Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 6081 0.0 0 0.0% 0 0.0

Breseq alignment

N/A

GATK/CNVnator alignment

BRESEQ :: bam2aln output
GTATTTTATCAAAAGTTTCCGCCAAAATACATCAAGAAGTCGGCAAAGAAAGGTGATAAGAATTAGCATTACTACTAGTATACTACTATTTAAGCTCTTTGTATGTAAAGTGAGCAAATCTCAAATTTTGCTACTTAATTCTTATTTTCGTGCTAGCCCTACAACGGAACCCAAAAAATCAATCACCAGGGTAAGCGGG‑AAAAAAAAAAAGTGTAGGAACCGCACTATAAAAAGTCGAAGGTTTGTATTAATTTTCCACACCTCTTTAGTTTTGTTATAATCAAATTCCTTTTGGTTTTTGTTTTAAAAAGGCCAACATCATAATTATATCGCGAATGTACTACTAGTATATGCAGTTTTCTTAAAATTGCAGGGAATGACTAAAAGCCCACGTTTTTCCCACTTTTAGTAGTACTGAAGCGTAGATAGATTGAACGTTGCTGGGCGCCTGGTGTTGATCATTTCTGAAATGAGATATTGGGAATCAGCTGTATCTACATTTTATTTATACATATTTATTTTTACTGGTTCTTAGTAACGTACTTTAGTAGCAATGCTGTGTTTTAGTGCGAAC  >  BK006934/381226‑381799
                                                                                                                                                                                                                                                                                                 |                                                                                                                                                                                                                                                                                             
GTATTTTATCAAAAGTTTCCGCCAAAATACATCAAGAAGTCGGCAAAGAAAGGTGATAAGAATTAGCATTACTACTAGTATACTACTATTTAAGCTCTTTGTATGTAAAGTGAGCAAATCTCAAATTTTGCTACTTAATTCTTATTTTCGTGCTAGCCCTACAACGGAACCCAAAAAATCAATCACCAGGGTAAGCGGGAAAAAAAAAAAAGTGTAGGAACCGCACTATAAAAAGTCGAAGGTTTGTATTAATTTTCCACACCTCTTTAGTTCTGTTATAATTAAATTCGTTTTGGATTT                                                                                                                                                                                                                                                                                     <  SRR13385771.844327/300‑1 (MQ=60)
       ATCAAAAGTTTCCGCCAAAATACATCAAGAAGGCGGCAAAGAAAGGTGATAAGAATTAGCATTACTACTAGTATACTACTATTTAAGCTCTTTGTATGTAAAGTGAGCAAATCTCAAATTTTGCTACTTAATTCTTATTTTCGTGCTAGCCCTACAACGGAACCCAAAAAATCAATCACCAGGGTAAGCGGG‑AAAAAAAAAAAGTGTAGGAACCGCACTATAAAAAGTCGAAGGTTTGTATTAATTTTCCACACCTCTTTAGTTCTGTTATAATTAAATTCGTTTTGGATTTTGATTTAA                                                                                                                                                                                                                                                                             <  SRR13385771.119608/300‑1 (MQ=60)
           AAAGTTTCCGCCAAAATACATCAAGAAGTCGGCAAAGAAAGGTGATAAGAATTAGCATTACTACTAGTATACTACTATTTAAGCTCTTTGTATGTAAAGTGAGCAAATCTCAAATTTTGCTACTTAATTCTTATTTTCGTGCTAGCCCTACAACGGAACCCAAAAAATCAATCACCAGGGTAAGCGGG‑AAAAAAAAAAAGTGTAGGAACCGCACTATAAAAAGTCGAAGGTTTGTATTAATTTTCCACACCTCTTTAGTTCTGTTATAATTAAATTCGTTTTGGATTTTGATTTAAAAAGG                                                                                                                                                                                                                                                                        <  SRR13385771.1665116/301‑1 (MQ=60)
            AAGTTTCCGCCAAAATACATCAAGAAGTCGGCAAAGAAAGGTGATAAGAATTAGCATTACTACTAGGATACTACTATTTAAGCTCTTTGTATGTAAAGTGAGCAAATCTCAAATTTTGCGACTTAATTCTTATTTTCGTGCTAGCCCTACAACGGAACCCAAAAAATCAATCACCAGGGTAAGCGGG‑AAAAAAAAAAAGTGTAGGAACCGCACTATAAAAAGTCGAAGGTTTGTATTAATTTTCCACACCTCTTTAGTTCTGTTATAATTAAATTCGTTTTGGATTTTGATTTAAAAAGGC                                                                                                                                                                                                                                                                       <  SRR13385771.1686757/301‑1 (MQ=60)
