Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I1 R1
|
256 |
507.2 |
22121016 |
99.2% |
21944047 |
150.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_008463 |
3,673,519 |
N→C |
intergenic (+68/+30) |
fabI → / ← PA14_RS16690 |
enoyl‑ACP reductase FabI/SurA N‑terminal domain‑containing protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_008463 | 3,673,519 | 0 | N | C | 99.8%
| 1598.4
/ NA
| 431 | intergenic (+68/+30) | fabI/PA14_RS16690 | enoyl‑ACP reductase FabI/SurA N‑terminal domain‑containing protein |
| Reads supporting (aligned to +/- strand): ref base N (0/0); major base C (249/181); minor base G (0/1); total (249/182) |
| Fisher's exact test for biased strand distribution p-value = 4.22e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 443 total aligned reads displayed.
GCCAGCGGTATCAGTGGCGAGATCCTCTACGTCGATGGCGGCTTCAACACTACCGCCATGGGCCCGCTGGACGACGACTGATCACCCCGCTCATGAAAAATGGCCGCTTCGAGCGGCCTTTTTCATGGGCGGAATAAAGAAAAGGCCGNGTAAACGGCCTTTTTCTTGCATCTCGGTCTCAGTATTTCTCGACTTCCGCCTTGTCCTGCAACTGACGGCGGAAGGCGGCGAAGTCTGCCTGTCCGCTGCGCGAAGCCAGGAAGCGGCGGTACATGGCCTTCTCGTCGTCGGAGATAG > NC_008463/3673371‑3673667
|
gCCAGCGGTATCAGTGGCGAGATCCTCTACGTCGATGGCGGCTTCAACACTACCGCCATGGGCCCGCTGGACGACGACTGATCACCCCGCTCATGAAAAATGGCCGCTTCGAGCGGCCTTTTTCATGGGCGGAATAAAGAAAAGGCcgcg > 1:8764856/1‑150 (MQ=255)
aGCGGTATCAGTGGCGAGATCCTCTACGTCGATGGCGGCTTCAACACTACCGCCATGGGCCCGCTGGACGACGACTGATCACCCCGCTCATGAAAAATGGCCGCTTCGAGCGGCCTTTTTCATGGGCGGAATAAAGAAAAGGCCGCGTaa < 1:185514/150‑1 (MQ=255)
gCGGTATCAGTGGCGAGATCCTCTACGTCGCTGGCGGCTTCAACACTACCGCCATGGGCCCGCTGGACGACGACTGATCACCCCGCTCATGAAAAATGGCCGCTTCGAGCGGCCTTTTTCATGGGCGGAATAAAGAAAAGGCCGCGTaag < 2:10229151/150‑2 (MQ=255)
gCGGTATCAGTGGCGAGATCCTCTACGTCGATGGCGGCTTCAACACTACCGCCATGGGCCCGCTGGACGACGACTGTTCACCCCGCTCATGAAAAATGGCCGCTTCGAGCGGCCTTTTTCATGGGCGGAATAAAGAAAAGGCCGCGTaag > 2:5761342/1‑149 (MQ=255)
gCGGTATCAGTGGCGAGATCCTCTACGTCGATGGCGGCTTCAACACTACCGCCATGGGCCCGCTGGACGACGACTGATCACCCCGCTCATGAAAAATGGCCGCTTCGAGCGGCCTTTTTCATGGGCGGAATAAAGAAAAGGCCGCGTaag < 1:7491683/150‑2 (MQ=255)
gCGGTATCAGTGGCGAGATCCTCTACGTCGATGGCGGCTTCAACACTACCGCCATGGGCCCGCTGGACGACGACTGATCACCCCGCTCATGAAAAATGGCCGCTTCGAGCGGCCTTTTTCATGGGCGGAATAAAGAAAAGGCCGCGTaag < 2:10510688/150‑2 (MQ=255)
gCGGTATCAGTGGCGAGATCCTCTACGTCGATGGCGGATTCAACACTACCGCCATGGGCCCGCTGGACGACGACTGATCACCCCGCTCATGAAAAATGGCCGCTTCGAGCGGCCTTTTTCATGGGCGGAATAAAGAAAAGGCCGCGTaag > 2:8435627/1‑149 (MQ=255)
