Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A2 F1 I1 R1	259	502.6	21734322	99.3%	21582181	151.0

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
JC	NC_008463	2,936,185	Δ120 bp	intergenic (‑529/+1172)	cas1f ← / ← PA14_RS13605	type I‑F CRISPR‑associated endonuclease Cas1f/hypothetical protein

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_008463	= 2936184	5 (0.010)	300 (0.750)	161/242	0.8	99.2%	noncoding (268/1289 nt)	CRISPR	repeat region
*	?	NC_008463	2936305 =	1 (0.000)	300 (0.750)	161/242	0.8	99.2%	noncoding (389/1289 nt)	CRISPR	repeat region

Only 100 of 428 total aligned reads displayed.

AGGTAGACGCGGACATCAAGCCCGCCGTGAATTTCTTAGCTGCCTACACGGCAGTGAACGAGAGCCGCAGGGAGCGGGGCCGCAAACTCCTTTTCTTAGCTGCCTACACGGCAGTGAACTGGAGGCGACCGAACCCGGGCTGTTCGAGGATTTTCTTAGCTGCCTACACGGCAGTGAAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_008463/2936006‑2936184

‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttttcttagctgcctacacggcagtgaacTTATCAAGCGGCTGTGCTGGGCCTGTTTCGTTTTTCTTAGCTGCCTACACGGCAGTGAACGCCTTCGGTGGTGATCTTTCCGTTGTTTGCCTTTTCTTAGCTGCCTACACGGCAGTGAACAATCGTGCTCGAGATACCAGCCATCCGCGC  >  NC_008463/2936305‑2936454

AGGTAGACGCGGACATCAAGCCCGCCGTGAATTTCTTAGCTGCCTACACGGCAGTGAACGATAGCCGCAGGGAGCGGGGCCGCAAACTCCTTTTATTAGCTGCCTACACGGCAGTGAACTGGAGGCGACCGAACCCGGGCTGTTCGAGGAT                                                                                                                                                                                    >  2:6475779/1‑151

 GGTAGACGCGGACATCAAGCCCGCCGTGAATTTCTTAGCTGCCTACACGGCAGTGAACGAGAGCCGCAGGGAGCGGGGCCGCAAACTCCTTTTCTTAGCTGCCTACACGGCAGTGAACTGGAGGCGACCGAACCCGGGCTGTTCGAGGATT                                                                                                                                                                                   >  1:2223530/1‑151

  GTAGACGCGGACATCAAGCCCGCCGTGAATTTCTTAGCTGCCTACACGGCAGTGAACGAGAGCCGCAGGGAGCGGGGCCGCAAACTCCTTTTCTTAGCTGCGAACACGGCAGTGAACTGGAGGCGACCGAACCCGGGCTGTACGAGGATTT                                                                                                                                                                                  >  1:3275811/1‑151

  GTAGACGCGGACATCAAGCCCGCCGTGAATTTCTTAGCTGCCTACACGGCAGTGAACGAGAGCCGCAGGGAGCGGGGCCGCAAACTCCTTTTCTTAGCTGCCTACACGGCAGTGAACTGGAGGCGACCGAACCCGGGCTGTTCGAGGATTT                                                                                                                                                                                  >  2:9624425/1‑151

    AGACGCGGACATCAAGCCCGCCGTGAATTTCTGAGCTGCCTACACGGCAGTGAACGAGAGCCGCAGGGAGCGGGGCCGCAAACTCCTTTTCTTAGCTGCCTACACGGCAGTGAACTGGAGGCGACCGAACCCGGGCTGTTCGAGGATTTTC                                                                                                                                                                                <  2:8456569/151‑1

          GGACATCAAGCCCGCCGTGAATTTCTTAGCTGCCTACACGGCAGTGAACGAGAGCCGCAGGGAGCGGGGCCGCAAACTCCTTTTCTTAGCTGCCTACACGGCAGTGAACTGGAGGCGACCGAACCCGGGCTGTTCGAGGATTTTCTTAGCT                                                                                                                                                                          <  1:2952962/151‑1

           GACATCAAGCCCGCCGTGAATTTCTTAGCTGCCTACACGGCAGTGAACGAGAGCCGCAGGGAGCGGGGCCGCAAACTCCTTTTCTTAGCTGCCTACACGGCAGTGAACTGGAGGCGACCGCACCCGGGCTGTACGAGGATTTTCTTAGCTG                                                                                                                                                                         >  2:10152156/1‑151

           GACATCAAGCCCGCCGTGAATTTCTTAGCTGCCTACACGGCAGTGAACGAGAGCCGCAGGGAGCGGGGCCGCAAACTCCTTTTCTTAGCTGCCTACACGGCAGTGAACTGGAGGCGACCGAACCCGGGCTGTTCGAGGATTTTCTTAGCTG                                                                                                                                                                         <  2:7228739/151‑1

              ATCAAGCCCGCCGTGAATTTCTTAGCTGCCTACACGGCAGTGAACGAGAGCCGCAGGGAGCGGGGCCGCAAACTCCTTTTCTTAGCTGCCTACACGGCAGTGAACTGGAGGCGACCGAACCCGGGCTGTTCGAGGATTTTCTTAGCTGCCT                                                                                                                                                                      >  1:7308917/1‑151

