Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 6081 0.0 0 0.0% 0 0.0

Breseq alignment

N/A

GATK/CNVnator alignment

BRESEQ :: bam2aln output
CAGAGTATACTAGAAGTTCTCTTCGGAGATCTTGAAGTTCACAAAAGGGAATCGATATTTCTACATAATATTATCATTACTTCTTCCCCATCTTATATTTGTCATTCATTATTGATTATGATCAATGCAATAATGATTGGTAGTTGCCAAACATTTAATACGATCCTCTGTAATATTTCTATGAATAATTATCACAGCAACGTTCAATTATCTTCAATTCGGCTTCAGTACTGTATGAAATACTCGCTAACATTTTCTTTATTCTATAATAGCACAGTGACACTTAAACGTCAAACGTGGCGCACATTAATATACGATGTATGCATTTGGCTTGACACTGCTGTAATAAGGAACATCATCATCCGTCAACTAGTAGTCACATTAGTAGTGTATTATCACATGGTGTGTAAGAACATTACGTAAAGATTGAAAAAAAGTCATCAAAAATAAAGGAAGCTGAAACGCAAGGACTAGTAGTGTAATAGAATAATATTGTGTAAAAGTATCGATACCCTTTTTGGAATTATTGTATCTTCGAGGGTGGCTTTTAATATATTTTTGAAAACCTAATATTATAACCTTTCACAAC  >  BK006934/358741‑359329
                                                                                                                                                                                                                                                                                                        |                                                                                                                                                                                                                                                                                                    
CAGAATATACTAGAAGTTCTCTTCGGAGATCTTGAAGTTCACAAAAGGGAATCGATATTTCTACATAATATTATCATTACTTCTTCCCCATCTTATATTTGTCATTCATTATTGATTATGATTAATGCAATAATGATTGGTAGTTGCCAAACATTTAATACGATCCTCTGTAATATTTCTATGAATAATTATCACAGCAACGTTCAATTATCTTCAATTCGGCTGCAGTACTGCATGAAATACTCGCTAACATTTTCTTTATTCTATAATAGCACAGTGACACTTAAACGTCAAACTTGGC                                                                                                                                                                                                                                                                                                  <  SRR13385771.1050138/301‑1 (MQ=60)
      AGACTAGAAGTTCTCTTCGGAGAGCTTGAAGTTCACAAAAGGGAATCGATAGTTCTACATAATATTATCATTACTTCTTCCCCATCTTATATTTGTCATTCATTATTGATTATGATCAATGCAATAATGATTGGTAGTTGCCAAACATTTAATACGAGCCTCTGTAATATTTCTATGAATAATTATCACAGCAACGTTCAATTATCTTCAATTCGGCTTCAGTACTGCATGAAATACTCGCTAACATTTTCTTTATTCTATAATAGCACAGTGACACTTAAACGTCAAACTTGGCGCACA                                                                                                                                                                                                                                                                                             <  SRR13385771.63509/300‑1 (MQ=60)
           AGAAGTTCTATTCGGAGATCTTGAAGTGCACAAAAGGGAATCGATATGTCTACATAATATTATCATTACTTCTTCCCCATCGTATATTTGTCATTCATTATTGATTATGATCAATGCAATAATGATTGGTAGTTGCCAAACATTTAATACGATCCTCTGTAATATTTCTATGAATAATTATCACATCAACGTTCAATTATCTTCAATTCGGCTTCAGTACTGCATGAAATACTCGCTAACATTTTCTTTATTCTATAATAGCACAGTGACACTTAAACGTCAAACTTGGCGCACATTAATA                                                                                                                                                                                                                                                                                       <  SRR13385771.665425/301‑1 (MQ=60)
                                TGAAGTTCACAAAAGGGAATCGATATTTCTACATAATATTATCATTACTTCTTCCCCATCTTATATTTGTCATTCATTATTGATTATGATCAATGCAATAATGATTGGTAGTTGCCAAACATTTACTCCGATCCTCTGTAATATTTCTATGACTAATTATCACAGCAACGTTCAATTATCTTCAATTCGGCTTCAGTACTGCATGAAATACTCGCTAACCTTTTCTTTATTCTATAATAGCACAGTGACACTTAAACGTCAAACTTGGCGCACATTAATATACGATGTATGCATTTGGCTT                                                                                                                                                                                                                                                                  >  SRR13385771.755166/1‑301 (MQ=60)
