Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F1 I1 R1 6081 0.0 0 0.0% 0 0.0

Breseq alignment

N/A

GATK/CNVnator alignment

BRESEQ :: bam2aln output
GTGTAAGTGTTAGCAAGGACGGTGACGTGGTGTATGATAATGGATTTATGTGAAATGCTTCTTTTTTCTATTACCATATATAGAAAATAGGTGTATACTATTAGTTTAATGTAATAAGCAGGACTATGACAAACCAAAGAGTGAAAGTAGCCGTTTCCACGTTTTAACGGCTTGTGTACACTTTGACAGTCAATCAGCGTAGTGACTTCTTTTATCAGCGGAAACAACCATATCCATAAAAGAAACGTGATGGTCGTTCCCGTAGTTTATTAAGTAAGATGACAAATTATCCTTCTTTAGTCAATTGAAAACAAAACTTCTTAATCTGTTTCCAATGTTTTAAAGTCGCTCATATGTTCATGACTACTTTTCCATGAGAGGGTTCTACGAAAAGCATCATCTTATTTTCGCAACGCTGCGGGTTTAGGCCTTTCCGCTGGTCTCTTTTCTGTTTACAGTTCTGCCCGAATGTAAACAAATACTTTGCGAAAAGTAAATAATGTATTCTGAAAAAAAAAAAGAGAACTGTGAACAATGCTTGATAGTTGTAGGAATATCTTAGAAGAAAGGGGATAGATTATCTGGAAAATCGTTTGAAT  >  BK006934/384436‑385034
                                                                                                                                                                                                                                                                                                            |                                                                                                                                                                                                                                                                                                          
GTGTAAGGGTTAGCAAGGACGGTGACGTGGTGTATGATAATGGATTTATGTGAAATGCTTCTTTTTTTTATTACCATATATAGAAAATAGGTGTATACTATTAGTTTAATGTAATAAGCAGGACTATGACAAACCAAAGAGTGAAACTAGCCGTTTCCACGTTTTAACGGCTTGTGTACACTTTGACAGTCAATCAGCGTAGTGACTTCTTTTATCAGCGGAAACAACCATATCCATAAAAGAAACGTGATGGTCGTTCCCGTAGTTTATTAAGTAAGATGACAAATTATCCTTCTTTAGC                                                                                                                                                                                                                                                                                                            <  SRR13385771.1513534/301‑1 (MQ=60)
   TAAGTGTTAGCAAGGACGGTGACGTGGTGTATGATAATGGATTTATGTGAAATGCTTCTTTTTTTTATTACCATATATAGAAAATAGGTGTATACTATTAGTTTAATGTAATAAGCAGGACTATGACAAACCAAAGAGTGAAACTAGCCGTTTCCACGTTTTAACGGCTTGTGTACACTTTGACAGTCAATCAGCGTAGTGACTTCTTTTATCAGCGGAAACAACCATATCCATAAAAGAAACGTGATGGTCGTTCCCGTAGTTTATTAAGTAAGATGACAAAATATCCTTCTTTAGCCA                                                                                                                                                                                                                                                                                                          >  SRR13385771.368735/1‑300 (MQ=60)
        GTTAGCAAGGACGGTTACGTTGTGTATGATAATGGATTTAAGTGAAATGCTTCTTTTTTTTATTACCATATATAGAAAATAGGTGTATACTATTAGTTTAATGTAATAAGCAGGACTATGACAAACCAAAGAGTGAAACTAGCCGTTTCCACGTTTTAACGGCTTGTGTACACTTTGACAGTCAATCAGCGTAGTGACTTCTTTTATCAGCGGAAACAACCATATCCATAAAAGAAACGTGATGGTCGTTCCCGTAGTTTATTAAGTAAGATGACAAATTATCCTTCTTTAGCCAATTGA                                                                                                                                                                                                                                                                                                     <  SRR13385771.442819/300‑1 (MQ=60)
          TAGCAAGGACGGTGACGTGGTGTATGATAATGGATTTATGTGAAATGCTTCTTTTTTTTATTACCATATATAGAAAATAGGTGTATACTATTAGTTTAATGTAATAAGCAGGACTATGACAAACCAAAGAGTGAAACTAGCCGTTTCCACGTTTTAACGGCTTGTGTACACTTTGACAGTCAATCAGCGTAGTGACTTCTTTTATCAGCGGAAACAACCATATCCATAAAAGAAACGTGATGGTCGTTCCCGTAGTTTATTAAGTAAGATGACAAATTATCCTTCTTTAGCCAATTGAAA                                                                                                                                                                                                                                                                                                   >  SRR13385771.237476/1‑300 (MQ=60)
