Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 6081 0.0 0 0.0% 0 0.0

Breseq alignment

N/A

GATK/CNVnator alignment

BRESEQ :: bam2aln output
TCAAAAAATGGATGCAGAAAATGCAGATAGGGTATATTCGAAAGGGGTCAAGTTGATTGCAAGCGGTACTCTACCATCTGGTATATTTAATAGGGAAGAATTGTTTGAGGAAGATAGTTTCTATAAGTATTAAATAAACTAATGATTTTAAATCGTTAAAAAAATATGCGAATTCTGTGGATCGAACACAGGACCTCCAGATAACTTGACCGAAGTTTTTTCTTCAGTCTGGCGCTCTCCCAACTGAGCTAAATCCGCTTACTATTTGTTATCAGTTCCCTTCATATCTACATAGAATAGGTTAAGTATTTTATTAGTTGCCAGAAGAACTACTGATAGTTGGGAATATTTGGTGAATAATGAAGATTGGGTGAATAATTTGATAATTTTGAGATTCAATTGTTAATCAATGTTACAATATTATGTATACAGAGTATACTAGAAGTTCTCTTCGGAGATCTTGAAGTTCACAAAAGGGAATCGATATTTCTACATAATATTATCATTACTTCTTCCCCATCTTATATTTGTCATTCATTATTGATTATGATCAATGCAATAATGATTGGTAGTTGCCAAACATTTAATACGATCCTCTG  >  BK006934/358312‑358910
                                                                                                                                                                                                                                                                                                            |                                                                                                                                                                                                                                                                                                          
TCAAAAAATGGATGCAGAAAATGCAGATAGGGTATATTCGAAAGGGGTCAAGTTGATTGCAAGCGGTACTCTACCATCTGGTATATTTAATAGGGAAGAATTGTTTGAGGAAGATAGTTTCTATAAGTATTAAATAAACTAATGATTTTAAATCGTTAAAAAAATATGCGAATTCTGTGGATCGAACACAGGACCTCCAGATAACTTGACCGAAGTTTTTTCTTCAGTCTGGCGCTCTCCCAACTGAGCTAAATACGCTTACTATTTGTTATCAGTTCTCTTCATATCTACATAGAATAGC                                                                                                                                                                                                                                                                                                            >  SRR13385771.1300721/1‑301 (MQ=60)
               AGAAAATGCAGATAGGGTATATTCGAAAGGGGTCAAGTTGATTGCAAGCGGTACTCTACCATCTGGTATATTTAATAGGGAAGAATTGTTTGAGGAAGATAGTTTCTATAAGTATTAAATAAACTAATGATTTTAAATCGTTAAAAAAATATGCGAATTCTGTGGATCGAACACAGGACCTCCAGATAACTTGACCGAAGTTTTTTCTTCAGTCTGGCGCTCTCCCAACTGAGCTAAATCCGCTTACTATTTGTTATCAGTTCTCTTCATATCTACATAGAATAGCTTAAGTGTTT                                                                                                                                                                                                                                                                                                  >  SRR13385771.947758/1‑296 (MQ=60)
                GAAAATGCAGATAGGGTATATTCGAAAGGGGTCAAGTTGATTGCAAGCGGTACTCTACCATCTGGTATATTTAATAGGGAAGAATTGTTTGAGGAAGATAGTTTCTATAAGTATTAAATAAACTAATGATTTTAAATCGTTAAAAAAATATGCGAATTCTGTGGATCGAACACAGGACCTCCAGATAACTTGACCGAAGTTTTTTCTTCAGTCTGGCGCTCTCCCAACTGAGCTAAATCCGCTTACTATTTGTTATCAGTTCTCTTCATATCTACATAGAATAGCTTAAGTGTTTTATTAT                                                                                                                                                                                                                                                                                            >  SRR13385771.797812/1‑301 (MQ=60)
