Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 6081 0.0 0 0.0% 0 0.0

Breseq alignment

N/A

GATK/CNVnator alignment

BRESEQ :: bam2aln output
GACAAGATCCGCGGATTAGAGAAGTCTGCGCTTCGCATTTAATGAAAAGATCTCCGATAAGTATATAAGTCCCTTTTTTCTCGAATTATATAAGTCACTTTCTATATGTCAGTGATTATCTCTACACTAGTCTTGCTGTATTCTTAGCAAATTTTTCTCGTATTTTAAAACCATAATACAAGGAGAATCCATGATGTCTTGTCTGGTACCAACACGTTTTACTTTGACCCTTAACACCGCGTGTCTTTTGACGAGCACCTGGGGGTTTGTTAGGGCCACATCTGTAGTCTTACCTCCAAGTTTAAGTAAAGCAGGCCATAAACAGTTTCTAACCATTATATCTATTATTGCAACAATCATTAATAACGCGGTTAACATTTCTAATTATTATATCCAAAGAAACAATAAGATGAATCTAGAAACCAAGAAAAAATCAGACTTTATTAGTAGACATGTCACTTTGCCAGTTTCTTTAGTATTAGAATCTATTGTTGCTACCGTTTATTGGCCGCTTAGATTGTTTTTTGTCAACTTAATAATGCATGGAGTTGAATCTACTGCAAAGACACCTTTTCCTAT  >  BK006934/380382‑380960
                                                                                                                                                                                                                                                                                                   |                                                                                                                                                                                                                                                                                               
GACAAGATCCGCGGATTAGAGAAGTCTGCGCTTCGCATTTAATGAAAAGATCTCCGATAAGTATATAAGTCCCTTTTTTCTCGAATTATATAAGTCACTTTCTATATGTCAGTGATTATCTCTACACTAGCCTTGCTGTATTCTTAGCAAATTTTTCTCGTATTTTAAAACCATAATACAAGGAGAATCCATGATGTCTTGTCTGGTACCAACACGTTTTACTTTGACCCTTAACACCGCGTGTCTTTTGACGAGCACCTGGGGGTTTGTTAGGGCCACATCTGTAGTCTTGCCTCCAAGT                                                                                                                                                                                                                                                                                        <  SRR13385771.889007/301‑1 (MQ=60)
   AAGATCCGCGGATTAGAGAAGTCTGCGCTTCGCATTTAATGAAAAGATCTCCGATAAGTATATAAGTCCCTTTTTTCTCGAATTATATAAGTCACTTTCTATATGTCAGTGATTATCTCTACACTAGCCTTGCTGTATTCTTAGCAAATTTTTCTCGTATTTTAAAACCATAATACAAGGAGAATCCATGATGTCTTGTCTGGTACCAACACGTTTTACTTTGACCCTTAACACCGCGTGTCTTTTGACGAGCACCTGGGGGTTTGTTAGGGCCACATCTGTAGTCTTGCCTCCAAGTTTG                                                                                                                                                                                                                                                                                     <  SRR13385771.1478855/301‑1 (MQ=60)
                 AGAGAAGTCTGCGCTTCGCATTTAATGAAAAGATCTCCGATAAGTATATAAGTCCCTTTTTTCTCGAATTATATAAGTCACTTTCTATATGTCAGTGATTATCTCTACACTAGCCTTGCTGTATTCTTAGCAAATTTTTCTCGTATTTTAAAACCATAATACAAGGAGAATCCATGATGTCTTGTCTGGTACCAACACGTTTTACTTTGACCCTTAACACCGCGTGTCTTTTGACGAGCACCTGGGGGTTTGTTAGGGCCACATCTGTAGTCTTGCCTCCAAGTTTGAGTAAAGCAGGCCA                                                                                                                                                                                                                                                                       <  SRR13385771.1711009/301‑1 (MQ=60)