                 GACGTTGACGTGTTTTATGATAATTGATTTTTGTGAGATGCTTCTTTTTTTTATTACCATATAGAGAAAATAGGTGTATACTATTAGTTTAATGTAATAAGCATGACTATGACAAACCAAAGAGTGAAACTAGCCGTTTCCACGTTTTAACGGCTTGTGTACACTTTGACAGTCAATCAGCGTAGTGACTTCTTTTATCAGCGGAAACAACCATATCCATAAAAGAAACGTGATGGTCGTTCCCGTAGTTTATTAAGTAAGATGACAAATTATCCTTCTTTAGCCAATTGAAAACAAAACT                                                                                                                                                                                                                                                                                           <  SRR13385771.55220/301‑1 (MQ=60)
                          GTGGTGTATGATAATGGATTTATGTGAAATGCTTCTTTTTTTTATTACCATATATAGAAAATAGGTGTATACTATTAGTTTAATGTAATAAGCAGGACTATGACAAACCAAAGAGTGAAACTAGCCGTTTCCACGTTTTAACGGCTTGTGTACACTTTGACAGTCAATCAGCGTAGTGACTTCTTTTATCAGCGGAAACAACCATATCCATAAAAGAAACGTGATGGTCGTTCCCGTAGTTTATTAAGTAAGATGACAAATTATCCTTCTTTAGCCAATTGAAAACAAAACTTCTTAATCT                                                                                                                                                                                                                                                                                  <  SRR13385771.1266985/301‑1 (MQ=60)
                                    ATAATGGATTTATGTGAAATGCTTCTTTTTTTTATTACCATATATAGAAAATAGGTGTATACTATTAGTTTAATGTAATAAGCAGGACTATGACAAACCAAAGAGTGAAACTAGCCGTTTCCACGTTTTAACGGCTTGTGTCCACTTTGACAGTCAATCAGCGTAGTGACTTATTTTATCAGCGGAAACAACCATATCCATAAAAGAAACGTGATGGTCGTTCCCGAAGTTTAATAAGTAAGATGAAAAATTATCCTTCTTTAGCAAATTGAAAACAAAAATTCTTAATCTGTTTCCAATT                                                                                                                                                                                                                                                                        >  SRR13385771.1681749/1‑301 (MQ=60)
                                         GGATTTATGTGAAATGCTTCTTTTTTTTATTACCATATATAGAAAATAGGTGTATACTATTAGTTTAATGTAATAAGCAGGACTATGACAAACCAAAGAGTGAAACTAGCCGTTTCCACGTTTTAACGGCTTGTGCACACTTTGACAGTCAATCAGCGTAGTGACTTCTTTTATCAGCGGAAACAACCATATCCATAAAAGAAACGTGATGGTCGTTCCCGTAGTTTATTAAGTAAGATGACAAATTATCCTTCTTTAGCCAATTGAAAACAAAACTTCTTAATCTGTTTCCAATGTTTT                                                                                                                                                                                                                                                                    >  SRR13385771.806731/1‑300 (MQ=60)
                                             TTTTGTGAAATGCTTCTTTTTTTTATTACCATATATAGAAAATAGGTGTATACTATTAGTTTAATGTAATAAGCAGGACTATGACAAACCAAAGAGTGAAACTAGCCGTTTCCACGTTTTAACGGCTTGTGTACACTTTGACAGTCAATCAGCGTAGTGACTTCTTTTATCAGCGGAAACAACCATATCCATAAAAGAAACGTGATGGTCGTTCCCGTAGTTTATTAAGTAAGATGACAAATTATCCTTCTTTAGCCAATTGAAAACAAAACTTCTTAATCTGTTTCCAATGTTTTAAAG                                                                                                                                                                                                                                                                <  SRR13385771.103380/300‑1 (MQ=60)
                                                  TGAAATGCTTCTTTTTTTTATTACCATATATAGAAAATAGGTGTATACTATTAGTTTAATGTAATAAGCAGGACTATGACAAACCAAAGAGTGAAACTAGCCGTTTCCACGTTTTAACGGCTTGTGTACACTTTGACAGTCAATCAGCGTAGTGACTTCTTTTATCAGCGGAAACAACCATATCCATAAAAGAAACGTGATGGTCGTTCCCGCAGTTTATTAAGTAAGATGACAAATTATCCTTCTTTAGCCAATTGAAAACAAAACTTCTTAATCTGTTTCCACTGTTTTAAAGTCGCTC                                                                                                                                                                                                                                                          >  SRR13385771.1740693/1‑301 (MQ=60)
