |
138.9 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NZ_CP025268 |
1,204,628 |
A→G |
V2A (GTA→GCA) |
ymfD ← |
class I SAM‑dependent methyltransferase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NZ_CP025268 | 1,204,628 | 0 | A | G | 96.6%
| 181.0
/ ‑1.4
| 59 | V2A (GTA→GCA) | ymfD | class I SAM‑dependent methyltransferase |
| Reads supporting (aligned to +/- strand): ref base A (1/1); new base G (28/29); total (29/30) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.92e-01 |
GCCAAAATCAAGGGCGTGGCCATTTTTCTCAATGCTTCTAATATACTCGCAAAGATATCTAGAGGGCATCGTATGAGGTTTTGCTGCATTCTCTGAGCGAATATTAACTCCGTGCATATTATAGTTCAAAGCAAGTACCATTCAATTAATGTTATTTTTAGTGAAAAATTCTTTTATTTTATCGTCCGGGATTTTTCCGACTTGACTTTCAGTTCTGGGCTTAACTGTCAAAGCAAAGATAATACCACTCACTGAGAATGATAAAA > NZ_CP025268/1204492‑1204757
|
gCCAAAATCAAGGGCGTGGCCATTTTTCTCAATGCTTCTAATGTACTCGCAAAGATATCTAGAGGGCATCGTATGAGGTTTTGCTGCATTCTCTGAGCGAATATTAACTCCGTGCATATTATAGTTCAAAGCAAGTGCCa < 1:2955104/140‑1 (MQ=255)
gCCAAAATCAAGGGCGTGGCCATTTTTCTCAATGCTTCTAATATACTCGCAAAGATATCTAGAGGGCATCGTATGAGGTTTTGCTGCATTCTCTGAGCGAATATTAACTCCGTGCATATTATAGTTCAAAGCAAGTGCCa < 2:1168668/140‑1 (MQ=255)
aTCAAGGGCGTGGCCATTTTTCTCATTGCTTCTAATATACTCGCAAAGATATCTAGAGGGCATCGTATGAGGTTTTGCTGCATTCTCTGAGCGAATATTAACTCCGTGCATATTATAGTTCAAAGCAAGTGCCATTCAAt < 2:3228353/140‑1 (MQ=255)
aTCAAGGGCGTGGCCATTTTTCTCAATGCTTCTAATATACTCGCAAAGATATCTAGAGAGCATCGTATGAGGTTTTGCTGCATTCTCTGAGCGAATATTAACTCCGTGCATATTATAGTTCAAAGCAACTGCCATTCAAt < 1:4641662/140‑1 (MQ=255)
cAAGGGCGTGGCCATTTTTCTCAATGCTTCTAATATACTCGCAAAGATATCTAGAGGGCATCGTATGAGGTTTTGCTGCATTCTCTGAGCGAATATTAACTCCGTGCATATTATAGTTCAAAGCAAGTGCCATTCAATTa < 2:3660450/140‑1 (MQ=255)
gggCGTGGCCATTTTTCTCAATGCTTCTAATATACTCGCAAAGATATCTAGAGGGCATCGTATGAGGGTTTGCTGCATTCTCTGAGCGAATATTAACTCCGTGCATATTATAGTTCAAAGCAAGTGCCATTCAATTAATg > 2:4983758/1‑140 (MQ=255)
gggCGTGGCCATTTTTCTCAATGCTTCTAATATACTCGCAAAGATATCTAGAGGGCATCGTATGAGGGTTTGCTGCATTCTCTGAGCGAATATTAACTCCGTGCATATTATAGTTCAAAGCAAGTGCCATTCAATTAATg > 2:4983857/1‑140 (MQ=255)
cATTTTTCTCAATGCTTCTAATATACTCGCAAAGATATCTAGAGGGCATCGTATGAGGTTTTGCTGCATTCTCTGAGCGAATATTAACTCCGTGCATATTATAGTTCAAAGCAAGTGCCATTCAATTAATGTTATTTTTa < 1:4668779/140‑1 (MQ=255)
cTCGCAAAGATATCTAGAGGGCATCGTATGAGGTTTTGCTGCATTCTCTGAGCGAATATTAACTCCGTGCATGTTATAGTTCAAAGCAAGTGCCATTCAATTAATGTTATTTTTAGTGAAAAATTCTTTTATTTTATCGt > 1:2172773/1‑140 (MQ=255)