ggTATCAGTGGCGAGATCCTCTACGTCGATGGCGGCTTCAACACTACCGCCATGGGCCCGCTGGACGACGACTGATCACCCCGCTCATGAAAAATGGCCGCTTCGAGCGGCCTTTTTCATGGGCGGAATAAAGAAAAGGCCGCGTAAGCg < 1:562163/150‑1 (MQ=255)
ggTATCAGTGGCGAGATCCTCTACGTCGATGGCGGCTTCAACACTACCGCCATGGGCCCGCTGGACGACGACTGATCACCCCGCTCATGAAAAATGGCCGCTTCGAGCGGCCTTTTTCATGGGCGGAATAAAGAAAAGGCCGCGTAAGCg > 1:1343465/1‑150 (MQ=255)
gTATCAGTGGCGAGATCCTCTACGTCGATGGCGGCTTCAACACTACCGCCATGGGCCCGCTGGCCGACGACTGATCACCCCGCTCATGAAAAATGGCCGCTTCGAGCGGCCTTTTTCATGGGCGGAATCAAGAAAAGGCCGCGTAAGCgg < 2:3174274/150‑1 (MQ=255)
tATCAGTGGCGAGATCCTCTACGTCGATGGCGGCTTCAACACTACCGCCATGGGCCCGCTGGACGACGACTGATCACCCCGCTCATGAAAAATGGCCGCTTCGAGCGGCCTTTTTCATGGGCGGAATAAAGAAAAGGCCGCGTAAGCGGc > 1:6505743/1‑150 (MQ=255)
aTCAGTGGCGAGATCCTCTACGTCGATGGCGGCTTCAACACTACCGCCATGGGCCCGCTGGACGACGACTGATCACCCCGCTCATGAAAAATGGCCGCTTCGAGCGGCCTTTTTCATGGGCGGAATAAAGAAAAGGCCGCGTAAGCGGcc < 1:5705102/150‑1 (MQ=255)
tCAGTGGCGAGATCCTCTACGTCGATGGCGGCTTCAACACTACCGCCATGGGCCCGCTGGACGACGACTGATCACCCCGCTCATGAAAAATGGCCGCTTCGAGCGGCCTTTTTCATGGGCGGAATAAAGAAAAGGCCGCGTAAGCGGCCt > 2:4918808/1‑150 (MQ=255)
cAGTGGCGAGATCCTCTACGTCGATGGCGGCTTCAACACTACCGCCATGGGCCCGCTGGACGACGACTGATCACCCCGCTCATGAAAAATGGCCGCTTCGAGCGGCCTTTTTCATGGGCGGAATAAAGAAAAGGCCGCGTAAGCGGCCtt < 1:4113164/150‑1 (MQ=255)
aGTGGCGAGATCCTCTACGTCGATGGCGGCTTCAACACTACCGCCATGGGCCCGCTGGACGACGACTGATCACCCCGCTCATGAAAAATGGCCGCTTCGAGCGGCCTTTTTCATGGGCGGAATAAAGAAAAGGCCGCGTAAGCGGCCttt > 2:465578/1‑150 (MQ=255)
aGTGGCGAGATCCTCTACGTCGATGGCGGCTTCAACACTACCGCCATGGGCCCGCTGGACGACGACTGATCACCCCGCTCATGAAAAATGGCCGCTTCGAGCGGCCTTTTTCATGGGCGGAATAAAGAAAAGGCCGCGTAAGCGGCCttt < 1:7278121/150‑1 (MQ=255)
gTGGCGAGATCCTCTACGTCGATGGCGGCTTCAACACTACCGCCATGGGCCCGCTGGACGACGACTGATCACCCCGCTCATGAAAAATGGCCGCTTCGAGCGGCCTTTTTCATGGGCGGAATAAAGAAAAGGCCGCGTAAGCGGCCtttt > 1:4209497/1‑150 (MQ=255)
gggCGAGATCCTCTCCGTCGCGGGCGGCTACAACACTCCCGCCATGGGCCCGCTGGACGACGACTGATCACCCCGCACATGAAAAAGGGCCGCTTCGAGCGGCATTTTTCATGGGCGGAATAACGAAAAGGCCGCGTAAGCGGCCttttc < 2:6702370/149‑2 (MQ=255)
ggCGCGAACCTCTACGTCGATGGCGGCTTCAACACTACCGCCAGGGGCCCGCTGGACGACGACTGATCACCCCGCTCATGAAAAATGGCCGCTTCGAGCGGCCTTTTTCATGGGCGGAATAACGAAAAGGCCGCGTAAGCGGCCttttct < 1:4466872/150‑3 (MQ=255)
ggCGAGATCCTCTACGTCGATGGCGGCTTCAACACTACCGCCATGGGCCCGCTGGACGACGACTGATCACCCCGCTCATGAAAAATGGCCGCTTCGAGCGGCCTTTTTCATGGGCGGAATAAAGAAAAGGCCGCGTAAGCGGCCttttct < 2:8021985/150‑3 (MQ=255)
gagaTCCTCTACGTCGATGGCGGCTTCAACACTACCGCCATGGGCCCGCTGGACGACGACTGATCACCCCGCTCATGAAAAATGGCCGCTTCGAGCGGCCTTTTTCATGGGCGGAATAAAGAAAAGGCCGCGTAAGCGGCCttttctctg > 1:5562722/1‑145 (MQ=255)
