Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 6081 0.0 0 0.0% 0 0.0

Breseq alignment

N/A

GATK/CNVnator alignment

BRESEQ :: bam2aln output
CATTATGTTTATGAATGACATTATCCATGAATTTACTGAGTACCTGGACGTTTATGCTTTATCCATCAAGCGCTCCAAGCTGACATAAATCGCACTTTGTATCTACTTTTTTTTATTCGAAAACAAGGCACAACAATGAATCTATCGCCCTGTGAGATTTTCAATCTCAAGTTTGTGTAATAGATAGCGTTATATTATAGAACTATAAAGGTCCTTGAATATACATAGTGTTTCATTCCTATTACTGTATATGTGACTTTACATTGTTACTTCCGCGGCTATTTGACGTTTTCTGCTTCAGGTGCGGCTTGGAGGGCAAAGTGTCAGAAAATCGGCCAGGCCGTATGACACAAAAGAGTAGAAAACGAGATCTCAAATATCTCGAGGCCTGTCCTCTATACAACCGCCCAGCTCTCTGACAAAGCTCCAGAACGGTTGTCTTTTGTTTCGAAAAGCCAAGGTCCCTTATAATTGCCCTCCATTTTGTGTCACCTATTTAAGC‑AAAAAATTGAAAGTTTACTAACCTTTCATTAAAGAGAAATAACAATATTATAAAAAGCGCTTAAAATGAATGAAATGGAAAACA  >  BK006934/355994‑356579
                                                                                                                                                                                                                                                                                                         |                                                                                                                                                                                                                                                                                                 
CATTATGTTTATGAATGACATTATCCATGAATTTACTGAGTACCTGGACGTTTATGCTTTATCCATCAAGCGCTCCAAGCTGACATAAATCGCACTTTGTATCTACTTTTTTTTATTCGAAAACAAGGCACAACAATCAATCTATCGCCCTGTGAGATTTTCAATCTCAAGTTTGTGTAATAGATAGCGTTATATTATAGAACTATAAAGGTCCTTGAATATACATAGTGTTTCATTCTTATTACTGTATATGTGACTTTACATTGCTACTTCCGCGGCTATTTGACGTTTTTTGCTCCAG                                                                                                                                                                                                                                                                                                <  SRR13385771.1625031/301‑1 (MQ=60)
                  CATTATCCATGAATTTACTGAGTACCTGGACGTTTATGCTTTATCCATCAAGCGCTCCAAGCTGACCTAAATCGCACTTTGTATCTACTTTTTTTTATTCGAAAACAAGGCACAACAATCAATCTATCGCCCTGTGAGATTTTCAATCTCAAGTTTGTGTAATAGATAGCGTTATATTATAGAACTATAAAGGTCCTTGAATATACATAGTGTTTCATTCTTATTACTGTATATGTGACTTTACATTGCTACTTCCGCGGCTATTTGACGTTTTTTGCTCCAGGTGCGGCTTGGAGGGCA                                                                                                                                                                                                                                                                               >  SRR13385771.1233606/1‑300 (MQ=60)
                               TTTACTGAGTACCTGGACGTTTATGCTTTATCCATCAAGCGCTCCAAGCTGACATAACTCGCACTTTGTATCTACTTTTTTTTATTCGAAAACAAGGCACAACAATCAATCTATCGCCCTGTGCGATTTTCCATCTCACGTTTGTGTAATAGATAGCGTTATATTATAGAACTATCAAGGTCCTTGAATATACATAGTGTTTCATTCTTATTACTGTATCTGTGACTTTCCATTGCTACTTCCGCGGCTATTTGCCGTTTTTTGCTCCAGGTGCGGCTTGCAGGGCACAGTGTCAGcacat                                                                                                                                                                                                                                                                 >  SRR13385771.10027/1‑296 (MQ=60)
                                      AGTACCTGGACGTTTATGCTTTATCCATCAAGCGCTCCAAGCTGACATAAATCGCACTTTGTATCTACTTTTTTTTATTCGAAAACAAGGCACAACAATCAATCTATCGCCCTGTGAGCTTTTCAATCTCAAGTTTGTGTAATAGATAGCGTTATATTATAGAACTATAAAGGTCCTTGAATATACATAGTGTTTCATTCTTATTACTGTATATGTGACTTTACATTGCTACTTCCGCGGCTATTTGACGTTTTTTGCTCCAGGTGCGGCTTGGAGGGCAAAGTGTCAGAAAATCGGCC                                                                                                                                                                                                                                                            >  SRR13385771.1326678/1‑299 (MQ=60)