tCGCAAAGATATCTAGAGGGCATCGTATGAGGTTTTGCTGCATTCTCTGAGCGAATATTAACTCCGTGCATATTATAGTTCAAAGCAAGTGCCATTCAATTAATGTTATTTTTAGTGAAAAATTCTTTTATTTTATCGTc < 1:3245537/140‑1 (MQ=255)
agGGCATCGTATGAGGTTTTGCTGCATTCTCTGAGCGAATATTAACTCCGTGCATATTATAGTTCAAAGCAAGTGCCATTCAATTAATGTTATTTTTAGTGAAAAATTCTTTTATTTTATCGTCCGGGATTTTTCCgact < 2:2642475/140‑1 (MQ=255)
ggCATCGTATGAGGTTTTGCTGCATTCTCTGAGCGAATATTAACTCCGTGCATATTATAGTTCAAAGCAAGTGCCATTCAAt > 1:906549/1‑82 (MQ=255)
ggCATCGTATGAGGTTTTGCTGCATTCTCTGAGCGAATATTAACTCCGTGCATATTATAGTTCAAAGCAAGTGCCATTCAAt < 2:906549/82‑1 (MQ=255)
ggCATCGTATGAGGTTTTGCTGCATTCTCTGAGCGAATATTAACTCCGTGCATATTATAGTTCAAAGCAAGTGCCATTCAATTAATGTTATTTTTAGTGAAAAATTCTTTTATTTTATCGTCCGGGATTTTTCCgacttg < 1:2362808/140‑1 (MQ=255)
ggCATCGTATGAGGTTTTGCTGCATTCTCTGAGCGAATATTAACTCCGTGCATATTATAGTTCAAAGCAAGTGCCATTCAATTAATGTTATTTTTAGTGAAAAATTCTTTTATTTTATCGTCCGGGATTTTTCCgacttg > 1:3922196/1‑140 (MQ=255)
ggCATCGTATGAGGTTTTGCTGCATTCTCTGAGCGAATATTAACTCCGTGCATATTATAGTTCAAAGCAAGTGCCATTCAATTAATGTTATTTTTAGTGAAAAATTCTTTTATTTTATCGTCCGGGATTTTTCCgacttg > 2:959062/1‑140 (MQ=255)
ggCATCGTATGAGGTTTTGCTGCATTCTCTGAGCGAATATTAACTCCGTGCATATTATAGTTCAAAGCAAGTACCATTCAATTAATGTTATTTTTAGTGAAAAATTCTTTTATTTTATCGTCCGGGATTTTTCCgacttg > 1:480759/1‑140 (MQ=255)
ggCATCGTATGAGGTTTTGCTGCATTCTCTGAGCGAATATTAACTCCGTGCATATGATAGTTCAAAGCAAGTGCCATTCAATTAATGTTATTTTTAGTGAAAAATTCTTTTATTTTATCGTCCGGGATTTTTCCgacttg > 2:2689623/1‑140 (MQ=255)
aTCGTATGAGGTTTTGCTGCATTCTCTGAGCGAATATTAACTCCGTGCATATTATAGTTCAAAGCAAGTGCCATTCAATTAATGTTATTTTTAGTGAAAAATTCTTTTATTTTATCGTCCGGGATTTTTCCgacttgact > 1:4053127/1‑140 (MQ=255)
aGGTTTTGCTGCATTCTCTGAGCGAATATTAACTCCGTGCATATTATAGTTCAAAGCAAGTGCCATTCAATTAATGTTATTTTTAGTGAAAAATTCTTTTATTTTATCGTCCGGGATTTTTCCGACTTGACTTTCAGTTc < 1:5459944/140‑1 (MQ=255)
tttGCTGCATTCTCTGAGCGAATATTAACTCCGTGCATATTATAGTTCAAAGCAAGTGCCATTCAATTAATGTTATTTTTAGTGAAAAATTCTTTTATTTTATCGTCCGGGATTTTTCCGACTTGACTTTCAGTTCTggg > 1:5274234/1‑140 (MQ=255)
tgctgcATTCTCTGAGCGAATATTAACTCCGTGCATATTATAGTTCAAAGCAAGTGCCATTCAATTAATGTTATTTTTAGTGACAAATTCTTTTATTTTATCGTCCGGGATTTTTCCGACTTGACTTTCAGTTCTGGGCt < 1:4340329/140‑1 (MQ=255)
gcATTCTCTGAGCGAATATTAACTCCGTGCATATTATAGTTCAAAGCAAGTGCCATTCAATTAATGTTATTTTTAGTGAAAAATTCTTTTATTTTATCGTCCGGGATTTTTCCGACTTGACTTTCAGTTCTGGGCTTAAc < 1:1484569/140‑1 (MQ=255)