                  GAGAAGTCTGCGCTTCGCATTTAATGAAAAGATCTCCGATAAGTATATAAGTCCCTTTTTTCTCGAATTATATAAGTCACTTTCTATATGTCAGTGATTATCTCTACACTAGCCTTGCTGTATTCTTAGCAAATTTTTCTCGTATTTTAAAACCATAATACAAGGAGAATCCATGATGTCTTGTCTGGTACCAACACGTTTTACTTTGACCCTTAACACCGCGTGTCTTTTGACGAGCACCTGGGGGTTTGTTAGGGCCACATCTGTAGTCTTGCCTCCAAGTTTGAGTAAAGCAGGCCAT                                                                                                                                                                                                                                                                      <  SRR13385771.1504296/301‑1 (MQ=60)
                          TGCGCTTCGCATTTAATGAAAAGATCTCCGATAAGTATATAAGTCCCTTTTTTCTCGAATTATATAAGTCACTTTCTATATGTCAGTGATTATCTCTACACTAGCCTTGCTGTATTCTTAGCAAATTTTTCTCGTATTTTAAAACCATAATACAAGGAGAATCCATGATGTCTTGTCTGGTACCAACACGTTTTACTTTGACCCTTAACACCGCGTGTCTTTTGACGAGCACCTGGGGGTTTGTTAGGGCCACATCTGTAGTCTTGCCTCCAAGTTTGAGTAAAGCAGGCCATAAACAGT                                                                                                                                                                                                                                                               <  SRR13385771.406386/300‑1 (MQ=60)
                           GCGCTTCGCATTTAATGAAAAGATCTCCGATAAGTATATAAGTCCCTTTTTTCTCGAATTATATAAGTCACTTTCTATATGTCAGTGATTATCTCTACACTAGCCTTGCTGTATTCTTAGCAAATTTTTCTCGTATTTTAAAACCATAATACAAGGAGAATCCATGATGTCTTGTCTGGTACCAACACGTTTTACTTTGACCCTTAACACCGCGTGTCTTTTGACGAGCACCTGGGGGTTTGTTAGGGCCACATCTGTAGTCTTGCCTCCAAGTTTGAGTAAAGCAGGCCATAAACAGTT                                                                                                                                                                                                                                                              <  SRR13385771.1870593/300‑1 (MQ=60)
                                TCGCATTTAATGAAATTATCTCCTATAATTATATAAGTCCCGTTTTTCTCGAATTATATAATTCACTTTCTATATTTCAGTGATTATCTCTACTCTATCCTTGCTGTATTCTTAGCAAATTTTTCTCGTTTTTTAAAGCCATAATACAAGGAGGATCCATGATGTCTTGTCTGTTACCAACACGTTTTACTTTGACCCTTAACACCGCGTGTCTTTTGACGAGCACCTGGGGGTTTGTTAGTGCCACATCTGTAGTCTTGCCTCCAAGTGTGAGTAAAGCAGGCCATAAACAGTTTCTA                                                                                                                                                                                                                                                          <  SRR13385771.1441504/299‑1 (MQ=60)
                                                 ATCTCCGATAAGTATATAAGTCCCTTTTTTCTCGAATTATATAAGTCACTTTCTATATGTCAGTGATTATCTCTACACTAGCCTTGCTGTATTCTTAGCAAATTTTTCTCGTATTTTAAAACCATAATACAAGGCGAATCCATGATGTCTTGTCTGGTACCAACACGTTTTACTTTGACCCTTAACACCGCGTGTCTTTTGACGAGCACCTGGCGGTTTGTTCGGCCCACCTCTGTAGTCTTGCCTCCAAGTTTGAGTAAAGCAGCCCATAAACAGTTTCTAACCATTATATCTATTATTT                                                                                                                                                                                                                                       >  SRR13385771.1813360/1‑301 (MQ=60)
                                                          AAGTATATAAGTCCCTTTTTTCTCGAATTATATAAGTCACTTTCTATATGTCAGTGATTATCTCTACACTAGCCTTGCTGTATTCTTAGCAAATTTTTCTCGTATTTTAAAACCATAATACAAGGAGAATCCATGATGTCTTGTCTGGTACCAACACGTTTTACTTTGACCCTTAACACCGCGTGTCTTTTGACGAGCACCTGGGGGTTTGTTAGGGCCACATCTGTAGTCTTGCCTCCAAGTTTGAGTAAAGCAGGCCATAAACAGTTTCTAACCATTATATCTATTATTGCAACAATCA                                                                                                                                                                                                                              <  SRR13385771.1356586/301‑1 (MQ=60)