                                                      TGCTTTATCCATCAAGCGCTCCAAGCTGACATAAATCGCACTTTGTATCTACTTTTTTTTATTCGAAAACAAGGCACCACAATCAATCTATCGCCCTGTGAGATTTTCAATCTCAAGTTTGTGTAATAGATAGAGTTATCTTATAGAACTATAAAGGTCCTTGAATATACATAGTGTTTCATTCTTCTTACTGTATATGTGACTTTACATTGCTACTTCCGCGGCTCTTTGACGTTTTTTGCTCCAGGTGCGGCTTGGAGGGCCAAGTGTCAGAAAATCGGCCAGGCCGTATGACACAAA                                                                                                                                                                                                                                           >  SRR13385771.1630417/1‑300 (MQ=60)
                                                              CCATCAAGCGCTCCAAGCTGACATAAATCGCACTTTGTATCTACTTTTTTTTATTCGAAAACAAGGCACAACAATCAATCTATCGCCCTGTGAGATTTTCAATCTCAAGATTGTGTAATAGATAGCGTTATATTATAGAACTATAAAGGTCCTTGAATATACATAGTGTTTCATTCTTATTACTGTATATGTGACTTTACATTGCTACGTCCGCGGCTATTTGACGTTTTTTGCTCCAGGTGCGGCTTGGAGGGCAAAGTGTCAGAAAATCGGCCAGGCCGTATGACACAAAAGAGTAGA                                                                                                                                                                                                                                   <  SRR13385771.1594042/300‑1 (MQ=60)
                                                               CATCAAGCGCTCCAAGCTGACATAAATCGCACTTTGTATCTACTTTTTTTTATTCGAAAACAAGGCACAACAATCAATCTATCGCCCTGTGAGATTTTCAATCTCAAGTTTGTGTAATAGATAGCGTTATATTATAGAACTATAAAGGTCCTTGAATATACATAGTGTTTCATTCTTATTACTGTATATGTGACTTTACATTGCTACTTCCGCGGCTATTTGACGTTTTTTGCTCCAGGTGCGGCTTGGAGGGCAAAGTGTCAGAAAATCGGCCAGGCCGTATGACACAAAAGAGTAGAAA                                                                                                                                                                                                                                 <  SRR13385771.596876/301‑1 (MQ=60)
                                                                  CAAGCGCTCCAAGCTGACATAAATCGCACTTTGTATCTACTTTTTTTTATTCGAAAACAAGGCACAACAATCAATCTATCGCCCTGTGAGATTTTCAATCTCAAGTTTGTGTAATAGATAGCGTTATATTATAGAACTATAAAGGTCCTTGAATATACATAGTGTTTCATTCTTATTACTGTATATGTGACTTTACATTGCTACTTCCGCGGCTATTTGACGTTTTTTGCTCCAGGTGCGGCTTGGAGGGCAAAGTGTCAGAAAATCGGCCAGGCCGTATGACACAAAAGAGTAGAAAACG                                                                                                                                                                                                                              <  SRR13385771.1704855/301‑1 (MQ=60)
                                                                  CAAGCGCTCCAAGCTGACATAAATCGCACTTTGTATCTACTTTTTTTTATTCGAAAACAAGGCACAACAATCAATCTATCGCCCTGTGAGATTTTCAATCTCAAGTTTGTGTAATAGATAGCGTTATATTATAGAACTATAAAGGTCCTTGAATATACATAGTGTTTCATTCTTATTACTGTATATGTGACTTTACATTGCTACTTCCGCGGCTATTTGACGTTTTTTGCTCCAGGTGCGGCTTGGAGGGCAAAGTGTCAGAAAATCGGCCAGGCCGTATGACACAAAAGAGTAGAAAACG                                                                                                                                                                                                                              <  SRR13385771.340923/301‑1 (MQ=60)
                                                                               CTGACATAAATCGCACTTTGTATCTACTTTTTTTTATTCGAAAACAAGGCACAACAATCAATCTATCGCCCTGTGAGATTTTCAATCTCAAGTTTGTGTAATAGATAGCGTTATATTATAGAACTATAAAGGTCCTTGAATATACATAGTGTTTCATTCTTATTACTGTATATGTGACTTTACATTGCTACTTCCGCGGCTATTTGACGTTTTTTGCTCCAGGTGCGGCTTGGAGGGCAAAGTGTCAGAAAATCGGCCAGGCCGTATGACACAAAAGAGTAGAAAACGAGATCTCAAATAT                                                                                                                                                                                                                 >  SRR13385771.351115/1‑301 (MQ=60)