tctcTGAGCGAATATTAACTCCGTGCATATTATAGTTCAAAGCAAGTGCCATTCAATTAATGTTATTTTTAGTGAAAAATTCTTTTATTTTATCGTCCGGGATTTTTCCGACTTGACTTTCAGTTCTGGGCTTAACTGTc < 2:3922196/140‑1 (MQ=255)
tctGAGCGAATATTAACTCCGTGCATATTATAGTTCAAAGCAAGTGCCATTCAATTAATGTTATTTTTAGTGAAAAATTCTTTTATTTTATCGTCCGGGATTTTTCCGACTTGACTTTCAGTTCTGGGCTTAACTGTcaa > 2:5444454/1‑140 (MQ=255)
gAGCGAATATTAACTCCGTGCATATTATAGTTCAAAGCAAGTGCCATTCAATTAATGTTATTTTTAGTGAAAAATTCTTTTATTTTATCGTCCGGGATTTTTCCGACTTGACTTTCAGTTCTGGGCTTAACTGTcaaagc < 1:5451257/140‑1 (MQ=255)
gAGCGAATATTAACTCCGTGCATATTATAGTTCAAAGCAAGTGCCATTCAATTAATGTTATTTTTAGTGAAAAATTCTTTTATTTTATCGTCCGGGATTTTTCCGACTTGACTTTCAGTTCTGGGCTTAACTGTcaaagc < 1:3025562/140‑1 (MQ=255)
gAGCGAATATTAACTCCGTGCATATTATAGTTCAAAGCAAGTGCCATTCAATTAATGTTATTTTTAGTGAAAAATTCTTTTATTTTATCGTCCGGGATTTTTCCGACTTGACTTTCAGTTCTGGGCTTAACTGTcaaagc < 2:2423585/140‑1 (MQ=255)
gAGCGAATATTAACTCCGTGCATATTATAGTTCAAAGCAAGTACCATTCAATTAATGTTATTTTTAGTGAAAAATTCTTTTATTTTATCGTCCGGGATTTTTCCGACTTGACTTTCAGTTCTGGGCTTAACTGTcaaagc < 2:480759/140‑1 (MQ=255)
aGCGAATATTAACTCCGTGCATATTATAGTTCAAAGCAAGTGCCATTCAATTAATGTTATTTTTAGTGAAAAATTCTTTTATTTTATCGTCCGGGATTTTTCCGACTTGACTTTCAGTTCTGGGCTTAACTGTcaaagca < 1:959062/140‑1 (MQ=255)
aGCGAATATTAACTCCGTGCATATTATAGTTCAAAGCAAGTGCCATTCAATTAATGTTATTTTTAGTGAAAAATTCTTTTATTTTATCGTCCGGGATTTTTCCGACTTGACTTTCAGTTCTGGGCTTAACTGTcaaagca < 2:1460962/140‑1 (MQ=255)
gCGAATATTAACTCCGTGCATATTATAGTTCAAAGCAAGTGCCATTCAATTAATGTTATTTTTAGTGAAAAATTCTTTTATTTTATCGTCCGGGATTTTTCCGACTTGACttt > 2:1654386/1‑113 (MQ=255)
gCGAATATTAACTCCGTGCATATTATAGTTCAAAGCAAGTGCCATTCAATTAATGTTATTTTTAGTGAAAAATTCTTTTATTTTATCGTCCGGGATTTTTCCGACTTGACttt > 2:1654332/1‑113 (MQ=255)
gCGAATATTAACTCCGTGCATATTATAGTTCAAAGCAAGTGCCATTCAATTAATGTTATTTTTAGTGAAAAATTCTTTTATTTTATCGTCCGGGATTTTTCCGACTTGACttt < 1:1654332/113‑1 (MQ=255)
gCGAATATTAACTCCGTGCATATTATAGTTCAAAGCAAGTGCCATTCAATTAATGTTATTTTTAGTGAAAAATTCTTTTATTTTATCGTCCGGGATTTTTCCGACTTGACttt < 1:1654386/113‑1 (MQ=255)
gCGAATATTAACTCCGTGCATATTATAGTTCAAAGCAAGTGCCATTCAATTAATGTTATTTTTAGTGAAAAATTCTTTTATTTTATCGTCCGGGATTTTTCCGACTTGACTTTCAGTTCTGGGCTTAACTGTcaaagcaa > 1:4004433/1‑140 (MQ=255)
gCGAATATTAACTCCGTGCATATTATAGTTCAAAGCAAGTGCCATTCAATTAATGTTATTTTTAGTGAAAAATTCTTTTATTTTATCGTCCGGGATTTTTCCGACTTGACTTTCAGTTCTGGGCTTAACTGTcaaagcaa > 2:3283807/1‑140 (MQ=255)