                   CGCCAAAATACATCAAGAAGTCGGCAAAGAAAGGTGATAAGAATTAGCATTACTACTAGTATACTACTATTTAAGCTCTTTGTATGTAAAGTGAGCAAATCTCAAATTTTGCTACTTAATTCTTATTTTCGTGCTAGCCCTACAACGGAACCCAAAAAATCAATCACCAGGGTAAGCGGG‑AAAAAAAAAAAGTGTAGGAACCGCACTATAAAAAGTCGAAGGTTTGTATTAATTTTCCACACCTCTTTAGTTCTGTTATAATTAAATTCGTTTTGGATTTTGATTTAAAAAGGCCAACATC                                                                                                                                                                                                                                                                <  SRR13385771.894994/301‑1 (MQ=60)
                    GCCAAAATACATCAAGAAGTCGGCAAAGCAAGGTGATAAGAATTCGCATTACTCCTAGTATACTACTATTTAAGCTCTTTGTATGTACAGTGAGCAAATCTCAAATTTTGCTACTTAATTCTTCTTTTCGTGCTAGCCCTACAACGGAACCCAAAAAATCAATCACCAGGGTAAGCGGG‑‑AAAAAAAAAAGTGTAGGAACCGCACTATAAAAAGTCGAAGGTTTGTATTAATTTTCCACACCTCTTTAGTTCTGTTATAATTAAATTCGTTTTGGATTTTGATTTAAAAAGGCCAACATCAT                                                                                                                                                                                                                                                              <  SRR13385771.524883/301‑1 (MQ=60)
                            ACATCAAGAAGTCGGCAAAGAAATGTGATAAGAATTATCATTACTACTAGTATACTTCTATTTAAGCTCTTTGTATGTAAAGTGAGCAAATCTCAAATTTTGCTACTTAATTCTTATTTTCGTGCTAGCCCTACAACTGAACCCGAAAAATCAATCACCATGGTAAGCGGG‑AAAAAAAAAAAGTGTAGGAACCGCACTATAAAAAGTCGAAGGTTTGTATTAATTTTCCACACCTCTTTAGTTCTGTTATAATTAAATTCGTGTGGGAGTGTGATTTAAAAAGGCCAACATCATAATTATA                                                                                                                                                                                                                                                       <  SRR13385771.1511385/301‑1 (MQ=60)
                               TCAAGAAGTCGGCAAAGAAAGGTGATAAGAATTAGCATTACTACTAGTATACTACTATTTAAGCTCTTTGTATGTAAAGTGAGCAAATCTCAAATTTTGCTACTTAATTCTTATTTTCGTGCTAGCCCTACAACGGAACCCAAAAAATCAATCACCAGGGTAAGCGGG‑AAAAAAAAAAAGTGTAGGAACCGCACTATAAAAATTCGAAGGTTTGTATTAATTTTCCACACCTCTTTAGTTGTGTTATAATTAAATTCTTTTTGGTGTTTGTTTTAAAAAGGCaacgacattacttatatcc                                                                                                                                                                                                                                                    >  SRR13385771.1616230/1‑282 (MQ=60)
                                         GGAAAAGAAATGTGATAAGAATTAGCATTACTACTAGTATACTACTATTTAGGCTCTGTGTATGTAAAGGGAGCAAATCTCAAATTTTGCGACGTAATTCGTATGTGCGTTGTAGCCCTACAGCGGATCCCAAAAAATCAATCACCATGTTAATCGGG‑AAAAAAAAAAAGTGTTGGAACCGCACTAGAAAAAGTCGAAGGTTTGTATTAAGTTTCCACACCGCTTGAGTTCTGTGATAATTAAATTCGTTTGGGATTGTGATTGAAAAAGGCCAACATCATAATGATATCGCGAATGTACT                                                                                                                                                                                                                                          <  SRR13385771.1121308/301‑1 (MQ=60)