                                                             TATATAAGTCCCTTTTTTCTCGAATTATATAAGTCACTTTCTATATGTCAGTGATTATCTCTACACTAGCCTTGCTGTATTCTTAGCAAATTTTTCTCGTATTTTAAAACAATAATACAAGGAGAATCCATGATGTCTTGTCTGGTACCAACACGTTTTACTTTGACCCTTAACACCGCGTGTCTTTTGACGCGCACCTGGGGGTTTGTTAGGGCCACATCTGTAGTCTTGCCTCCAAGTTTGAGTAAAGCAGGACATCAACAGTTTATAACCATTATCTCTATTATTGCAACAATCATT                                                                                                                                                                                                                            >  SRR13385771.230968/1‑300 (MQ=60)
                                                                                    ATTATATAAGTCACTTTCTATATGTCAGTGATTATCTCTACACTAGCCTTGCTGTATTCTTAGCAAATTTTTCTCGTATTTTAAAACCATAATACAAGGAGAATCCATGATGTCTTGTCTGGTACCAACACGTTTTACTTTGACCCTTAACACCGCGTGTCTTTTGACGAGCACCTGGGGGTTTGTTAGGGCCACATCTGTAGTCTTGCCTCCAAGTTTGAGTAAAGCAGGCCATAAACAGTTTCTAACCATTATATCTATTATTGCAACAATCATTAATAACGCGGTTAACATTTCTAAT                                                                                                                                                                                                    <  SRR13385771.93429/301‑1 (MQ=60)
                                                                                       ATATAAGTCACTTTCTATATGTCAGTGATTATCTCTACACTAGCCTTGCTGTATTCTTAGCAAATTTTTCTCGTATTTTAAAACCATAATACAAGGAGAATCCATGATGTCTTGTCTGGTACCAACACGTTTTACCTTGACCCTTAACACCGCGTGTCTTTTGACGAGCACCTGGGGGTTTGTTAGGGCCACATCTGTAGTCTTGCCTCCAAGTTTGAGTAAAGCAGGCCATAAACAGTTTCTAACCATTATATCCATTATTGCAACAATCATTAATAACGCGGTTAACATTTCTAATTAT                                                                                                                                                                                                 >  SRR13385771.849375/1‑301 (MQ=60)
                                                                                             GTCACTTTCTATATGTCAGTGATTATCTCTACACTAGCCTTGCTGTATTCTTAGCAAATTTTTCTCGTATTTTAAAACCATAATACAAGGAGAATCCATGATGTCTTGTCTGGTACCAACACGTTTTACTTTGACCCTTAACACCGCGTGTCTTTTGACGAGCACCTGGGGGTTTGTTAGGGCCACATCTGTAGTCTTGCCTCCAAGTTTGAGTAAAGCAGGCCATAAACAGTTTCTAACCATTATATCTATTATTGCAACAATCATTAATAACGCGGTTAACATTTCTAATTAGTATATC                                                                                                                                                                                           <  SRR13385771.608294/301‑1 (MQ=60)
                                                                                                            TCAGTGATTATCTCTACACTAGCCTTGCTGTATTCTTAGCAAATTTTTCTCGTATTTTAAAACCATAATACAAGGAGAATCCATGATGTCTTGTCTGGTACCAACACGTTTTACTTTGACCCTTAACACCGCGTGTCTTTTGACGAGCACCTGGGGGTTTGTTAGGGCCACATCTGTAGTCTTGCCTCCAAGTTTGAGTAAAGCAGGCCATAAACAGTTTCTAACCATTATATCTATTATTGCAACAATCATTAATAACGCGGTTAACATTTCTAATTATTATATCCAAAGAAACAATAA                                                                                                                                                                             >  SRR13385771.254141/1‑300 (MQ=60)
