Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I1 R1
|
6081 |
0.0 |
0 |
0.0% |
0 |
0.0 |
Breseq alignment
N/A
GATK/CNVnator alignment
BRESEQ :: bam2aln output
GCTTGGGTTCGGTCTCTCACTAGGTGTTCACATTATGTTTATGAATGACATTATCCATGAATTTACTGAGTACCTGGACGTTTATGCTTTATCCATCAAGCGCTCCAAGCTGACATAAATCGCACTTTGTATCTACTTTTTTTTATTCGAAAACAAGGCACAACAATGAATCTATCGCCCTGTGAGATTTTCAATCTCAAGTTTGTGTAATAGATAGCGTTATATTATAGAACTATAAAGGTCCTTGAATATACATAGTGTTTCATTCCTATTACTGTATATGTGACTTTACATTGTTACTTCCGCGGCTATTTGACGTTTTCTGCTTCAGGTGCGGCTTGGAGGGCAAAGTGTCAGAAAATCGGCCAGGCCGTATGACACAAAAGAGTAGAAAACGAGATCTCAAATATCTCGAGGCCTGTCCTCTATACAACCGCCCAGCTCTCTGACAAAGCTCCAGAACGGTTGTCTTTTGTTTCGAAAAGCCAAGGTCCCTTATAATTGCCCTCCATTTTGTGTCACCTATTTAAGC‑AAAAAATTGAAAGTTTACTAACCTTTCATTAAAGAGAAATAACAAT > BK006934/355964‑356541
|
GCTTGGGTTCGGTCTCTCACTAGGTGTTCACATTATGTTTATGAATGACATTATCCATGAATTTACTGAGTACCTGGACGTTTATGCTTTATCCATCAAGCGCTCCAAGCTGACATAAATCGCACTTTGTATCTACTTTTTTTTATTCGAAAACAAGGCACAACAATCAATCTATCGCCCTGTGAGATTTTCAATCTCAAGTTTGTGTAATAGATAGCGTTATATTATAGAACTATAAAGGTCCTTGAATATACATAGTGTTTCATTCTTATTACTGTATATGTGACTTTACCTTGCTACT > SRR13385771.1317648/1‑301 (MQ=60)
TTGGGTTCGGTCTCTCACTAGGTGTTCACATTATGTTTATGAATGACATTATACATGAATTTACTGAGTACCTGGACGTTTATGCTTTATCCATCAAGCGCTCCAAGCTGACATAAATCGCACTTTGTATCTACTTTTTTTTATTCGAAAACAAGGCACAACAATCAATCTATCGCCCTGTGAGATTTTCAATCTCAAGTTTGTGTAATAGATAGCGTTATATTATAGAACTATAAAGGTCCTTGAATATACATAGTGTTTCATTCTTATTACTGTATATGTGACTTTACATTGCTACTTC > SRR13385771.1503068/1‑301 (MQ=60)
TGGGTTCGGTCTCTCACTAGGTGTTCACATTATGTTTATGAATGACATTATCCATGAATTTACTGAGTACCTGGACGTTTATGCTTTATCCATCAAGCGCTCCAAGCTGACATAAATCGCACTTTGTATCTACTTTTTTTTATTCGAAAACAAGGCACAACAATCAATCTATCGCCCTGTGAGATTTTCAATCTCAAGTTTGTGTAATAGATAGCGTTATATTATAGAACTATAAAGGTCCTTGAATATACATAGTGTTTCATTCTTATTACTGTATATGTGACTTTACATTGCTACTTC < SRR13385771.541790/300‑1 (MQ=60)
TGGGTTCGGTCTCTCACTAGGTGTTCACATTATGTTTATGAATGACATTATCCATGAATTTACTGAGTACCTGGACGTTTATGCTTTATCCATCAAGCGCTCCAAGCTGACATAAATCGCACTTTGTATCTACTTTTTTTTATTCGAAAACAAGGCACAACAATCAATCTATCGCCCTGTGAGATTGTCAATCTCAAGTTTGTGTAATAGATAGCGTTATATTATAGAACTATAAAGGTCCTTGAATATACATAGTGTTTCATTCTTATTACTGTATATGTGACTTTACATTGCTACTTC < SRR13385771.121270/300‑1 (MQ=60)