                                                     AATGCTTCTTTTTTTTATTACCATATATAGAAAATAGGTGTATACTATTAGTTTAATGTAATAAGCAGGACTATGACAAACCAAAGAGTGAAACTAGCCGTTTCCACGTTTTAACGGCTTGTGTACACTTTGACAGTCAATCAGCGTAGTGACTTCTTTTATCAGCGGAAACAACCATATCCATAAAAGAAACGTGATGGTCGTTCCCGTAGTTTATTAAGTAAGATGACAAATTATCCTTCTTTAGCCAATTGAAAACAAAACTTCTTAATCTGTTTCCAATGTTTTAAAGTCGCTCAT                                                                                                                                                                                                                                                        >  SRR13385771.1602149/1‑300 (MQ=60)
                                                      ATGATTCTTTTTTTTATTACCATATATAGAAAATAGGTGTATACTATTAGTTTAATGTAATAAGCAGGACTATGACAAACCAAAGAGTGAAACTAGCCGTTTCCACGTTTTAACGGCTTGTGTACACTTTGACAGTCAATCAGCGTAGTGACTTCTTTTATCAGCGGAAACAACCATATCCATAAAAGAAACGTGATGGTCGTTCCCGTAGTTTATTAAGTAAGATGACAAATTATCCTTCTTTAGCCAATTGAAAACAAAACTTCTTAATCTGTTTCCAATGTTTTAAAGTCGCTCATAT                                                                                                                                                                                                                                                      <  SRR13385771.706042/301‑1 (MQ=60)
                                                            CTTTTTTTTATTACCATATATAGAAAATAGGTGTATACTATTAGTTTAATGTAATAAGCAGGACTATGACAAACCAAAGAGTGAAACTAGCCGTTTCCACGTTTTAACGGCTTGTGTAAACTTTGACAGTCAATCAGCGTAGTGACTTCTTTTATCAGCGGAAACAACCATATCCATAAAAGAAACGTGATGGTCGTTCCCGTAGTTTATTAAGTAAGATGACAAATTATCCTTCTTTAGCCAATTGAAAACAAAAATTCTTAATCTGTTTCCAATGTTTTAAAGTCGCTCATATGTTCAT                                                                                                                                                                                                                                                >  SRR13385771.1258495/1‑301 (MQ=60)
                                                            CTTTTTTTTATTACCATATATAGAAAATAGGTGTATACTATTAGTTTAATGTAATAAGCAGGACTATGACAAACCAAAGAGTGAAACTAGCCGTTTCAACGTTTTAACGGCTTGTGTACACTTTGACAGTCAATCAGCGTAGTGACTTCTTTTATCAGCGGAAACAACCATATCCATAAAAGAAACGTGATGGTCGTTCCCGTAGTTTATTAAGTAAGATGACAAATTATACTTCTTTAGCCAATTGAAAACAAAACTTCTTAATCAGTTTCCAATGTTTTAAAGTCGCTCATATGTTCAT                                                                                                                                                                                                                                                >  SRR13385771.640205/1‑301 (MQ=60)
                                                              TTTTTTTATTACCATATATAGAAAATAGGTGTATACTATTAGTTTAATGTAATAAGCAGGACTATGACAAACCAAAGAGTGAAACTAGCCGTTTCCACGTTTTAACGGCTTGTGTACACTTTGACAGTCAATCAGCGTAGTGACTTCTTTTATCAGCGGAAACAACCATATCCATAAAAGAAACGTGATGGTCGTTCCCGTAGTTTATTAAGTAAGATGACAAATTATCCTTCTTTAGCCAATTGAAAACAAAACTTCTTAATCTGTTTCCAATGTTTTAAAGTCGCTCATATGTTCA                                                                                                                                                                                                                                                 <  SRR13385771.1860357/298‑1 (MQ=60)
                                                                             ATATAGAAAATAGGTGTATACTATTAGTTTAATGTAATAAGCAGGACTATGACAAACCAAAGAGTGAAACTAGCCGTTTCCACGTTTTAACGGCTTGTGTACACTTTGACAGTCAATCAGCGTAGTGACTTCTTTTATCAGCGGAAACAACCATATCCATAAAAGAAACGTGATGGTCGTTCCCGTAGTTTATTAAGTAAGATGACAAATTATCCTTCTTTAGCCAATTGAAAACAAAACTTCTTAATCTGTTTCCAATGTTTTAAAGTCGCTCATATGTTCATGACTACTTTTCCATGAG                                                                                                                                                                                                                               <  SRR13385771.1049421/301‑1 (MQ=60)