agaTCCTCTACGTCGATGGCGGCTTCATCACTACCGCCATGGGCCCGCTGGACGACGACTGATCACCCCGCTCATGAAAATTGGCCGCTTCGAGCGGCGTTGTTCATGGGCGGTATAAAGAAAAGGCCGCGTAGGCGGCCttttctctgc > 2:9131979/1‑144 (MQ=255)
agaTCCTCTACGTCGATGGCGGCTTCAACACTACCGCCATGGGCCCGCTGGACGACGACTGATCACCCCGCTCATGAAAAATGGCCGCTTCGAGCGGCCTTTTTCATGGGCGGAATAAAGAAAAGGCCGCGTAAGCGGCCttttctctgc < 2:9334341/150‑7 (MQ=255)
gaTCCTCTACGTCGTTGGCGGCTTCAACACTACCGCCATGGGCCCGCTGGACGACTACTGATCACCCCGCTCATGAAAAATGGCCGCTTCGAGCGGCCTTTTTCATGGGCGGAATAAACAAAAGGCCGCGTAAGCGGCCttttctctgca < 1:9588328/150‑8 (MQ=255)
tACGTCGATGGCGGCTTCAACACTCCCGCCATGGGCCCGCTGGCCGACGACTGATCACCCCGCTCATGAAAAATGGCCGCTTCGAGCGGCCTTTTTAATGGGCGGAATAAAGAAAAGGCCGCGTAAGCGGCCTTTTCTCTGCATCTCGGt < 1:6937101/150‑1 (MQ=255)
tACGTCGATGGCGGCTTCAACACTACCGCCATGGGCCCGCTGGACGACGACTGATCACCCCGCTCATGAAAAATGGCCGCTTCGAGCGGCCTTTTTCATGGGCGGAATAAAGAAAAGGCCGCGTAAGCGGCCTTTTCTCTGCATCTCGGt > 2:7778613/1‑150 (MQ=255)
aCGTCGATGGCGGCTTCAACACTACCGCCATGGGCCCGCTGGACGACGACTGATCACCCCGCTCATGACAAATGGCCGCTTCGAGCGGCCTTTTTCATGGGCGGAATAAAGAAAAGGCCGCGTAAGCGGCCTTTTCTCTGCATCTCGGtc < 2:2400803/150‑1 (MQ=255)
aCGTCGATGGCGGCTACAACCCTCCCGCCATGGGCCCGCTGGACCACGACTGATCACCCCGCTCATGAACATGGGCCGCTTCGTGCGGCCTTTTTCCTGGGCGTAATAAAGAAAAGGCCGCGTAAGCGGCCTTTTCTCTGCATCTCGGtc < 1:9296888/150‑1 (MQ=255)
tCGATGGCGGCTTCAACACTACCGCCATGGGCCCGCTGGACGACGACTGATCACCCCGCTCCTGAAAAATGGCCGCTTCGAGCGGCCTTTTTAATGGGCGGAATAAAGAAAAGGCCGCGTAAGCGGCCTTTTCTCTGCATCTCGGTCTCa < 2:4283371/150‑1 (MQ=255)
gATGGCGGCTTCAACACTACCACCATGGGCCCGCTGGACGACGACAGATCACCCCGCTCATGAAAAATGGCCGCTTCGAGAGGCCAATTTCATGGGCGGAATTCAGAAAAGGACGCGTAAGCGGACTTGTCTCTGCATCTCGGTCTCAGt > 2:7191925/1‑150 (MQ=255)
aTGGCGGCTTCAACACTACCGCCATGGGCCCGCTGGACGACGACTGATCACCCCGCTCATGAAAAATGGCCGCTTCGAGCGGCCTTTTTCATGGGCGGAATAAAGAAAAGGCCGCGTAAGCGGCCTTTTCTCTGCATCTCGGTCTCAGTa > 1:598891/1‑150 (MQ=255)
aTGGCGGCTTCAACACTACCGCCATGGGCCCGCTGGACGACGACTGATCACCCCGCTCATGAAAAATGGCCGCTTCGAGCGGCCTTTTTCATGGGCGGAATAAAGAAAAGGCCGCGTAAGCGGCCTTTTCTCTGCATCTCGGTCTCAGTa > 1:6529927/1‑150 (MQ=255)
tGGCGGCTTCAACACTACCGCCATGGGCCCGCTGGACGACGACTGATCACCCCGCTCAAGAAAAAGGGCCGCTTCGAGCGGCCTTTTTCATGGGCGGAATAACGACAAGGCCGCGTAAGCGGCCTTTTCTCTGCATCTCGGTCTCAGTAt < 1:6792341/150‑1 (MQ=255)
tCAACACTACCGCCATGGGCCCGCTGGACGACGACTGATCACCCCGCTCATGAAAAATGGCCGCTTCGAGCGGCCTTTTTCATGGGCGGAATAAAGAAAAGGCCGCGTAAGCGGCCTTTTCTCTGCATCTCGGTCTCAGTATTTCTCGAc > 2:7369006/1‑150 (MQ=255)