GGGTTCGGTCTCTCACTAGGTGTTCACATTATGTTTATGAATGACATTATCCATGAATTTACTGAGTACCTGGACGTTTATGCTTTATCCATCAAGCGCTCCAAGCTGACATAAATCGCACTTTGTATCTACTTTTTTTTATTCGAAAACAAGGCACAACAATCAATCTATCGCCCTGTGAGATTTTCAATCTCAAGTTTGTGTAATAGATAGCGTTATATTATAGAACTATAAAGGTCCTTGAATATACATAGTGTTTCATTCTTATTACTGTATATGTGACTTTACATTGCTACTTCCG < SRR13385771.1220673/301‑1 (MQ=60)
GGTTCGGTCTCTCACTAGGTGTTCACATTATGTTTATGAATGACATTATCCATGAATTTACTGAGTACCTGGACGTTTATGCTTTATCCATCAAGCGCTCCAAGCTGACATAAATCGCACTTTGTATCTACTTTTTTTTATTCGAAAACAAGGCACAACAATCAATCTATCGCCCTGTGAGATTTTCAATCTCAAGTTTGTGTAATAGATAGCGTTATATTATAGAACTATAAAGGTCCTTGAATATACATAGTGTTTCATTCTTATTACTGTATATGTGACTTTACATTTCTACTTCCGC > SRR13385771.717297/1‑301 (MQ=60)
CTCTCACTAGGTGTTCACATTATGTTTATGAATGACATTATCCATGAATTTACTGAGTACCTGGACGTTTATGCTTTATCCATCAAGCGCTCCAAGCTGACATAAATCGCACTTTGTATCTACTTTTTTTTATTCGAAAACAAGGCCCAACAATCAATCTATCGCCCTGTGCGATTTTCAATCTCAAGTTTGTGTCCTAGATAGCGTTCTATTATCGAACTATAAAGGTCCTTGAATATACATAGTGTTTCATTCTTATTACTGTATATGTGACTTTACATTGCTACTTCCGCGGCTATTT > SRR13385771.325712/1‑301 (MQ=60)
CACTAGGTTTTCACATTATGTTTATGAATGACATTATCCATGAATTTACTGAGTACCTGGACGTTTATGCTTTATCCATCAAGCGCTCCAAGCTGACATAAATCGCACTTTGTATCTACTTTTTTTTATTCGACAACAAGGCACAACAATCAATCTATCGCCCTGTGAGATTTTCAATCTCAAGTTTGTGTAATAGATAGCGTTATATTATAGAACTATAAAGGTCCTTGAATATACATAGTGTTTCATTCTTATTACTGTATATGTGACTTTACATTGCTACTTCCGCGGCTATTTGAC < SRR13385771.1067757/300‑1 (MQ=60)
CATTATGTTTATGAATGACATTATCCATGAATTTACTGAGTACCTGGACGTTTATGCTTTATCCATCAAGCGCTCCAAGCTGACATAAATCGCACTTTGTATCTACTTTTTTTTATTCGAAAACAAGGCACAACAATCAATCTATCGCCCTGTGAGATTTTCAATCTCAAGTTTGTGTAATAGATAGCGTTATATTATAGAACTATAAAGGTCCTTGAATATACATAGTGTTTCATTCTTATTACTGTATATGTGACTTTACATTGCTACTTCCGCGGCTATTTGACGTTTTTTGCTCCAG < SRR13385771.1625031/301‑1 (MQ=60)
CATTATCCATGAATTTACTGAGTACCTGGACGTTTATGCTTTATCCATCAAGCGCTCCAAGCTGACCTAAATCGCACTTTGTATCTACTTTTTTTTATTCGAAAACAAGGCACAACAATCAATCTATCGCCCTGTGAGATTTTCAATCTCAAGTTTGTGTAATAGATAGCGTTATATTATAGAACTATAAAGGTCCTTGAATATACATAGTGTTTCATTCTTATTACTGTATATGTGACTTTACATTGCTACTTCCGCGGCTATTTGACGTTTTTTGCTCCAGGTGCGGCTTGGAGGGCA > SRR13385771.1233606/1‑300 (MQ=60)
TTTACTGAGTACCTGGACGTTTATGCTTTATCCATCAAGCGCTCCAAGCTGACATAACTCGCACTTTGTATCTACTTTTTTTTATTCGAAAACAAGGCACAACAATCAATCTATCGCCCTGTGCGATTTTCCATCTCACGTTTGTGTAATAGATAGCGTTATATTATAGAACTATCAAGGTCCTTGAATATACATAGTGTTTCATTCTTATTACTGTATCTGTGACTTTCCATTGCTACTTCCGCGGCTATTTGCCGTTTTTTGCTCCAGGTGCGGCTTGCAGGGCACAGTGTCAGcacat > SRR13385771.10027/1‑296 (MQ=60)