                                                                                 AGAAAATAGGTGTATACTATTAGTTTAATGTAATAAGCAGGACTATGACAAACCAAAGAGTGAAACTAGCCGTTTCCACGTTTTAACGGCTTGTGTACACTTTGACAGTCAATCAGCGTAGTGACTTCTTTTATCAGCGGAAACAACCATATCCATAAAAGAAACGTGATGGTCGTTCCCGTAGTTTATTAAGTAAGATGACAAATTATCCTTCTTTAGCCAATTGAAAACAAAACTTCTTAATCTGTTTCCAATGTTTTAAAGTCGCTCATATGTTCATGACTACTTTTCCATGAGAGGG                                                                                                                                                                                                                           >  SRR13385771.444790/1‑301 (MQ=60)
                                                                                 AGAAAATAGGTGTATACTATTAGTTTAATGTAATAAGCAGGACTATGACAAACCAAAGAGTGAAACTAGCCGTTTCCACGTTTTAACGGCTTGTGTACACTTTGACAGTCAATCAGCGTAGTGACTTCTTTTATCAGCGGAAACAACCATATCCATAAAAGAAACGTGATGGTCGTTCCCGTAGTTTATTAAGTAAGATGACAAATTATCCTTCTTTAGCCAATTGAAAACAAAACTTCTTAATCTGTTTCCAATGTTTTAAAGTCGCTCATATGTTCATGACTACTTTTCCATGAGAGG                                                                                                                                                                                                                            <  SRR13385771.782346/300‑1 (MQ=60)
                                                                                   AAAATAGGTGTATACTATTAGTTTAATGTAATAAGCAGGACTATGACAAACCAAAGAGTGAAACTAGCCGTTTCCACGTTTTAACGGCTTGTGTACACTTTGACAGTCAATCAGCGTAGTGACTTCTTTTATCAGCGGAAACAACCATATCCATAAAAGAAACGTGATGGTCGTTCCCGTAGTTTATTAAGTAAGATGACAAATTATCCTTCTTTAGCCAATTGAAAACAAAACTTCTTAATCTGTTTCCAATGTTTTAAAGTCGCTCATATGTTCATGACTACTTTTCCATGAGAGGGTT                                                                                                                                                                                                                         >  SRR13385771.1336388/1‑301 (MQ=60)
                                                                                      ATAGGTGTATACTATTAGTTTAATGTAATAAGCAGGACTATGACAAACCAAAGAGTGAAACTAGCCGTTTCCACGTTTTAACGGCTTGTGTACACTTTGACAGTCAATCAGCGTAGTGACTTCTTTTATCAGCGGAAACAACCATATCCATAAAAGAAACGTGATGGTCGTTCCCGTAGTTTATTAAGTAAGATGACAAATTATCCTTCTTTAGCCAATTGAAAACAAAACTTCTTAATCTGTTTCCAATGTTTTAAAGTCGCTCATATGTTCATGACTACTTTTCCATGAGAG                                                                                                                                                                                                                             <  SRR13385771.505946/294‑1 (MQ=60)
                                                                                            GTATACTATTAGTTTAATGTAATAAGCAGGACTATGACAAACCAAAGAGTGAAACTAGCCGTTTCCACGTTTTAACGGCTTGTGTACACTTTGACAGTCAATCAGCGTAGTGACTTCTTTTATCAGCGGAAACAACCATATCCATAAAAGAAACGTGATGGTCGTTCCCGTAGTTTATTAAGTAAGATGACAAATTATCCTTCTTTAGCCAATTGAAAACAAAACTTCTTAATCTGTTTCCAATGTTTTAAAGTCGCTCATATGTTCATGACTACTTTTCCATGAGAGGGTTCTATGAAA                                                                                                                                                                                                                 <  SRR13385771.712481/300‑1 (MQ=60)
                                                                                                          TAATGTAATAAGCAGGACTATGACAAACCAAAGAGTGAAACTAGCCGTTTCCCCGTTTTAACGGCTTGTGTACACTTTGACAGTCAATCAGCGTAGTGACTTCTTTTATCAGCGGAAACAACCATATCCATAAAAGAAACGTGATGGTCGTTCCCGTAGTTTATTAAGTAAGATGACAAATTATCCTTCTTTAGCCAATTGCAAACAAAACTTCTTAATCTGTTTCCAATGTTTTAAAGTAGCTAATCTGTTCATGACTACTTTTCACTGCGAGGGTTCTATGAAAAGCATCATCTTATTT                                                                                                                                                                                                  >  SRR13385771.1540561/1‑301 (MQ=60)