cAACACTACCGCCATGGGCCCGCTGGACGACGACTGATCACCCCGCTCATGAAAAATGGCCGCTTCGAGCGGCCTTTTTCATGGGCGGAATAAAGAAAAGGCCGCGTAAGCGGCCTTTTCTCTGCATCTCGGTCTCAGTATTTCTCGACt > 1:521235/1‑150 (MQ=255)
cAACACTACCGCCATGGGCCCGCTGGACGACGACTGATCACCCCGCTCATGAAAAATGGCCGCTTCGAGCGGCCTTTTTCATGGGCGGAATAAAGAAAAGGCCGCGTAAGCGGCCTTTTCTCTGCATCTCGGTCTCAGTATTTCTCGACt > 1:10858233/1‑150 (MQ=255)
aaCACTACCGCCATGGGCCCGCTGGACGACGACTGATCACCCCGCTCATGAAAAATGGCCGCTTCGAGCGGCCTTTTTCATGGGCGGAATAAAGAAAAGGCCGCGTAAGCGGCCTTTTCTCTGCATCTCGGTCTCAGTATTTCTCGACtt < 2:8542368/150‑1 (MQ=255)
acacTACCGCCATGGGCCCGCTGGACGACGACGGATCACCCCGCTCAGGAAAAATGGCCGCTTCGAGCGGCCTTTTTCATGGGCGGAATACTGAAAAGGCCGCGTCAGCGTCCTTTTCTCTGCATCTCGGTCTCAGTATTTCTCGACTTc < 2:3371155/150‑1 (MQ=255)
cacTACCGCCATGGGCCCGCCGGACGACGACTGAACACCCCGCTCATGAAAAATGGCCGCTTCGAGCGGCCTTTTTCATGGGCGGAATAAAGAAAAGGCCGCGTAAGCGGCCTTTTCTCTGCATCTCGGTCTCAGTATTTCTCGACTTcc < 1:8986282/150‑1 (MQ=255)
ccATGGGCCCGCTGGACGACGACTGATCACCCCGCTCATGAAAAATGGCCGCTTCGAGCGGCCTTTTTCATGGGCGGAATAAAGAAAAGGCCGCGTAAGCGGCCTTTTCTCTGCATCTCGGTCTCAGTATTTCTCGACTTCCGCCTTGTc > 1:969887/1‑150 (MQ=255)
cATGGGCCCGCTGGACGACGACTGATCACCCCGCTCATGAAAAATGGCCGCTTCGAGCGGCCTTTTTCATGGGCGGAATAAAGAAAAGGCCGCGTAAGCGGCCTTTTCTCTGCATCTCGGTCTCAGTATTTCTCGACTTCCGCCTTGTcc > 2:5964490/1‑150 (MQ=255)
gCCCGCTGGACGACGACTGATCCCCCCGCTCATTAAAAATGGCCGATACGCGCGGCATTTTTCAGGGGCGGAATAAAGAAACGGCCGCGTAAGCGGCCTTTTCTCTGCATCTCGGTCTCAGTATTTCTCGACTTCCGCCTTGTCCTGCaa < 1:260948/150‑1 (MQ=255)
ccGCTGGACGACGACTGATCACCCCGCTCATGAAAAATGGCCGCTTCGAGCGGCCTTTTTCATGGGCGGAATAAAGAAAAGGCCGCGTAAGCGGCCTTTTCTCAGCATCTCGGTCTCAGTATTTCTCGACTTCCGCCTTGTCCTGCAACt < 2:3912780/150‑1 (MQ=255)
gCTGGACGACGACTGATCACCCCGCTCATGAAAAATGGCCGCTTCGAGCGGCCTTTTTCATGGGCGGAATAAAGAAAAGGCCGCGTAAGCGGCCTTTTCTCTGCATCTCGGTCTCAGTATTTCTCGACTTCCGCCTTGTCCTGCAACTGa > 1:2216673/1‑150 (MQ=255)
gCTGGACGACGACTGATCACCCCGCACATTAAAAATGGCCGCTTCGAGCGGCCTTTTTCATGGGCGGAATAAAGAAAAGGCCGCGTAAGCGGCCTTTTCTCTGCATCTCGGTCTCAGTATTTCTCGACTTCCGCCTTGTCCTGCAACTGa < 1:3194228/150‑1 (MQ=255)
tGGACGACGACTGATCACCCCGCTCATGAAAAATGGCCGCTTCGAGCGGCCTTTTTCATGGGCGGAATAAAGAAAAGGCCGCGTAAGCGGCCTTTTCTCTGCATCTCGGTCTCAGTATTTCTCGACTTCCGCCTTGTCCTGCAACTGAcg > 2:1304065/1‑150 (MQ=255)
ggACGACGACTGATCACCCCGCTCATGAAAAATGGCCGCTTCGAGCGGCCTTTTTCATGGGCGGAATAAAGAAAAGGCCGCGTAAGCGGCCTTTTCTCTGCATCTCGGTCTCAGTATTTCTCGACTTCCGCCTTGTCCTGCAACTGAcgg > 1:3745823/1‑150 (MQ=255)
ccactacTGATCACCCCGCACATTAAAAATGGCCGCTTCGAGCGGCCTTTTTCATGGGCGGAATAAAGAAAAGGCCGCGTAAGCGGCCTTTTCTCTGCATCTCGGTCTCAGTATTTCTCGACTTCCGCCTTGTCCTGCAACTGAcggcgg < 1:8371393/145‑1 (MQ=255)