                                 GAAGTTCACAAAAGGGAATCGATATTTCTACATAATATTATCATTACTTCTTCCCCATCTTATATTTGTCATTCATTATTGATTATGATCAATGCAATAATGATTGGTAGTTGCCAAACATTTAATACGATCCTCTGTAATATTTCTATGAATAATTATCACAGCAACGTTCAATTATCTTCAATTCGGCTTCAGTACTGCATGAAATACTCGCTAACATTTTCTTTATTCTATAATAGCACAGTGACACTTAAACGTCAAACTTGGCGCACATTAATATACGATGTATGCATTTGGCTT                                                                                                                                                                                                                                                                  <  SRR13385771.168528/300‑1 (MQ=60)
                                      TCACAAAAGGGAATCGATATTTCTACATAATATTATCATTACTTCTTCCCCATCTTATATTTGTCATTCATTATTGATTATGATCAATGCAATAATGATTGGTAGTTGCCAAACATTTAATACGATCCTCTGTAATATTTCTATGAATAATTATCACAGCAACGTTCAATTATCTTCAATTCGGCTTCAGTACTGCATGAAATACTCGCTAACATTTTCTTTATTCTATAATAGCACAGTGACACTTAAACGTCAAACTTGGCGCACATTAATATACGATGTATGCATTTGGCTTGACAC                                                                                                                                                                                                                                                             <  SRR13385771.253219/300‑1 (MQ=60)
                                                           TCTACATAATATTATCATTACTTCTTCCCCATCTTATATTTGTCATTCATTATTGATTATGATCAATGCAATAATGATTGGTAGTTGCCAAACATTTAATACGATCCTCTGTAATATTTCTATGAATAATTATCACAGCAACGTTCAATTATCTTCAATTCGGCTTCAGTACTGCATGAAATACTCGCTAACATTTTCTTTATTCTATAATAGCACAGTGACACTTAAACGTCAAACTTGGCGCACATTAATATACGATGTATGCATTTGGCTTGACACTGCTGTAATAAGGAACATCATC                                                                                                                                                                                                                                       >  SRR13385771.1778047/1‑301 (MQ=60)
                                                                  AATATTATCATTACTTCTTCCCCATCTTATATTTGTCATTCATTATTGATTATGATCAATGCAATAATGATTGGTAGTTGCCAAACATTTAATACGATCCTCTGTAATATTTCTATGAATAATTATCACAGCAACGTTCAATTATCTTCAATTCGGCTTCAGTACTGCATGAAATACTCGCTAACATTTTCTTTATTCTATAATAGCACAGTGACACTTAAACGTCAAACTTGGCGCACATTAATATACGATGTATGCATTTGGCTTGACACTGCTGTAATAAGGAACATCATCATCCATC                                                                                                                                                                                                                                <  SRR13385771.348583/301‑1 (MQ=60)
                                                                             TACTTCTTCCCCATCTTATATTTGTCATTCATTATTGATTATGATCAATGCAATAATGATTGGTAGTTGCCAAACATTTAATACGATCCTCTGTAATATTTCTATGAATAATTATCACAGCAACGTTCAATTATCTTCAATTCGGCTTCAGTACTGCATGAAATACTCGCTAACATTTTCTTTATTCTATAATAGCACAGTGACACTTAAACGTCAAACTTGGCGCACATTAATATACGATGTATGCATTTGGCTTGACACTGCTGTAATAAGGAACATCATCATCCATCAACTAGTAGTC                                                                                                                                                                                                                     >  SRR13385771.1296348/1‑301 (MQ=60)
