Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A0 F0 I1 R1
|
155 |
25.8 |
2285122 |
88.0% |
2010907 |
104.3 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| MC JC |
AM260479 |
1,714,344 |
(CGAAGC)17→9 |
coding (1338‑1385/3312 nt) |
h16_A1582 → |
DNA segregation ATPase FtsK/SpoIIIE related protein |
|
| | | | seq id |
start |
end |
size |
←reads |
reads→ |
gene |
description |
|---|
| * |
* |
÷ |
AM260479 |
1714287 |
1714334 |
48 |
19 [0] |
[0] 19 |
h16_A1582 |
DNA segregation ATPase FtsK/SpoIIIE related protein |
|
| |
seq id |
position |
reads (cov) |
reads (cov) |
score |
skew |
freq |
annotation |
gene |
product |
| * |
? |
AM260479 |
1714335 = | 0 (0.000) | 15 (1.320) |
11/92 |
0.1 |
100% |
coding (1329/3312 nt) |
h16_A1582 |
DNA segregation ATPase FtsK/SpoIIIE related protein |
| ? | AM260479 |
= 1714286 |
0 (0.000) | coding (1280/3312 nt) |
h16_A1582 |
DNA segregation ATPase FtsK/SpoIIIE related protein |
GATK/CNVnator alignment
N/A