                                           CAAAGAAAGGTGATAAGAATTAGCATTACTACTAGTATACTACTATTTAAGCTCTTTGTATGTAAAGTGAGCAAATCTCAAATTTTGCTACTTAATTCTTATTTTCGTGCTAGCCCTACAACGGAACCCAAAAAATCAATCACCAGGGTAAGCGGG‑AAAAAAAAAAAGTGTAGGAACCGCACTATAAAAAGACAAAGGTTTGTATTACTTTTCCCCACATCTTTAGTTCTGTTATAATTCAATTCGTTTTGGATTTTGATTTAAAACGGCCAAATTCATAATTATATCGCGAATGTACTAT                                                                                                                                                                                                                                        >  SRR13385771.593663/1‑301 (MQ=60)
                                               AAAAGGTGTTAAGAATTAGCATTACTACTAGTATACTACTATTTAAGCTCTTTGTATGTAAAGGGAGCAAATCTCAAATTTTGCTACTTAATTCGTATTTTCGTGGTAGCCCTACAACGGAACCCAAAAAATCAATCACCAGGGGAAGCGGG‑AAAAAAAAAAAGGGTAGGAGCCGCACTATAAAAAGTCGAAGGTTTGGATTAATTTTCCACACCTCTTTAGTTCTGTTATAATTAAATTCGTTTTGGATTTTGATTTAAAAAGGCCAACATCATAATTATATCGCGAATGTACTACTAGT                                                                                                                                                                                                                                    <  SRR13385771.538957/301‑1 (MQ=60)
                                                   GGTGATAAGAATTAGCATTACTACTAGTATACTACTATTTAAGCTCTTTGTATGTAAAGTGAGCAAATCTCAAATTTTGCTACTTAATTCTTATTTTCGTGCTAGCCCTACAACGGAACCCAAAAAATCAATCACCAGGGTAAGCGGG‑AAAAAAAAAAAGTGTAGAAACCGCACTATAAAAAGTCGAAGGTTTGTATTAATTTTCCACACCTCTTGAGTTCTGTTATAATTAAATTCGTTTTGGATTTTGATTTAAAAAGGCCAACATCATAATTATATCGCGAATGTACTACTAGTATAT                                                                                                                                                                                                                                <  SRR13385771.836815/301‑1 (MQ=60)
                                                    GTGATAAGAATTAGCATTACTACTAGTATACTACTATTTAAGCTCTTTGTATGTAAAGTGAGCAAATCTCAAATTTTGCTACTTAATTCTTATTTTCGTGCTAGCCCTACAACGGAACCCAAAAAATCAATCACCAGGGTAAGCGGG‑AAAAAAAAAAAGGGTAGGAACCGCACTAAAAAAAGTCGAAGGTTTGTATTAATTTGCCACACCTCTTAAGTTCTGTAATAATTAAATTCGTTTTGGATTTTGATTTAAAAAGGCCAACATCAAAATTATATCccgacgatcgggagagcacacg                                                                                                                                                                                                                               >  SRR13385771.787362/1‑279 (MQ=60)
                                                           GAATTAGCATTACTACTAGTATACTACTATTTAAGCTCTTTGTATGTAAAGTGAGCAAATCTCAAATTTTGCTACTTAATTCTTATTTTCGTGCTAGCCCTACAACGGAACCCAAAAAATCAATCACCAGGGTAAGCGGG‑AAAAAAAAAAAGCGTATGAACCGCAATATAAAAAGTCGAAGGTTTGTATTAATTTTCCACACCTCTTTAGTTCTTTTATAATTAAATTCGTTTTGGCTTTTGATTTAAAAAGGCCAACATAATACTTATATCGCGAATGTACTACTAGTATATGCAGTTTT                                                                                                                                                                                                                        >  SRR13385771.195596/1‑301 (MQ=60)
                                                             ATTTGCATTTCTACTAGTGTTCTACTATTTAATCTTTTTGTATGTAAAGTGAGCAAATCTCAAATTTTTCTACTTAATTCTTTTTTTCGTGCTATCCCTACTACTGAACCCAAAAAATCAATCACCAGGGTAAGTGGG‑AAAAAAAAAAAGTGTAGGAACCGCACTATAGAAAGTCGAAGGTTTGTATTAATTTTCCACACCTCTTTAGTTCTGTTATAATTAAATTCGTTTTTGATTTTGATTTAAAAAGGCCAACATCATAATTATATCGCGAATGTACGACTAGTATATGCAGTTTTCT                                                                                                                                                                                                                      <  SRR13385771.1723453/301‑1 (MQ=60)