                                                                                                                                AGCCTTGCTGTATTCTTAGCAAATTTTTCTCGTATTTTAAAACCATAATACAAGGAGAATCCATGATGTCTTGTCTGGTACCAACACGTTTTACTTTGACCCTTAACGCCGCGTGTCTTTTGACGAGCACCTGGGGGTTTGTTAGGGCCACATCTGTAGTCTTGCCTCCAAGTTTGAGTAAAGCAGGCCATAAACAGTTTCTAACCATTATATCTATTATTGCAACAATCATTAATAACGCGGTTAACATTTCTAATTATTATATCCAAAGAAACAATAAGATGAATCTAGAAACCAAGA                                                                                                                                                         <  SRR13385771.336414/300‑1 (MQ=60)
                                                                                                                                AGCCTTGCTGTATTCTTAGCAAATGTTTCTCGTATTTTAAAACCATAATACAAGGAGAAGCCATGATGTCTTGGCTGGTACCAACACGTGTTACTTTGACCCTTAACACCGCGTGTCTTTTGACGAGCACCTGGGGGTTGGTTAGGGCCACATCTGGAGTCTTGCCTCCAAGTTTGAGTAAAGCAGGCCATAAACAGTTTCTAACCATTATATCTATTATTGCAACAATCATTAATAACGCGGTTAACATTTCTAATTATGATATCCAAAGAAACAATAAGATGAATCTAGAAACCAAGA                                                                                                                                                         <  SRR13385771.1037963/300‑1 (MQ=60)
                                                                                                                                 GCCTTGCTGTATTCTTAGCAAATTTTTCTCGTATTTTAAAACCATAATACAAGGAGAATCCATGATGTCTTGTCTGGTACCAACACGTTTTACTTTGACCCTTAACACCGCGTGTCTTTTGACGAGCACCTGGGGGTTTGTTAGGGCCACATCTGTAGTCTTGCCTCCAAGTTTGAGTAAAGCAGGCCATAAACAGTTTCTAACCATTATATCTATTATTGCAACAATCATTAATAACGCGGTTAACATTTCTAATTATTATATCCAAAGAAACAATAAGATGAATCTAGAAACCAAGAAA                                                                                                                                                       <  SRR13385771.1715462/301‑1 (MQ=60)
                                                                                                                                                    AAATTTTTCTCGTATTTTAAAACCATAATACAAGGAGAATCCATGATGTCTTGTCTGGTACCAACACGTTTTACTTTGACCCTTAACACCGCGTGTCTTTTGACGAGCACCTGGGGGTTTGTTAGGGCCACATCTGTAGTCTTGCCTCCAAGTTTGAGTAAAGCAGGCCATAAACAGTTTCTAACCATTATATCTATTATTGCAACAATCATTAATAACGCGGTTAACATTTCTAATTATTATATCCAAAGAAACAATAAGATGAATCTAGAAACCAAGAAAAAATCAGACTTTATTAGTA                                                                                                                                    <  SRR13385771.1835005/301‑1 (MQ=60)
                                                                                                                                                    AAATTTTTCTCGTATTTTAAAACCATAATACAAGGAGAATCCATGATGTCTTGTCTGGTACCAACACGTTTTACTTTGACCCTTAACACCGCGTGTCTTTTGACGAGCACCTGGGGGTTTGTTAGGGCCACATCTGTAGTCTTGCCTCCAAGTTTGAGTAAAGCAGGCCATAAACAGTTTCTAACCATTATATCTATTATTGCAACAATCATTAATAACGCGGTTAACATTTCTAATTATTATATCCAAAGAAACAATAAGATGAATCTAGAAACCAAGAAAAAATCAGACTTTATTAGT                                                                                                                                     >  SRR13385771.986052/1‑300 (MQ=60)
                                                                                                                                                              GGTATTTTAAAACCATAATCCATGGAGAAGCCATGATGTCTTGTCTGGTACCAACACGTTTTACTTTGACGCTTAACACCGCGTGTCTTTTGACGAGCACCTGGGGGTTTGTTAGGGCCACATCTGTAGTCTTGCCTCCAAGTTTGAGTAAAGCAGGCCATAAACAGGTTCTAACCATTATAGCTATTATTGCAACAATCATGAATAACGCGGTTAACATTTCTAATTATTATATCCAAAGAAACAATAAGATGAATCTAGAAACCAAGAAAAAATCAGACTTTATTAGTATACATGT                                                                                                                             <  SRR13385771.541924/298‑1 (MQ=60)