                          ATAAGGTATATTCGAAAGGGGTCAAGTTGATTGCAAGCGGTACTCTACCATCTGGTATATTTAATAGGGAAGAATTGTTTGAGGAAGATAGTTTCTATAAGTATTAAATAAACTAATGATTTTAAATCGTTAAAAAAATATGCGAATTCTGTGGATCGAACACAGGACCTCCAGATAACTTGACCGAAGTTTTTTCTTCAGTCTGGCGCTCTCCCAACTGAGCTAAATCCGCTTACTATTTGTTATCAGTTCTCTTCATATCTACATAGAATAGCTTAAGTGTTTTATTAGTTGCCAGA                                                                                                                                                                                                                                                                                    >  SRR13385771.729114/1‑299 (MQ=60)
                                  TATTCGAAAGGGGTCAAGTTGATTGAAAGCGGTACTCTACCATCTGGTATATTTAATAGGGAAGAATTGTTTGAGGAAGATAGTTTCTATAAGGATTAAATAAACTAATGAGTTTAAATCGTTAAAAAAATATGCGAATTCTGTGGATCGAACACAGGACCTCCGGATAACTTGACCGAAGTTTTTTCTTCAGTCTGGCGCTCTCCCAACTGAGCTAAATCCGCTTACTATTTGTTATCAGTTCTCTTCATATCTACATAGAATAGCTTAAGTGTTTTATTAGTTGCCAGAAGAACTACT                                                                                                                                                                                                                                                                           <  SRR13385771.843659/300‑1 (MQ=60)
                                      CGAAAGGGGTCAAGTTGATTGCAAGCGGTACTCTACCATCTGGTATATTTAATAGGGAAGAATTGTTTGAGGAAGATAGTTTCTATAAGTATTAAATAAACTAATGATTTTAAATCGTTAAAAAAATATGCGAATTCTGTGGATCGAACACAGGACCTCCAGATAACTTGACCGAAGTTTTTTCTTCAGTCTGGCGCTCTCCCAACTGAGCTAAAACCGCTTACTATTTGTTATCAGTTCTCTTCATATCTACATAGAATAGCTTAAGTGTTTTATTAGTTGCCAGAAGAACTACTGATA                                                                                                                                                                                                                                                                       <  SRR13385771.1019320/300‑1 (MQ=60)
                                             GGTCAAGTTGATTGCAAGCGGTACTCTACCATCTGGTATATTTAATAGGGAAGAATTGTTTGAGGAAGATAGTTTCTATAAGTATTAAATAAACTAATGATTTTAAATCGTTAAAAAAATATGCGAATTCTGTGGATCGAACACAGGACCTCCAGATAACTTGACCGAAGTTTTTTCTTCAGTCTGGCGCTCTCCCAACTGAGCTAAATCCGCTTACTATTTGTTATCAGTTCTCTTCATATCTACATAGAATAGCTTAAGTGTTTTATTAGTTGCCAGAAGAACTACTGATAGTTGGGA                                                                                                                                                                                                                                                                >  SRR13385771.1336593/1‑300 (MQ=60)
                                                                              TGGTATATTTAATAGGGAAGAATTGTTTGAGGAAGATAGTTTCTATAAGTATTAAATAAACTAATGATTTTAAATCGTTAAAAAAATATGCGAATTCTGTGGATCGAACACAGGACCTCCAGATAACTTGACCGAAGTTTTTTCTTCAGTCTGGCGCTCTCCCAACTGAGCTAAATCCGCTTACTATTTGTTATCAGTTCTCTTCATATCTACATAGAATAGCTTAAGTGTTTTATTAGTTGCCAGAAGAACTTCTGATAGTTGGGAATATTTGGTGAATAATGAAGATTGGGTGAATAAT                                                                                                                                                                                                                              >  SRR13385771.396927/1‑301 (MQ=60)