                                                                                             ACTTTGTATCTACTTTTTTTTATTCGAAAACAAGGCACAACAATCAATCTATCGCCCTGTGAGATTTTCAATCTCAAGTTTGTGTAATAGATAGCGTTATATTATAGAACTATAAAGGTCCTTGAATATACATAGTGTTTCATTCTTATTACTGTATATGTGACTTTACATTGCTACTTCCGCGGCTATTTGACGTTTTTTGCTCCAGGTGCGGCTTGGAGGGCAAAGTGTCAGAAAATCGGCCAGGCCGTATGACACAAAAGAGTAGAAAACGAGATCTCAAATATCTCGAGGCCTGTCC                                                                                                                                                                                                   >  SRR13385771.1552014/1‑301 (MQ=60)
                                                                                                         CTTTTTTTTATTCGAAAACAAGGCACAACAATCAATCTATCGCCCTGTGAGATTTTCAATCTCAAGTTTGTGTAATAGATAGCGTTATATTATAGAACTATAAAGGTCCTTGAATATACATAGTGTTTCATTCTTATTACTGTATATGTGACTTTACATTGCTACTTCCGCGGCTATTTGCCGTTTTTTGCTCCAGGTGCGGCTTGGAGGGCAAAGTGTCAGAAAATCGGCCAGGCCGTATGACACAAAAGAGTAGAAAACGAGATCTCAAATATCTAGAGGACTGTCCTCTATACACCC                                                                                                                                                                                        >  SRR13385771.759872/1‑300 (MQ=60)
                                                                                                                  ATTCGAAAACAAGGCACAACAATCAATCGATCGCCCTGTGAGATTTTCAATCTCAAGTTTGTGTAATAGATAGCGTTATATTAGAGAACTATAAAGGTCCTTGAATATACATAGTGTTTCATTCTTATTACTGTATATGTGACTTTACATTGCTACTTCCGCGGCTATTTGACGTTTTTTGCTCCAGGTGCGGCTTGGAGGGCAAAGTGTCAGAAAATCGGCCAGGCCGTATGACACAAAAGAGTAGAAAACGAGATCTCAAATATCTCGAGGCCTGGCCTCTATACAACCACCCAGCTC                                                                                                                                                                               <  SRR13385771.168869/300‑1 (MQ=60)
                                                                                                                     CGAAAACAAGGCACAACAATCAATCTATCGCCCTGTGAGATTTTCAAGCTCAAGTGTGTGTAATAGATAGCGTTATATTATAGAACTATAAAGGTCCTTGAATATACATAGTGTTTCATTCTTATTACTGTATATGTGACTTTACATTGCTACTTCCGCGGCTATTTGACGTTTTTTGCTCCAGGTGCGGCTTGGAGGGCAAAGTGTCAGAAAATCGGCCAGGCCGTATGACACAAAAGAGTAGAAAACGAGATCTCAAATATCTCGAGGCCTGTCCTCTATACAACCACCCAGCTCTCT                                                                                                                                                                            <  SRR13385771.1357803/300‑1 (MQ=60)
                                                                                                                        AAACAAGGCACAACAATCAATCTATCGCCCTGTGAGATTTTCAATCTCAGGTTTGTGTAATAGATAGCGTTATATTATAGAACTATAAAGGTCCTTGAATATACATAGTGTTTCATTCTTATTACTGTATATGTGACTTTACATTGCTACTTCCGCGGCTATTTGACGTTTTTTGCTCCAGGTGCGGCTTGGAGGGCAAAGTGTCAGAAAATCGGCCAGGCCGTATGACACAAAAGAGTAGAAAACGAGATCTCAAATATCTCGAGGCCTGTCCTCTATACAACCACCCAGCTCTCTGAC                                                                                                                                                                         >  SRR13385771.1185766/1‑300 (MQ=60)
                                                                                                                                                                   ATCTCAAGTTTGTGTAATAGATAGCGTTATATTATAGAACTATAAAGGTCCTTGAATATACATAGTGTTTCATTCTTATTACTGTATATGTGACTTTACATTGCTACTTCCGCGGCTATTTGACGTTTTTTGCTCCAGTTGCGGCTTGGAGGGCAAAGTGTCAGAAAATCGGCCAGGCCGTATGACACAAAAGAGTAGAAAACGAGATCGCAAATATCTCGAGGCCTGTCCTCTATACAACCACCCAGCTCTCTGACAAAGCTCCAGAACGGTTGTTTTTCGTTTCCAAAAGCCAAGGGCC                                                                                                                             >  SRR13385771.908590/1‑301 (MQ=60)