AGTACCTGGACGTTTATGCTTTATCCATCAAGCGCTCCAAGCTGACATAAATCGCACTTTGTATCTACTTTTTTTTATTCGAAAACAAGGCACAACAATCAATCTATCGCCCTGTGAGCTTTTCAATCTCAAGTTTGTGTAATAGATAGCGTTATATTATAGAACTATAAAGGTCCTTGAATATACATAGTGTTTCATTCTTATTACTGTATATGTGACTTTACATTGCTACTTCCGCGGCTATTTGACGTTTTTTGCTCCAGGTGCGGCTTGGAGGGCAAAGTGTCAGAAAATCGGCC > SRR13385771.1326678/1‑299 (MQ=60)
TGCTTTATCCATCAAGCGCTCCAAGCTGACATAAATCGCACTTTGTATCTACTTTTTTTTATTCGAAAACAAGGCACCACAATCAATCTATCGCCCTGTGAGATTTTCAATCTCAAGTTTGTGTAATAGATAGAGTTATCTTATAGAACTATAAAGGTCCTTGAATATACATAGTGTTTCATTCTTCTTACTGTATATGTGACTTTACATTGCTACTTCCGCGGCTCTTTGACGTTTTTTGCTCCAGGTGCGGCTTGGAGGGCCAAGTGTCAGAAAATCGGCCAGGCCGTATGACACAAA > SRR13385771.1630417/1‑300 (MQ=60)
CCATCAAGCGCTCCAAGCTGACATAAATCGCACTTTGTATCTACTTTTTTTTATTCGAAAACAAGGCACAACAATCAATCTATCGCCCTGTGAGATTTTCAATCTCAAGATTGTGTAATAGATAGCGTTATATTATAGAACTATAAAGGTCCTTGAATATACATAGTGTTTCATTCTTATTACTGTATATGTGACTTTACATTGCTACGTCCGCGGCTATTTGACGTTTTTTGCTCCAGGTGCGGCTTGGAGGGCAAAGTGTCAGAAAATCGGCCAGGCCGTATGACACAAAAGAGTAGA < SRR13385771.1594042/300‑1 (MQ=60)
CATCAAGCGCTCCAAGCTGACATAAATCGCACTTTGTATCTACTTTTTTTTATTCGAAAACAAGGCACAACAATCAATCTATCGCCCTGTGAGATTTTCAATCTCAAGTTTGTGTAATAGATAGCGTTATATTATAGAACTATAAAGGTCCTTGAATATACATAGTGTTTCATTCTTATTACTGTATATGTGACTTTACATTGCTACTTCCGCGGCTATTTGACGTTTTTTGCTCCAGGTGCGGCTTGGAGGGCAAAGTGTCAGAAAATCGGCCAGGCCGTATGACACAAAAGAGTAGAAA < SRR13385771.596876/301‑1 (MQ=60)
CAAGCGCTCCAAGCTGACATAAATCGCACTTTGTATCTACTTTTTTTTATTCGAAAACAAGGCACAACAATCAATCTATCGCCCTGTGAGATTTTCAATCTCAAGTTTGTGTAATAGATAGCGTTATATTATAGAACTATAAAGGTCCTTGAATATACATAGTGTTTCATTCTTATTACTGTATATGTGACTTTACATTGCTACTTCCGCGGCTATTTGACGTTTTTTGCTCCAGGTGCGGCTTGGAGGGCAAAGTGTCAGAAAATCGGCCAGGCCGTATGACACAAAAGAGTAGAAAACG < SRR13385771.340923/301‑1 (MQ=60)
CAAGCGCTCCAAGCTGACATAAATCGCACTTTGTATCTACTTTTTTTTATTCGAAAACAAGGCACAACAATCAATCTATCGCCCTGTGAGATTTTCAATCTCAAGTTTGTGTAATAGATAGCGTTATATTATAGAACTATAAAGGTCCTTGAATATACATAGTGTTTCATTCTTATTACTGTATATGTGACTTTACATTGCTACTTCCGCGGCTATTTGACGTTTTTTGCTCCAGGTGCGGCTTGGAGGGCAAAGTGTCAGAAAATCGGCCAGGCCGTATGACACAAAAGAGTAGAAAACG < SRR13385771.1704855/301‑1 (MQ=60)