                                                                                  ATATTTAATAGGGAAGAATTGTTTGAGGAAGATAGTTTCTATAAGTATTAAATAAACTAATGATTTTAAATCGTTAAAAAAATATGCGAATTCTGTGGATCGAACACAGGACCTCCAGATAACTTGACCGAAGTTTTTTCTTCAGTCTGGCGCTCTCCCAACTGAGCTAAATCCGCTTACTATTTGTTATCAGTTCTCTTCATATCTACATAGAATAGCTTAAGTGTTTTATTAGTTGCCAGAAGAACTACTGATAGTTGGGAATATTTGGTGAATAATGAAGATTGGGTGAATAATTTG                                                                                                                                                                                                                           >  SRR13385771.1543907/1‑300 (MQ=60)
                                                                                         ATAGGGAAGAATTGTTTGAGGAAGATAGTTTCTATAAGTATTAAATAAACTAATGATTTTAAATCGTTAAAAAAATATGCGAATTCTGTGGATCGAACACAGGACCTCCAGATAACTTGACCGAAGTTTTTTCTTCAGTCTGGCGCTCTCCCAACTGAGCTAAATCCGCTTACTATTTGTTATCAGTTCTCTTCATATCTACATAGAATAGCTTAAGTGTTTTATTAGTTGCCAGAAGAACTACTGATAGTTGGGAATATTTGGTGAATAATGAAGATTGGGTGAATAATTTGATAATTTT                                                                                                                                                                                                                   <  SRR13385771.1607054/301‑1 (MQ=60)
                                                                                                         TGAGGAAGATAGTTTCTATAAGTATTAAATAAACTAATGATTTTAAATCGTTAAAAAAATATGCGAATTCTGTGGATCGAACACAGGACCTCCAGATAACTTGACCGAAGTTTTTTCTTCAGTCTGGCGCTCTCCCAACTGAGCTAAATCCGCTTACTATTTGTTATCAGTTCTCTTCATATCTACATAGAATAGCTTAAGTGTTTTATTAGTTGCCAGAAGAACTACTGATAGTTGGGAATATTTGGTGAATAATGAAGATTGGGTGAATAATTTGATAATTTTGGGATTCAATTGTTA                                                                                                                                                                                                    <  SRR13385771.1385627/300‑1 (MQ=60)
                                                                                                             GAAGATAGTTTCTATAAGTATTAAATAAACTAATGATTTTAAATCGTTAAAAAAATATGCGAATTCTGTGGATCGAACACAGGACCTCCAGATAACTTGACCGAAGTTTTTTCTTCAGTCTGGCGCTCTCCCAACTGAGCTAAATCCGCTTACTATTTGTTATCAGTTCTCTTCATATCTACATAGAATAGCTTAAGTGTTTTATTAGTTGCCAGAAGAACTACTGATAGTTGGGAATATTTGGTGAATAATGAAGATTGGGTGAATAATTTGATAATTTTGGGATTCAATTGTTAATCAA                                                                                                                                                                                               <  SRR13385771.1290807/301‑1 (MQ=60)
                                                                                                                GATAGTTTCTATAAGTATTAAATAAACTAATGCTTTTAAATCGTTAAAAAAATATGCGAATTCTGTGGATCGAACACAGGACCTCCAGATAACTTGACCGAAGTTTTTTCTTCAGTCTGGCGCTCTCCCAACTGAGCTAAATCCGCTTACTATTTGTTATCAGTTCTCTTCATATCTACATAGAATAGCTTAAGTGTTTTATTAGTTGCCAGAAGAACTACTGATAGTTGGGAATATTTGGTGAATAATGAAGATTGGGTGAATAATTTGATAATTTTGGGATTCAATTGTTAATCAATGT                                                                                                                                                                                            >  SRR13385771.170312/1‑301 (MQ=60)
                                                                                                                            AAGTATTAAATAAACTAATGATTTTAAATCGTTAAAAAAATATGCGAATTCTGTGGATCGAACACAGGACCTCCAGATAACTTGACCGAAGTTTTTTCTTCAGTCTGGCGCTCTCCCAACTGAGCTAAATCCGCTTACTATTTGTTATCAGTTCTCTTCATATCTACATAGAATAGCTTAAGTGTTTTATTAGTTGCCAGAAGAAATACTGATAGTTGGGAATATTTGGTGAATAATGAAGATTGGGTGAATAATTTGATAATTTTGGGATTCAATTGTTAATCAATGTTACAATATTATG                                                                                                                                                                                <  SRR13385771.636940/301‑1 (MQ=60)