aaTATTAACTCCGTGCATATTATAGTTCAAAGCAAGTGCCATTCAATTAATGTTATTTTTAGTGAAAAATTCTTTTATTTTATCGTCCGGGATTTTTCCGACTTGACTTTCAGTTCTGGGCTTAACTGTCAAAGCAAAGa < 2:2263412/140‑1 (MQ=255)
aaTATTAACTCCGTGCATATTATAGTTCAAAGCAAGTGCCATTCAATTAATGTTATTTTTAGTGAAAAATTCTTTTATTTTATCGTCCGGGATTTTTCCGACTTGACTTTCAGTTCTGGGCTTAACTGTCAAAGCAAAGa < 2:2263648/140‑1 (MQ=255)
tatTAACTCCGTGCATATTATAGTTCAAAGCAAGTGCCATTCAATTAATGTTATTTTTAGTGAAAAATTCTTTTATTTTATCGTCCGGGATTTTTCCGACTTGACTTTCAGTTCTGGGCTTAACTGTCAAAGCAAAGata > 1:928541/1‑140 (MQ=255)
aaCTCCGTGCATATTATAGTTCAAAGCAAGTGCCATTCAATTAATGTTATTTTTAGTGAAAAATTCTTTTATTTTATCGTCCGGGATTTTTCCGACTTGACTTTCAGTTCTGGGCTTAACTGTCAAAGCAAAGATAATAc < 2:1083332/140‑1 (MQ=255)
cTCCGTGCATATTATAGTTCAAAGCAAGTGCCATTCAATTAATGTTATTTTTAGTGAAAAATTCTTTTATTTTATCGTCCGGGATTTTTCCGACTTGACTTTCAGTTCTGGGCTTAACTGTCAAAGCAAAGATAATACca < 2:2648264/140‑1 (MQ=255)
ccGTGCATATTATAGTTCAAAGCAAGTGCCATTCAATTAATGTTATTTTTAGTGAAAAATTCTTTTATTTTATCGTCCGGGATTTTTCCGACTTGACTTTCAGTTCTGGGCTTAACTGTCAAAGCAAAGATAATACcact < 2:5291808/140‑1 (MQ=255)
cGTGCATATTATAGTTCAAAGCAAGTGCCATTCAATTAATGTTATTTTTAGGGAAAAATTCTTTTATTGTATCGTTCGGGATTTTTCCGACTTGACTTTCAGTTCTGTGCGGAACTGTAAAAGCAAAGATAATAAcactc > 2:1928961/1‑140 (MQ=255)
tGCATATTATAGTTCAAAGCAAGTGCCATTCAATTAATGTTATTTTTAGTGAAAAATTCTTTTATTTTATCGTCCGGGATTTTTCCGACTTGACTTTCAGTTCTGGGCTTAACTGTCAAAGCAAAGATAATACcactcac > 1:938686/1‑140 (MQ=255)
tGCATATTATAGTTCAAAGCAAGTGCCATTCAATTAATGTTATTTTTAGTGAAAAATTCTTTTATTTTATCGTCCGGGATTTTTCCGACTTGACTTTCAGTTCTGGGCTTAACTGTCAAAGCAAAGATAATACcactcac > 1:2088076/1‑140 (MQ=255)
tGCATATTATAGTTCAAAGCAAGTGCCATTCAATTAATGTTATTTTTAGTGAAAAATTCTTTTATTTTATCGTCCGGGATTTTTCCGACTTGACTTTCAGTTCTGGGCTTAACTGTCAAAGCAAAGATAATACcactcac > 1:2749004/1‑140 (MQ=255)
tGCATATTATAGTTCAAAGCAAGTGCCATTCAATTAATGTTATTTTTAGTGAAAAATTCTTTTATTTTATCGTCCGGGATTTTTCCGACTTGACTTTCAGTTCTGGGCTTAACTGTCAAAGCAAAGATAATACcactcac > 1:2749046/1‑140 (MQ=255)
tGCATATTATAGTTCAAAGCAAGTGCCATTCAATTAATGTTATTTTTAGTGAAAAATTCTTTTATTTTATCGTCCGGGATTTTTCCGACTTGACTTTCAGTTCTGGGCTTAACTGTCAAAGCAAAGATAATACcactcac > 1:3935567/1‑140 (MQ=255)
tGCATATTATAGTTCAAAGCAAGTGCCATTCAATTAATGTTATTTTTAGTGAAAAATTCTTTTATTTTATCGTCCGGGATTTTTCCGACTTGACTTTCAGTTCTGGGCTTAACTGTCAAAGCAAAGATAATACcactcac > 2:3151661/1‑140 (MQ=255)
tGCATATTATAGTTCAAAGCAAGTGCCATTCAATTAATGTTATTTTTAGTGAAAAATTCTTTTATTTTATCGTCCGGGATTTTTCCGACTTGACTTTCAGTTCTGGGCTTAACTGTCAAAGCAAAGATAATACcactcac > 1:5129985/1‑140 (MQ=255)