                     CCGCCGTGAATTTCTTAGCTGCCTACACGGCAGTGAACGAGAGCCGCAGGGAGCGGGGCCGCAAACTACTTTTATTAGCAGCCTACACGGCAGTGAACTGGAGGCGACCGAACCCGGGCGGGTCGATGATTTTCTTAGCTGCCTACACGGC                                                                                                                                                               >  2:9776620/1‑151

                      CGCCGTGAATTTCTTAGCTGCCTACACGGCAGTGAACGAGAGCCGCAGGGAGCGGGGCCGCAAACTCCTTTTCTTAGCTGCCTACACGGCAGTGAACTGGAGGCGACCGAACCCGGGCTGTTCGAGGATTTTCTTAGCTGCCTACACGGCA                                                                                                                                                              >  2:5187491/1‑151

                      CGCCGTGAATTTCTTAGCTGCCTACACGGCAGTGAACGAGAGCCGCAGGGAGCGGGGCCGCAAACTCCTTTTCTTAGCTGCCTACACGGCAGTGAACTGGAGGCGACCGAACCCGGGCTGTTCGAGGATTTTCTTAGCTGCCTACACGGCA                                                                                                                                                              >  2:1458006/1‑151

                         CGTGAATTTCTTAGCTGCCTACACGGCAGTGAACGAGAGCCGCAGGGAGCGGGGCCGCAAACTCCTTTTCTTAGCTGCCTACACGGCAGTGAACTGGAGGCGACCGAACCCGGGCTGTTCGAGGATTTTCTTAGCTGCCTACACGGCAGTG                                                                                                                                                           >  2:3539344/1‑151

                              ATTTCTTAGCTGCCTACACGGCAGTGAACGAGAGCCGCAGGGAGCGGGGCCGCAAACTCCTTTTCTTAGCTGCCTACACGGCAGTGAACTGGAGGCGACCGAACCCGGGCTGTTCGAGGATTTTCTTAGCTGCCTACACGGCAGTGAACTT                                                                                                                                                      >  1:7768927/1‑151

                                TTCTTAGCTGCCTACACGGCAGTGAACGAGAGCCGCAGGGAGCGGGGCCGCAAACTCCTTTTCTTAGCTGCCTACACGGCAGTGAACTGGAGGCGTCCGAACCCGGGCTGTTCGAGGATTTTCTTAGCTGCCTACACGGCAGTGAACTTAT                                                                                                                                                    <  1:5026996/151‑1

                                   TTAGCTGCCTACACGGCAGTGAACGAGAGCCGCAGGGAGCGGGGCCGCAAACTCCTTTTCTTAGCTGCCTACACGGCAGTGAACTGGAGGCGACCGAACCCGGGCTGTTCGAGGATTTTCTTAGCTGCCTACACGGCAGTGAACTTATCAA                                                                                                                                                 >  1:10292511/1‑151

                                    TAGCTGCCTACACGGCAGTGAACGAGAGCCGCAGGGAGCGGGGCCGCAAACTCCTTTTCTTAGCTGCCTACACGGCAGTGAACTGGAGGCGACCGAACCCGGGCTGTTCGAGGATTTTCTTAGCTGCCTACACGGCAGTGAACTTATCAAG                                                                                                                                                <  1:2113785/151‑1

                                           CTACACGGCAGTGAACGAGAGCCGCAGGGAGCGGGGCCGCAAACTCCTTTTCTTAGCTGCCTACACGGCAGTGAACTGGAGGCGACCGAACCCGGGCTGTTCGAGGATTTTCTTAGCTGCCTACACGGCAGTGAACTTATCAAGCGGCTGT                                                                                                                                         <  2:5037587/151‑1

                                           CTACACGGCAGTGAACGAGAGCCGCAGGGAGCGGGGCCGCAAACTCCTTTTCTTAGCTGCCTACACGGCAGTGAACTGGAGGCGACCGAACCCGGGCTGTTCGAGGATTTTCTTAGCTGCCTACACGGCAGTGAACTTATCAAGCGGCTGT                                                                                                                                         >  2:4392455/1‑151

                                             ACACGGCAGTGAACGAGAGCCGCAGGGAGCGGGGCCGCAAACTCCTTTTCTTAGCTGCCTACACGGCAGTGAACTGGAGGCGACCGAACCCGGGCTGTTCGAGGATTTTCTTAGCTGCCTACACGGCAGTGAACTTATCAAGCGGCTGTGg                                                                                                                                       >  2:4535524/1‑150

                                               ACGGCAGTGAACGAGAGCCGCAGGGAGCGGGGCCGCAAACTCCTTTTCTTAGCTGCCTACACGGCAGTGAACTGGAGGCGACCGAACCCGGGCTGTTCGAGGATTTTCTTAGCTGCCTACACGGCAGTGAACTTATCAAGCGGCTGTGCTG                                                                                                                                     <  2:8182714/151‑1

                                               ACGGCAGTGAACGAGAGCCGCAGGGAGCGGGGCCGCAAACTCCTTTTCTTAGCTGCCTACACGGCAGTGAACTGGAGGCGACCGAACCCGGGCTGTTCGAGGATTTTCTTAGCTGCCTACACGGCAGTGAACTTATCAAGCGGCTGTGCTG                                                                                                                                     <  1:8008323/151‑1

                                                  GCAGTGAACGAGAGCCGCAGGGAGCGGGGCCGCAAACTCCTTTTCTTAGCTGCCTACACGGCAGTGAACTGGAGGCGACCGAACCCGGGCTGTTCGAGGATTTTCTTAGCTGCCTACACGGCAGTGAACTTATCAAGCGGCTGTGCTGGGC                                                                                                                                  >  1:10049097/1‑151