acgacTGATCACCCCGCTCATGAAAAAGGGCCGCTTCGAGCGGCCTTTTTCATGGGCGGAATAAAGAAAAGGCCGCGTAAGCGGCCTTTTCTCTGCATCTCGGTCTCAGTATTTCTCGACTTCCGCCTTGTCCTGCAACTGACGGCGGaa < 2:6471360/150‑1 (MQ=255)
cgacTGATCACCCCGCTCATGAAAAATGGCCGCTTCGAGCGGCCTTTTTCATGGGCGGAATAAAGAAAAGGCCGCGTAAGCGGCCTTTTCTCTGCATCTCGGTCTCAGTATTTCTCGACTTCCGCCTTGTCCTGCAACTGACGGCGGTAg > 1:1563168/1‑150 (MQ=255)
gacTGATCACCCCGCTCATGAAAAATGGCCGCTTCGAGCGGCCTTTTTCATGGGCGGAATAAAGAAAAGGCCGCGTAAGCGGCCTTTTCTCTGCCTCTCGGTCTCAGTATTTCTCGACTTCCGCCTTGTCCTGCAACTGACGGCGGAAgg < 2:3481482/150‑1 (MQ=255)
gacTGATCACCCCGCTCATGAAAAATGGCCGCTTCGAGCGGCCTTTTTCATGGGCGGAATAAAGAAAAGGCCGCGTAAGCGGCCTTTTCTCTGCATCTCGGTCTCAGTATTTCTCGACTTCCGCCTTGTCCTGCAACTGACGGCGGACgg > 2:7978360/1‑150 (MQ=255)
cACCCCGCTCATGAAAAATGGCCGCTTCGAGCGGCCTTTTTCATGGGCGGAATAAAGAAAAGGCCGCGTAAGCGGCCTTTTCTCTGCATCTCGGTCTCAGTATTTCTCGACTTCCGCCTTGTCCTGCAACTGACGGCGGAAGGCGGCGaa > 2:8172071/1‑150 (MQ=255)
cccGCTCCTGAAAAATGGCCTCTTCGAGCGGCCTTTTTCATGGGCGGAATAACCAAAAGGCCGCGTAAGCGGCCTTTTCTCTGCATCTCGGTCTCAGTATTTCTCGACTTCCGCCTTGTCCTGCAACTGACGGCGGAAGGCGGCGAAGTc < 2:2776536/150‑1 (MQ=255)
cccGCTCATGAAAAATGGCCGCTTCGAGCGGCCTATTTCATGGGCGGAATAAAGCAAAGGCCGCGTAAGCGGCCTTTTCTCTGCATCTCGGTCTCAGTATTTCTCGACTTCCGCCTTGTCCTGCAACTGACGGCGGAAGGCGGCGAAGTc < 1:5389980/150‑1 (MQ=255)
cTCATGAAAAATGGCCGCTTCGAGCGGCCTTTTTCATGGGCGGAATAACGAAAAGGCCGCGTAAGCGGCCTTTTCTCTGCATCTCGGTCTCAGTATTTCTCGACTTCCGCCTTGTCCTGCAACTGACGGCGGAAGGCGGCGAAGTCTGcc < 1:1496208/150‑1 (MQ=255)
aTGAAAAATGGCCGCTTCGAGCGGCCTTTTTCATGGGCGGAATAAAGAAAAGGCCGCGTAAGCGGCCTTTTCTCTGCATCTCGGTCTCAGTATTTCTCGACTTCCGCCTTGTCCTGCAACTGACGGCGGAAGGCGGCGAAGTCTGCCTGt > 1:8452699/1‑150 (MQ=255)
aTGAAAAATGGCCGCTTCGAGCGGCCTTTTTCATGGGCGGAATAAAGAAAAGGCCGCGTAAGCGGCCGTGTGTCGGCATCTCGGTCTCAGTATTTCTCGACTTCCGCCGTGTCCTGCAACTGACGGCGGAAGGCGGCGAAGTCTGCCTGt > 2:4432151/1‑150 (MQ=255)
gAAAAATGGCCGCTTCGAGCGGCCTTTTTCATGGGCGGAATAAAGAAAAGGCCGCGTAAGCGGCCTTTTCTCTGCATCTCGGTCTCAGTATTTCTCGACTTCCGCCTTGTCCTGCAACTGACGGCGGAAGGCGGCGAAGTCTGCCTGTcc > 2:8743899/1‑150 (MQ=255)
aaaaTGGCCGCTCCGCGCGGCCTTTTGCTTGCGCGGAATAAACACATGGCGGGGTAAGCGGCCATTTCTCTGCATCTCGGTCTCAGTATTTCTCGACTTCCGCCTTGTCCTGCAACTGACGGCGGAAGGCGGCGAAGTCTGCCTGTCCGc < 1:2860261/150‑1 (MQ=255)
aaaTGGCCGCTTCGAGCGGCCTTTTTCATGGGCGGAATAAAGAAAAGGCCGCGTAAGCGGCCTTTTCTCTGCATCTCGGTCTCAGTATTTCTCGACTTCCGCCTTGTCCTGCAACTGACGGCGGAAGGCGGCGAAGTCTGCCTGTCCGCt > 1:10611592/1‑150 (MQ=255)
aTGGCCGCTTCGAGCGGCCTTTTTCATGGGCGGAATAAAGAACAGGCCGCGTAAGCGGCCTTTTCTCTGCATCTCGGTCTCAGTATTTCTCGACTTCCGCCTTGTCCTGCAACTGACGGCGGAAGGCGGCGAAGTCTGCCTGTCCGCTgc < 2:6042384/150‑1 (MQ=255)