                                                                                                                                                                    TCTCAAGTTTGTGTAATAGATAGCGTTATATTATAGAACTATAAAGGTCCTTGAATATACATAGTGTTTCATTCTTATTACTGTATATGTGACTTTACATTGCTACTTCCGCGGCTATTTGACGTTTTTTGCTCCTGGTGCGGCTTGGAGGGCAAAGTGTCAGAAAATCGGCCAGGCCGTATGACACAAAAGAGTAGAAAACGAGATCTCAAATATCTCGAGGCCTGTCCTCTATACAACCACCCAGCTCTCTGACAAAGCTCCAGAACGGTTGTCTTTTGTTTCGAAAAGCCAAGGTCCC                                                                                                                            >  SRR13385771.842987/1‑301 (MQ=60)
                                                                                                                                                                       CAAGTTTGTGTAATAGATAGCGTTATATTATAGAACTATAAAGGTCCTTGAATATACATAGAGTTTCATTCTTATTACTGTATATGTGACTTTACATTGCTACTTCCGCGGCTATTTGACGTTTTTTGCTCCAGGTGCGGCTTGGAGGGCAAAGTGTCAGAAAAACGGCCAGGCCGTATGACACAAAAGAGTAGAAAACGAGATCTCAAATATCTCGAGGCCTGTCCTCTATACAACCACCCAGCTCTCTGACAAAGCTCCAGAACGGTTGTCTTTTGTTTCGAAAAGCCAAGGTCCCTT                                                                                                                          <  SRR13385771.1679474/300‑1 (MQ=60)
                                                                                                                                                                       AAAGTTTGTGTAATAGATAGCGTTATATTATAGAACTATAAAGGTCCTTGAATATACATAGTGTTTCATTCTTATTACTGTATATGTGACTTTACATTGCTACTTCCGCGGCTATTTGACGTTTTTTGCTCCAGGTGCGGCTTGGAGGGCAAAGTGTCAGAAAATAGGCCAGGCCGTATGACACAAAAGAGTAGAAAACGAGATCTCAAATATCTCGAGGCCTGTCCTCTATACAACCACCCAGCTCTCTGACAAAGCTCCAGAACGGTTGTCTTTTGTTTCGAAAAGCCAAGGTCCCTTA                                                                                                                         <  SRR13385771.540972/301‑1 (MQ=60)
                                                                                                                                                                        AAGTTTGTGTAATAGATAGCGTTATATTATAGAACTATAAAGGTCCTTGAATATACATAGTGTTTCATTCTTATTACTGTATATGTGACTTTACATTGCTACTTCCGCGGCTATTTGACGTTTTTTGCTCCAGGTGCGGCTTGGAGGGCAAAGTGTCAGAAAATCGGCCAGGCCGTATGACACAAAAGAGTAGAAAACGAGATCTCAAATATCTCGAGGCCTGTCCTCTATACAACCACCCAGCTCTCTGACAAAGCTCCAGAACGGTTGTCTTTTGTTTCGAAAAGCCAAGGTCCCTTAT                                                                                                                        >  SRR13385771.1773878/1‑301 (MQ=60)
                                                                                                                                                                          GTTTGTGTAATAGATAGCGTTATATTATAGAACTATAAAGGTCCTTGAATATACATAGTGTTTCATTCTTATTACTGTATATGTGACTTTACATTGCTACTTCCGCGGCTATTTGACGTTTTTTGCTCCAGGTGCGGCTTGGAGGGCAAAGTGTCAGAAAATCGGCCAGGCCGTATGACACAAAAGAGTAGAAAACGAGATCTCAAATATCTCGAGGCCTGTCCTCTATACAACCACCCAGCTCTCTGACAAAGCTCCAGAACGGTTGTCTTTTGTTTCGAAAAGCCAAGGTCCCTTCTA                                                                                                                       >  SRR13385771.830231/1‑300 (MQ=60)