tGCATATTATAGTTCAAAGCAAGTGCCATTCAATTAATGTTATTTTTAGTGAAAAATTCTTTTATTTTATCGTCCGGGATTTTTCCGACTTGACTTTCAGTTCTGGGCTTAACTGTCAAAGCAAAGATAATACcactcac > 2:2652029/1‑140 (MQ=255)
gaatatTATAGTTCAAAGCAAGTGCCATTCAATTAATGTTATTTTTAGTGAAAAATTCTTTTCTTTTATCGTCCGGGATTTTTCCGACTTGACTTTCAGTTCTGGGCTTAACTGTCAAAGCAAAGATCATACcactcact < 1:3452443/138‑1 (MQ=255)
gCATATTATAGTTCAAAGCAAGTGCCATTCAATTAATGTTATTTTTAGTGAAAAATTCTTTTATTTTATCGTCCGGGATTTTTCCGACTTGACTTTCAGTTCTGGGCTTAACTGTCAAAGCAAAGATAATACcactcact < 1:5444454/140‑1 (MQ=255)
tattatAGTTCAAAGCAAGTGCCATTCAATTAATGTTATTTTTAGTGAAAAATTCTTTTATTTTATCGTCCGGGATTTTTCCGACTTGACTTTCAGTTCTGGGCTTAACTGTCAAAGCAAAGATAATACCACTCACTgag < 1:3842378/140‑1 (MQ=255)
aGTTCAAAGCAAGTGCCATTCAATTAATGTTATTTTTAGTGAAAAATTCTTTTATTTTATCGTCCGGGATTTTTCCGACTTGACTTTCAGTTCTGGGCTTAACTGTCAAAGCAAAGATAATACCACTCACTGAGAATGAt > 2:3585597/1‑140 (MQ=255)
aGTTCAAAGCAAGTGCCATTCAATTAATGTTATTTTTAGTGAAAAATTCTTTTATTTTATCGTCCGGGATTTTTCCGACTTGACTTTCAGTTCTGGGCTTAACTGTCAAAGCAAAGATAATACCACTCACTGAGAATGAt > 2:3546576/1‑140 (MQ=255)
aGTTCAAAGCAAGTGCCATTCAATTAATGTTATTTTTAGTGAAAAATTCTTTTATTTTATCGTCCGGGATTTTTCCGACTTGACTTTCAGTTCTGGACTTAACTGTCAAAGCAATGATAATACCACTCACTGAGAATGAt > 1:5095586/1‑140 (MQ=255)
cAAAGCAAGTGCCATTCAATTAATGTTATTTTTAGTGAAAAATTCTTTTATTTTATCGTCCGGGATTTTTCCGACTTGACTTTCAGTTCTGGGCTTAACTGTCAAAGCAAAGATAATACCACTCACTGAGAATGATaaaa > 2:1303987/1‑140 (MQ=255)
|
GCCAAAATCAAGGGCGTGGCCATTTTTCTCAATGCTTCTAATATACTCGCAAAGATATCTAGAGGGCATCGTATGAGGTTTTGCTGCATTCTCTGAGCGAATATTAACTCCGTGCATATTATAGTTCAAAGCAAGTACCATTCAATTAATGTTATTTTTAGTGAAAAATTCTTTTATTTTATCGTCCGGGATTTTTCCGACTTGACTTTCAGTTCTGGGCTTAACTGTCAAAGCAAAGATAATACCACTCACTGAGAATGATAAAA > NZ_CP025268/1204492‑1204757
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
AAGTTTTCCGCAGCCAAAATCAAGGGCGTGGCCATTTTTCTCAATGCTTCTAATATACTCGCAAAGATATCTAGAGGGCATCGTATGAGGTTTTGCTGCATTCTCTGAGCGAATATTAACTCCGTGCATATTATAGTTCAAAGCAAGTACCATTCAATTAATGTTATTTTTAGTGAAAAATTCTTTTATTTTATCGTCCGGGATTTTTCCGACTTGACTTTCAGTTCTGGGCTTAACTGTCAAAGCAAAGATAATACCACTCACTGAGAATGATAAAATTACAAAAAAGAATAAAGAC > NZ_CP025268/1204480‑1204777
|
AAGTTTTCCGCAGCCAAAATCAAGGGCGTGGCCATTTTTCTCAATGCTTCTAATATACTCGCAAAGATATCTAGAGGGCATCGTATGAGGTTTTGCTGCATTCTCTGAGCGAATATTAACTCCGTGCATATTATAGTTCAAAGCAAGTGCC < SRR14920167.1632554/151‑1 (MQ=60)