                                                  GCAGTGAACGAGAGCCGCAGGGAGCGGGGCCGCAAACTCCTTTTCTTAGCTGCCTACACGGCAGTGAACAGGAGGCGACCGCACCCGGGCTGGTCGAGGAGTTTCTTAGCTGCCTACACGGCAGTGAACTTATCTAGCGGCTGTGCTGGGC                                                                                                                                  >  2:1913337/1‑151

                                                   CAGTGAACGAGAGCCGCAGGGAGCGGGGCCGCAAACTCCTTTTCTTAGCTGCCTACACGGCAGTGAACTGGAGGCGACCGAACCCGGGCTGTTCGAGGATTTTCTTAGCTGCCTACACGGCAGTGAACTTATCAAGCGGCTGTGCTGGGCC                                                                                                                                 <  1:10502278/151‑1

                                                   CAGTGAACGAGAGCCGCAGGGAGCGGGGCCGCAAACTCCTTTTCTTAGCTGCCTACACGGCAGTGAACTGGAGGCGACCGAACCCGGGCTGTTCGAGGATTTTCTTAGCTGCCTACACGGCAGTGAACTTATCAAGCGGCTGTGCTGGGCC                                                                                                                                 <  1:3031169/151‑1

                                                       GAACGAGAGCCGCAGGGAGCGGGGCCGCAAACTCCTTTTCTTAGCTGCCTACACGGCAGTGAACTGGAGGCGACCGAACCCGGGCTGTTCGAGGATTTTCTTAGCTGCCTACACGGCAGTGAACTTATCAAGCGGCTGTGCTGGGCCGGTT                                                                                                                             >  1:6948421/1‑151

                                                           GAGAGCCGCAGGGAGCGGGGCCGCATACTCCTTTTCTTAGCTGCCTACACGGCAGTGAACTGGAGGCGACCGAACCCGGGCTGTTCGAGGATTTTCTTAGCTGCCTACACGGCAGTGAACTTATCAAGCGGCTGTGCTGGGCCTGTTTCGT                                                                                                                         <  2:8069513/151‑1

                                                                CCGCAGGGAGCGGGGCCGCAAACTCCTTTTCTTAGCTGCCTACACGGCAGTGAACTGGAGGCGACCGAACCCGGGCTGTTCGAGGATTTTCTTAGCTGCCTACACGGCAGTGAACTTATCAAGCGGCTGTGCTGGGCCTGTTTCGTTTTTC                                                                                                                    <  1:7079499/151‑1

                                                                 CGCAGGGAGCGGGGCCGCAAACTCCTTTTCTTAGCTGCCTACACGGCAGTGAACTGGAGGCGACCGAACCCGGGCTGTTCGAGGATTTTCTTAGCTGCCTACACGGCAGTGAACTTATCAAGCGGCTGTGCTGGGCCTGTTTCGTTTTTCT                                                                                                                   <  1:4946741/151‑1

                                                                     GGGAGCGGGGCCGCAAACTCCTTTTCTTAGCTGCCTACACGGCAGTGAACTGGAGGCGACCGAACCCGGGCTGTTCGAGGATTTTCTTAGCTGCCTACACGGCAGTGAACTTATCAAGCGGCTGTGCTGGGCCTGTTTCGTTTTTCTTAGC                                                                                                               <  1:5826214/151‑1

                                                                        AGCGGGGCCGCAAACTCCTTTTCTTCGCTGCCTACACGGCAGTGAACTGGAGGCGACCGAACCCGGGCTGTTCGAGGATTTTCTTAGCTGCCTACACGGCAGTGAACTTATCAAGCGGCTGTGCTGGGCCTGTTTCGTTTTTCTTAGCTGC                                                                                                            <  2:2937816/151‑1

                                                                        AGCGGGGCCGCAAACTCCTTTTCTTAGCTGCCTACACGGCAGTGAACTGGAGGCGACCGAACCCGGGCTGTTCGAGGATTTTCTTAGCTGCCTACACGGCAGTGAACTTATCAAGCGCCGGTGCTGGGCCTGTTTCGTGTTTCTTAGCTGC                                                                                                            >  2:3170253/1‑151

                                                                          CGGGGCCGCAAACTCCTTTTCTTAGCTGCCTACACGGCAGTGAACTGGAGGCGACCGAACCCGGGCTGTTCGAGGATTTTCTTAGCTGCCTACACGGCAGTGAACTTATCAAGCGGCTGTGCTGGGCCTGTTTCGTTTTTCTTAGCTGCCT                                                                                                          <  1:10162425/151‑1

                                                                                CGCAAACTCCTTTTCTTAGCTGCCTACACGGCAGTGAACTGGAGGCGACCGAACCCGGGCTGTTCGAGGATTTTCTTAGCTGCCTACACGGCAGTGAACTTATCAAGCGGCTGTGCTGGGCCTGTTTCGTTTTTCTTAGCTGCCTACACGG                                                                                                    <  1:404465/151‑1

                                                                                 GCACACTCCTTTTCTTAGCTGCCTACACGGCAGTGAACTGGAGGCGACCGAACCCGGGCTTTTCGAGGATTTTCTTAGCTGCCTACACGGCAGTGAACTTATCAAGCGGCTGTGCTGGGCCTGTTTCGTTTTTCTTAGCTGCCTACACGGC                                                                                                   <  2:10498486/151‑1