aTGGCCGCTTCGAGCGGCCTTTTTCATGGGCGGAATAAAGAAAAGGCCGCGTAAGCGGCCTTTTCTCTGCATCTCGGTCTCAGTATTTCTCGACTTCCGCCTTGTCCTGCAACTGACGGCGGAAGGCGGCGAAGTCTGCCTTTCCGCTgc > 1:7929887/1‑150 (MQ=255)
aTGGCCGCTTCGAGCGGCCTTTTTCATGGGCGGAATAAAGAAAAGGCCGCGTAAGCGGCCTTTTCTCTGCATCTCGGTCTCAGTATTTCTCGACTTCCGCCTTGTCCTGCAACTGACGGCGGAAGGCGGCGAAGTCTGCCTGTCCGCTgc > 2:8791122/1‑150 (MQ=255)
aTGGCCGCTTCGAGCGGCCTTTTTCATGGGCGGAATAAAGAAAAGGCCGCGTAAGCGGCCTTTTCTCTGCATCTCGGTCTCAGTATTTCTCGACTTCCGCCTTGTCCTGCAACTGACGGCGGAAGGCGGCGAAGTCTGCCTGTCCGCTgc > 1:10429158/1‑150 (MQ=255)
aTGGCCGCTGCGAGCGGCCTTTTTCATGGGCGGAATAAAGAAAAGGCCGCGTAAGCGGCCTTTTCTCTGCATCTCGGTCTCAGTATTTCTCGACTTCCGCCTTGTCCTGCAACTGACGGCGGAAGGCGGCGAAGTCTGCCTGTCCGCTgc < 1:1101356/150‑1 (MQ=255)
ggCCGCTTCGAGCGGCCTTTTTCATGGGCGGAATAAAGAAAAGGCCGCGTAAGCGGCCTTTTCTCTGCATCTCGGTCTCAGTATTTCTCGACTTCCGCCTTGTCCTGCAACTGACGGCGGAAGGCGGCGAAGTCTGCCTGTCCGCTgcgc > 2:9605542/1‑150 (MQ=255)
gCCGCTTCGAGCGGCCTTTTTCATGGGCGGAATAAAGAAAAGGCCGCGTAAGCGGCCTTTTCTCTGCATCTCGGTCTCAGTATTTCTCGACTTCCGCCTTGTCCTGCAACTGACGGCGGAAGGCGGCGAAGTCTGCCTGTCCGCTGcgcg < 2:6978822/150‑1 (MQ=255)
ttCGAGCGGCCTTTTTCATGGGCGGAATAAAGAAAAGGCCGCGTAAGCGGCCTTTTCTCTGCATCTCGGTCTCAGTATTTCTCGACTTCCGCCTTGTCCTGCAACTGACGGCGGAAGGCGGCGAAGTCTGCCTGTCCGCTGCGCGAAGcc > 1:6329590/1‑150 (MQ=255)
gAGCGGCCTTTTTCATGGGCGGAATAACGCAAAGGCCGCGTAAGCGGCCTTTTCTCTGCATCTCGGTCTCAGTATTTCTCGACTTCCGCCTTGTCCTGCAACTGACGGCGGAAGGCGGCGAAGTCTGCCTGTCCGCTGCGCGAAGCCAgg < 2:2631982/150‑1 (MQ=255)
aGCGGCCTTTTTCATGGGCGGAATAAAGAAAAGGCCGCGTAAGCGGCCTTTTCTCTGCATCTCGGTCTCAGTATTTCTCGACTTCCGCCTTGTCCTGCAACTGACGGCGGAAGGCGGCGAAGTCTGCCTGTCCGCTGCGCGAAGCCAGGa > 1:5922173/1‑150 (MQ=255)
aGCGGCCTTTTTCATGGGCGGAATAAAGAAAAGGCCGCGTAAGCGGCCTTTTCTCTGCATCTCGGTCTCAGTATTTCTCGACTTCCGCCTTGTCCTGCAACTGACGGCGGAAGGCGGCGAAGTCTGCCTGTCCGCTGCGCGAAGCCAGGa > 1:4737188/1‑150 (MQ=255)
gCGGCCTTTTTCATGGGCGGAATAAAGAAAAGGCCGCGTAAGCGGCCTTTTCTCTGCATCTCGGTCTCAGTATTTCTCGACTTCCGCCTAGTCCTGCAACTGACGGCGGAAGGCGGCGAAGTCTGCCTGTCCGCTGCGCGAAGCCAGGaa > 2:5391526/1‑150 (MQ=255)
ggCCTTTTTCATGGGCGGAATAAAGAAAAGGCCGCGTAAGCGGCCTTTTCTCTGCATCTCGGTCTCAGTATTTCTCGACTTCCGCCTTGTCCTGCAACTGACGGCGGAAGGCGGCGAAGTCTGCCTGTCCGCTGCGCGAAGCCAGGAAgc > 1:3827205/1‑150 (MQ=255)
ggCCTTTTTCATGGGCGGAATAAAGAAAAGGCCGCGTAAGCGGCCTTTTCACTGCATCTCGGTCTCAGTATTTCTCGACTTCCGCCTTGTCCTGCAACTGACGGCGGAAGGCGGCGAAGTCTGCCTGTCCGCTGCGCGAAGCCAGGAAgc > 1:2522798/1‑150 (MQ=255)