AAGTTTTCCGCAGCCAAAATCAAGGGCGTGGCCATTTTTCTCAATGCTTCTAATATACTCGCAAAGATATCTAGAGGGCATCGTATGAGGTTTTGCTGCATTCTCTGAGCGAATATTAACTCCGTGCATATTATAGTTCAAAGCAAGTGCC < SRR14920167.523656/151‑1 (MQ=60)
GCCAAAATCAAGGGCGTGGCCATTTTTCTCAATGCTTCTAATGTACTCGCAAAGATATCTAGAGGGCATCGTATGAGGTTTTGCTGCATTCTCTGAGCGAATATTAACTCCGTGCATATTATAGTTCAAAGCAAGTGCCATTCAATTAATG < SRR14920167.2961219/151‑1 (MQ=60)
ATCAAGGGCGTGGCCATTTTTCTCAATGCTTCTAATATACTCGCAAAGATATCTAGAGAGCATCGTATGAGGTTTTGCTGCATTCTCTGAGCGAATATTAACTCCGTGCATATTATAGTTCAAAGCAACTGCCATTCAATTAATGTTATTT < SRR14920167.4652108/151‑1 (MQ=60)
CATTTTTCTCAATGCTTCTAATATACTCGCAAAGATATCTAGAGGGCATCGTATGAGGTTTTGCTGCATTCTCTGAGCGAATATTAACTCCGTGCATATTATAGTTCAAAGCAAGTGCCATTCAATTAATGTTATTTTTAGTGAAAAATTC < SRR14920167.4679326/151‑1 (MQ=60)
CTTCTAATATACTCGCAAAGATATCTAGAGGGCATCGTATGAGGTTTTGCTGCATTCTCTGAGCGAATATTAACTCCGTGCATGTTATAGTTCAAAGCAAGTGCCATTCAATTAATGTTATTTTTAGTGAAAAATTCTTTTATTTTATCGT > SRR14920167.2177395/1‑151 (MQ=60)
TCGCAAAGATATCTAGAGGGCATCGTATGAGGTTTTGCTGCATTCTCTGAGCGAATATTAACTCCGTGCATATTATAGTTCAAAGCAAGTGCCATTCAATTAATGTTATTTTTAGTGAAAAATTCTTTTATTTTATCGTCCGGGATTTTTC < SRR14920167.3252574/151‑1 (MQ=60)
GATATCTAGAGGGCATCGTATGAGGTTTTGCTGCATTCTCTGAGCGAATATTAACTCCGTGCATATTATAGTTCAAAGCAAGTGCCATTCAATTAATGTTATTTctgtctcttatacacatctccgagcccacgagactacgctgcatctc > SRR14920167.908487/1‑104 (MQ=60)
GATATCTAGAGGGCATCGTATGAGGTTTTGCTGCATTCTCTGAGCGAATATTAACTCCGTGCATATTATAGTTCAAAGCAAGTACCATTCAATTAATGTTATTTTTAGTGAAAAATTCTTTTATTTTATCGTCCGGGATTTTTCCGACTTG > SRR14920167.481889/1‑151 (MQ=60)
GATATCGAGAGGGCATCGTATGAGGTTTTGCTGCATTCTCTGAGCGAATATTAACTCCGTGCATATTATAGTTCAAAGCAAGTGCCATTCAATTAATGTTATTTTTAGTGAAAAATTCTTTTATTTTATCGTCCGGGATTTTTCCGACTTG > SRR14920167.3930552/1‑151 (MQ=60)
ATCTAGAGGGCATCGTATGAGGTTTTGCTGCATTCTCTGAGCGAATATTAACTCCGTGCATATTATAGTTCAAAGCAAGTGCCATTCAATTAATGTTATTTTTAGTGAAAAATTCTTTTATTTTATCGTCCGGGATTTTTCCGACTTGACT > SRR14920167.4061930/1‑151 (MQ=60)
GGCATCGTATGAGGTTTTGCTGCATTCTCTGAGCGAATATTAACTCCGTGCATATTATAGTTCAAAGCAAGTGCCATTCAATTAATGTTATTTTTAGTGAAAAATTCTTTTATTTTATCGTCCGGGATTTTTCCGACTTGACTTTCAGTTC < SRR14920167.2367737/151‑1 (MQ=60)
TCGTATGAGGTTTTGCTGCATTCTCTGAGCGAATATTAACTCCGTGCATATTATAGTTCAAAGCAAGTGCCATTCAATTAATGTTATTTTTAGTGAAAAATTCTTTTATTTTATCGTCCGGGATTTTTCCGACTTGACTTTCAGTTCTGGG > SRR14920167.5286195/1‑151 (MQ=60)