                                                                                                                                                                       AAACCATAATACAAGGAGAATCCATGATGTCTTGTCTGGTACCAACACGTTTTACTTTGACCCTTAACACCGCGTGTCTTTTGACGAGCACCTGGGGGTTTGTTAGGGCCACATCTGTAGTCTTGCCTCCAAGTTTTAGTAAAGCAGGCCATAAACAGTTTCTAACCATTATATCTATTATTGCAACAATAATTAATAACTCGGTTAACATTTCTAATTATTATATCCAAAGAAACAATAAGATGAATCTAGAAACCAAGAAAAAATCATACTTTATTAGTAGACATGTCACTTTGCCAGT                                                                                                                 <  SRR13385771.1873818/301‑1 (MQ=60)
                                                                                                                                                                             TAATACAAGGAGAATCCATGATGTCTTGTCTGGTACCAACACGTTTTACTTTGACCCTTAACACCGCGTGTCTTTTGACGAGCACCTGGGGGTTTGTTAGGGCCACATCTGTAGTCTTGCCTCCAAGTTTGAGTAAAGCAGGCCATAAACAGTTTCTAACCATGATATCTATTATTGCAACAATC                                                                                                                                                                                                                               <  SRR13385771.442864/185‑1 (MQ=60)
                                                                                                                                                                                TACAAGGAGAATCCATGATGTCTTGTCTGGTACCAACACGTTTTACTTTGACCCTTAACACCGCGTGTCTTTTGACGAGCACCTGGGGGTTTGTTAGGGCCACATCTGTAGTCTTGCCTCCAAGTTTGAGTAAAGCAGGCCATAAACAGTTTCTAACCATTATATCTATTATTGCAACAATCATTAATAACGCGGTTAACATTTCTAATTATTCTATCCAAAGAAACAATAAGATGAATCTAGAAACCAAGAAAAAATCAGACTTTATTAGTAGACATGTCACTTTGCCAGTTTCTTTAGT                                                                                                        >  SRR13385771.66348/1‑301 (MQ=60)
                                                                                                                                                                                   AAGGAGAATCCATGATGTCTTGTCTGGTACCAACACGTTTTACTTTGAACCTTAACACCGCGTGTCTTTTGACGAGCACCTGGGGGTTTGTTAGGGCCACATCTGTAGTCTTGCCTCCAAGTTTGAGTAAAGCAGGCCATAAACAGTTTCTAACCATTATATCTATTATTGCAACAATCATTAATAACGCGGTTAACATTTCTAATTATTATATCCAACGAAACAATAAGATGAATCTAGAAACCAAGAAAAAATCAGACTTTATTAGTAGACATGTCACTTTGCCAGTTTCTTTAGTATT                                                                                                     >  SRR13385771.1141634/1‑301 (MQ=60)
                                                                                                                                                                                   AAGGAGAATCCATGATGTCTTGTCTGGTACCAACACGTTTGACTTTGACCCTTAACACCGCGTGTCTTTTGACGAGCACCTGGGGGTTTGTTAGGGCCACATCTGTAGTCTTGCCTCCAAGTTTGAGTAAAGCAGGCCATAAACAGTTTCTAACCATTATATCTATTATTGCAACAATCATTAATAACGCGGTTAACATTTCTAATTATTATATCCAAAGAAACAATAAGATGAATCTAGAAACCAATAAACAATCAGACTTTAATAGTAGACATTTCACTTAGCCAGGTTCTTTAGTATT                                                                                                     >  SRR13385771.581419/1‑301 (MQ=60)