                                                                                           CTTATATTTGTCATTCATTATTGATTATGATCAATGCAATAATGATTGGTAGTTGCCAAACATTTAATACGATCCTCTGTAATATTTCTATGAATAATTATCACAGCAACGTTCAATTATCTTCAATTCGGCTTCAGTACTGCATGAAATACTCGCTAACATTTTCTTTATTCTATAATAGCACAGTGACACTTAAACGTCACACTTGGCGCACATTAATATACGATGTATGCATTTGGCTTGACACTGCTGTAATAAGGAACATCATCATCCATCACCTAGTAGTCACATTAGTAGTGT                                                                                                                                                                                                        >  SRR13385771.1124646/1‑300 (MQ=60)
                                                                                              ATATTTGTCATTCATTATTGATTATGATCAATGCAATAATGATTGGTAGTTGCCAAACATTTAATACGATCCTCTGTAATATTTCTATGAATAATTATCACAGCAACGTTCAATTATCTTCAATTCGGCTTCAGTACTGCATGAAATACTCGCTAACATTTTCTTTATTCTATAATAGCACAGTGACACTTAAACGTCAAACTTGGCGCACATTAATATACGATGTATGCATTTGGCTTGACACTGCTGTAATAAGGAACATCATCATCCATCAACTAGTAGTCACATTAGTAGTGTATTA                                                                                                                                                                                                    <  SRR13385771.458556/301‑1 (MQ=60)
                                                                                                  TTGTCATTCATTATTGATTATGATCAATGCAATAATGATTGGTAGTTGCCAAACATTTAATACGATCCTCTGTAATATTTCTATGAATAATTATCACAGCAACGTTCAATTATCTTCAATTCGGCTTCAGTACTGCATGAAATACTCGCTAACATTTTCTTTATTCTATAATAGCACAGTGACACTTAAACGTCAAACTTGGCGCACATTAATATACGATGTATGCATTTGGCTTGACACTGCTGTAATAAGGAACATCATCATCCATCAACTAGTAGTCACATTAGTAGTGTATTATCA                                                                                                                                                                                                 <  SRR13385771.228764/300‑1 (MQ=60)
                                                                                                              ATTGATTATGATCAATGCAATAATGATTGGTAGTTGCCAAACATTTAATACGATCCTCTGTAATATTTCTATGAATAATTATCACAGCAACGTTCAATTATCTTCAATTCGGCTTCAGTACTGCATGAAATACTCGCTAACATTTTCTTTATTCTATAATAGCACAGTGACACTTAAACGTCAAACTTGGCGCACATTAATATACGATGTATGCATTTGGCTTGACACTGCTGTAATAAGGAACATCATCATCCATCAACTAGTAGTCACATTAGTAGTGTATTATCACATGGTGTGTAA                                                                                                                                                                                     >  SRR13385771.887616/1‑300 (MQ=60)
                                                                                                              ATTGATTATGATCAATGCAATAATGATTGGTAGTTGCCAAACATTTAATACGATCCTCTGTAATATTTCTATGAATAATTATCACAGCAACGTTCAATTATCTTCAATTCGGCTTCAGTACTGCATGAAATACTCGCTAACATTTTCTTTATTCTATAATAGCACAGTGACACTTAAACGTCAAACTTGGCGCACATTAATATACGATGTATGCATTTGGCTTGACACTGCTGTAATAAGGAACATCATCATCCATCAACTAGTAGTCACATTAGTAGTGTATTATCACATGGTGTGTAA                                                                                                                                                                                     >  SRR13385771.704013/1‑300 (MQ=60)
                                                                                                                  ATTATGAACAATGCAATAATGATTGGTAGTTGCCAAACATTTAATACGATCCTCTGTAATATTTCTATGAATAATTATAACAGCAACGTTCAATTATATTCAATTCGGCTTCAGTACTGCATGAAATACTCGCTAACATTTTCTTTATTCTATAATAGCACAGTGAAACTTAAACGTAAAACTTAGCGCACATTAATATACGATGTATACATTTGGCTTGACACTGCTGTAATAAGGAACATCATCATCAATCCACTAGTAGTCACATTAGTAGTGTATTAACACATGATGTGTAAGAAC                                                                                                                                                                                 >  SRR13385771.1486419/1‑300 (MQ=60)