                                                                   ATTACTACTAGAATACTACTATTTAAGTTCTTTGTATGTAAAGTGAGTAAATCTCAAATTTTGCTAGTTAATTCTTATTTTCGTGCTAGCCATACAAAGGAACCCAAAAAATAAATCACCAGGGTAAGCGGG‑AAAAAAAAAAAGGGTAGGAACCGCACTATAAAAAGTCGAAGGTTTGTATTAATTTTCCACACCTCTTTAGTTCTGTTATAATTAAATTCGTTTTGGATTTTGATTTAAAAAGGCCAACATCATAATTATATCGCGAATGTACTACTAGTATATGCAGTTTTCTTAAAAT                                                                                                                                                                                                                <  SRR13385771.492349/301‑1 (MQ=60)
                                                                                    ACGATTTAAGCTCTTTGGATGTAAAGTGAGCAAATCTCAAATTTTGCTACTTAATTCTTATTTTCGTGCTAGCCCTACAACGGAACCCAAAAAATCAATCACCAGGGTAAGCGGG‑AAAAAAAAAAAGTGTAGGAACCGCACTATAAAAAGTCGAAGGTTTGTATTAATTTTCCACACCTCTTTAGTTCTGTTATAATTAAATTCGTTTTGGATTTTGATTTAAAAAGGCCAACATCATAATTATATCGCGAATGTACTACTAGTATATGCAGTTTTCTTAAAATTGCAGGGAATGACTAAA                                                                                                                                                                                               <  SRR13385771.1543024/301‑1 (MQ=60)
                                                                                                                      acgCAAATGTTGCTACATAATTCTTATTTTCGTGCTAGCCCTACAACGGAAAACAAAAAATCAAAAACCAAGGTAAGCGGG‑AAAAAAAAAAAGTGTAGGAACCGCACTATAAAAAGTAGAAGGTTTGTATTAATTTTCCACACCTCTTTAGTTCTGTTATAATTAAATTCGTTTTGGATTTTGATTTAAAAAGGCCAACATCATAATTATATCGCGAATGTACTACTAGTATATGCAGTTTTCTTAAAATTGCAGGGAATGACTAAAAGCCCACGTTTTTCCCACTTTTAGTAGTACTGAA                                                                                                                                                             <  SRR13385771.118492/298‑1 (MQ=60)
                                                                                                                              TTTGCTACTTAATTCTTATTTTCGTGCTAGCCCTACAACGGAACCCCACAAATCAATCACCAGGGTAAGCGGG‑AAAAAAAAAAAGTGTAGGACCCGCACTATAAAAAGTCGAAGGTTTGTATTAATTTTCCACACCTCTTTAGTTCTGTTATAATTAAATTCGTTTTGGATTTTGATTTAACAAGGCCACCCTCAAAATTATATCGCGAATGTACTACTACTATATGCAGTTTTCTTAAAATTGCAGGGACTGACTAAAAGCCCACGTTTTTCCCACTTTTCGTAGTCCTGAAGCGTCGAT                                                                                                                                                     >  SRR13385771.1399280/1‑301 (MQ=60)
                                                                                                                                               ATTTTCGTGCTAGCCCTACAACGGAACCCAAAAAATCAATCACCAGGGTAAGCGGG‑AAAAAAAAAAAGTGTAGGAACCGCACTATAAAAAGTCGAAGGTTTGTATTAATTTTCCACACCTCTTTAGTTCTGTTATAATTAAATTCGTTTTGGATTTTGATT                                                                                                                                                                                                                                                                                >  SRR13385771.35336/1‑161 (MQ=60)
                                                                                                                                                                     GGAACCCAAAAAATCAATCACCAGGGTAAGCGGG‑AAAAAAAAAAAGTGTAGGAACCGCCCTATAAAAAGTCGAAGGTTTGTATTAATTTTCACCACCCCTTTAGTTCTTTTATAATTAAATTCGTTTTGGTTTTTGATTTAAAAAGGCAAACATCATAATTATATCGCAAATGTACTACTAGTATATCCAGTTTTCTTAAAATTGCAGGGAATAACTAAAAGCCCACGTTTTTCCACCTTTTAGTAGTACTAAAGCGTAGATGGTTTGAACGTTGCTGGcgccttgatgttcatctttttt                                                                                                              >  SRR13385771.1759611/1‑279 (MQ=60)