                                                                                                                                ATTAAATAAACTAATGATTTTAAATCGTTAAAAAAATATGCGAATTCTGTGGATCGAACACAGGACCTCCAGATAACTTGACCGAAGTTTTTTCTTCAGTCTGGCGCTCTCCCAACTGAGCTAAATCCGCTTACTATTTGTTATCAGTTCTCTTCATATCTACATAGAATAGCTTAAGTGTTTTATTAGTTGCCAGAAGAACTACTGATAGTTGGGAATATTTGGTGAATAATGAAGATTGGGTGAATAATTTGATAATTTTGGGATTCAATTGTTAATCAATGTTACAATATTATGTAT                                                                                                                                                                             <  SRR13385771.1248247/300‑1 (MQ=60)
                                                                                                                                           TAATGAGTTTAAATCGTTATAAAAATATGCGAATTCTGGGGATCGAACGCAGGACCTCCAGATAACGTGACCGAAGGTTTGTCTTCAGTCTGGCTCTCTCTCAACGGAGCTAGAGCCGCTTACTATTTGTTATCAGTTCTCTTCATATCTACATAGAATTGCTTAAGTGTTTTATTAGGTTCCAGATTAACTACTTATAGTTGGTAATATTTGGTGAATAATGATGATTGGTTGAATAATTTGATAATTTTGGGATTCAATTGTTAATCAATGTTAGTATATTATGTATACAGAATATAC                                                                                                                                                                  <  SRR13385771.866459/300‑1 (MQ=60)
                                                                                                                                                     AAATCGTTAAAAAAATATGCGAATTCTGTGGATCGAACACAGGACCTCCAGATAACTTGACCGAAGTTTTTTCTTCAGTCTGGCGCTCTCCCAACTGAGCTAAATCCGCTTACTATTTGTTATCAGTTCTCTTCATATCTACATAGAATAGCTTAAGTGTTTTATTAGTTGCCAGAAGAACTACTGATAGTTGGGAATATTTGGTGAATAATGAAGATTGGGTGAATAATTTGATAATTTTGGGATTCAATTGTTAATCAATGTTACAATATTATGTATACAGAATATACTAGAAGTTCTC                                                                                                                                                       >  SRR13385771.1166123/1‑301 (MQ=60)
                                                                                                                                                     AAATCGTTAAAAAAATATGCGAATTCTGTGGATCGAACACAGGACCTCCAGATAACTTGACCGAAGTTTTTTCTTCAGTCTGGCGCTCTCCCAACTGAGCTAAATCCGCTTACTATTTGTTATCAGTTCTCTTCATATCTACATAGAATAGCTTAAGTGTTTTATTAGTTGCCAGAAGAACTACTGATAGTTGGGAATATTTGGTGAATAATGAAGATTGGGTGAATAATTTGATAATTTTGGGATTCAATTGTTAATCAATGTTACAATATTATGTATACAGAATATACTAGAAGTCCTC                                                                                                                                                       <  SRR13385771.950996/301‑1 (MQ=60)
                                                                                                                                                                    TATGCGAATTCTGTGGATCGAACACAGGACCTCCAGATAACTTGACCGAAGTTTTTTCTTCAGTCTGGCGCTCTCCCAACTGAGCTAAATCCGCTTACTATTTGTTATCAGTTCTCTTCATATCTACATAGAATAGCTTAAGTGTTTTATTAGTTGCCAGAAGAACTACTGATAGTTGGGAATATTTGGTGAATAATGAAGATTGGGTGAATAATTTGATAATTTTGGGATTCAATTGTTAATCAATGTTACAATATTATGTATACAGAATATACTAGAAGTTCTCTTCGGAGATCTTGA                                                                                                                                         >  SRR13385771.1545642/1‑300 (MQ=60)