                                                                                                                     ATGATCAATGCAATAATGATTGGTAGTTGCCAAACATTTAATACGATCCTCTGTAATATTTCTATGAATAATTATCACAGCAACGTTCAATTATCTTCAATTCGGCTTCAGTACTGCATGAAATACTCGCTAACATTTTCTTTATTCTATAATAGCACAGTGACACTTAAACGTCAAACTTGGCGCACATTAATATACGATGTATGCATTTGGCTTGACACTGCTGTAATAAGGAACATCATCATCCATCAACTAGTAGTCACATTAGTAGTGTATTATCACATGGTGTGTAAGAACATT                                                                                                                                                                              <  SRR13385771.151723/300‑1 (MQ=60)
                                                                                                                        ATCAATGCAATAATGATTGGTAGTTGCCAAACATTTAATACGATCCTCTGTAATATTTCTATGAATAATTATCACAGCAACGTTCAATTATCTTCAATTCGGCTTCAGTACTGCATGAAATACTCGCTAACATTTTCTTTATTCTATAATAGCACAGTGACACTTAAACGTCAAACTTGGCGCACATTAATATACGATGTATGCATTTGGCTTGACACTGCTGTAATAAGGAACATCATCATCCATCAACTAGTAGTCACATTAGTAGTGTATTATCACATGGTGTGTAAGAACATTACAT                                                                                                                                                                          >  SRR13385771.112250/1‑301 (MQ=60)
                                                                                                                           AATGCAATAATGATTGGTAGTTGCCAAACATTTAATACGATCCTCTGTAATATTTCTATGAATAATTATCACAGCAACGTTCAATTATCTTCAATTCGGCTTCAGTACTGCATGAAATACTCGCTAACATTTTCTTTATTCTATAATAGCACAGTGACACTTAAACGTCAAACTTGGCGCACATTAATATACGATGTATGCATTTGGCTTGACACTGCTGTAATAAGGAACATCATCATCCATCAACTAGTAGTCACATTAGTAGTGTATTATCACATGGTGTGTAAGAACATTACATAA                                                                                                                                                                        >  SRR13385771.1678597/1‑300 (MQ=60)
                                                                                                                                          tgtatTTGCCAAACATTTAATACTATCCTCTGTAAGATTTCTATTAATAATTATCACAGCAACGTTCAATTATCTTCAATTCGGCTTCAGTACTGCATGAAATACTCGCTAACATTTTCTTTATTCTATAATAGCACAGTGACACTTAAACGTCAAACTTGGCGCACATTAATATACGATGTATGCATTTGGCTTGACACTGCTGTAATAAGGAACATCATCATCCATCAACTAGTAGTCACATTAGTAGTGTATTATCACATGGTGTGTAAGAACATTACATAAAAATTGAAAAAAAGT                                                                                                                                                         <  SRR13385771.1071503/295‑1 (MQ=60)
                                                                                                                                            TAGTTTCCAAACATTTAATACGATCCTCTGTAATATTTCTATGAATAATTATCACAGCAACTTTCAATTATCTTCAATTCGGCTTCAGTACTGCATGAAATACTCGCTAACATTTTCTTTATTCTAGAATAGCACAGTGACACTTAAACGTCAAACTTGGCGCACAGTAATATACGATGTATGCATGTGGCTTGACACTGCTGTAAGAAGGAACATCATCATCCATCAACTAGTAGTCACATTAGTAGTGTATTATCACATGGTGTGTAAGAACATTACATAAAAATTGAAAAAAAGTCA                                                                                                                                                       <  SRR13385771.272819/300‑1 (MQ=60)
                                                                                                                                                                    CCTCTGTAATATTTCTATGAATAATTATCACAGCAACGTTCAATTATCTTCAATTCGGCTTCAGTACTGCATGAAATACTCGCTAACATTTTCTTTATTCTATAATAGCACAGTGACACTTAAACGTCAAACTTGGCGCACATTAATATACGATGTATGCATTTGGCTTGACACTGCTGTAATAAGGAACATCATCATCCATCAACTAGTAGTCACATTAGTAGTGTATTATCACATGGTGTGTAAGAACATTACATAAAAATTGAAAAAAAGTCATCAAAAATAAAGGAAGCTGAAATGC                                                                                                                              >  SRR13385771.1473532/1‑301 (MQ=60)