                                                                                                                                                                                                  TGTCTTGTCTGGTACCAACACGTTTTACTTTGACCCTTAACACCGCGTGTCTTTTGACGAGCACCTGGGGGTTTGTTAGGGCCACATCTGTAGTCTTGCCTCCAAGTTTGAGTAAAGCAGGCCATAAACAGTTTCTAACCATTATAACTATTATTGCAACAATCATTAATAACGCGGTTAACATTTCTAATTATTATATCCAAAGAAACAATAAGATGAATCTAGAAACCAAGAAAAAATCAGACTTTATTAGTAGACATGTCACTTTGCCAGTTTCTTTAGTATTAGAATCTATTGTTGC                                                                                      >  SRR13385771.715708/1‑301 (MQ=60)
                                                                                                                                                                                                     CTTGTCTGGTACCAACACGTTTTACTTTGACCCTTAACACCGCGTGTCTTTTGACGAGCACCTGGGGGTTTGTTAGGGCCACATCTGTAGTCTTGCCTCCCAGTTTGAGTAAAGCAGGCCATAAACAGTTTCTAACCATTATATCTATTATTGCAACAATCATTAATAACGCGGTTAACATTTCTAATTATTATATCCAAAGAAACAATAAGATGAATCTAGAAACCAAGAAAAAATCAGACTTTATTAGTAGACATGTCACTTTGCCAGTTTCTTTAGTATTAGAATCTATTGTTGCTAC                                                                                   >  SRR13385771.264777/1‑301 (MQ=60)
                                                                                                                                                                                                        GTCTGGTACCAACACGTTTTACTTTGACCCTTAACACCGCGTGTCTTTTGACGAGCACCTGGGGGTTTGTTAGGGCCACATCTGTAGTCTTGCCTCCAAGTTTGAGTAAAGCAGGCCATAAACAGTTTCTACCCATTATATCTATTATTGCAACAATCATTAATAACGCGGTTAACATTTCTAATTATTATATCCAAAGAAACAATAAGATGAATCTAGAAACCAAGAAAAAATCAGACTTTATTAGTAGACATGTCACTTTGCCAGTTTCTTTAGTATTAGAATCTATTGTTGCTACCGT                                                                                >  SRR13385771.1649640/1‑301 (MQ=60)
                                                                                                                                                                                                          CTGGTACCAACACGTTTTACTTTGACCCTTAACACCGCGTGTCTTTTGACGAGCACCTGGGGGTTTGTTAGGGCCACATCTGTAGTCTTGCCTCCAAGTTTGAGTAAAGCAGGCCATAAACAGTTTCTAACCATTATATCTATTATTGCAACAATCATTAATAACGCGGTTAACATTTCTAATTATTATATCCATAGAAACAATAAGATGAATCTAGAAACCAAGAAAAAATCAGACTTTATTAGTAGACATGTCACTTTGCCAGTTTCTTTAGTATTAGAATCTATTGTTGCTACCGTTT                                                                              >  SRR13385771.1564028/1‑301 (MQ=60)
                                                                                                                                                                                                                CCAACACGTTTTACTTTGACCCTTAACACCGCGTGTCTTTTGACGAGCACCTGGGGGTTTGTTAGGGCCACATCTGTAGTCTTGCCTCCAAGTTTGAGTAAAGCAGGCCATAAACAGTTTCTAACCATTATATCTATTATTGCAACAATCATTAATAACGCGGTTAACATTTCTAATTATTATATCCAAAGAAACAATAAGATGAATCTAGAAACCAAGAAAAAATCAGACTTTATTAGTAGACATGTCACTTTGCCAGTTTCTTTAGTATTAGAATCTATTGTTGCTACCGTTTATTGGC                                                                        <  SRR13385771.511392/301‑1 (MQ=60)
                                                                                                                                                                                                                 CAACACGTTTTACTTTGACCCTTAACACTGCGTGTCTTTTGACGAGCACCTGGGGGTTTGTTAGGGCCACATCTGTAGTCTTGCCTCCAAGTTTGAGTAAAGCAGGCCATAAACAGTTTCTAACCATTATATCTATTATTGCAACAATCATTAATAACGCGGTTAACATTTCTAATTATTATATCCAAAG                                                                                                                                                                                      >  SRR13385771.1801122/1‑190 (MQ=60)