CTGACATAAATCGCACTTTGTATCTACTTTTTTTTATTCGAAAACAAGGCACAACAATCAATCTATCGCCCTGTGAGATTTTCAATCTCAAGTTTGTGTAATAGATAGCGTTATATTATAGAACTATAAAGGTCCTTGAATATACATAGTGTTTCATTCTTATTACTGTATATGTGACTTTACATTGCTACTTCCGCGGCTATTTGACGTTTTTTGCTCCAGGTGCGGCTTGGAGGGCAAAGTGTCAGAAAATCGGCCAGGCCGTATGACACAAAAGAGTAGAAAACGAGATCTCAAATAT > SRR13385771.351115/1‑301 (MQ=60)
ACTTTGTATCTACTTTTTTTTATTCGAAAACAAGGCACAACAATCAATCTATCGCCCTGTGAGATTTTCAATCTCAAGTTTGTGTAATAGATAGCGTTATATTATAGAACTATAAAGGTCCTTGAATATACATAGTGTTTCATTCTTATTACTGTATATGTGACTTTACATTGCTACTTCCGCGGCTATTTGACGTTTTTTGCTCCAGGTGCGGCTTGGAGGGCAAAGTGTCAGAAAATCGGCCAGGCCGTATGACACAAAAGAGTAGAAAACGAGATCTCAAATATCTCGAGGCCTGTCC > SRR13385771.1552014/1‑301 (MQ=60)
CTTTTTTTTATTCGAAAACAAGGCACAACAATCAATCTATCGCCCTGTGAGATTTTCAATCTCAAGTTTGTGTAATAGATAGCGTTATATTATAGAACTATAAAGGTCCTTGAATATACATAGTGTTTCATTCTTATTACTGTATATGTGACTTTACATTGCTACTTCCGCGGCTATTTGCCGTTTTTTGCTCCAGGTGCGGCTTGGAGGGCAAAGTGTCAGAAAATCGGCCAGGCCGTATGACACAAAAGAGTAGAAAACGAGATCTCAAATATCTAGAGGACTGTCCTCTATACACCC > SRR13385771.759872/1‑300 (MQ=60)
ATTCGAAAACAAGGCACAACAATCAATCGATCGCCCTGTGAGATTTTCAATCTCAAGTTTGTGTAATAGATAGCGTTATATTAGAGAACTATAAAGGTCCTTGAATATACATAGTGTTTCATTCTTATTACTGTATATGTGACTTTACATTGCTACTTCCGCGGCTATTTGACGTTTTTTGCTCCAGGTGCGGCTTGGAGGGCAAAGTGTCAGAAAATCGGCCAGGCCGTATGACACAAAAGAGTAGAAAACGAGATCTCAAATATCTCGAGGCCTGGCCTCTATACAACCACCCAGCTC < SRR13385771.168869/300‑1 (MQ=60)
CGAAAACAAGGCACAACAATCAATCTATCGCCCTGTGAGATTTTCAAGCTCAAGTGTGTGTAATAGATAGCGTTATATTATAGAACTATAAAGGTCCTTGAATATACATAGTGTTTCATTCTTATTACTGTATATGTGACTTTACATTGCTACTTCCGCGGCTATTTGACGTTTTTTGCTCCAGGTGCGGCTTGGAGGGCAAAGTGTCAGAAAATCGGCCAGGCCGTATGACACAAAAGAGTAGAAAACGAGATCTCAAATATCTCGAGGCCTGTCCTCTATACAACCACCCAGCTCTCT < SRR13385771.1357803/300‑1 (MQ=60)
AAACAAGGCACAACAATCAATCTATCGCCCTGTGAGATTTTCAATCTCAGGTTTGTGTAATAGATAGCGTTATATTATAGAACTATAAAGGTCCTTGAATATACATAGTGTTTCATTCTTATTACTGTATATGTGACTTTACATTGCTACTTCCGCGGCTATTTGACGTTTTTTGCTCCAGGTGCGGCTTGGAGGGCAAAGTGTCAGAAAATCGGCCAGGCCGTATGACACAAAAGAGTAGAAAACGAGATCTCAAATATCTCGAGGCCTGTCCTCTATACAACCACCCAGCTCTCTGAC > SRR13385771.1185766/1‑300 (MQ=60)