                                                                                                                                                                         GTAATATTTCTATGAATAATTATCACAGCAACGTTCAATTATCTTCAATTCGGCTTCAGTACTGCATGAAATACTCGCTAACATTTTCTTTATTCTATAATAGCACAGTGACACTTAAACGTCAAACTTGGCGCACATTAATATACGATGTATGCATTTGGCTTGACACTGCTGTAATAAGGAACATCATCATCCATCAACTAGTAGTCACATTAGTAGTGTATTATCACATGGTGTGTAAGAACATTACATAAAAATTGAAAAAAAGTCATCAAAAATAAAGGAAGCTGAAATGCAAG                                                                                                                           <  SRR13385771.1377675/299‑1 (MQ=60)
                                                                                                                                                                           AATATTTCTATGAATAATTAACACAGCAACGTTCAATTATCTTCAATTCGGCTTCAGTACTGAATGAAATACTCGCTAACATTTTCTTTCTTCTATAATAGCACAGTGACACTTAAACGTCAAACTTGGCGAACATTAATATACGATGTATGAATTTGGCTTGAAACTGCTGTAATAAGGAACATCATCATCCATCAAATAGTAGTCACATTAGTAGTGTATTATCAAATGGTGTGTAAGAACATTACATAAAAATTGAAAAAAAGTCATCAAAAATAAAGGAAGCTGAAATGCAAGGAC                                                                                                                        <  SRR13385771.743706/300‑1 (MQ=60)
                                                                                                                                                                              ATTTCTATGAATAATTATCACAGCAACGTTCAATTATCTTCAATTCGGCTTCAGTACTGCATGAAATACTCGCTAACATTTTCTTTATTCTATAATAGCACAGTGACACTTAAACGTCAAACTTGGCGCACATTATTATACGATGTATGCATTTGGCTTGAAACTGCTGTAATAAGGAACATCATCATCCATCAACTAGTAGTCACATTAGTAGTGTATTATCACATGGTGTGTAAGAACATTACATAAAAATTGAAAAAAAGTCATCAAAAATAAAGGAAGCTGAAATGCAAGGACTAGT                                                                                                                    >  SRR13385771.814518/1‑301 (MQ=60)
                                                                                                                                                                                 TCTATGAATAATTATCACAGCAACGTTCAATTATCTTCAATTCGGCTTCAGTACTGCATGAAATACTCGCTAACATTTTCTTTATGCTATAATAGCACAGTGACTCTTAAACGTCAAACTTGGCGCACATTAATATACGATGTATGCATTTGGCTTGACACTGCTGTAATAAGGAACATCATCATCCATCAACTAGTAGTCACATTAGTAGTGTATTATCACATGGTGTGTAAGAACATTACATAAAAATTGAAAAAAAGTCATCAAAAATAAAGGAAGCTGAAATGCAAGGACTAGTAG                                                                                                                  <  SRR13385771.1321617/300‑1 (MQ=60)
                                                                                                                                                                                       AATAATTATCACAGCAACGTTCAATTATCTTCAATTCGGCTTCAGTACTGCATGAAATACTCGCTAACATTTTCTTTATTCTATAATAGCACAGTGACACTTAAACGTCAAACTTGGCGCACATTAATATACGATGTATGCATTTGGCTTGACACTGCTGTAATAAGGAACATCATCATCCATCAACTAGTAGTCACATTAGTAGTGTATTATCACATGGTGTGTAAGAACATTACATAAAAATTGAAAAAAAGTCATCAAAAATAAAGGAAGCTGAAATGCAAGGACTAGTAGTGTAAT                                                                                                            >  SRR13385771.557933/1‑300 (MQ=60)
                                                                                                                                                                                           ATTATCACAGCAACGTTCAATTATCTTCAATTCGGCTTCAGTACTGCATGAAATACTCGCTAACATTTTCTTTATTCTATAATAGCACAGTGACACTTAAACGTCAAACTTGGCGCACATTAATATACGATGTATGCATTTGGCTTGACACTGCTGTAATAAGGAACATCATCATCCATCAACTAGTAGTCACATTAGTAGTGTATTATCACATGGTGTGTAAGAACATTACATAAAAATTGAAAAAAAGTCATCAAAAATAAAGGAAGCTGAAATGCAAGGACTAGTAGTGTAATATAAT                                                                                                       <  SRR13385771.1576090/301‑1 (MQ=60)