                                                                                                                               GACAAACCAAAGAGTGAAACTAGCCGTTTCCACGTTTTAACGGCTTGTGTACACTTTGACAGTCAATCAGCGTAGTGACTTCTTTTATCAGCGGAAACAACCATATCCATAAAAGAAACGTGATGGTCGTTCCCGTAGTTTATTAAGTAAGATGACAAATTATCCTTCTTTAGCCAATTGAAAACAAAACTTCTTAATCTGTTTCCAATGTTTTAAAGTCGCTCATATGTTCATGACTACTTTTCCATGAGAGGGTTCTATGAAAAGCATCATCTTATTTTCGCAACGCTGCGGGTTTAG                                                                                                                                                                              <  SRR13385771.286277/300‑1 (MQ=60)
                                                                                                                                         AGAGTGAAACTAGCCGTTTCCACGTTTTAACGGCTTGTGTACACTTTGACAGTCAATCAGCGTAGTGACTTCTTTTATCAGCGGAAACAACCATATCCATAAAAGAAACGTGATGGTCGTTCCCGTAGTTTATTAAGTAAGATGACAAATTATCCTTCTTTAGCCAATTGAAAACAAAACTTCTTAATCTGTTTCCAATGTTTTAAAGTCGCTCATATGTTCATGACTACTTTTCCATGAGAGGGTTCTATGAAAAGCATCATCTTATTTTCGCAACGCTGCGGGTTTAGGCTTTTCCGCT                                                                                                                                                                   >  SRR13385771.1141002/1‑301 (MQ=60)
                                                                                                                                                 ACTAGCCGTTTCCACGGTTTAACGGCTTGTGTACACTTTGACAGTCAATCAGCGTAGTGACTTCTTTTATCAGCGGAAACAACCATATCCATAAAAGAAACGTGATGGTCGTTCCCGTAGTTTATTAAGTAAGATGACAAATTATCCTTCTTTAGCCAATTGAAAACAAAACTTCTTAATCTGTTTCCAATGTTTTAAAGTCGCTCATATGTTCATGACTACTTTTCCATGAGAGGGTTCTATGAAAAGCATCATCTTATTTTCGCAACGCTGCGGGTTTAGGCTTTTCCGCTGGTCTCTT                                                                                                                                                           <  SRR13385771.1884351/301‑1 (MQ=60)
                                                                                                                                                        GTTTCCACTTTTTAACGGCTTGTGTACACTTTGACAGTCAATCAGCGTAGTGACTTCTTTTATCAGCGGAAACAACCATATCCATAAAAGAAACGTGATGGTCGTTCCCGTAGTTTATTAAGTAAGATGACAAATTATCCTTCTTTAGCCAATTGAAAACAAAACTTCTTAATCTGTTTCCAATGTTTTAAAGTAGCTCATATGTTCATGACTACTTTTCCATGAGAGGGTTCTATGAAAAGCATCATCTTATTTTCGCAACGCTGCGGGTTTAGGCTTTTCCGCTGGTCTCTTTTCTGTT                                                                                                                                                    >  SRR13385771.62348/1‑301 (MQ=60)
                                                                                                                                                         TTTCCACGTTTTGACGGCTTGTGTACACTTTGACATTCAAGCAGCGTAGTGACGTCTTTTATCAGCGGAAACAACCATATCCATAAAAGAAACGTGATGGTCGTTCCCGTAGTTTATTAAGTAAGATGACAAATTATCCTTCTTTAGCCAATTGAAAACAAATCTTCTTAATCTGTTTCCAGTGTTTTAAAGTCGCTCATATTTTCATGACTACTTGTCCATTAGAGGTTTCTATGAAATGCATCATCTTATTTTCGCAACGCTG                                                                                                                                                                                       <  SRR13385771.1691147/265‑1 (MQ=60)
                                                                                                                                                          TTCCACGTTTTAACGGCTTGTGTACACTTTGACAGTCAATCAGCGTAGTGACTTCTTTTATCAGCGGAAACAACCATATCCATAAAAGAAACGTGATGGTCGTTCCCGTAGTTTATTAAGTAAGATGACAAATTATCCTTCTTTAGCCAATTGAAAACAAAACTTCTTAATCTGTTTCCAGTGTTTTAAAGTCGCTCATATGTTCATGACTACTTTTCCATGAGAGGGTTCTATGAAAAGCATCAGCTTATTTTCGCAACGCTGCGGGTTTAGGCTTTTCCGCTGGTCTCTTTTCTGTTT                                                                                                                                                   <  SRR13385771.1370046/300‑1 (MQ=60)
                                                                                                                                                          TTCCACGTTTTAACGGCTTGTGTACACTTTGACAGTCAATCAGCGTAGTGACTTCTTTTATCAGCGGAAACAACCATATCCATAAAAGAAACGTGATGGTCGTTCCCGTAGTTTATTAAGTAAGATGACAAATTATCCTTCTTTAGCCAATTGAAAACAAAACTTCTTAATCTGTTTCCAATGTTTTAAAGTCGCTCATATGTTCATGACTACTTTTCCATGAGAGGGTTCTATGAAAAGCATCATCTTATTTTCGCAACGCTGCGGGTTTAGGCTTTTCCGCTGGTCTCTTTTCTGTTT                                                                                                                                                   >  SRR13385771.896979/1‑300 (MQ=60)