tgtgtataagagacagGCATTCTCTGAGCGAATATTAACTCCGTGCATATTATAGTTCAAAGCAAGTGCCATTCAATTAATGTTATTTTTAGTGAAAAATTCTTTTATTTTATCGTCCGGGATTTTTCCGACTTGACTTTCAGTTCTGGGC < SRR14920167.1657721/135‑1 (MQ=60)
tgtgtataagagacagGCATTCTCTGAGCGAATATTAACTCCGTGCATATTATAGTTCAAAGCAAGTGCCATTCAATTAATGTTATTTTTAGTGAAAAATTCTTTTATTTTATCGTCCGGGATTTTTCCGACTTGACTTTCAGTTCTGGGC < SRR14920167.1657775/135‑1 (MQ=60)
AGGTTTTGCTGCATTCTCTGAGCGAATATTAACTCCGTGCATATTATAGTTCAAAGCAAGTGCCATTCAATTAATGTTATTTTTAGTGAAAAATTCTTTTATTTTATCGTCCGGGATTTTTCCGACTTGACTTTCAGTTCTGGGCTTAACT < SRR14920167.5472192/151‑1 (MQ=60)
TGCTGCATTCTCTGAGCGAATATTAACTCCGTGCATATTATAGTTCAAAGCAAGTGCCATTCAATTAATGTTATTTTTAGTGACAAATTCTTTTATTTTATCGTCCGGGATTTTTCCGACTTGACTTTCAGTTCTGGGCTTAACTGTCAAA < SRR14920167.4350015/151‑1 (MQ=60)
GCATTCTCTGAGCGAATATTAACTCCGTGCATATTATAGTTCAAAGCAAGTGCCATTCAATTAATGTTATTTTTAGTGAAAAATTCTTTTATTTTATCGTCCGGGATTTTTCCGACTTGACTTTCAGTTCTGGGCTTAACTGTCAAAGCAA > SRR14920167.4013143/1‑151 (MQ=60)
GCATTCTCTGAGCGAATATTAACTCCGTGCATATTATAGTTCAAAGCAAGTGCCATTCAATTAATGTTATTTTTAGTGAAAAATTCTTTTATTTTATCGTCCGGGATTTTTCCGACTTGACTTTCAGTTCTGGGCTTAACTGTCAAAGCAA < SRR14920167.1487582/151‑1 (MQ=60)
CTCTGAGCGAATATTAACTCCGTGCATATTATAGTTCAAAGCAAGTGCCATTCAATTAATGTTATTTTTAGTGAAAAATTCTTTTATTTTATCGTCCGGGATTTTTCCGACTTGACTTTCAGTTCTGGGCTTAACTGTCAAAGCAAAGATA > SRR14920167.930513/1‑151 (MQ=60)
GAGCGAATATTAACTCCGTGCATATTATAGTTCAAAGCAAGTGCCATTCAATTAATGTTATTTTTAGTGAAAAATTCTTTTATTTTATCGTCCGGGATTTTTCCGACTTGACTTTCAGTTCTGGGCTTAACTGTCAAAGCAAAGATAATAC < SRR14920167.3031807/151‑1 (MQ=60)
GAGCGAATATTAACTCCGTGCATATTATAGTTCAAAGCAAGTGCCATTCAATTAATGTTATTTTTAGTGAAAAATTCTTTTATTTTATCGTCCGGGATTTTTCCGACTTGACTTTCAGTTCTGGGCTTAACTGTCAAAGCAAAGATAATAC < SRR14920167.5463493/151‑1 (MQ=60)
AGCGAATATTAACTCCGTGCATATTATAGTTCAAAGCAAGTGCCATTCAATTAATGTTATTTTTAGTGAAAAATTCTTTTATTTTATCGTCCGGGATTTTTCCGACTTGACTTTCAGTTCTGGGCTTAACTGTCAAAGCAAAGATAATACC < SRR14920167.961086/151‑1 (MQ=60)
TATTAACTCCGTGCATATTATAGTTCAAAGCAAGTGCCATTCAATTAATGTTATTTTTAGTGAAAAATTCTTTTATTTTATCGTCCGGGATTTTTCCGACTTGACTTTCAGTTCTGGGCTTAACTGTCAAAGCAAAGATAATACCACTCAC > SRR14920167.3943948/1‑151 (MQ=60)
TATTAACTCCGTGCATATTATAGTTCAAAGCAAGTGCCATTCAATTAATGTTATTTTTAGTGAAAAATTCTTTTATTTTATCGTCCGGGATTTTTCCGACTTGACTTTCAGTTCTGGGCTTAACTGTCAAAGCAAAGATAATACCACTCAC > SRR14920167.5141716/1‑151 (MQ=60)