                                                                                                                                                                                              ATCACAGCAACGTTCAATTATCTTCATTTCGGCTTCAGTACTGCATGAAATACTCGCTAACATTTTCTTTATTCTATAATAGCACAGTTACACTTAAACGTCAAACTTGGCGCACATTAATATACGATGTATGCATTTGGCTTGACACTGCTGTAATAAGGAACATCATCATCCATCAACTAGTAGTCACATTAGTAGTGTATTATCACATGGTGTGTAAGAACATTACATAAAAATTGAAAAAAAGTCATCAAAAATAAAGGAAGCTGAAATGCAAGGACTAGTAGTGTAATATAATAA                                                                                                     <  SRR13385771.1686650/300‑1 (MQ=60)
                                                                                                                                                                                                            CAATTATCTTCAATTCGGCTTCAGTACTGCATGAAATACTCGCTAACATTTTCTTTATTCTATAATAGCACAGTGACACTTAAACGTCAAACTTGGCGCACATTAATATACGATGTATGCATTTGGCTTGACACTGCTGTAATAAGGAACATCATCATCCATCAACTAGTAGTCACATTAGTAGTGTATTATCACATGGTGTGTAAGAACATTACATAAAAATTGAAAAAAAGTCATCAAAAATAAAGGAAGCTGAAATGCAAGGACTAGTAGTGTAATATAATAATATTGTGTAAAAGTA                                                                                      <  SRR13385771.574978/301‑1 (MQ=60)
                                                                                                                                                                                                                   CTTCAATTCGGCTTCAGTACTGCATGAAATACTCGCTAACATTTTCTTTATTCTATAATAGCACAGTGACACTTAAACGTCAAACTTGGCGCACATTAATATACGATGTATGCATTTGGCTTGACACTGCTGTAATAAGGAACATCATCATCCATCAACTAGTAGTCACATTAGTAGTGTATTATCACATGGTGTGTAAGAACATTACATAAAAATTGAAAAAAAGTCATCAAAAATAAAGGAAGCTGAAATGCAAGGACTAGTAGTGTAATATAATAATATTGTGTAAAAGTATCGATAC                                                                               >  SRR13385771.1278036/1‑301 (MQ=60)
                                                                                                                                                                                                                       AATTCGGCTTCAGTACTGCATGAAATACTCGCTAACATTTTCTTTAATCTATAATAGCAAAGTGACACTTAAACGTCAAACTTGGCGCACATTAATATACGATGTATGCATTTGGCTTGACACTGCTGTAATAAGGAACATCATCATCCATCAACTAGTAGTCACATTAGTAGTGTAATATCACATGGTGGGTAAGAACATTACATAAAAATTGAAAAAAAGTCATCAAAAATAAAGGAAGCTGAAATGCAAGGACTAGTAGTGTAATATAATAATATTGTGTAAAAGTATCGATACCCTT                                                                           <  SRR13385771.313648/301‑1 (MQ=60)
                                                                                                                                                                                                                        ATTCGGCTTCAGTACTGCATGAAATACTCGCTAACATTTTCTTTATTCTATAATAGCACAGTGACACTTAAACGTCAAACTTGGCGCACATTAATATACGATGTATGCATTTGGCTTGACACTGCTGTAATAAGGAACATCATCATCCATCAACTAGTAGTCACATTAGTAGTGTATTATCACATGGTGTGTAAGAACATTACATAAAAATTGAAAAAAAGTCATCAAAAATAAAGGAAGCTGAAATGCAAGGACTAGTAGTGTAATATAATAATATTGTGTAAACGTATCGATACCCTTT                                                                          >  SRR13385771.1266055/1‑301 (MQ=60)