                                                                                                                                                                                                                        AGCGGAAACAACCATATCCATAAAAGAAACGTGATGGTCGTTCCCGTAGTTTATTAAGTAAGATGACAAATTATCCTTCTTTAGCCAATTGAAAACAAAACTTCTTAATCTGTTTCCAATGTTTTAAAGTCGCTCATATGTTCATGACTACTTTTCCATGAGAGGGTTCTATGAAAAGCATCATCTTATTTTCGCAACGCTGCGGGTTTAGGCTTTTCCGCTGGTCTCTTTTCTGTTTACAGTTCTGCCCGAATGTAAACAAATACTTTGCGAAAAGTAAATAATGTCTTCTGAAAAAAAA                                                                                    <  SRR13385771.1273934/301‑1 (MQ=60)
                                                                                                                                                                                                                        AGCGGAAACAACCATATCCATAAAAGAAACGTGATGGTCGTTCCCGTAGTTTATTAAGTAAGATGACAAATTATCCTTCTTTAGCCAATTGAAAACAAAACTTCTTAATCTGTTTCCAATGTTTTAAAGTCGCTCATATGTTCATGACTACTTTTCCATGAGAGGGTTCTATGAAAAGCATCATCTTATTTTCGCAACGCTGCGGGTTTAGGCTTTTCCGCTGGTCTCTTTTCTGTTTACAGTTCTGCCCGAATGTAAACAAATACTTTGCGAAAAGTAAATAATGTCTTCTGAAAAAAA                                                                                     >  SRR13385771.1427495/1‑300 (MQ=60)
                                                                                                                                                                                                                           GGAAACAACCATATCCATAAAAGAAACGTGATGGTCGTTCCCGTAGTTTATTAAGTAAGATGACAAATTATCCTTCTTTAGCCAATTGAAAACAAAACTTCTTAATCTGTTTCCAATGTTTTAAAGTCGCTCATATGTTCATGACTACTTTTCCATGAGAGGGTTCTATGAAAAGCATCATCTTATTTTCGCAACGCTGCGGTTTTAGGCTTTTCCGCTGGTCTCTTTTCTGTTTACAGTTCTGCCCGAATGTAAACAAATACTTTGCGAAAAGTAAATAATGTCTTCTGAAAAAAAAAAG                                                                                 <  SRR13385771.1799649/301‑1 (MQ=60)
                                                                                                                                                                                                                               ACAACCATATCCATAAAAGAAACGTTATGGTCGTTCCCGTAGTTTATTAAGTAAGATGAAAAATTATCCTTCTTTAGCCAATTGAAACCAAAACTTCTTAATCTGTTTCCAATGTTTTAAAGTCGCTCATATGTTCATGACTACTTTTCCATGAGAGGGTTCTATGAAAAGCATCATTTTATTTTCGCACCGCTGCGGGTTTAGGCTTTTCCGCTGGTCTCTTTTCTGTTAACAGTTCTGCCCGAATGTAAACAAATACTTTGCGAAAAGTAAATAATGTCTTCTG‑AAAAAAAAAAGAGAA                                                                            <  SRR13385771.1298925/301‑1 (MQ=60)
                                                                                                                                                                                                                                 AACCATATCCATAAAAGAAACGTGATGGTCGTTCCCGTAGTTTATTAAGTAAGATGACAAATTATCCTTCTTTAGCCAATTGAAAACAAAACTTCTTAATCTGTTTCCAATGTTTTAAAGTCGCTCATATGTTCATGACTACTTTTCCATGAGAGGGTTCTATGAAAAGCATCATCTTATTTTCGCAACGCTGCGGGTTTAGGCTTTTCCGCTGGTCTCTTTTCTGTTTACAGTTCTGCCCGAATGTAAACAAATACTTTGCGAAAGGTAAATAATGTCTTCTG‑AAAAAAAAAAGAGAAC                                                                           >  SRR13385771.788680/1‑300 (MQ=60)
                                                                                                                                                                                                                                   CCATATCCATAAAAGAAACGTGATGGTCGTTCCCGTAGTTTATTAAGTAAGATGACAAATTATCCTTCTTTAGCCAATTGAAAACAAAACTTCTTAGTCTGTTTCCAATGTTTTAAAGTCGCTCATATGTTCATGACTACTTTTCCATGAGAGGGTTCTATGAAAAGCATCATCTTATTTTCGCAACGCTGCGGGTTTAGGCTTTTCCGCTGGTCTCTTTTCTGTTTACAGTTCTGCCCGAATGTAAACAAATACTTTGCGAAAAGTAAATAATGTCTTCTG‑AAAAAAAAAAGAGAACTGT                                                                        <  SRR13385771.615305/301‑1 (MQ=60)