                                                                                   AAACTCCTTTTCTTAGCTGCCTACACGGCAGTGAACTGGAGGCGACCGACCCCGGGCTGTTCGAGGATTTTCTTAGCTGCCTACACGGCAGTGAACTGATAAAGCGGCTGTGATGGGCGTGTTTGGTTTTTCTTAGCTGCCTACACGGCAG                                                                                                 >  2:1059075/1‑151

                                                                                    AACTCCTTTTCTTAGCTGCCTACACGGCAGTGAACTGGAGGCGACCGAACCCGGGCTGTTCGAGGATTTTCTTAGCTGCCTACACGGCAGTGAACTTATCAAGCGGCTGTGCTGGGCCTGTTTCGTTTTTCTTAGCTGCCTACACGGCAGT                                                                                                <  1:9163646/151‑1

                                                                                    AACTCCTTTTCTTAGCTGCCTACACGGCAGTGAACTGGAGGCGACCGAACCCGGGCTGTTCGAGGATTTTCTTAGCTGCCTACACGGCAGTGAACTTATCAAGCGGCTGTGCTGGGCCTGTTTCGTTTTTCTTAGCTGCCTACACGGCAGT                                                                                                <  1:3429157/151‑1

                                                                                     ACTCCTTTTCTTAGCTGCCTACACGGCAGTGAACTGGAGGCGACCGAACCCGGGCTGTTCGAGGATTTTCTTAGCTGCCTACACGGCAGTGAACTTATCAAGCGGCTGTGCTGGGCCTGTTTCGTTTTTCTTAGCTGCCTACACGGCAGTG                                                                                               >  2:6206780/1‑151

                                                                                        CCTTTTCTTAGCTGCCTACACGGCAGTGAACTGGAGGCGTCCGAACCCGGGCTGTTCGAGGATTTTCTTAGCTGCCGACACGGCAGTGTACTTATCAAGCGGCTGTGCTGGGCCTGTTTCGTTTTTCTTAGCTGCCTACACGGCAGTGAAC                                                                                            <  2:2484054/151‑1

                                                                                        CCTTTTCTTAGCTGCCTACACGGCAGTGAACTGGAGGCGACCGAACCCGGGCTGTTCGAGGATTTTCTTAGCTGCCTACACGGCAGTGAACTTATCAAGCGGCTGTGCTGGGCCTGTTTCGTTTTTCTTAGCTGCCTACACGGCAGTGAAC                                                                                            <  1:2585392/151‑1

                                                                                         caTTTCTTAGCTGCCTACCCGGCAGTGAACTGGAGGCGAGAGTACCCGGGCTGTTCGAGGATTTTCTTAGCTGCCTACACGGCAGTGAACTTATCAAGCGGCTGTGCTGGGCCTGTTTCGTTTTTCTTAGCTGCCTACACGGCAGTGAACG                                                                                           <  2:5951735/149‑1

                                                                                          TTTTCTTAGCTGCCTACACGGCAGTGAACTGGAGGCGACCGAACCCGGGCTGTTCGAGGATTTTCTTAGCTGCCTACACGGCAGTGAACTTATCAAGCGGCTGTGCTGGGCCTGTTTCGTTTTTCTTAGCTGCCTACACGGCAGTGAACGC                                                                                          >  1:8237067/1‑151

                                                                                           TTTCTTAGCTGCCTACACGGCAGTGAACTGGAGGCGACCGAACCCGGGCTGTTCGAGGATTTTCTTAGCTGCCTACACGGCAGTGAACTTATCAAGCGGCTGTGCTGGGCCTGTTTCGTTTTTCTTAGCTGCCTACACGGCAGTGAACGCC                                                                                         <  1:6808502/151‑1

                                                                                              CTTAGCTGCCTACACGGCAGTGAACTGGAGGCGACCGAACCCGGGCTGTTCGAGGATTTTCTTAGCTGCCTACCCGGCAGTGAACTTATCAAGCGGCTGTGCTGGGCCTGTTTCGTTTTTCTTAGCTGCCTACACGGCAGTGAACGCCTTC                                                                                      <  1:1489336/151‑1

                                                                                                 AGCTGCCTACACGGCAGTGAACTGGAGGCGACCGAACCCGGGCTGTTCGAGGATTTTCTTAGCTGCCTACACGGCAGTGAACTTATCAAGCGGCTGTGCTGGGCCTGTTTCGTTTTTCTTAGCTGCCTACACGGCAGTGAACGCCTTCGGT                                                                                   <  2:4094375/151‑1

                                                                                                      CCTACACGGCAGTGAACTGGAGGCGACCGAACCCGGGCTGTTCGAGGATTTTCTTAGCTGCCTACACGGCAGTGAACTTATCAAGCGGCTGTGCTGGGCCTGTTTCGTTTTTCTTAGCTGCCTACACGGCAGTGAACGCCTTCGGTGGTGA                                                                              <  1:6500284/151‑1

                                                                                                        TACACGGCAGTGAACTGGAGGCGACCGAACCCGGGCTGTTCGAGGATTTTCTTAGCTGCCTACACGGCAGTGAACTTATCAAGCGGCTGTGCTGGGCCTGTTTCGTTTTTCTTAGCTGCCTACACGGCAGTGAACGCCTTCGGTGGTGATC                                                                            <  1:4477671/151‑1