gCCTTTTTCATGGGCGGAATAAAGAAAAGGCCGCGTAAGCGGCCTTTTCTCTGCATCTCGGTCTCAGTATTTCTCGACTTCCGCCTTGTCCTGCAACTGACGGCGGAAGGCGGCGAAGTCTGCCTGTCCGCTGCGCGAAGCCAGGAAgcg > 2:3650301/1‑150 (MQ=255)
tttttCATGGGCGGAATAAAGAAAAGGCCGCGTAAGCGGCCTTTTCTCTGCATCTCGGTCTCAGTATTTCTCGACTTCCGCCTTGTCCTGCAACTGACGGCGGAAGGCGGCGAAGTCTGCCTGTCCGCTGCGCGAAGCCAGGACgcggcg > 2:5163443/1‑150 (MQ=255)
tttttCATGGGCGGAATAAAGAAAAGGCCGCGTAAGCGGCCTTTTCTCTGCATCTCGGTCTCAGTATTTCTCGACTTCCGCCTTGTCCTGCAACTGACGGCGGAAGGCGGCGAAGTCTGCCTGTCCGCTGCGCGAAGCCAGGAAgcggcg < 1:2303512/150‑1 (MQ=255)
ttCATGGGCGGAATAAAGAAAAGGCCGCGTAAGCGGCCTTTTCTCTGCATCTCGGTCTCAGTATTTCTCGACTTCCGCCTTGTCCTGCAACTGACAGCGGAAGGCGGCGAAGTCTGCCTGTCCGCTGCGCGAAGCCAGGAAGCGGCGGTa > 2:660515/1‑150 (MQ=255)
tCATGGGCGGAATAAAGAAAAGGCCGCGTAAGCGGCCTTTTCTCTGCATCTCGGTCTCAGTATTTCTCGACTTCCGCCTTGTCCTGCAACTGACGGCGGAAGGCGGCGAAGTCTGCCTGTCCGCTGCGCGAAGCCAGGAAGCGGCGGTAc > 1:8181173/1‑150 (MQ=255)
tGGGCGGAATAAAGAAAAGGCCGCGTAAGCGGCCTTTTCTCTGCATCTCGGTCTCAGTATTTCTCGACTTCCGCCTTGTCCTGCAACTGACGGCGGAAGGCGGCGAAGTCTGCCTGTCCGCTGCGCGAAGCCAGGAAGCGGCGGTACATg < 1:4986417/150‑1 (MQ=255)
gggCGGAATAAAGAAAAGGCCGCGTAAGCGGCCTTTTCTCTGCATCTCGGTCTCAGTATTTCTCGACTTCCGCCTTGTCCTGCAACTGACGGCGGAAGGCGGCGAAGTCTGCCTGTCCGCTGCGCGAAGCCAGGAAGCGGCGGTACATgg < 1:9864389/150‑1 (MQ=255)
ggCGGAATAAAGAAAAGGCCGCGTAAGCGGCCTTTTCTCTGCATCTCGGTCTCAGTATTTCTCGACTTCCGCCTTGTCCTGCAACTGACGGCGGAAGGCGGCGAAGTCTGCCTGTCCGCTGCGCGAAGCCAGGAAGCGGCGGTACATGGc > 2:9792950/1‑150 (MQ=255)
ggAATAAAGAAAAGGCCGCGTAAGCGGCCTTTTCTCTGCATCTCGGTCTCAGTATTTCTCGACTTCCGCCTTGTCCTGCAACTGACGGCGGAAGGCGGCGAAGTCTGCCTGTCCGCTGCGCGAAGCCAGGAAGCGGCGGTACATGGCCtt > 1:8668561/1‑150 (MQ=255)
aaTAAAGAAAAGGCCGCGTAAGCGGCCTTTTCTCTGCATCTCGGTCTCAGTATTTCTCGACTTCCGCCTTGTCCTGCAACTGACGGCGGAAGGCGGCGAAGTCTGCCTGTCCGCTGCGCGAAGCCAGGAAGCGGCGGTACATGGCCTtct > 2:228123/1‑150 (MQ=255)
tAAAGAAAAGGCCGCGTAAGCGGCCTTTTCTCTGCATCTCGGTCTCAGTATTTCTCGACTTCCGCCTTGTCCTGCAACTGACGGCGGAAGGCGGCGAAGTCTGCCTGTCCGCTGCGCGAAGCCAGGAAGCGGCGGTACATGGCCTTCtcg < 1:10037165/150‑1 (MQ=255)
aaaGAAAAGGCCGCGTAAGCGGCCTTTTCTCTGCATCTCGGTCTCAGTATTTCTCGACTTCCGCCTTGTCCTGCAACTGACGGCGGAAGGCGGCGAAGTCTGCCTGTCCGCTGCGCGAAGCCAGGAAGCGGCGGTACATGGCCTTCtcgt > 2:10727799/1‑150 (MQ=255)
aaaGAAAAGGCCGCGTAAGCGGCCTTTTCTCTGCATCTCGGTCTCAGTATTTCTCGACTTCCGCCTTGTCCTGCAACTGACGGCGGAAGGCGGCGAAGTCTGCCTGTCCGCTGCGCGAAGCCAGGAAGCGGCGGTACATGGCCTTCtcgt > 1:3526021/1‑150 (MQ=255)
aaGAAAAGGCCGCGTAAGCGGCCTTTTCTCTGCATCTCGGTCTCAGTATTTCTCGACTTCCGCCTTGTCCTGCAACTGACGGCGGAAGGCGGCGAAGTCTGCCTGTCCGCTGCGCGAAGCCAGGAAGCGGCGGTACATGGCCTTCtcgtc > 2:1243333/1‑150 (MQ=255)