                                                                                                                                                                              GTGTAATAGATAGCGTTATATTATAGAACGATAAAGGTCCTTGAATATACATAGTGTTTCATTCTTATTACTGTATATGTGACTTTACATTGCTACGTCCGCGGCTATTTGACGTTTTTTGCTCCAGGTGCGGCTTGGAGGGCAAAGTGTCAGAAAATCGGCCAGGCCGTATGACACAAAAGAGTAGAAAACGAGATCTCAAATATCTCGAGGCCTGTCCTCTATACAACCACCCAGCTCTCTGACAAAGCTCCAGAACGGTTGTCTTTTGTTTCGAAAAGCCAAGGTCCCTTATAATTG                                                                                                                   <  SRR13385771.1643135/300‑1 (MQ=60)
                                                                                                                                                                                GTAATAGATAGCGTTATATTATAGAACTATAAAGGTCCTTGAATATACATAGTGTTTCATTCTTATTACTGTATATGTGACTTTACATTGCTACTTCCGCGGCTATTTGACGTTTTTTGCTCCAGGTGCGGCTTGGAGGGCAAAGTGTCAGAAAATCGGCCAGGCCGTATGACCCAAAAGAGTAGAAAACGAGATCTCAAATATATCGAGGCCTGTCCTCTATACAACAACCCAGCTCTCTGACACAGCTACAGAAAGGTTGTCTTTTGTTTCGACAAGCCAAGGTCACTTATAATTGTCC                                                                                                                >  SRR13385771.1163429/1‑301 (MQ=60)
                                                                                                                                                                                          GCGTTATATTATAGAACTATAAAGGTCCTTGAATATACACAGTGTTTCATTCTTATTACTGTATATGTGACTTTACATTGCTACTTCCGCGGCTATTTGACGTTTTTTGCTCCAGGTGCGGCTTGGAGGGCAAAGTGTCAGAAAATCGGCCAGGCCGTATGACACAAAAGAGTAGAAAACGAGATCTCAAATATCTCGAGGCCTGTCCTCTATACAACCACCCAGCTCTCTGACAAAGCTCCAGAACGGTTGTCTTTTGTTTCGAAAAGCCAAGGTCCCTTATAATTGCCCTCCATTTTGT                                                                                                      >  SRR13385771.450673/1‑301 (MQ=60)
                                                                                                                                                                                                  TTATAGAACTATAAAGGTCCTTGAATATACATAGTGTTTCATTCTTATTACTGTATATGTGACTTTACATTGCTACTTCCGCGGCTATTTGACGTTTTTTGCTCCAGGTGCGGCTTGGAGGGCAAAGTGTCAGAAAATCGGCCAGGCCGTATGACACAAAAGAGTAGAAAACGAGATCTCAAATATCTCGAGGCCTGTCCTCTATACAACCACCCAGCTCTCTGACAAAGCTCCAGAACGTTTGTCTTTTGTTTCGAAAAGCCAAGGTCCCTTATAATTGCCCTCCATTTTGTGTCACCTT                                                                                              >  SRR13385771.172865/1‑301 (MQ=60)
                                                                                                                                                                                                         ACTATAAAGGTCCTTGAATATACATAGTGTTTCATTCTTATTACTGTATATGTGACTTTACATTGCTACTTCCGCGGCTATTTGACGTTTTTTGCTCCAGGTGCGGCTTGGAGGGCAAAGTGTCAGAAAATCGGCCAGGCCGTACGACACAAAAGAGTAGAAAACGAGATCTCAAATATCTCGAGGCCTGTCCTCTATACAACCACCCAGCTCTCTGACAAAGCTCCAGAACGGTTGTCTTTTGTTTCGAAAAGCCAAGGTCCCTTATAATTGCCCTCCATTTTGTGTCACCTATTTAAGC                                                                                       <  SRR13385771.1445868/301‑1 (MQ=60)
                                                                                                                                                                                                            ATAAAGGTCCTTGAATATACATAGTGTTTCATTCTTATTACTGTATATGTGACTTTACATTGCTCCTTCCGCGGCTATTTGACGTTTTTTGCTCCAGGTGCGGCTTGGAGGGCAAAGTGTCAGAAAATCGGCCAGGCCGTATGACACAAAAGAGTAGAAACCGAGATCTCAAATCTCTCGAGGCCTGTCCTCTATACAACCACCCAGCTCTCTGACAAAGCTCCAGAACGGTTGTCTTTTGTTTCGAAAAGCCAAGGTCCCTTATAATTGCCCTCCATTTTGTGTCACCTATTTAAGC‑A                                                                                     <  SRR13385771.568449/299‑1 (MQ=60)