ATCTCAAGTTTGTGTAATAGATAGCGTTATATTATAGAACTATAAAGGTCCTTGAATATACATAGTGTTTCATTCTTATTACTGTATATGTGACTTTACATTGCTACTTCCGCGGCTATTTGACGTTTTTTGCTCCAGTTGCGGCTTGGAGGGCAAAGTGTCAGAAAATCGGCCAGGCCGTATGACACAAAAGAGTAGAAAACGAGATCGCAAATATCTCGAGGCCTGTCCTCTATACAACCACCCAGCTCTCTGACAAAGCTCCAGAACGGTTGTTTTTCGTTTCCAAAAGCCAAGGGCC > SRR13385771.908590/1‑301 (MQ=60)
TCTCAAGTTTGTGTAATAGATAGCGTTATATTATAGAACTATAAAGGTCCTTGAATATACATAGTGTTTCATTCTTATTACTGTATATGTGACTTTACATTGCTACTTCCGCGGCTATTTGACGTTTTTTGCTCCTGGTGCGGCTTGGAGGGCAAAGTGTCAGAAAATCGGCCAGGCCGTATGACACAAAAGAGTAGAAAACGAGATCTCAAATATCTCGAGGCCTGTCCTCTATACAACCACCCAGCTCTCTGACAAAGCTCCAGAACGGTTGTCTTTTGTTTCGAAAAGCCAAGGTCCC > SRR13385771.842987/1‑301 (MQ=60)
CAAGTTTGTGTAATAGATAGCGTTATATTATAGAACTATAAAGGTCCTTGAATATACATAGAGTTTCATTCTTATTACTGTATATGTGACTTTACATTGCTACTTCCGCGGCTATTTGACGTTTTTTGCTCCAGGTGCGGCTTGGAGGGCAAAGTGTCAGAAAAACGGCCAGGCCGTATGACACAAAAGAGTAGAAAACGAGATCTCAAATATCTCGAGGCCTGTCCTCTATACAACCACCCAGCTCTCTGACAAAGCTCCAGAACGGTTGTCTTTTGTTTCGAAAAGCCAAGGTCCCTT < SRR13385771.1679474/300‑1 (MQ=60)
AAAGTTTGTGTAATAGATAGCGTTATATTATAGAACTATAAAGGTCCTTGAATATACATAGTGTTTCATTCTTATTACTGTATATGTGACTTTACATTGCTACTTCCGCGGCTATTTGACGTTTTTTGCTCCAGGTGCGGCTTGGAGGGCAAAGTGTCAGAAAATAGGCCAGGCCGTATGACACAAAAGAGTAGAAAACGAGATCTCAAATATCTCGAGGCCTGTCCTCTATACAACCACCCAGCTCTCTGACAAAGCTCCAGAACGGTTGTCTTTTGTTTCGAAAAGCCAAGGTCCCTTA < SRR13385771.540972/301‑1 (MQ=60)
AAGTTTGTGTAATAGATAGCGTTATATTATAGAACTATAAAGGTCCTTGAATATACATAGTGTTTCATTCTTATTACTGTATATGTGACTTTACATTGCTACTTCCGCGGCTATTTGACGTTTTTTGCTCCAGGTGCGGCTTGGAGGGCAAAGTGTCAGAAAATCGGCCAGGCCGTATGACACAAAAGAGTAGAAAACGAGATCTCAAATATCTCGAGGCCTGTCCTCTATACAACCACCCAGCTCTCTGACAAAGCTCCAGAACGGTTGTCTTTTGTTTCGAAAAGCCAAGGTCCCTTAT > SRR13385771.1773878/1‑301 (MQ=60)
GTTTGTGTAATAGATAGCGTTATATTATAGAACTATAAAGGTCCTTGAATATACATAGTGTTTCATTCTTATTACTGTATATGTGACTTTACATTGCTACTTCCGCGGCTATTTGACGTTTTTTGCTCCAGGTGCGGCTTGGAGGGCAAAGTGTCAGAAAATCGGCCAGGCCGTATGACACAAAAGAGTAGAAAACGAGATCTCAAATATCTCGAGGCCTGTCCTCTATACAACCACCCAGCTCTCTGACAAAGCTCCAGAACGGTTGTCTTTTGTTTCGAAAAGCCAAGGTCCCTTCTA > SRR13385771.830231/1‑300 (MQ=60)
GTGTAATAGATAGCGTTATATTATAGAACGATAAAGGTCCTTGAATATACATAGTGTTTCATTCTTATTACTGTATATGTGACTTTACATTGCTACGTCCGCGGCTATTTGACGTTTTTTGCTCCAGGTGCGGCTTGGAGGGCAAAGTGTCAGAAAATCGGCCAGGCCGTATGACACAAAAGAGTAGAAAACGAGATCTCAAATATCTCGAGGCCTGTCCTCTATACAACCACCCAGCTCTCTGACAAAGCTCCAGAACGGTTGTCTTTTGTTTCGAAAAGCCAAGGTCCCTTATAATTG < SRR13385771.1643135/300‑1 (MQ=60)