aGAAAAGGCCGCGTACGCGTCCATATCTCTGCATCTCGGTCTCAGTATTTCTCGACTTCCGCCTTGTCCTGCATCTGACGGCGGAAGGCGGCGAAGTCTGCCTGTCCGCTGCTCGAAGCCAGGAAGCGGCGGTACATGGCCTTCtcgtag < 2:6086994/150‑3 (MQ=255)
aGAAAAGGCCGCGTAAGCGGCCTTTTCTCTGCATCTCGGTCTCAGTATTTCTCGACTTCCGCCTTGTCCTGCAACTGACGGCGGAAGGCGGCGAAGTCTGCCTGTCCGCTGCGCGAAGCCAGGAAGCGGCGGTACATGGCCTTCtcgtcg > 2:1902921/1‑150 (MQ=255)
aaaaGGCCGCGTAAGCGGCCTTTTCTCTGCATCTCGGTCTCAGTATTTCTCGACTTCCGCCTTGTCCTGCAACTGACGGCGGAAGGCGGCGAAGTCTGCCTGTCCGCTGCGCGAAGCCAGGAAGCGGCGGTACATGGCCTTCtcgtcgtc < 2:2197905/150‑1 (MQ=255)
aaGGCCGCGTAAGCGGCCTTTTCTCTGCATCTCGGTCTCAGTATTTCTCGACTTCCGCCTTGTCCTGCAACTGACGGCGGAAGGCGGCGAAGTCTGCCTGTCCGCTGCGCGAAGCCAGGAAGCGGCGGTACATGGCCTTCTCGTCGTCgg < 2:10359498/150‑1 (MQ=255)
ggCCGCGTAAGCGGCCTTTTCTCTGCATCTCGGTCTCAGTATTTCTCGACTTCCGCCTTGTCCTGCAACTGACGGCGGAAGGCGGCGAAGTCTGCCTGTCCGCTGCGCGAAGCCAGGAAGCGGCGGTACATGGCCTTCTCGTCGTCGgag < 2:2880565/150‑1 (MQ=255)
gCCGCGTAAGCGGCCTTTTCTCTGCATCTCGGTCTCAGTATTTCTCGACTTCCGCCTTGTCCTGCAACTGACGGCGGAAGGCGGCGAAGTCTGCCTGTCCGCTGCGCGAAGCCAGGAAGCGGCGGTACATGGCCTTCTCGTCGTCGgaga < 2:7725226/150‑1 (MQ=255)
gCCGCGTAAGCGGCCTTTTCTCTGCATCTCGGTCTCAGTATTTCTCGACTTCCGCCTTGTCCTGCAACTGACGGCGGAAGGCGGCGAAGTCTGCCTGTCCGCTGCGCGAAGCCAGGAAGCGGCGGTACATGGCCTTCTCGTCGTCGgaga > 1:10466858/1‑150 (MQ=255)
ccGCTTAAGCGCCCTTTTCTCTGCATCTCGGTATCAGTATTTCTCGACTTCCGCCTTGTCCTGCAACTGACGGCGGAAGGCGGCGAAGTCTGCCTGTCCGCTGCGCGAAGCCCGGAAGCGGCGGTACATGGCCTTCTCGTCGTCGGAGAt < 1:10167727/150‑1 (MQ=255)
cgcgTAAGCGGCCTTTTCTCTGCATCTCGGTCTCAGTATTTCTCGACTTCCGCCTTGTCCTGCAACTGACGGCGGAAGGCGGCGAAGTCTGCCTGTCCGCTGCGCGAAGCCAGGAAGCGGCGGTACATGGCCTTCTCGTCGTCGGCGATa < 2:6328106/150‑1 (MQ=255)
cgcgTAAGCGGCCTTTTCTCTGCATCTCGGTCTCAGTATTTCTCGACTTCCGCCTTGTCCTGCAACTGACGGCGGAAGGCGGCGAAGTCTGCCTGTCCGCTGCGCGAAGCCAGGAAGCGGCGGTACATGGCCTTCTCGTCGTCGGAGATa > 1:4220462/1‑150 (MQ=255)
gCGTAAGCGGCCTTTTCTCTGCATCTCGGTCTCAGTATTTCTCGACTTCCGCCTTGTCCTGCAACTGACGGCGGAAGGCGGCGAAGTCTGCCTGTCCGCTGCGCGAAGCCAGGAAGCGGCGGTACATGGCCTTCTCGTCGTCGGAGATAg < 1:270469/150‑1 (MQ=255)
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GCCAGCGGTATCAGTGGCGAGATCCTCTACGTCGATGGCGGCTTCAACACTACCGCCATGGGCCCGCTGGACGACGACTGATCACCCCGCTCATGAAAAATGGCCGCTTCGAGCGGCCTTTTTCATGGGCGGAATAAAGAAAAGGCCGNGTAAACGGCCTTTTTCTTGCATCTCGGTCTCAGTATTTCTCGACTTCCGCCTTGTCCTGCAACTGACGGCGGAAGGCGGCGAAGTCTGCCTGTCCGCTGCGCGAAGCCAGGAAGCGGCGGTACATGGCCTTCTCGTCGTCGGAGATAG > NC_008463/3673371‑3673667
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