                                                                                                                                                                                                                              CTTCAGTACTGCATGAAATACTCGCTAACATTTTCTTTATTCTATAATAGCACAGTGACACTTAAACGTCAAACTTGGCGCACATTAATATACGATGTATGCATTTGGCTTGACACTGCTGTAATAAGGAACATCATCATCCATCAACTAGTAGTCACATTAGTAGTGTATTATCACATGGTGTGTAAGAACATTACATAAAAATTGAAAAAAAGTCATCAAAAATAAAGGAAGCTGAAATGCAAGGACTAGTAGTGTAATATAATAATATTGTGTAAAAGTATCGATACACTTTTTGGA                                                                     >  SRR13385771.172940/1‑300 (MQ=60)
                                                                                                                                                                                                                                TCAGTACTGCATGAAATACTCGCTAACATTTTCTTTATTCTATAATAGCACAGTGACACTTAAACGTCAAACTTGGCGCACATTAATATACGATGTATGCATTTGGCTTGACACTGCTGTAATAAGGAACATCATCATCCATCAACTAGTAGTCACATTAGTAGTGTATTATCACATGGTGTGTAAGAACATTACATAAAAATTGAAAAAAAGTCATCAAAAATAAAGGAAGCTGAAATGCAAGGACTAGTAGTGTAATATAATAATATTGTGTAAAAGTATCGATACCCTTTTTGGAAT                                                                   <  SRR13385771.185288/300‑1 (MQ=60)
                                                                                                                                                                                                                                           TGAAATACTCGCTAACATTTTCTTTATTCTATAATAGCACAGTGACACTTAAACGTCAAACTTGGCGCACATTAATATACGATGTATGCATTTGGCTTGACACTGCTGTAATAAGGAACATCATCATCCATCAACTAGTAGTCACATTAGTAGTGTATTATCACATGGTGTGTAAGAACATTACATAAAAATTGAAAAAAAGTCATCAAAAATAAAGGAAGCTGAAATGCAAGGACTAGTAGTGTACTATAATAATATTGTGTAAAAGTATCGATACCCTTTTTGGACTTATTGTATCTTC                                                       >  SRR13385771.1867424/1‑301 (MQ=60)
                                                                                                                                                                                                                                                     GCTAACATTTTCTTTATTCTATAATAGCACAGTGACACTTAAACGTCAAACTTGGCGCACATTAATATACGATGTATGCATTTGGCTTGACACTGCTGTAATAAGGAACATCATCATCCATCAACTAGTAGTCACATTAGTAGTGTATTATCACATGGTGTGTAAGAACATTACATAAAAATTGAAAAAAAGTCATCAAAAATAAAGGAAGCTGAAATGCAAGGACTAGTAGTGTAATATAATAATATTGTGTAAAAGTATCGATACCCTTTTTGGAATTATTGTATCTTCGAGGGTGGCT                                             >  SRR13385771.1096992/1‑301 (MQ=60)
                                                                                                                                                                                                                                                               TCTTTATGCTATAATAGCACAGTGACACTTAAACGTCAAACTTGGCGCACATTAATATACGAGGTATGCATTTTGCTTGACACTGCTGTAATAAGGAACATCATCATCCATCAACTAGTAGTCACATTAGTAGTGTATTATCACATGGTGTGTAAGAACATTACATAAAAATTGAAAAAAAGTCATCAAAAATAAAGGAAGCGGAAATGCAAGGACTAGTAGTGTAATATAATAATAGTGTGTAAAAGTATCGATACCCTTTTTGGAATTATTGTATCTTCGAGGGTGGCTTTTAATATA                                    <  SRR13385771.1539590/300‑1 (MQ=60)
                                                                                                                                                                                                                                                                  TTATTCTATAATAGCACAGTGACACTTAAACGTCAAACTTGGCGCACATTAATATACGATGTATGCATTTGGCTTGACACTGCTGTAATAAGGAACATCATCATCCATCAACTAGTAGTCACATTAGTAGTGTATTATCACATGGTGTGTAAGAACATTACATAAAAATTGAAAAAAAGTCATCAAAAATAAAGGAAGCTGAAATGCAAGGACTAGTAGTGTAATATAATAATATTGTGTAAAAGTATCGATACCCTTTTTGGAATTATTGTATCTTCGAGGGTGGCTTTTAATATATTT                                 <  SRR13385771.1475594/300‑1 (MQ=60)