GTAATAGATAGCGTTATATTATAGAACTATAAAGGTCCTTGAATATACATAGTGTTTCATTCTTATTACTGTATATGTGACTTTACATTGCTACTTCCGCGGCTATTTGACGTTTTTTGCTCCAGGTGCGGCTTGGAGGGCAAAGTGTCAGAAAATCGGCCAGGCCGTATGACCCAAAAGAGTAGAAAACGAGATCTCAAATATATCGAGGCCTGTCCTCTATACAACAACCCAGCTCTCTGACACAGCTACAGAAAGGTTGTCTTTTGTTTCGACAAGCCAAGGTCACTTATAATTGTCC > SRR13385771.1163429/1‑301 (MQ=60)
GCGTTATATTATAGAACTATAAAGGTCCTTGAATATACACAGTGTTTCATTCTTATTACTGTATATGTGACTTTACATTGCTACTTCCGCGGCTATTTGACGTTTTTTGCTCCAGGTGCGGCTTGGAGGGCAAAGTGTCAGAAAATCGGCCAGGCCGTATGACACAAAAGAGTAGAAAACGAGATCTCAAATATCTCGAGGCCTGTCCTCTATACAACCACCCAGCTCTCTGACAAAGCTCCAGAACGGTTGTCTTTTGTTTCGAAAAGCCAAGGTCCCTTATAATTGCCCTCCATTTTGT > SRR13385771.450673/1‑301 (MQ=60)
TTATAGAACTATAAAGGTCCTTGAATATACATAGTGTTTCATTCTTATTACTGTATATGTGACTTTACATTGCTACTTCCGCGGCTATTTGACGTTTTTTGCTCCAGGTGCGGCTTGGAGGGCAAAGTGTCAGAAAATCGGCCAGGCCGTATGACACAAAAGAGTAGAAAACGAGATCTCAAATATCTCGAGGCCTGTCCTCTATACAACCACCCAGCTCTCTGACAAAGCTCCAGAACGTTTGTCTTTTGTTTCGAAAAGCCAAGGTCCCTTATAATTGCCCTCCATTTTGTGTCACCTT > SRR13385771.172865/1‑301 (MQ=60)
ACTATAAAGGTCCTTGAATATACATAGTGTTTCATTCTTATTACTGTATATGTGACTTTACATTGCTACTTCCGCGGCTATTTGACGTTTTTTGCTCCAGGTGCGGCTTGGAGGGCAAAGTGTCAGAAAATCGGCCAGGCCGTACGACACAAAAGAGTAGAAAACGAGATCTCAAATATCTCGAGGCCTGTCCTCTATACAACCACCCAGCTCTCTGACAAAGCTCCAGAACGGTTGTCTTTTGTTTCGAAAAGCCAAGGTCCCTTATAATTGCCCTCCATTTTGTGTCACCTATTTAAGC < SRR13385771.1445868/301‑1 (MQ=60)
ATAAAGGTCCTTGAATATACATAGTGTTTCATTCTTATTACTGTATATGTGACTTTACATTGCTCCTTCCGCGGCTATTTGACGTTTTTTGCTCCAGGTGCGGCTTGGAGGGCAAAGTGTCAGAAAATCGGCCAGGCCGTATGACACAAAAGAGTAGAAACCGAGATCTCAAATCTCTCGAGGCCTGTCCTCTATACAACCACCCAGCTCTCTGACAAAGCTCCAGAACGGTTGTCTTTTGTTTCGAAAAGCCAAGGTCCCTTATAATTGCCCTCCATTTTGTGTCACCTATTTAAGC‑A < SRR13385771.568449/299‑1 (MQ=60)
ATAAAGGTCCTTGAATATACATAGTGTTTCATTCTTATTACTGTATATGTGACTTTACATTGCTACTTCCGCGGCTATTTGACGTTTTTTGCTCCAGGTGCGGCTTGGAGGGCAAAGTGTCAGAAAATCGGCCAGGCCGTATGACACAAAAGAGTAGAAAACGAGATCTCAAATATCTCGAGGCCTGTCCTCTATACAACCACCCAGCTCTCTGACAAAGCTCCAGAACGGTTGTCTTTTGTTTCGAAAAGCCAAGGTCCCTTATAATTGCCCTCCATTTTGTGTCACCTATGTAAGC‑AA > SRR13385771.738109/1‑300 (MQ=60)