                                                                                                                                                                                                            ATAAAGGTCCTTGAATATACATAGTGTTTCATTCTTATTACTGTATATGTGACTTTACATTGCTACTTCCGCGGCTATTTGACGTTTTTTGCTCCAGGTGCGGCTTGGAGGGCAAAGTGTCAGAAAATCGGCCAGGCCGTATGACACAAAAGAGTAGAAAACGAGATCTCAAATATCTCGAGGCCTGTCCTCTATACAACCACCCAGCTCTCTGACAAAGCTCCAGAACGGTTGTCTTTTGTTTCGAAAAGCCAAGGTCCCTTATAATTGCCCTCCATTTTGTGTCACCTATGTAAGC‑AA                                                                                    >  SRR13385771.738109/1‑300 (MQ=60)
                                                                                                                                                                                                               gagttgcttgaatgtagatgttgtgtcattgttatgacggtgttTGTGACTTTATATTGCTACTTCCGCGGCTATTTGACGTGTTTTGCTCCAGGTGCGGCTTGGAGGGCAAAGTTGGAGAAAATAGGCCAGGCCGTATGACACAAAAGAGTAGAAAACGAGATCTCAAAGATCTCGAGGCCTGTCCTCTATACAGCCAGCCAGCTCTCTGACAAAGCTCCAGAACGGTTGTCTTTTGTTTCGAAAAGCCAAGGTCCCTTATAATTGCCCTCCATTTTGTGTCACCTATTGAAGC‑AAAAAA                                                                                <  SRR13385771.1862012/257‑1 (MQ=60)
                                                                                                                                                                                                                 GGTCCTTGAATATACATAGTGTTTCATTCTTATTACTGTATATGTGACTTTACATTGCTACTTCCGCGGCTATTTGACGTTTTTTGCTCCAGGTGCGGCTTGGAGGGCAAAGTGTCAGAAAATCGGCCAGGCCGTATGACACAAAAGAGTAGAAAACGAGATCTCAAATATCTCGAGGCCTGTCCTCTATACAACCACCCAGCTCTCTGACAAAGCTCCAGAACGGTTGTCTTTTGTTTCGAAAAGCCAAGGTCCCTTATAATTGCCCTCCATTTTGTGTCACCTATTTAAGC‑AAAAAATT                                                                              <  SRR13385771.1894799/301‑1 (MQ=60)
                                                                                                                                                                                                                   TCCTTGAATATACATAGTGTTTCATTCTTATTACTGTATATGTGACTTTACATTGCTACTTCCGCGGCTATTTGACGTTTTTTGCTCCAGGTGCGGCTTGGAGGGCAAAGTGTCAGAAAATCGGCCAGGCCGTATGACACAAAAGCGTAGCAAACGAGATATCAAATATATCGAGGCCTGTCCTCTATACAACCACCAAGCTCTCTGACAAAGCTCCAGAACGGTTGTCTTTTGTTTCGAAAAGCCACGGTCCATTATAATTGCCCTCCATTTTGTGTCACCT                                                                                               >  SRR13385771.1780574/1‑283 (MQ=60)
                                                                                                                                                                                                                       TGAATATACATAGTGTTTCATTCTTATTACTGTATATGTGACTTTACATTGCTACTTCCGCGGCTATTTGACGTTTTTTGCTCCAGGTGCGGCTTGGAGGGCAAAGTGTCAGAAAATCGGCCAGGCCGTATGACACAAAAGAGTAGAAAACGAGATCTCAAATATCTCGAGGCCTGTCCTCTATACAACCACCCAGCTCTCTGACAAAGCTCCAGAACGGTTGTCTTTTGTTTCTAAAAGCCAAGGTCCCTTATAATTGCCCTCCATTTTGTGTCACCTATTTAAGCAAAAAAATTGAA                                                                           >  SRR13385771.232632/1‑299 (MQ=60)
                                                                                                                                                                                                                        GAATATACATAGTGTTTCATTCTTATTACTGTATATGTGACTTTACATTGCTACTTCCGCGGCTATTTGACGTTTTTTGCTCCAGGTGCGGCTTGGAGGGCAAAGTGTCAGAAAATCGGCCAGGCCGTATGACACAAAAGAGTAGAAAACGAGATCTCAAATATCTCGAGGCCTGTCCTCTATACAACCACCCAGCCCTCTGACAAAGCTCCAGCAAGGTTGTCTTTTGTTTCGAAAAGCCAAGGTCCCTTATAATTGACCTCCATTTTGTGTAACCTATTTAAGC‑AAAAAATTGCAAGTT                                                                       >  SRR13385771.1862382/1‑301 (MQ=60)