                                                                                                                                                                                                                      CGTTTTACTTTGACCCTTAACACCGCGTGTCTTTTGACGAGCACCTGGGGGTTTGTTAGGGCCACATCTGTAGTCTTGCCTCCAAGTTTGAGTAAAGCAGGCCAGAAACAGTTTCTAACCATTATATCTATTATTGCAACAATCATTAATAACGCGGTTAACATTTCTAATTATTATATCCAAAGAAACAATAAGATGAATCTAGAAACCAAGAAAAAATCAGACTTTATTAGTAGACATGTCACTTTGCCAGTTTCTTTAGTATTAGAATCTATTGTTGCTACCGTTTATTGGCCGCTTA                                                                  <  SRR13385771.284496/301‑1 (MQ=60)
                                                                                                                                                                                                                       GTTTTACTTTGACCCTTAACACCGCGTGTCTTTTGACGAGCACCTGGGGGTTTGTTAGGGCCACATCTGTAGTCTTGCCTCCAAGTTTGAGTAAAGCAGGCCATAAACAGTTTCTAACCATTATATCTATTATTGCAACAATCATTAATAACGCGGTTAACATTTCTAATTATTATATCCAAAGAAACAATAAGATGAATCTAGAAACCAAGAAAAAATCAGACTTTATTAGTAGACATGTCACTTTGCCAGTTTCTTTAGTATTAGAATCTATTGTTGCTACCGTTTATTGGCCGCTTAG                                                                 <  SRR13385771.753837/301‑1 (MQ=60)
                                                                                                                                                                                                                        TGTTACTTTGACCCTTAACACCGCGTTTCTGTTGACGAGCACCTGGTGGTTTGTGAGTTCCACATCTGTAGTCTTTCCTCCAATTTTGAGTAAAGCAGGCCATAAACAGTTTCTAACCATTATATCTATTATTGCAACAATCATTAATAACGCGGTTAACATGTCTAATTATTATATCCAAAGAAACAATAAGATGAATCTAGAAACCAAGAAA                                                                                                                                                       <  SRR13385771.1495939/214‑1 (MQ=60)
                                                                                                                                                                                                                                   CCCTTAACACCGCGTGTCTTTTGACGAGCACCTGTGTGTTTGTTAGGGCCACATCTGTAGTCTTGCCTCCAAGTTTGAGTAAAGCAGGCCATAAACAGTTTCTAACCATTATATCTATTATTGCAACAATCATTAATAACGCGGTTAACATTTCTAATTATTATATCCAAAGAAACAATAAGATGAATCTAGAAACCAAGAAAAAATCAGACTTTATTAGTAGACATGTCACTGTGCCAGTTTCTGTAGTATTAGAATCTATTGTTGCTACCGTTTATTGGCCGCTTAGATTGTTTTTTGT                                                     <  SRR13385771.1168519/301‑1 (MQ=60)
                                                                                                                                                                                                                                          CACCGCGTGTCTTTTGACGAGCACCTGGGGGTTTGTTAGGGCCACATCTGTAGTCTTGCCTCCAAGTTTGAGTAAAGCAGGCCATAAACAGTTTCTAACCATTATATCTATTATTGCAACAATCATTAATAACGCGGTTAACATTTCTAATTATTATATCCAAAGAAACAATAAGATGAATCTAGAAACCAAGAAAAAATCAGACTTTATTAGTAGACATGTCACTTTGCCAGTTTCTTTAGTATTAGAATCTATTGTTGCTACCGTTTATTGGCCGCTTAGATTGTTTTTTGTCAACTT                                               >  SRR13385771.1848002/1‑300 (MQ=60)