gagttgcttgaatgtagatgttgtgtcattgttatgacggtgttTGTGACTTTATATTGCTACTTCCGCGGCTATTTGACGTGTTTTGCTCCAGGTGCGGCTTGGAGGGCAAAGTTGGAGAAAATAGGCCAGGCCGTATGACACAAAAGAGTAGAAAACGAGATCTCAAAGATCTCGAGGCCTGTCCTCTATACAGCCAGCCAGCTCTCTGACAAAGCTCCAGAACGGTTGTCTTTTGTTTCGAAAAGCCAAGGTCCCTTATAATTGCCCTCCATTTTGTGTCACCTATTGAAGC‑AAAAAA < SRR13385771.1862012/257‑1 (MQ=60)
GGTCCTTGAATATACATAGTGTTTCATTCTTATTACTGTATATGTGACTTTACATTGCTACTTCCGCGGCTATTTGACGTTTTTTGCTCCAGGTGCGGCTTGGAGGGCAAAGTGTCAGAAAATCGGCCAGGCCGTATGACACAAAAGAGTAGAAAACGAGATCTCAAATATCTCGAGGCCTGTCCTCTATACAACCACCCAGCTCTCTGACAAAGCTCCAGAACGGTTGTCTTTTGTTTCGAAAAGCCAAGGTCCCTTATAATTGCCCTCCATTTTGTGTCACCTATTTAAGC‑AAAAAATT < SRR13385771.1894799/301‑1 (MQ=60)
TCCTTGAATATACATAGTGTTTCATTCTTATTACTGTATATGTGACTTTACATTGCTACTTCCGCGGCTATTTGACGTTTTTTGCTCCAGGTGCGGCTTGGAGGGCAAAGTGTCAGAAAATCGGCCAGGCCGTATGACACAAAAGCGTAGCAAACGAGATATCAAATATATCGAGGCCTGTCCTCTATACAACCACCAAGCTCTCTGACAAAGCTCCAGAACGGTTGTCTTTTGTTTCGAAAAGCCACGGTCCATTATAATTGCCCTCCATTTTGTGTCACCT > SRR13385771.1780574/1‑283 (MQ=60)
TGAATATACATAGTGTTTCATTCTTATTACTGTATATGTGACTTTACATTGCTACTTCCGCGGCTATTTGACGTTTTTTGCTCCAGGTGCGGCTTGGAGGGCAAAGTGTCAGAAAATCGGCCAGGCCGTATGACACAAAAGAGTAGAAAACGAGATCTCAAATATCTCGAGGCCTGTCCTCTATACAACCACCCAGCTCTCTGACAAAGCTCCAGAACGGTTGTCTTTTGTTTCTAAAAGCCAAGGTCCCTTATAATTGCCCTCCATTTTGTGTCACCTATTTAAGCAAAAAAATTGAA > SRR13385771.232632/1‑299 (MQ=60)
GAATATACATAGTGTTTCATTCTTATTACTGTATATGTGACTTTACATTGCTACTTCCGCGGCTATTTGACGTTTTTTGCTCCAGGTGCGGCTTGGAGGGCAAAGTGTCAGAAAATCGGCCAGGCCGTATGACACAAAAGAGTAGAAAACGAGATCTCAAATATCTCGAGGCCTGTCCTCTATACAACCACCCAGCCCTCTGACAAAGCTCCAGCAAGGTTGTCTTTTGTTTCGAAAAGCCAAGGTCCCTTATAATTGACCTCCATTTTGTGTAACCTATTTAAGC‑AAAAAATTGCAAGTT > SRR13385771.1862382/1‑301 (MQ=60)
TTCTTATTACTGTATATGTGACTTTACATTGCTACTTCCGCGGCTATTTGACGTTTTTTGCTCCAGGTGCGGCTTGGAGGGCAAAGTGTCAGAAAATCGGCCAGGCCGTATGACACAAAAGAGTAGAAAACGAGATCTCAAATATCTCGAGGCCTGTCCTCTATACAACCACCCAGCTCTCTGACAAAGCTCCAGAACGGTTGTCTTTTGTTTCGAAAAGCCAAGGTCCCTTATAATTGCCCTCCATTTTGTGTCACCTATTTAAGC‑AAAACATTGACAGTTTACTAACCTTTCATTAAA > SRR13385771.394383/1‑300 (MQ=60)
ATTACTGTATATGTGACTTTACATTGCTACTTCCGCGGCTATTTGACGTTTTTTGCTCCAGGTGCGGCTTGGAGGGCAAAGTGTCAGAAAATCGGCCAGGCCGTATGACACAAAAGAGTAGAAAACGAGATCTCAAATATCTCGAGGCCTGTCCTCTATACAACCACCCAGCTCTCTGACAAAGCTCCAGAACGGTTGTCTTTTGTTTCGAAAAGCCAAGGTCCCTTATAATTGCCCTCCATTTTGTGTCACCTATTTAAGC‑AAAAAATTGAAAGTTTACTAACCTTTCATTAAAGAGAA > SRR13385771.513027/1‑300 (MQ=60)