                                                                                                         ACACGGCAGTGAACTGGAGGCGACCGAACCCGGGCTGTTCGAGGATTTTCTTAGCTGCCTACACGGCAGTGAACTTATCAAGCGGCTGTGCTGGGCCTGTTTCGTTTTTCTTAGCTGCCTACACGGCAGTGAACGCCTTCGGTGGTGATCT                                                                           <  1:3693629/151‑1

                                                                                                          CACGGCAGTGAACTGGAGGCGACCGAACCCGGGCTGTTCGAGGATTTTCTTAGCTGCCTACACGGCAGTGAACTTATCAAGCGGCTGTGCTGGGCCTGTTTCGTTTTTCTTAGCTGCCTACACGGCAGTGAACGCCTTCGGTGGTGATCTT                                                                          <  2:6614730/151‑1

                                                                                                           ACGGCAGTGAACTGGAGGCGACCGAACCCGGGCTGTTCGAGGATTTTCTTAGCTGCCTACACGGCAGTGAACTTATCAAGCGGCTGTGCTGGGCCTGTTTCGTTTTTCTTAGCTGCCTACACGGCAGTGAACGCCTTCGGTGGTGATCTTT                                                                         >  2:3813062/1‑151

                                                                                                           ACGGCAGTGAACTGGAGGCGACCGAACCCGGGCTGTTCGAGGATTTTCTTAGCTGCCTACACGGCAGTGAACTTATCAAGCGGCTGTGCTGGGCCTGTTTCGTTTTTCTTAGCTGCCTACACGGCAGTGAACGCCTTCGGTGGTGATCTTT                                                                         >  1:9392503/1‑151

                                                                                                           ACGGCAGTGAACTGGAGGCGACCGAACCCGGGCTGTTCGAGGATTTTCTTAGCTGCCTACACGGCAGTGAACATATCAAGCGGCTGTGCTGGGCCTGTTTCGTTTTTCTTAGCTGCCTACACGGCAGTGAACGCCTTCGGTGGGGAGCTgt                                                                         >  1:9590616/1‑149

                                                                                                             GGCAGTGAACTGGAGGCGACCGAACCCGGGCTGTTCGAGGATTTTCTTAGCTGCCTACACGGCAGTGAACTTATCAAGCGGCTGTGCTGGGCCTGTTTCGTTTTTCTTAGCTGCCTACACGGCAGTGAACGCCTTCGGTGGTGATCTTTCC                                                                       >  2:9173330/1‑151

                                                                                                               CAGTGAACTGGAGGCGACCGAACCCGGGCTGTTCGAGGATTTTCTTAGCTGCCTACACGGCAGTGAACTTATCAAGCGGCTGTGCTGGGCCTGTTTCGTTTTTCTTAGCTGCCTACACGGCAGTGAACGCCTTCGGTGGTGATCTTTCCGT                                                                     <  1:2726568/151‑1

                                                                                                               CAGGGAACTGGAGGCGACCGAACCCGGGCTGTTCGAGGATTTTCTTAGCTGCCTACACGGCAGTGAACTTATCAAGCGGCTGTGCTGGGCCTGTTTCGTTTTTCTTAGCTGCCTACACGGCAGTGAACGCCTTCGGTGGTGATCTTTCCGT                                                                     <  2:4949546/151‑1

                                                                                                                AGTGAACTGGAGGCGACCGAACCCGGGCTGTTCGAGGATTTTCTTAGCTGCCTACACGGCAGTGAACTTCTCAAGCGGCTGTGCTGGGCCTGTTTCGTTTTTCTTAGCTGCCTACACGGCAGTGAACGCCTTCGGTGGTGATCTTTCCGTT                                                                    <  2:9875455/151‑1

                                                                                                                     ACTGGAGGCGACCGAACCCGGGCTGTTCGAGGATTTTCTTAGCTGCCTACACGGCAGTGAACTTATCAAGCGGCTGTGCTGGGCCTGTTTCGTTTTTCTTAGCTGCCTACACGGCAGTGAACGCCTTCGGTGGTGATCTTTCCGTTGTTTG                                                               <  1:6876048/151‑1

                                                                                                                       TGGAGGCGACCGAACCCGGGCTGTTCGAGGATTTTCTTAGCTGCCTACACGGCAGTGAACTTATCAAGCGGCTGTGCTGGGCCTGTTTCGTTTTTCTTAGCTGCCTACACGGCAGTGAACGCCTTCGGTGGTGATCTTTCCGTTGTTTGCC                                                             <  1:454954/151‑1

                                                                                                                       TGGAGGCGACCGAACCCGGGCTGTTCGAGGATTTTCTTAGCTGCCTACACGGCAGTGAACTTATCAAGCGGCTGTGCTGGGCCTGTTTCGTTTTTCTTAGCTGCCTACACGGCAGTGAACGCCTTCGGTGGTGATCTTTCCGTTGTTTGCC                                                             <  1:5855928/151‑1

                                                                                                                       TGGAGGCGACCGAACCCGGGCTGTTCGAGGATTTTCTTAGCTGCCTACACGGCAGTGAACTTATCAAGCGGCTGTGCTGGGCCTGTTTCGTTTTTCTTAGCTGCCTACACGGCAGTGAACGCCTTCGGTGGTGATCTTTCCGTTGTTTGCC                                                             >  1:9547977/1‑151

                                                                                                                         GAGGCGACCGAACCCGGGCTGTTCGAGGATTTTCTTAGCTGCCTACACGGCAGTGAACTTATCAAGCGGCTGTGCTGGGCCTGTTTCGTTTTTCTTAGCTGCCTACACGGCAGTGAACGCCTTCGGTGGTGATCTTTCCGTTGTTTGCCTT                                                           <  1:614930/151‑1