                                                                                                                                                                                                                                                     TTTTGACGAGCACCTGGGGGTTTGTTAGGGCCACATCTGTAGTCTTGCCTCCAAGTTTGAGTAAAGCAGGCCATAAACAGTTTCTAACCATTCTATCTATTATTGCAACAATCATTAATAACGCGGTTAACATTTCTAATTATTATATCCAAAGAAACAATAAGATGAATCTAGAAACCAAGAAAAAATCAGACTTTATTAGTAGAAATGTCACTTTGCCAGTTTCTTTAGTATTAGAATCTATTGTTGCTACAGTTTATTGGCCGCTTAGATTGTTTTTTGTCAACTTAATAATGCATGG                                   >  SRR13385771.1039017/1‑301 (MQ=60)
                                                                                                                                                                                                                                                         GACGAGCACCTGGGGGTTTGTTAGGGCCACATCTGTAGTCTTGCCTCCAAGTTTGAGTAAAGCAGGCCATAAACAGTTTCTAACCATTATATCTATTATTGCAACAATCATTAATAACGCGGTTAACATTTCTAATTATTATATCCAAAGAAACAATAAGATGAATCTAGAAACCAAGAAAAAATCAGACTTTATTAGTAGACATGTCACTTTGCCAGTTTCTTTAGTATTAGAATCTATTGTTGCTACCGTTTATTGGCCGCTTAGATTGTTTTTTGTCAACTTAATAATGCATGGAGT                                <  SRR13385771.1558844/300‑1 (MQ=60)
                                                                                                                                                                                                                                                                    GGGGGTTTGTTAGGGCCACATCTGTAGTCTTGCCTCCAAGTTTGAGTAAAGCAGGCCATAAACAGTTTCTAACCATTATATCTATTATTGCAACAATCATTAATAACGCGGTTAACATTTCTAATTATTATATCCAAAGAAACAATAAGATGAATCTAGAAACCAAGAAAAAATCAGACTTTATTAGTAGACATGTCACTTTGCCAGTTTCTTTAGTATTAGAATCTATTGTTGCTACCGTTTATTGGCCGCTTAGATTGTTTTTTGTCAACTTAATAATGCATGGAGTTGAATCTACTG                     <  SRR13385771.1238551/300‑1 (MQ=60)
                                                                                                                                                                                                                                                                                      CATCTGTAGTCTTGCCTCCAAGTTTGAGTAAAGCAGGCCATAAACAGTTTCTAACCATTATATCTATTATTGCAACAATCATTAATAACGCGGTTAACATTTCTAATTATTATATCCAAAGAAACAATAAGATGAATCTAGAAACCAAGAAAAAATCAGACTTTATTAGTAGACATGTCACTTTGCCAGTTTCTTTAGTATTAGCATCTATTGTTGCTACCGTTTATTGGCCGCTTAGATTGTTTTTTGTCAACTTAATAATGCATGGAGTTGAATCTACTGCAAAGACACCTTTTCCTAT  <  SRR13385771.312170/301‑1 (MQ=60)
                                                                                                                                                                                                                                                                                                   |                                                                                                                                                                                                                                                                                               
GACAAGATCCGCGGATTAGAGAAGTCTGCGCTTCGCATTTAATGAAAAGATCTCCGATAAGTATATAAGTCCCTTTTTTCTCGAATTATATAAGTCACTTTCTATATGTCAGTGATTATCTCTACACTAGTCTTGCTGTATTCTTAGCAAATTTTTCTCGTATTTTAAAACCATAATACAAGGAGAATCCATGATGTCTTGTCTGGTACCAACACGTTTTACTTTGACCCTTAACACCGCGTGTCTTTTGACGAGCACCTGGGGGTTTGTTAGGGCCACATCTGTAGTCTTACCTCCAAGTTTAAGTAAAGCAGGCCATAAACAGTTTCTAACCATTATATCTATTATTGCAACAATCATTAATAACGCGGTTAACATTTCTAATTATTATATCCAAAGAAACAATAAGATGAATCTAGAAACCAAGAAAAAATCAGACTTTATTAGTAGACATGTCACTTTGCCAGTTTCTTTAGTATTAGAATCTATTGTTGCTACCGTTTATTGGCCGCTTAGATTGTTTTTTGTCAACTTAATAATGCATGGAGTTGAATCTACTGCAAAGACACCTTTTCCTAT  >  BK006934/380382‑380960

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