                                                                                                                                                                        ACCCAAAAAATCAATCACCAGGGTAAGCGGG‑AAAAAAAAAAAGTGTAGGAACCGCACTATAAAAAGTCGAAGGTTTGTATTAATTTTCCACACCTCTTTAGTTCTGTTATAATTAAATTCGTTTTGGATTTTGATCTAAAAAGGCCAACATCATAATTATATCGCGAATGTACTACTAGTATATGCAGTTTTCTTAAAATTGCAGGGAATGACTAAAAGCCCACGTTTTTCCCACTTTTAGTAGTACTGAAGCGTAGATAGATTGAACGTTGCTGGGCGCCTGATGTTGATCATTTCTGA                                                                                                            >  SRR13385771.818848/1‑300 (MQ=60)
                                                                                                                                                                                        ACCAGGGTAAGCGGG‑AAAAAAAAAAAGTGTAGGAACCGCACTATAAAAAGTCGAAGGTTTGTATTAATTTTCCACACCTCTTTAGTTCTGTTATAATTAAATTCGTTTTGGATTTTGATTTAAAAAGGCCAACATCATAATTATATCGCGAATGTACTACTAGTATATGCAGTTTTCTTAAAATTGCAGGGAATGACTAAAAGCCCACGTTTTTCCCACTTTTAGTAGTACTGAAGCGTAGATAGATTGAACGTTGCTGGGCGCCTGATGTTGATCATTTCTGAAATGAGATATTGGGAAT                                                                                           >  SRR13385771.1109188/1‑301 (MQ=60)
                                                                                                                                                                                                   CGGG‑AAAAAAAAAAAGTGTAGGAACCGCACTATAAAAAGTCGAAGTTTTGTATTAATTTTCCACACCTCTTTAGTTCTGTTATAATTAAATTCGTTTTGGATTTTGATTTAAAAAGGCCAACATCATAATTATATCGCGAATGTACTACTAGTATATGCAGTTTTCTTAAAATTGCAGGGAATGACTAAAAGCCCACGTTTTTCCCACTTTTAGTAGTACTGAAGCGTAGATAGATTGAACGTTTCTGGGCGCCTGATGTTGATCATTTCTGAAATGAGATATTGGGAATCAGCTGTATAT                                                                                <  SRR13385771.1536399/301‑1 (MQ=60)
                                                                                                                                                                                                                 AAGTGTATGAACCGCACTATAAAAAGTCGAAGGTTTGTATTAATTTTCCACACCTCTTTAGTTCTGTTATAATTAAATTCGTTTTGGATTTTGATTTAAAAAGGCCAACATCATAATTATATCGCGAATGTACTACTAGTATATGCAGTTTTCTTAAAATTGCAGGGAATGACTAAAAGCCCACGTTTTTCCCACTTTTAGTAGTACTGAAGCGTAGATAGATTGAACGTTGCTGGGCGCCTGATGTTGATCATTTCTGAAATGAGATATTGGGAATCAGCTGTATCTACATTTTATTTAT                                                                   <  SRR13385771.292962/301‑1 (MQ=60)
                                                                                                                                                                                                                            CCGCACTATAAAAAGTCGAAGGTTTGTATTAATTTTCCACACCTCTTTAGTTCTGTTATAATTAAATTCGTTTTGGATTTTGATTTAAAAAGGCCAACATCATAATTATATCGCGAATGTACTACTAGTATATGCAGTTTTCTTAAAATTGCAGGGAATGACTAAAAGCCCACGTTTTTCCCACTTTTAGTAGTACTGAAGCGTAGATAGATTGAACGTTGCTGGGCGCCTGATGTTGATCATTTCTGAAATGAGATATTGGGAATCAGCTGTATCTACATTTTATTTATACATATTTATT                                                        <  SRR13385771.1549214/301‑1 (MQ=60)
                                                                                                                                                                                                                              GCACTATAAAAAGTCGAAGGTTTGTATTAATTTTCCACACCTCTTTAGTTCTGTTATAATTAAATTCGTTTTGGATTTTGATTTAAAAAGGCCAACATCATAATTATATCGCGAATGTACTACTAGTATATGCAGTTTTCTTAAAATTGCAGGGAATGACTAAAAGCCCACGTTTTTCCCACTTTTAGTAGTACTGAAGCGTAGATAGATTGAACGTTGCTGGGCGCCTGATGTTGATCATTTCTGAAATGAGATATTGGGAATCAGCTGTATCTACATTTTATTTATACATATTTATTTT                                                      <  SRR13385771.1192724/301‑1 (MQ=60)