                                                                                                                         GAGGCGACCGAACCCGGGCTGTTCGAGGATTTTCTTAGCTGCCTACACGGCAGTGAACTTATCAAGCGGCTGTGCTGGGCCTGTTTCGTTTTTCTTAGCTGCCTACACGGCAGTGAACGCCTTCGGTGGTGATCTTTCCGTTGTTTGCCTT                                                           <  2:5379282/151‑1

                                                                                                                         GAGGCGACCGAACCCGGGCTGTTCGAGGATTTTCTTAGCTGCCTACACGGCAGTGAACTTATCAAGCGGCTGTGCTGGGCCTGTTTCGTTTTTCTTAGCTGCCTACACGGCAGTGAACGCCTTCGGTGGTGATCTTTCCGTTGTTTGCCTT                                                           <  1:7575685/151‑1

                                                                                                                          AGGCGACCGAACCCGGGCTGTTCGAGGATTTTCTTAGCTGCCTACACGGCAGTGAACTTATCAAGCGGCTGTGCTGGGCCTGTTTCGTTTTTCTTAGCTGCCTACACGGCAGTGAACGCCTTGGGTGGTGATCTTTCCTTTGTTTGCCTTg                                                          >  2:6275886/1‑150

                                                                                                                          AGGCGACCGAACCCGGGCTGTTCGAGGATTTTCTTAGCTGCCTACACGGCAGTGAACTTATCAAGCGGCTGTGCTGGGCCTGTTTCGTTTTTCTTAGCTGCCTACACGGCAGTGAACGCCTTCGGTGGTGATCTTTCCGTTGTTTGCCTTT                                                          <  2:8215551/151‑1

                                                                                                                          AGGCGACCGAACCCGGGCTGTTCGAGGATTTTCTTAGCTGCCTACACGGCAGTGAACTTATCAAGCGGCTGTGCTGGGCCTGTTTCGTTTTTCTTAGCTGCCTACACGGCAGTGAACGCCTTCGGTGGTGATCTTTCCGTTGTTTGCCTTT                                                          <  1:4212929/151‑1

                                                                                                                          AGGCGACCGAACCCGGGCTGTTCGAGGATTTTCTTAGCTGCCTACACGGCAGTGAACTTATCAAGCGGCTGTGCTGGGCCTGTTTCGTTTTTCTTAGCTGCCTACACGGCAGTGAACGCCTTCGGTGGTGATCTTTCCGTTGTTTGCCTTT                                                          <  1:8310395/151‑1

                                                                                                                           GGCGACCGAACCCGGGCTGTTCGAGGATTTTCTTAGCTGCCTACACGGCAGTGAACTTATCAAGCGGCTGTGCTGGGCCTGTTTCGTTTTTCTTAGCTGCCTACACGGCAGTGAACGCCTTCGGTGGTGATCTTTCCGTTGTTTGCCTTTT                                                         <  2:2195712/151‑1

                                                                                                                            GCGACCGAACCCGGGCTGTTCGAGGATTTTCTTAGCTGCCTACACGGCAGTGAACTTATCAAGCGGCTGTGCTGGGCCTGTTTCGTTTTTCTTAGCTGCCTACACGGCAGTGAACGCCTTCGGTGGTGATCTTTCCGTTGTTTGCCTTTTC                                                        <  2:7568992/151‑1

                                                                                                                               ACCGAACCCGGTCTGTTCGAGGATTTTCTTAGCTGCCTACACGGCAGTGAACTTATCAAGCGGCTGTGCTGGGCCTGTTTCGATTTTCTTAGCTGCCTACACGGCAGTGAACGCCTTCGGTGGTGATCTTTCCGTTGTTTGCCTTTTCTTA                                                     <  2:776335/151‑1

                                                                                                                                CCGAACCCGGGCTGTTCGAGGATTTTCTTAGCTGCCTACACGGCAGTGAACTTATCAAGCGGCTGTGCTGGGCCTGTTTCGTTTTTCTTAGCTGCCTACACGGCAGTGAACGCCTTCGGTGGTGATCTTTCCGTTGTTTGCCTTTTCTTAG                                                    <  2:3413080/151‑1

                                                                                                                                  GAACCCGGGCTGTTCGAGGATTTTCTTAGCTGCCTACACGGCAGTGAACTTATCAAGCGGCTGTGCTGGGCCTGTTTCGTTTTTCTTAGCTGCCTACACGGCAGTGAACGCCTTCGGTGGTGATCTTTCCGTTGTTTGCCTTTTCTTAGCT                                                  >  1:3344465/1‑151

                                                                                                                                    ACCCGGGCTGTTCGAGGATTTTCTTAGCTGCCTACACGGCAGTGAACTTCTCAACCGTCTGTGCTGGGCCTGTTTCGATTTTCTTAGCTGCCTACACGGCAGTGAACGCCTTCGGTGGTGATCTTTCCGTTGTTTGCCTTTTCTTAGCTGC                                                <  1:1311877/151‑1

                                                                                                                                    ACCCGGGCTGTTCGAGGATTTTCTTAGCTGCCTACACGGCAGTGAACTTATCAAGCGGCTGTGCTGGGCCTGTTTCGTTTTTCTTAGCTGCCTACACGGCAGTGAACGCCTTCGGTGGTGATCTTTCCGTTGTTTGCCTTTTCTTAGCTGC                                                >  1:9863858/1‑151