                                                                                                                                                                                        AACACAGGACCTCCAGATAACTTGACCGAAGTTTTTTCTTCAGTCTGGCGCTCTCCCAACTGAGCTAAATCCGCTTACTATGTGTTATCAGTTCTCTTCATATCTACATAGAATAGCTTAAGTGTTTTATTAGTTGCCAGAAGAACTACTGATAGTTGGGAATATTTGGTGAATAATGAAGATTGGGTGAATAATTTGATAATTTTGGGATTCAATTGTTAATCAATGTTACAATATTATGTATACAGAATATACTAGAAGTTCTCTTCGGAGATCTTGAAGTTCACAAAAGGGAATCGAT                                                                                                                    <  SRR13385771.601524/301‑1 (MQ=60)
                                                                                                                                                                                                                         TTTTCTTCAGTCTGGCGCTCTCCCAACTGAGCTAAATCCGCTTACTATTTGTTATCAGTTCTCTTCATATCTACATAGAATAGCTTAAGTGTTTTATTAGTTGCCAGAAGAACTACTGATAGTTGGGAATATTTGGTGAATAATGAAGATTGGGTGAATAATTTGATAATTTTGGGATTCAATTGTTAATCAATGTTACAATATTATGTATACAGAATATACTAGAAGTTCTCTTCGGAGATCTTGAAGTTCACAACAGGGAATCGATATTTCTACATAATATTATCATTACTTC                                                                                         >  SRR13385771.310162/1‑295 (MQ=60)
                                                                                                                                                                                                                                CAGTCTGGCGCTCTCCCAACTGAGCTAAATCCGCTTACTATTTGTTATCAGTTCTCTTCATATCTACATAGAATAGCTTAAGTGTTTTATTAGTTGCCAGAAGAACTACTGATAGTTGGGAATATTTGGTGAATAATGAAGATTGGGTGAATAATTTGATAATTTTGGGATTCAATTGTTAATCAATGTTACAATATTATGTATACAGAATATACTAGAAGTTCTCTTCGGAGATCTTGAAGTTCACAAAAGGGAATCGATATTTCTACGTAATATTATCATTACTTCTTCCCCATCTTAT                                                                            >  SRR13385771.1488593/1‑301 (MQ=60)
                                                                                                                                                                                                                                      GGCGCTCTCCCAACTGAGCTAAATCCGCTTACTATTTGTTATCAGTTCTCTTCATATCTACATAGAATAGCTTAAGTGTTTTATTAGTTGCCAGAAGAACTACTGATAGTTGGGAATATTTGGTGAATAATGAAGATTGGGTGAATAATTTGATAATTTTGGGATTCAATTGTTAATCAATGTTACAATATTATGTATACAGAATATACTAGAAGTTCTCTTCGGAGATCTTGAAGTTCACAAAAGGGAATCGATATTTCTACATAATATTATCATTACTTCTTCCCCATCTTATATTT                                                                        <  SRR13385771.863403/299‑1 (MQ=60)
                                                                                                                                                                                                                                              CCCAACTGAGCTAAATCCGCTTACTATTTGTTATCAGTTCTCTTCATATCTACATAGAATAGCTTAAGTGTTTTATTAGTTGCCAGAAGAACTACTGATAGTTGGGAATATTTGGTGAATAATGAAGATTGGGTGAATAATTTGATAATTTTGGGATTCAATTGTTAATCAATGTTACAATATTATGTATACAGAATATACTAGAAGTTCTCTTCGGAGATCTTGAAGTTCACAAAAGGGAATCGATATTTCTACATAATATTATCATTACTTCTTCCCCATCTTATATTTGTCATTCA                                                                <  SRR13385771.732913/299‑1 (MQ=60)