TGTATATGTGACTTTACATTGCTACTTCCGCGGCTATTTGACGTTTTTTGCTCCAGGTGCGGCTTGGAGGGCAAAGTGTCAGAAAATCGGCCAGGCCGTATGACACAAAAGAGTAGAAAACGAGATCTCAAATATCTCGAGGCCTGTCCTCTATACAACCACCCAGCTCTCTGACAAAGCTCCAGAACGGTTGTCTTTTGTTTCGAAAAGCCAAGGTCCCTTATAATTGCCCTCCATTTTGTGTCACCTATTTAAGC‑AAAAAATTGAAAGTTTACTAACCTTTCATTACAGCGAAATAAC > SRR13385771.74426/1‑300 (MQ=60)
GTATATGTGACTTTACATTGCTACTTCCGCGGCTATTTGACGTTTTTTGCTCCAGGTGCGGCTTGGAGGGCAAAGTGTCAGAAAATCGGCCAGGCCGTATGACACAAAAGAGTAGAAAACGAGATCTCAAATATCTCGAGGCCTGTCCTCTATACAACCACCCAGCTCTCTGACAAAGCTCCAGAACGGTTGTCTTTTGTTTCGAAAAGCCAAGGTCCCTTATAATTGCCCTCCATTTTGTGTCACCTATTTAAGC‑AAAAAATTGAAAGTTTACTAACCTTTCATTAAAGAGAAATAA < SRR13385771.1106938/298‑1 (MQ=60)
TATATGTGACTTTACATTGCTACTTCCGCGGCTATTTGACGTTTTTTGCTCCAGGTGCGGCTTGGAGGGCAAAGTGTCAGAAAATCGGCCAGGCCGTATGACACAAAAGAGTAGAAAACGAGATCTCAAATATCTCGAGGCCTGTCCTCTATACAACCACCCAGCTCTCTGACAAAGCTCCAGAACGGTTGTCTTTTGTTTCGAAAAGCCAAGGTCCCTTATAATTGCCCTCCATTTTGTGTCACCTATTTAAGC‑AAAAAATTGAAAGTTTACTAACCTTTCATTAAAGAGAAATAACAA > SRR13385771.140931/1‑300 (MQ=60)
ATATGTGACTTTACATTGCTACTTCCGCGGCTATTTGACGTTTTTTGCTCCAGGTGCGGCTTGGAGGGCAAAGTGTCAGAAAATCGGCCAGGCCGTATGACACAAAAGAGTAGAAAACGAGATCTCAAATATCTCGAGGCCTGTCCTCTATACAACCACCCAGCTCTATGACAAAGCTACAGCACGGTTGTCTTCTGTTTCGAAAAGCCAAGGTCCCTTATAATTGCACTCCATTTTGAGTCACCTATTTAAGC‑AAAAAATTGAAAGTATACTAACATTTCATTAAAGAaaactaacaca > SRR13385771.1254719/1‑289 (MQ=60)
|
GCTTGGGTTCGGTCTCTCACTAGGTGTTCACATTATGTTTATGAATGACATTATCCATGAATTTACTGAGTACCTGGACGTTTATGCTTTATCCATCAAGCGCTCCAAGCTGACATAAATCGCACTTTGTATCTACTTTTTTTTATTCGAAAACAAGGCACAACAATGAATCTATCGCCCTGTGAGATTTTCAATCTCAAGTTTGTGTAATAGATAGCGTTATATTATAGAACTATAAAGGTCCTTGAATATACATAGTGTTTCATTCCTATTACTGTATATGTGACTTTACATTGTTACTTCCGCGGCTATTTGACGTTTTCTGCTTCAGGTGCGGCTTGGAGGGCAAAGTGTCAGAAAATCGGCCAGGCCGTATGACACAAAAGAGTAGAAAACGAGATCTCAAATATCTCGAGGCCTGTCCTCTATACAACCGCCCAGCTCTCTGACAAAGCTCCAGAACGGTTGTCTTTTGTTTCGAAAAGCCAAGGTCCCTTATAATTGCCCTCCATTTTGTGTCACCTATTTAAGC‑AAAAAATTGAAAGTTTACTAACCTTTCATTAAAGAGAAATAACAAT > BK006934/355964‑356541
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