                                                                                                                                    ACCCGGGCTGTTCGAGGATTTTCTTAGCTGCCTACACGGCAGTGAACTTATCAAGCGGCTGTGCTGGGCCTGTTTCGTTTTTCTTAGCTGCCTACACGGCAGTGAACGCCTTCGGTGGTGATCTTTCCGTTGTTTGCCTTTTCTTAGCTGC                                                <  2:4726090/151‑1

                                                                                                                                         GGCTGTTCGAGGATTTTCTTAGCTGCCTACACGGCAGTGAACTTATCAAGCGGCTGTGCTGGGCCTGTTTCGTTTTTCTTAGCTGCCTACACGGCAGTGAACGCCTTCGGTGGTGATCTTTCCGTTGTTTGCCTTTTCTTAGCTGCCTACA                                           >  2:1217238/1‑151

                                                                                                                                            TGTTCGAGGATTTTCTTAGCTGCCTACACGGCAGTGAACTTATCAAGCGGCTGTGCTGGGCCTGTTTCGTTTTTCTTAGCTGCCTACACGGCAGTGAACGCCTTCGGTGGTGATCTTTCCGTTGTTTGCCTTTTCTTAGCTGCCTACACGG                                        >  1:5572665/1‑151

                                                                                                                                            TGTTCGAGGATTTTCTTAGCTGCCTACACGGCAGTGAACTTATCAAGCGGCTGTGCTGGGCCTGTTTCGTTTTTCTTAGCTGCCTACACGGCAGTGAACGCCTTCGGTGGTGATCTTTCCGTTGTTTGCCTTTTCTTAGCTGCCTACACGG                                        <  1:2408756/151‑1

                                                                                                                                              TTCGAGGATTTTCTTAGCTGCCTACACGGCAGTGAACTTATCAAGCGGCTGTGCTGGGCCTGTTTCGTTTTTCTTAGCTGCCTACACGGCAGTGAACGCCTTCCGTGGTGATCTTTCCGTTGTTTGCGTTTTCTTAGCTGCCTACACGGCA                                      >  1:7225506/1‑151

                                                                                                                                                CGAGGATTTTCTTAGCTGCCTACACGGCAGTGAACTTATCAAGCGGCTGTGCTGGGCCTGTTTCGTTTTTCTTAGCTGCCTACACGGCAGTGAACGCCTTCGGTGGTGATCTTTCCGTTGTTTGCCTTTTCTTAGCTGCCTACACGGCAGT                                    <  1:7612991/151‑1

                                                                                                                                                  AGGATTTTCTTAGCTGCCTACACGGCAGTGAACTTATCAAGCGGCTGTGCTGGGCCTGTTTCGTTTTTCTTAGCTGCCTACACGGCAGTGAACGCCTCCCGTGCTCATCTGACCGGTTTTTGCGTTTTCTTAGCTGGCTACACGGCAGAGA                                  >  1:9111778/1‑151

                                                                                                                                                       TTTCTTAGCTGCCTACACGGCAGTGAACTTATCAAGCGGCTGTGCTGGGCCTGTTTCGTTTTTCTTAGCTGCCTACACGGCAGTGAACGCCTTCGGTGGTGATCTTTCCGTTGTTTGCCTTTTCTTAGCTGCCTACACGGCAGTGAACAAT                             <  1:4385122/151‑1

                                                                                                                                                        TTCTTAGCTGCCTACACGGCAGTGAACTTATCAAGCGGCTGTGCTGGGCCTGTTTCGTTTTTCTTAGCTGCCTACACGGCAGTGAACGCCTTCGGTGGTGATCTTTCCGTTGTTTGCCTTTTCTTAGCTGCCTACACGGCAGTGAACAATC                            <  1:10748796/151‑1

                                                                                                                                                           TTAGCTGCCTACACGGCAGTGAACTTATCAAGCGGCTGTGCTGGGCCGGTTTCGTTTTTCTTAGCTGCCTACACGGCAGTGAACGCCTACGGGGGTGATGTTTCAGTTGTTTGCATTGTCTTAGCTGCCTACACGGCAGTGACCAAgaggg                         >  2:10769419/1‑146

                                                                                                                                                            TAGCTGCCTACACGGCAGTGAACTTATCAAGCGGCTGTGCTGGGCCTGTTTCGTTTTTCTTAGCTGCCTACACGGCAGTGAACGCCTTCGGTGGTGATCTTTCCGTTGTTTGCCTTTTCTTAGCTGCCTACACGGCAGTGAACAATCGTGC                        <  1:7139349/151‑1

                                                                                                                                                              GCTGCCTACACGGCAGTGAACTTATCAAGCGGCTGTGCTGGGCCTGTTTCGTTTTTCTTAGCTGCCTACACGGCAGTGAACGCCTTCGGTGGTGATCTTTCCGTTGTTTGCCTTTTCTTAGCTGCCTACACGGCAGTGAACAATCGTGCTC                      >  1:1732504/1‑151

                                                                                                                                                               CTGCCTACACGGCAGTGAACGTATCAAGCGGCTGTGCTGGGCGTGTTTCGTTTTTCTTAGCTGCCTACACGGCAGTGAACGCCTTCGGTGGTGATCTTTCCGTTGTTTGGCTTTTCTTAGCTGCCTACACGGCAGTGATCAAGCGTGatgg                     >  2:697525/1‑147