                                                                                                                                                                                                                                                 AACTGAGCTAAATCCGCTTACTATTTGTTATCAGTTCTCTTCATATCTACATAGAATAGCTTAAGTGTTTTATTAGTTGCCAGAAGAACTACTGATAGTTGGGAATATTTGGTGAATAATGAAGATTGGGTGAATAATTTGATAATTTTGGGATTCAATTGTTAATCAATGTTACAATATTATGTATACAGAATATACTAGAAGTTCTCTTCGGAGATCTTGAAGTTCACAAAAGGGAATCGATATTTCTACATAATATTATCATTACTTCTTCCCCATCTTATATTTGTCATTCATTATT                                                           >  SRR13385771.1410608/1‑301 (MQ=60)
                                                                                                                                                                                                                                                     GAGCTAAATCCGCTTACTATTTGTTATCAGTTCTCTTCATATCTACATAGAATAGCTTAAGTGTTTTATTAGTTGCCAGAAGAACTACTGATAGTTGGGAATATTTGGTGAATAATGAAGATTGGGTGAATAATTTGATAATTTTGGGATTCAATTGTTAATCAATGTTACAATATTATGTATACAGAATATACTAGAAGTTCTCTTCGGAGATCTTGAAGTTCACAAAAGGGAATCGATATTTCTACATAATATTATCATTACTTCTTCCCCATCTTATATTTGTCATTCATTATTGATT                                                       <  SRR13385771.468661/301‑1 (MQ=60)
                                                                                                                                                                                                                                                          AAATCCGCTTACTATTTGTTATCAGTTCTCTTCATATCTACATAGAATAGCTTAAGTGTTTTATTAGTTGCCAGAAGAACTACTGATAGTTGGGAATATTTGGTGAATAATGAAGATTGGGTGAATAATGTGATAATTTTGGGATTCAATTGTTAATCAATGTTACAATATTATGTATACAGAATATACTAGAAGTTCTCTTCGGAGATCTTGAAGTTCACAAAAGGGAAGCGATATTTCTACATAATATTATCATTACTTCTTCCCCATCTTATATTTGTCATTCATTATTGATTATGAT                                                  <  SRR13385771.18218/301‑1 (MQ=60)
                                                                                                                                                                                                                                                                          TGTTATCAGTTCTCTTCATATCTACATAGAATAGCTTAAGTGTTTTATTAGTTGCCAGAAGAACTACTGATAGTTGGGAATATTTGGTGAATAATGAAGATTGGGTGAATAATTTGATAATTTTGGGATTCAATTGTTAATCAATGTTACAATATTATGTATACAGAATATACTAGAAGTTCTCTTCGGAGATCTTGAAGTTCACAAAAGGGAATCGATATTTCTACATAATATTATCATTACTTCTTCCCCATCTTATATTTGTCATTCATTATTGATTATGATCAATGCAATAATGATT                                  >  SRR13385771.767824/1‑301 (MQ=60)
                                                                                                                                                                                                                                                                             TATCAGTTCTCTTCATATCTACATAGAATAGCTTAAGTGTTTTATTCGTTGCCAGAAGAACTACTGATAGTTGGGAATATTTGGTGAATAATGAAGATTGGGTGAATAATTTGATAATTTTGGGATTCAATTGTTAATCAATGTTACAATATTATGTATACAGAATATACTAGAAGTTCTCTTCGGAGATCTTGAAGTTCACAAAAGGGACTCGATATTTCTACATAATCTTATCATTACTTATTCCCCATCTTATATTTGTCATTCATTATTGATTATGATCAATGCAATAATGATTGGT                               >  SRR13385771.1501100/1‑301 (MQ=60)
                                                                                                                                                                                                                                                                                       CTTCATATCTACATAGAATAGCTTAAGTGTTTTATTAGTTGCCAGAAGAACTACTGATAGTTGGGAATATTTGGTGAATAATGAAGATTGGGTGAATAATTTGATAATTTTGGGATTCAATTGTTAATCAATGTTACAATATTATGTATACAGAATATACTAGAAGTTCTCTTCGGAGATCTTGAAGTTCACAAAAGGGAATCGATATTTCTACATAATATTATCATTACTTCTTCCCCATCTTATATTTGTCATTCATTATTGATTATGATCAATGCAATAATGATTGGTAGTTGCCA                       <  SRR13385771.682590/299‑1 (MQ=60)