TATTAACTCCGTGCATATTATAGTTCAAAGCAAGTGCCATTCAATTAATGTTATTTTTAGTGAAAAATTCTTTTATTTTATCGTCCGGGATTTTTCCGACTTGACTTTCAGTTCTGGGCTTAACTGTCAAAGCAAAGATAATACCACTCAC > SRR14920167.2754710/1‑151 (MQ=60)
TATTAACTCCGTGCATATTATAGTTCAAAGCAAGTGCCATTCAATTAATGTTATTTTTAGTGAAAAATTCTTTTATTTTATCGTCCGGGATTTTTCCGACTTGACTTTCAGTTCTGGGCTTAACTGTCAAAGCAAAGATAATACCACTCAC > SRR14920167.2754668/1‑151 (MQ=60)
TATTAACTCCGTGCATATTATAGTTCAAAGCAAGTGCCATTCAATTAATGTTATTTTTAGTGAAAAATTCTTTTATTTTATCGTCCGGGATTTTTCCGACTTGACTTTCAGTTCTGGGCTTAACTGTCAAAGCAAAGATAATACCACTCAC > SRR14920167.2092459/1‑151 (MQ=60)
TATTAACTCCGTGCATATTATAGTTCAAAGCAAGTGCCATTCAATTAATGTTATTTTTAGTGAAAAATTCTTTTATTTTATCGTCCGGGATTTTTCCGACTTGACTTTCAGTTCTGGGCTTAACTGTCAAAGCAAAGATAATACCACTCAC > SRR14920167.940674/1‑151 (MQ=60)
tgtgtataagagacagGTTCAAAGCAAGTGCCATTCAATTAATGTTATTTTTAGTGAAAAATTCTTTTATTTTATCGTCCGGGATTTTTCCGACTTGACTTTCAGTTCTGGGCTTAACTGTCAAAGCAAAGATAATACCACTCACTGAGAA < SRR14920167.2359338/135‑1 (MQ=60)
GTGCATATTATAGTTCAAAGCAAGTGCCATTCAATTAATGTTATTTTTAGTGAAAAATTCTTTTATTTTATCGTCCGGGATTTTTCCGACTTGACTTTCAGTTCTGGACTTAACTGTCAAAGCAATGATAATACCACTCACTGAGAATGAT > SRR14920167.5107238/1‑151 (MQ=60)
GCATATTATAGTTCAAAGCAAGTGCCATTCAATTAATGTTATTTTTAGTGAAAAATTCTTTTATTTTATCGTCCGGGATTTTTCCGACTTGACTTTCAGTTCTGGGCTTAACTGTCAAAGCAAAGATAATACCACTCACTGAGAATGATAA < SRR14920167.5456681/151‑1 (MQ=60)
GAATATTATAGTTCAAAGCAAGTGCCATTCAATTAATGTTATTTTTAGTGAAAAATTCTTTTCTTTTATCGTCCGGGATTTTTCCGACTTGACTTTCAGTTCTGGGCTTAACTGTCAAAGCAAAGATCATACCACTCACTGAGAATGATAA < SRR14920167.3460083/151‑1 (MQ=60)
TATTATAGTTCAAAGCAAGTGCCATTCAATTAATGTTATTTTTAGTGAAAAATTCTTTTATTTTATCGTCCGGGATTTTTCCGACTTGACTTTCAGTTCTGGGCTTAACTGTCAAAGCAAAGATAATACCACTCACTGAGAATGATAAAAT < SRR14920167.3850603/151‑1 (MQ=60)
TGCCATTCAATTAATGTTATTTTTAGTGAAAAATTCTTTTATTTTATCGTCCGGGATTTTTCCGACTTGACTTTCAGTTCTGGGCTTAACTGTCAAAGCAAAGATAATACCACTCACTGAGAATGATAAAATTACAAAAAAGAATAAAGAC < SRR14920167.1306640/151‑1 (MQ=60)
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AAGTTTTCCGCAGCCAAAATCAAGGGCGTGGCCATTTTTCTCAATGCTTCTAATATACTCGCAAAGATATCTAGAGGGCATCGTATGAGGTTTTGCTGCATTCTCTGAGCGAATATTAACTCCGTGCATATTATAGTTCAAAGCAAGTACCATTCAATTAATGTTATTTTTAGTGAAAAATTCTTTTATTTTATCGTCCGGGATTTTTCCGACTTGACTTTCAGTTCTGGGCTTAACTGTCAAAGCAAAGATAATACCACTCACTGAGAATGATAAAATTACAAAAAAGAATAAAGAC > NZ_CP025268/1204480‑1204777
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