                                                                                                                                                                                                                                    TAAAAAGTCGAAGGTTTGTATTAATTTTCCACACCTCTTTAGTTCTGTTATAATTAAATTCGTTTTGGATTTTGATTTAAAAAGGCCAACATCATAATTATATCGCGAATGTACTACTAGTATATGCAGTTTTCTTAAAATTGCAGGGAATGACTAAAAGCCCACGTTTTTCCCACTTTTAGTAGTACTGAAGCGTAGATAGATTGAACGTTGCTGGGCGCCTGATGTTGATCATTTCTGAAATGAGATATTGGGAATCAGCTGTATCTACATTTTATTTATACATATTTATTTTTACTGG                                                >  SRR13385771.695840/1‑301 (MQ=60)
                                                                                                                                                                                                                                    AAAAAAGTCGAATGTTTTTATTAATTTGCCACACCTCTTTAGTTCTGTTATAATTAAATTCGTTTTGGATTTTTATTTAAAAAGGCCAACATCATAATTATATCGCGAATGTACTACTAGTATATGCATTTTTCTTAAAATTGCAGGGAATGACTAAAAGCCCACGTTTTTCCCACTGTTATTAGTACTGAAGCGTAGATAGATTGAACGTTGCTGGGCGCCTGATGTTGATCATTTCTGAAATGAGATATTGGGAATCAGCTGTATCTACATTTTATTTATACATATTTATTTTTACTGG                                                <  SRR13385771.544748/301‑1 (MQ=60)
                                                                                                                                                                                                                                        AAGTCGAAGGTTTGTATTAATTTTCCACACCTCTTTAGTTCTGTTATAATTAAATTCGTTTTGGATTTTGATTTAAAAAGGCCAACATCATAATTATATCGCGAATGTACTACTAGTATATGCAGTTTTCTTAAAATTGCAGGGAATGACTAAAAGCCCACGTTTTTCCCACTTTTAGTAGTACTGAAGCGTAGATAGATTGAACGTTGCTGGGCGCCTGATGTTGATCATTTCTGAAATGAGATATTGGGAATCAGCTGTATCTACATTTTATTTATACATATTTATTTTTACTGGTTCT                                            >  SRR13385771.513468/1‑301 (MQ=60)
                                                                                                                                                                                                                                             GAAGGTTTGTATTAATTTTCCACACCTCTTTAGTTCTGTTATAATTAAATTCGTTTTGGATTTTGATTTAAAAAGGCCAACATCATAATTATATCGCGAATGTACTACTAGTATATGCAGTTTTCTTAAAATTGCAGGGAATGACTAAAAGCCCACGTTTTTCCCACTTTTAGTAGTACTGAAGCGTAGATAGATTGAACGTTGCTGGGCGCCTGATGTTGATCATTTCTGAAATGAGATATTGGGAATCAGCTGTATCTACATTTTATTTATACATATTTATTTTTACTGGTTCTTAGTA                                       <  SRR13385771.251261/301‑1 (MQ=60)
                                                                                                                                                                                                                                                   TTGTATTAATTTTCCACACCTCTTTAGTTCTGTTATAATTAAATTCGTTTTGGATTTTGATTTAAAAAGGCCAACATCATAATTATATCGCGAATGTACTACTAGTATATGCAGTTTTCTTAAAATTGCAGGGAATGACTAAAAGCCCACGTTTTTCCCACTTTTAGTAGTACTGAAGCGTAGATAGATTGAACGTTGCTGGGCGCCTGATGTTGATCATTTCTGAAATGAGATATTGGGAATCAGCTGTATCTACATTTTATTTATACATATTTATTTTTACTGGTTCTTAGTAACGTAT                                 >  SRR13385771.195116/1‑301 (MQ=60)