                                                                                                                                                                                                                                           TTCTTATTACTGTATATGTGACTTTACATTGCTACTTCCGCGGCTATTTGACGTTTTTTGCTCCAGGTGCGGCTTGGAGGGCAAAGTGTCAGAAAATCGGCCAGGCCGTATGACACAAAAGAGTAGAAAACGAGATCTCAAATATCTCGAGGCCTGTCCTCTATACAACCACCCAGCTCTCTGACAAAGCTCCAGAACGGTTGTCTTTTGTTTCGAAAAGCCAAGGTCCCTTATAATTGCCCTCCATTTTGTGTCACCTATTTAAGC‑AAAACATTGACAGTTTACTAACCTTTCATTAAA                                                     >  SRR13385771.394383/1‑300 (MQ=60)
                                                                                                                                                                                                                                                ATTACTGTATATGTGACTTTACATTGCTACTTCCGCGGCTATTTGACGTTTTTTGCTCCAGGTGCGGCTTGGAGGGCAAAGTGTCAGAAAATCGGCCAGGCCGTATGACACAAAAGAGTAGAAAACGAGATCTCAAATATCTCGAGGCCTGTCCTCTATACAACCACCCAGCTCTCTGACAAAGCTCCAGAACGGTTGTCTTTTGTTTCGAAAAGCCAAGGTCCCTTATAATTGCCCTCCATTTTGTGTCACCTATTTAAGC‑AAAAAATTGAAAGTTTACTAACCTTTCATTAAAGAGAA                                                >  SRR13385771.513027/1‑300 (MQ=60)
                                                                                                                                                                                                                                                     TGTATATGTGACTTTACATTGCTACTTCCGCGGCTATTTGACGTTTTTTGCTCCAGGTGCGGCTTGGAGGGCAAAGTGTCAGAAAATCGGCCAGGCCGTATGACACAAAAGAGTAGAAAACGAGATCTCAAATATCTCGAGGCCTGTCCTCTATACAACCACCCAGCTCTCTGACAAAGCTCCAGAACGGTTGTCTTTTGTTTCGAAAAGCCAAGGTCCCTTATAATTGCCCTCCATTTTGTGTCACCTATTTAAGC‑AAAAAATTGAAAGTTTACTAACCTTTCATTACAGCGAAATAAC                                           >  SRR13385771.74426/1‑300 (MQ=60)
                                                                                                                                                                                                                                                      GTATATGTGACTTTACATTGCTACTTCCGCGGCTATTTGACGTTTTTTGCTCCAGGTGCGGCTTGGAGGGCAAAGTGTCAGAAAATCGGCCAGGCCGTATGACACAAAAGAGTAGAAAACGAGATCTCAAATATCTCGAGGCCTGTCCTCTATACAACCACCCAGCTCTCTGACAAAGCTCCAGAACGGTTGTCTTTTGTTTCGAAAAGCCAAGGTCCCTTATAATTGCCCTCCATTTTGTGTCACCTATTTAAGC‑AAAAAATTGAAAGTTTACTAACCTTTCATTAAAGAGAAATAA                                            <  SRR13385771.1106938/298‑1 (MQ=60)
                                                                                                                                                                                                                                                       TATATGTGACTTTACATTGCTACTTCCGCGGCTATTTGACGTTTTTTGCTCCAGGTGCGGCTTGGAGGGCAAAGTGTCAGAAAATCGGCCAGGCCGTATGACACAAAAGAGTAGAAAACGAGATCTCAAATATCTCGAGGCCTGTCCTCTATACAACCACCCAGCTCTCTGACAAAGCTCCAGAACGGTTGTCTTTTGTTTCGAAAAGCCAAGGTCCCTTATAATTGCCCTCCATTTTGTGTCACCTATTTAAGC‑AAAAAATTGAAAGTTTACTAACCTTTCATTAAAGAGAAATAACAA                                         >  SRR13385771.140931/1‑300 (MQ=60)
                                                                                                                                                                                                                                                        ATATGTGACTTTACATTGCTACTTCCGCGGCTATTTGACGTTTTTTGCTCCAGGTGCGGCTTGGAGGGCAAAGTGTCAGAAAATCGGCCAGGCCGTATGACACAAAAGAGTAGAAAACGAGATCTCAAATATCTCGAGGCCTGTCCTCTATACAACCACCCAGCTCTATGACAAAGCTACAGCACGGTTGTCTTCTGTTTCGAAAAGCCAAGGTCCCTTATAATTGCACTCCATTTTGAGTCACCTATTTAAGC‑AAAAAATTGAAAGTATACTAACATTTCATTAAAGAaaactaacaca                                        >  SRR13385771.1254719/1‑289 (MQ=60)