                                                                                                                                                                                                                                   CCATATCCATAAAAGAAACGTGATGGTCGTTCCCGTAGTTTATTAAGTAAGATGACAAATTATCCTTCTTTAGCCAATTGAAAACAAAACTTCTTAATCTGTTTCCAATGTTTTAAAGTCGCTCATATGTTCATGACTACTTTTCCATGAGAGGGTTCTATGAAAAGCATCATCTTATTTTCGCAACGCTGCGGGTTTAGGCTTTTCCGCTGGTCTCTTTTCTGTTTACAGTTCTGCCCGAATGTAAACAAATACTTTGCGAAAAGTAAATAATGTCTTCTG‑AAAAAAAAAAGAGAACTGT                                                                        <  SRR13385771.515267/301‑1 (MQ=60)
                                                                                                                                                                                                                                     ATATCCATAAAAGAAACGTGATGGTCGTTCCCGTAGTTTATTAAGTAAGATGACAAATTATCCTTCTTTAGCCAATTGAAAACAAAACTTCTTAATCTGTTTCCAATGTTTTAAAGTCGCTCATATGTTCATGACTACTTTTCCATGAGAGGGTTCTATGAAAAGCATCATCTTATTTTCGCAACGCTGCGGGTTTAGGCTTTTCCGCTGGTCTCTTTTCTGTTTACAGTTCTGCCCGAATGTAAACAAATACTTTGCGAACAGTAAATAATGTCTTCTGAAAAAAAAAAgagaaatgtc                                                                        >  SRR13385771.1659221/1‑290 (MQ=60)
                                                                                                                                                                                                                                             AATAGAAACGTGATTGTCGTTCCCGTAGTTTATTAAGTAATATGACAAATTATCCTTCTTTAGCCAATTGAAAACAAATCTTCTTAATCTGTTTCCAATGTTTTAAAGTCGCTCATATGTTCATGACTACTTTTCCATGAGAGGGTTCTATGAAAAGCATCATCTTATTTTCGCAACGCTGCGGGTTTAGGCTTTTCCGCTGGTCTCTTTTCTGTTTACAGTTCTGCCCGAATGTAAACAAATACTTTGCGAAAAGTAAATAATGTCTTCTG‑AAAAAAAAAAGAGAACTGTGAACAATGCT                                                              <  SRR13385771.1476967/301‑1 (MQ=60)
                                                                                                                                                                                                                                             AAAAGAAACGTGATGGTCGTTCCCGTAGTTTATTAAGTAAGATGACAAATTATCCTTCTTTAGCCGATTGAAAATAAAACTTCTTAATCTGTTTCCAATGTTTTAAAGTCGCTCATATGTTAATGACTACTTTTCCATGAGAGGGTTCTATGAAAAGCATCATCTTATTTTCGCAACGCTGCGGGTTTAGGCTTTTCCGCTGGTCTCTTTTCTGTTTACAGTTCTGCCCGAATGTAAACAAATACTTTGCGAAAAGTAAGTAATGTCTTCTG‑AAAAAAAAAAGAGAACTGTGAACAATGC                                                               <  SRR13385771.777685/300‑1 (MQ=60)
                                                                                                                                                                                                                                             AAAAGAAACGTGATGGTCGTTCCCGTAGTTTATTAAGTAAGATGACAAATTATCCTTCTTTAGCCAATTGAAAACAAAACTTCTTAATCTGTTTCCAATGTTTTAAAGTCGCTCATATGTTCATGACTACTTTTCCATGAGAGGGTTCTATGAAAAGCATCATCTTATTTTCGCAACGCTGCGGGTTTAGGCTTTTCCGCTGGTCTCTTTTCTGTTTACAGTTCTGCCCGAATGTAAACAAATACTTTGCGAAAAGTAAATAATGTCTTCTG‑AAAAAAAAAAGAGAACTGTGAACAATGCT                                                              <  SRR13385771.967999/301‑1 (MQ=60)
                                                                                                                                                                                                                                                                  CCCGTAGTTTATTAAGTAAGATGACAAATTTTCCTTCTTTAGCCAATTGAAAACAAAACTTCTTAATCTGTTTCCAATGTTTTAAAGTCGCTCATATGTTCATGACTACTTTTCCATGAGAGGGTTCTATGAAAAGCATCATCTTATTTTCGCAACGCTGCGGGTTTAGGCTTTTCCGCTGGTCTCTTTTCTGTTTACAGTTCTGCCCGAATGTAAACAAATACTTTGCGAAAAGTAAATAATGTCTTCTG‑AAAAAAAAAAGAGAACTGTGAACAATGCTTGATAGTTGTAGGAATATCTT                                         <  SRR13385771.1883409/301‑1 (MQ=60)