                                                                                                                                                                TGCCTACACGGCAGTGAACTTATCAAGCGGCTGTGCTGGGCCTGTTTCGTTTTTCTTAGCTGCCTACACGGCAGTGAACGCCTTCGGTGGTGATCTTTCCGTTGTTTGCCTTTTCTTAGCTGCCTACACGGCAGTGAACAATCGTGCTCGA                    >  2:1107623/1‑151

                                                                                                                                                                 GCCTACACGGCAGTGAACTTATCAAGCGGCTGTGCTGGGCCTGTTTCGTTTTTCTTAGCTGCCTACACGGCAGTGAACGCCTTCGGTGGTGATCTTTCCGTTGTTTGCCTTTTCTTAGCTGCCTACACGGCAGTGAACAATCGTGCTCGAG                   <  2:5648323/151‑1

                                                                                                                                                                  CCTACACGGCAGTGAACTTATCAAGCGGCTGTGCTGGGCCTGTTTCGTTTTTCTTAGCTGCCTACACGGCAGTGAACGCCTACGGTGGTGATCTTTCCGTTGTTTGCCTTTTCTTAGCTGCCTACACGGCAGTGAACAAACGTGCTCGAGA                  >  2:8929379/1‑151

                                                                                                                                                                    TACACGGCAGTGAACTTATCAAGCGGCTGTGCTGGGCCTGTTTCGTTTTTCTTAGCTGCCTACACGGCAGTGAACGCCTTCGGTGGTGATCTTTCCGTTGTTTGCCTTTTCTTAGCTGCCTACACGGCAGTGAACAATCGTGCTCGAGATA                <  1:5227146/151‑1

                                                                                                                                                                      CACGGCAGTGAACTTATCAAGCGGCTGTGCTGGGCCTGTTTCGTTTTTCTTAGCTGCCTACACGGCAGTGAACGCCTTCGGTGGTGATCTTTCCGTTGTTTGCCTTTTCTTAGCTGCCTACACGGCAGTGAACAATCGTGCTCGAGATACC              <  1:378759/151‑1

                                                                                                                                                                           CAGTGAACTTATCAAGCGGCTGTGCTGGGCCTGTTTCGTTTTTCTTAGCTGCCTACACGGCAGTGAACGCCTTCGGTGGTGATCTTTCCGTTGTTTGCCTTTTCTTAGCTGCCTACACGGCAGTGAACAATCGTGCTCGAGATACCAGCCA         <  1:8521637/151‑1

                                                                                                                                                                           CAGTGAACTTATCAAGCGGCTGTGCTGGGCCTGTTTCGTTTTTCTTAGCTGCCTACACGGCAGTGAACGCCTTCGGTGGTGATCTTTCCGTTGTTTGCCTTTTCTTAGCTGCCTACACGGCAGTGAACAATCGTGCTCGAGATACCAGCCA         >  2:10630208/1‑151

                                                                                                                                                                            AGTGAACTTATCAAGCGGCTGTGCTGGGCCTGTTTCGTTTTTCTTAGCTGCCTACACGGCAGTGAACGCCTTCGGTGGTGATCTTTCCGTTGTTTGCCTTTTCTTAGCTGCCTACACGGCAGTGAACAATCGTGCTCGAGATACCAGCCAT        <  2:2520616/151‑1

                                                                                                                                                                               GAACTGCTCAACCGGCTGTGCTGTGCCTGTTTGGTATTTCTTAGCTGCCTACACGGCAGTGAACGCCTTCGGTGGTGATCTTTCCGTTGTTTGCCTTTTCTTAGCTGCCTACACGGCAGTGAACAATCGTGCTCGAGATACCAGCCATCCG     <  2:7898179/151‑1

                                                                                                                                                                                AACTTATCAAGCGGCTGTGCTGGGCCTGTTTCGTTTTTCTTAGCTGCCTACACGGCAGTGAACGCCTTCGGTGGTGATCTTTCCGTTGTTTGCCTTTTCTTAGCTGCCTACACGGCAGTGAACAATCGTGCTCGAGATACCAGCCATCCGC    >  2:9385451/1‑151

                                                                                                                                                                                  CTTATCAAGCGGCTGTGCTGGGCCTGTTTCGTTTTTCTTAGCTGCCTACACGGCAGTGAACGCCTTCGGTGGTGATAATTCCGTAGTTTGCCTTTTCTTAGCTGCCTACACGGCAGTGAACAATCGTGCTCGAGATACGAGCAATACGAGC  >  2:2787738/1‑151

AGGTAGACGCGGACATCAAGCCCGCCGTGAATTTCTTAGCTGCCTACACGGCAGTGAACGAGAGCCGCAGGGAGCGGGGCCGCAAACTCCTTTTCTTAGCTGCCTACACGGCAGTGAACTGGAGGCGACCGAACCCGGGCTGTTCGAGGATTTTCTTAGCTGCCTACACGGCAGTGAAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_008463/2936006‑2936184

‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttttcttagctgcctacacggcagtgaacTTATCAAGCGGCTGTGCTGGGCCTGTTTCGTTTTTCTTAGCTGCCTACACGGCAGTGAACGCCTTCGGTGGTGATCTTTCCGTTGTTTGCCTTTTCTTAGCTGCCTACACGGCAGTGAACAATCGTGCTCGAGATACCAGCCATCCGCGC  >  NC_008463/2936305‑2936454

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 11 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.

GATK/CNVnator alignment

N/A