                                                                                                                                                                                                                                                              gtgtttactttgctcCTTCCGCTGCTATGTGACGTTTTTTGCTCCAGGTGCGGCTTGGAGGGCAAAGTGTCAGAAAATCGGCCAGGCCGTATGACACAAAAGAGTAGAAAACGAGATCTCAAATAGCTCGAGGCCTGTCCTCTATACAACCTCCCAGCTCTCTGACAAAGCTCCAGAACGGTTGTCTTTTGTTTCGAAAAGCCAAGGTCCCTTATAATTGCCCTCCATTTTGTGTCACCTATTTAAGC‑AAAAAATTGAAAGTTTACTAACCTTTCATTAAAGAGAAATAACAATATTATAA                                 <  SRR13385771.1204563/286‑1 (MQ=60)
                                                                                                                                                                                                                                                                                CCGCGGCTATTTGACGGTTTTTGCTCCAGGTGCGGCGTGGAGGGCAAAGTGTCAGAAAATCGGCCAGGCCGTATGACACAAAAGAGTAGAAAACGAGATCTCAAATATCTCGAGGCCTGTCCTCTATACAACCACCCAGCTCTCTGACAAAGCTCCAGAACGGTTGTCTTTTGTTTCGAAAAGCCAAGGTCCCTTATAATTGCCCTCCATTTTGTGTCACCTATTTAAGC‑AAAAAATTGAAAGTTTACTAACCTTTCATTAAAGAGAAATAACAATATTATAAAAAGCGCTTAAAATGAA                <  SRR13385771.350565/300‑1 (MQ=60)
                                                                                                                                                                                                                                                                                           TGACGTTTTTTGCTCCAGGTGCGGCTTGGAGGGCAAAGTGTCAGAAAATCGGCCAGGCCGTATGACACAAAAGAGTAGAAAACGAGATCTCAAATATCTCGAGGCCTGTCCTCTATACAACCACCCAGCTCTCTGACAAAGCTCCAGAACGGTTGTCTTTTGTTTCGAAAAGCCAAGGTCCCTTATAATTGCCCTCCATTTTGTGTCACCTATTTAAGC‑AAAAAATTGAAAGTTTACTAACCTTTCATTAAAGA                                                   <  SRR13385771.553799/254‑1 (MQ=60)
                                                                                                                                                                                                                                                                                             GCGTTTTTTGCTCCAGGTGCGGCTTGGAGGGCAAAGTGTCAGAAAATCGGCCAGGCCGTATGACACAAAAGAGTAGAAAACGAGATCTCAAATATCTCGAGGCCTGTCCTCTATACAACCACCCAGCTCTCTGACAAAGCTCCAGAACGGTTGTCTTTTGTTTCGAAAAGCCAAGGTCCCTTATAATTGCCCTCCATTTTGTGTCACCTATTTAAGC‑AAAAAATTGAAAGTTTACTAACCTTTCATTAAAGAGAAATAACAATATTATAAAAAGCGCTTAAAATGAATGAAATGGAAAACA  <  SRR13385771.661202/301‑1 (MQ=60)
                                                                                                                                                                                                                                                                                                         |                                                                                                                                                                                                                                                                                                 
CATTATGTTTATGAATGACATTATCCATGAATTTACTGAGTACCTGGACGTTTATGCTTTATCCATCAAGCGCTCCAAGCTGACATAAATCGCACTTTGTATCTACTTTTTTTTATTCGAAAACAAGGCACAACAATGAATCTATCGCCCTGTGAGATTTTCAATCTCAAGTTTGTGTAATAGATAGCGTTATATTATAGAACTATAAAGGTCCTTGAATATACATAGTGTTTCATTCCTATTACTGTATATGTGACTTTACATTGTTACTTCCGCGGCTATTTGACGTTTTCTGCTTCAGGTGCGGCTTGGAGGGCAAAGTGTCAGAAAATCGGCCAGGCCGTATGACACAAAAGAGTAGAAAACGAGATCTCAAATATCTCGAGGCCTGTCCTCTATACAACCGCCCAGCTCTCTGACAAAGCTCCAGAACGGTTGTCTTTTGTTTCGAAAAGCCAAGGTCCCTTATAATTGCCCTCCATTTTGTGTCACCTATTTAAGC‑AAAAAATTGAAAGTTTACTAACCTTTCATTAAAGAGAAATAACAATATTATAAAAAGCGCTTAAAATGAATGAAATGGAAAACA  >  BK006934/355994‑356579

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