                                                                                                                                                                                                                                                                    CGTAGTTTATTAAGTAAGATGACAAATTATCCTTCTTTAGCCAATTGAAAACAAAACTTCTTAATCTGTTTCCAATGTTTTAAAGTCGCTCATATGTTCATGACTACTTTTCCATGAGAGGGTTCTATGAAAAGCATCATCTTATTTTCGCAACGCTGCGGGTTTAGGCTTTTCCGCTGGTCTCTTTTCTGTTTACAGTTCTGCCCGAATGTAAACAAATACTTTGCGAAAAGTAAATAATGTCTTCTG‑AAAAAACAAAGAGAACTGTGAACAATGCTTGATAGTATTAGGAATATATTA                                        >  SRR13385771.517916/1‑300 (MQ=60)
                                                                                                                                                                                                                                                                        GTTTATTAAGTAAGATGAAAAATTATCCTTCTTTAGCCAATTGAAAACACAACTTCTTAATCTGTTTCCAATGTTTTAAAGTCGCTCATATGTTCATGACTACTTTTCCATGAGAGGGTTCTATGAAAAGCATCATCTTATTTTCGCAACGCTGCGGGTTTAGGCTTTTCCGCTGGTCTCTTTTCTGTTTACAGTTCTGCCCGAATGTAAACAAATACTTTGCGAAAAGTAAATAATGTCTTCTG‑AAAAAAAAAAGAGAACTGTGAACAATGCTTGATAGTTGTAGGAATATCTTAAAAGA                                   <  SRR13385771.1765219/301‑1 (MQ=60)
                                                                                                                                                                                                                                                                         TTTATTAAGTAAGATGACAAATTATCCTTCTTTAGCCAATTGAAAACAAAACTTCTTAATCTGTTTCCAATGTTTTAAAGTCGCTCATATGTTCATGACTACTTTTCCATGAGAGGGTTCTATGAAAAGCATCATCTTATTTTCGCAACGCTGCGGGTTTAGGCTTTTCCGCTGGTCTCTTTTCTGTTTACAGTTCTGCCCGAATGTAAACAAATACTTTGCGAAAAGTAAATAATGTCTTCTG‑AAAAAAAAAAGAGAACTGTGAAAAATGCTTGATAGTTGTAGGAATATCTTAAAAGA                                   >  SRR13385771.1375361/1‑300 (MQ=60)
                                                                                                                                                                                                                                                                                                          AGCCAATTGAAAACAAAACTTCTTAATCTGTTTCCAATGTTTTAAAGTCGCTCATATGTTCATGACTACTTTTCCATGAGAGGGTTCTATGAAAAGCATCATCTTATTTTCGCAACGCTGCGGGTTTAGGCTTTTCCGCTGGTCTCTTTTCTGTTTACAGTTCTGCCCGAATGTAAACAAATACTTTGCGAAAAGTAAATAATGTCTTCTG‑AAAAAAAAAAGAGAACTGTGAACAATGCTTGATAGTTGTATGAATATCTTAAAAGAAAGGAAATAGATTAACTGGAAAATgtttttaat  >  SRR13385771.1344690/1‑291 (MQ=60)
                                                                                                                                                                                                                                                                                                            |                                                                                                                                                                                                                                                                                                          
GTGTAAGTGTTAGCAAGGACGGTGACGTGGTGTATGATAATGGATTTATGTGAAATGCTTCTTTTTTCTATTACCATATATAGAAAATAGGTGTATACTATTAGTTTAATGTAATAAGCAGGACTATGACAAACCAAAGAGTGAAAGTAGCCGTTTCCACGTTTTAACGGCTTGTGTACACTTTGACAGTCAATCAGCGTAGTGACTTCTTTTATCAGCGGAAACAACCATATCCATAAAAGAAACGTGATGGTCGTTCCCGTAGTTTATTAAGTAAGATGACAAATTATCCTTCTTTAGTCAATTGAAAACAAAACTTCTTAATCTGTTTCCAATGTTTTAAAGTCGCTCATATGTTCATGACTACTTTTCCATGAGAGGGTTCTACGAAAAGCATCATCTTATTTTCGCAACGCTGCGGGTTTAGGCCTTTCCGCTGGTCTCTTTTCTGTTTACAGTTCTGCCCGAATGTAAACAAATACTTTGCGAAAAGTAAATAATGTATTCTGAAAAAAAAAAAGAGAACTGTGAACAATGCTTGATAGTTGTAGGAATATCTTAGAAGAAAGGGGATAGATTATCTGGAAAATCGTTTGAAT  >  BK006934/384436‑385034

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 10 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