                                                                                                                                                                                                                                                                        TATAATAGCACAGTGACACTCAAACGTCAAACTTGGCGCACATTAATATACGATGTATGCATTTGGCTTGACACTGCTGTAATAAGGAACATCATCATCCATCAACTAGTAGTCACATTAGTAGTGTATTATCACATGGTGTGTAAGAACATTACATAAAAATTGAAAAAAAGTCATCAAAAATAAAGGAAGCTGAAATGCAAGGACTAGTAGTGTAATATAATAATATTGTGTAAAAGTATCGATACCCTTTTTGGAATTATTGTATCTTCGAGGGTGGCTTTTAATATATTTTTGAAA                           >  SRR13385771.729834/1‑300 (MQ=60)
                                                                                                                                                                                                                                                                                CACAGTGACACTTAAACGTCAAACTTGGCGCACATTAATATACGATGTATGCATTTGGCTTGACACTGCTGTAATAAGGAACATCATCATCCATCAACTAGTAGTCACATTAGTAGTGTATTATCACATGGTGTGTAAGAACATTACATAAAAATTGAAAAAAAGTCATCAAAAATAAAGGAAGCTGAAATGCAAGGACTAGTAGTGTAATATAATAATATTGTGTAAAAGTATCGATACCCTTTTTGGAATTATTGTATCTTCGAGGGTGGCTTTTAATATATTTTTGAAAACCTAATAT                  >  SRR13385771.1010733/1‑301 (MQ=60)
                                                                                                                                                                                                                                                                                         ACTTAAACGTCAAACTTGGCGCACATTAATATCCGATGTATGCATTTGGCTTGACACTGCTGTAATAAGGAACATCATCATCCATCAACTAGTAGTCACATTAGTAGTGTATTATCACATGGTGTGTAAGAACATTACATAAAAATTGAAAAAAAGTCATCAAAAATAAAGGAAGCTGAAATGCAAGGACTAGTAGTGTAATATAATAATATTTTGTAAAAGTATCGATACCCTTTTTGGAATTATCGTATCTTCGAGGGTGGCTTTTAATATATTTGTGAAAACCTAATATTATAACCTT         >  SRR13385771.1432325/1‑301 (MQ=60)
                                                                                                                                                                                                                                                                                                 GTCAAACTTGGCGCACATTAATATACGATGTATGCATTTGGCTTGACACTGCTGTAATAAGGAACATCATCATCCATCAACTAGTAGTCACATTAGTAGTGTATTATCACATGGTGTGTAAGAACATTACATAAAAATTGAAAAAAAGTCATCAAAAATAAAGGAAGCTGAAATGCAAGGACTAGTAGTGTAATATAATAATATTGTGTAAAAGTATCGATACCCTTTTTGGAATTATTGTATCTTCGAGGGTGGCTTTTAATATATTTTTGAAAACCTAATATTATAACCTTTCACAAC  >  SRR13385771.307653/1‑300 (MQ=60)
                                                                                                                                                                                                                                                                                                        |                                                                                                                                                                                                                                                                                                    
CAGAGTATACTAGAAGTTCTCTTCGGAGATCTTGAAGTTCACAAAAGGGAATCGATATTTCTACATAATATTATCATTACTTCTTCCCCATCTTATATTTGTCATTCATTATTGATTATGATCAATGCAATAATGATTGGTAGTTGCCAAACATTTAATACGATCCTCTGTAATATTTCTATGAATAATTATCACAGCAACGTTCAATTATCTTCAATTCGGCTTCAGTACTGTATGAAATACTCGCTAACATTTTCTTTATTCTATAATAGCACAGTGACACTTAAACGTCAAACGTGGCGCACATTAATATACGATGTATGCATTTGGCTTGACACTGCTGTAATAAGGAACATCATCATCCGTCAACTAGTAGTCACATTAGTAGTGTATTATCACATGGTGTGTAAGAACATTACGTAAAGATTGAAAAAAAGTCATCAAAAATAAAGGAAGCTGAAACGCAAGGACTAGTAGTGTAATAGAATAATATTGTGTAAAAGTATCGATACCCTTTTTGGAATTATTGTATCTTCGAGGGTGGCTTTTAATATATTTTTGAAAACCTAATATTATAACCTTTCACAAC  >  BK006934/358741‑359329

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