                                                                                                                                                                                                                                                                                         TCATATCTACATAGAATAGCTTAAGTGTTTTATTAGTTGCCAGAAGAACTACTGATAGTTGGGAATATTTGGTGAATAATGAAGATTGGGTGAATAATTTGATAATTTTGGGATTCAATTGTTAATCAATGTTACAATATTATGTATACAGAATATACTAGAAGTTCTCTTCGGAGATCTTGAAGTTCACAAAAGGGAATCGATATTTCTACATAATATTATCATTACTTCTTCCCCATCTTATATTTGTCATTCATTATTGATTATGATCAATGCAATAATGATTGGTAGTTGCCAAAC                    <  SRR13385771.1353614/300‑1 (MQ=60)
                                                                                                                                                                                                                                                                                               CTACATAGACTAGCTTAAGTGTTTTATTAGTTGCCAGAAGAACTACTGATAGTTGGGAATATTTGGTGAATAATGAAGATTGGGTGAATAATTTGATAATTTTGGGATTCAATTGTTAATCAATGTTACAATATTATGTATACAGAATATACTAGAAGTTCTCTTCGGAGATCTTGAAGTTCACAAAAGGGAATCGATATTTCTACATAATATTATCATTACTTCTTCCCCATCTTATATTTGTCATTCATTCTTGATTATGATCAATGCAATAATGATTGGTAGTTGCCAAACATTTAAT             >  SRR13385771.1214244/1‑301 (MQ=60)
                                                                                                                                                                                                                                                                                                          AGCTTAAGTGTTTTATTAGTTGCCAGAAGAACTACTGATAGTTGGGAATATTTGGTGAATAATGAAGATTGTGTGAATAATTTGATAATTTTGTGATTCAATTGTTAATCAATGTTACAATATTATGTATACAGAATATACTAGAAGTTCTCTTCGTAGATCTTGGAGTTCACAAAAGGGAATCGATATTTCTACATAATATTATCATTACTTCTTCCCCATCTTATATTTGTCATTCATTATTGATTATGATCAATGCAATAATGATTGGTAGTTGCCAAACATTTAATACGATCCTCTG  <  SRR13385771.823536/301‑1 (MQ=60)
                                                                                                                                                                                                                                                                                                            |                                                                                                                                                                                                                                                                                                          
TCAAAAAATGGATGCAGAAAATGCAGATAGGGTATATTCGAAAGGGGTCAAGTTGATTGCAAGCGGTACTCTACCATCTGGTATATTTAATAGGGAAGAATTGTTTGAGGAAGATAGTTTCTATAAGTATTAAATAAACTAATGATTTTAAATCGTTAAAAAAATATGCGAATTCTGTGGATCGAACACAGGACCTCCAGATAACTTGACCGAAGTTTTTTCTTCAGTCTGGCGCTCTCCCAACTGAGCTAAATCCGCTTACTATTTGTTATCAGTTCCCTTCATATCTACATAGAATAGGTTAAGTATTTTATTAGTTGCCAGAAGAACTACTGATAGTTGGGAATATTTGGTGAATAATGAAGATTGGGTGAATAATTTGATAATTTTGAGATTCAATTGTTAATCAATGTTACAATATTATGTATACAGAGTATACTAGAAGTTCTCTTCGGAGATCTTGAAGTTCACAAAAGGGAATCGATATTTCTACATAATATTATCATTACTTCTTCCCCATCTTATATTTGTCATTCATTATTGATTATGATCAATGCAATAATGATTGGTAGTTGCCAAACATTTAATACGATCCTCTG  >  BK006934/358312‑358910

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