                                                                                                                                                                                                                                                          AATTTTCCACACCTCTTTAGTTCTGTTATAATTAAATTCGTTTTGGATTTTGATTTAAAAAGGCCAACATCATAATTATATCGCGAATGTACTACTAGTATATGCAGTTTTCTTAAAATTGCAGGGAATGACTAAAAGCCCACGTTTTTCCCACTTTTAGTAGTACTGAAGCGTAGATAGATTGAACGTTGCTGGGCGCCTGATGTTGATCATTTCTGAAATGAGATATTGGGAATCAGCTGTATCTACATTTTATTTATACATATTTATTTTTACTGGTTCTTAGTAACGTACTTTTGTA                          <  SRR13385771.895717/301‑1 (MQ=60)
                                                                                                                                                                                                                                                                    ACCTCTTTAGTTCTGTTATAATTAAATTCGTTTTGGATTTTGATTTAAAAAGGCCAACATCATAATTATATCGCGAATGTACTACTAGTATATGCAGTTTTCTTAAAATTGCAGGGAATGACTAAAAGCCCACGTTTTTCCCACTTTTAGTAGTACTGAAGCGTAGATAGATTGAACGTTGCTGGGCGCCTGATGTTGATCATTTCTGAAATGAGATATTGGGAATCAGCTGTATCTACATTTTATTTATACATATTTATTTTTACTGGTTCTTAGTAACGTACTTTTGTAGCAATGCTGT                >  SRR13385771.1039286/1‑301 (MQ=60)
                                                                                                                                                                                                                                                                                  GTTATAATTAAATTCGTTTTGGATTTTGATTTAAAAAGGCCAACATCATAATTATATCGCGAATGTACTACTAGTATATGCAGTTTTCTTAAAATTGCAGGGAATGACTAAAAGCCCACGTTTTTCCCACTTTTAGTAGTACTGAAGCGTAGATAGATTGAACGTTGCTGGGCGCCTGATGTTGATCATTTCTGAAATGAGATATTGGGAATCAGCTGTATCTACATTTTATTTATACATATTTATTTTTACTGGTTCTTAGTAACGTACTTTTGTAGCAATGCTGTGTTTCAGTGCGAAC  >  SRR13385771.501842/1‑301 (MQ=60)
                                                                                                                                                                                                                                                                                  GTTATAATTAAATTCGTTTTGGATTTTGATTTAAAAAGGCCAACATCATAATTATATCGCGAATGTACTACTAGTATATGCAGTTTTCTTAAAATTGCAGGGAATGACTAAAAGCCCACGTTTTTCCCACTTTTAGTAGTACTGAAGCGTAGATAGATTGAACGTTGCTGGGCGCCTGATGTTGATCATTTCTGAAATGAGATATTGGGAATCAGCTGTATCTACATTTTATTTATACATATTTATTTTTACTGGTTCTTAGTAACGTACTTTTGTAGCAATGCTGTGTTTCAGTGCGAAC  >  SRR13385771.1147760/1‑301 (MQ=60)
                                                                                                                                                                                                                                                                                                 |                                                                                                                                                                                                                                                                                             
GTATTTTATCAAAAGTTTCCGCCAAAATACATCAAGAAGTCGGCAAAGAAAGGTGATAAGAATTAGCATTACTACTAGTATACTACTATTTAAGCTCTTTGTATGTAAAGTGAGCAAATCTCAAATTTTGCTACTTAATTCTTATTTTCGTGCTAGCCCTACAACGGAACCCAAAAAATCAATCACCAGGGTAAGCGGG‑AAAAAAAAAAAGTGTAGGAACCGCACTATAAAAAGTCGAAGGTTTGTATTAATTTTCCACACCTCTTTAGTTTTGTTATAATCAAATTCCTTTTGGTTTTTGTTTTAAAAAGGCCAACATCATAATTATATCGCGAATGTACTACTAGTATATGCAGTTTTCTTAAAATTGCAGGGAATGACTAAAAGCCCACGTTTTTCCCACTTTTAGTAGTACTGAAGCGTAGATAGATTGAACGTTGCTGGGCGCCTGGTGTTGATCATTTCTGAAATGAGATATTGGGAATCAGCTGTATCTACATTTTATTTATACATATTTATTTTTACTGGTTCTTAGTAACGTACTTTAGTAGCAATGCTGTGTTTTAGTGCGAAC  >  BK006934/381226‑381799

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