Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A0 F0 I1 R1 6054 0.0 0 0.0% 0 0.0

Breseq alignment

N/A

GATK/CNVnator alignment

BRESEQ :: bam2aln output
TTTTATCAGCGGAAACAACCATATCCATAAAAGAAACGTGATGGTCGTTCCCGTAGTTTATTAAGTAAGATGACAAATTATCCTTCTTTAGTCAATTGAAAACAAAACTTCTTAATCTGTTTCCAATGTTTTAAAGTCGCTCATATGTTCATGACTACTTTTCCATGAGAGGGTTCTACGAAAAGCATCATCTTATTTTCGCAACGCTGCGGGTTTAGGCCTTTCCGCTGGTCTCTTTTCTGTTTACAGTTCTGCCCGAATGTAAACAAATACTTTGCGAAAAGTAAATAATGTATTCTGAAAAAAAAAAAGAGAACTGTGAACAATGCTTGATAGTTGTAGGAATATCTTAGAAGAAAGGGGATAGATTATCTGGAAAATCGTTTGAATAAAATAAGAACCAGTAATTCATTCGTTTAAATTGGAAAAACAAAACATAAAAGAACCAGCAATGTCTTGGTTGCCTGTTAATGTAAAAAGTTCTCCCAAAAGATGACAGGAAACTCGTTAACTCATACTCGGTATATAAGAGGAAACTTATCTAATGTTTCATTCATTCTTCCTCTTCTGCTTATTCGATGTCTATTGAAAA  >  BK006934/384645‑385236
                                                                                                                                                                                                                                                                                                      |                                                                                                                                                                                                                                                                                                         
TTTTATCAGCGGAAACAACCATATCCATAAAAGAAACGTGATGGTCGTTCCCGTAGTTTATTAAGTAAGATGACAAATTATCCTTCTTTAGCCAATTGAAAACAAAACTTCTTAATCTGTTTCCAATGTTTTAAAGTCGCTCATATGTTCATGACTACTTTTCCATGAGAGGGTTCTATGAAAAGCATCATCTTATTTTCGCAACGCTGCGGGTTTAGGCTTTTCCGCTGGTCTCTTTTCTGTTTACAGTTCTGCCCGAATGTAAACAAATACTTTGCGAAAAGTAAATAATGTCTTCTG                                                                                                                                                                                                                                                                                                      >  SRR13385772.263581/1‑300 (MQ=60)
  TTATCAGCGGAAACAACCATATCCATAATAGAAACGTGATGGTCGTTCCCGTAGTTTATGAAGTAAGATGACAAATTATCCTTCTTTAGCCAATTGAAAACAAAACTTCTTAATCTGTTTCCAATGTTTTAAAGTCGCTCATATGTTCATGACTACTTTTCCATGAGAGGGTTCTATGAAAAGCATCAGCTTATTTTCGCAACGCTGCGGGTTTAGGCTTTTCCGCTGGTCTCTTTTCTGTTTACAGTTCTGCCCGAATGTAAACAAATACTTTGCGAAAAGTAAATAATGTCTTCTGAA                                                                                                                                                                                                                                                                                                    <  SRR13385772.378410/300‑1 (MQ=60)
      CAGCGGAAACAACCATATCCATAAAAGAAACGTGATGGTCGTTCCCGTAGTTTATTAAGTAAGATGACAAATTATCCTTCTTTAGCCAATTGAAAACAAAACTTCTTAATCTGTTTCCAATGTTTTAAAGTCGCTCATATGTTCATGACTACTTTTCCATGAGAGGGTTCTATGAAAAGCATCATCTTATTTTCGCAACGCTGCGGGTTTAGGCTTTTCCGCTGGTCTCTTTTCTGTTTACAGTTCTGCCCGAATGTAAACAAATACTTTGCGAAAAGTAAATAATGTCGTCTGAAAAAAA                                                                                                                                                                                                                                                                                               <  SRR13385772.352252/301‑1 (MQ=60)
                    ATATCCATAAAAGAAACGTGATGGTCGTTCCCGTAGTTTATTAAGTAAGATGACACATTATCCTTCTTTAGCCAATTGAAAACAAAACTTCTTAATCTGTTTCAAATGTTTTAAAGTCGCTCATATGTTCATGACTACTTTTCCATGAGAGGGTTCTATGAAAAGCATCATCTTATTTTCGCAACGCTGCGGGTTTAGACTTTTCCGCTGGTCTCTTTTCTGATTACAGTTCTGCCCGAATGTAAACAAATACTTTGCGAAAAGTAAATAATGTCTTCTGAAAAAAcaaagagacccgtg                                                                                                                                                                                                                                                                                  >  SRR13385772.1125635/1‑286 (MQ=60)
                    ATATCCATAAAAGAAACGTGATGGTCGTTCCCGTAGTTTATTAAGTAAGATGAAAAATTATCCTTCTTTAGCCAATTGAAAACAAAACTTCTTAATCTGTTTCCAATGTTTTAAAGTCGCTCATATGTTCATGACTACTTTTCCATGAGAGGGTTATATGAAAAGCATCATATTATTTTCGCAACGCTGCGGGTTTAGGCTTTTAAGCTGGTCTATTTTCTGTTTACAGTTCTGCCCACATGTAAAAAACTAATTTGCGAAAAGTCAATAAAGTCTTCTG‑AAAAAAAAAAGAGAACTATG                                                                                                                                                                                                                                                                                 >  SRR13385772.254036/1‑300 (MQ=60)
                      ATCCATAAAAGAAACGTGATGGTCGATCCCGTAGTTTCTTAAGTAAGATGACAAATTATCCTTCTTTAGCCAATTGAAAACAAAACTTCTTAATCTGTTTCCAATGTTTTAAAGTCGCTCCTATGTTCATGACTACTTTTCCATGAGAGGGTTCTATGAACAGCATCATCTTATTTTAGCAACGCTGCGGGTTGCGGCTTTTCCGCTGGTCTCTTTTCTGTTTACAGTTCTCCCCGACTGTAAACAAATACTTAGCGAACAGTAATTAATGTCTTCTGTAAAAAAcatgataaatacaaa                                                                                                                                                                                                                                                                                >  SRR13385772.814632/1‑285 (MQ=60)
                              AAGAAACGTGATGGTCGTTGCCGTAGTTTGTTAAGTATGATGACAAATTATCCTTCTTTAGCCAATTGAAATCAAAACTTCTTAATCTGTTTCCAATGTTTTAAAGTCGCTCATATGTTCATGACTACTTTTCCATGAGAGGGTTCTATGAAAATCATCATCTTATTTTCGCAACGCTGCAGGTTTAGGCTTTTCCGCTGGTCTCTTTTCTGTTTACAGTTCTGCCCGAATGTAAACAAATACTTTGCGAAAAGTAAATAATGTCTTCTG‑AAAAAAAAAAGAGAACTGTGAACAATGCTTG                                                                                                                                                                                                                                                                      <  SRR13385772.379357/301‑1 (MQ=60)
                                   ACGTGATGGTCGTTCCCGTAGTTTATTAAGTAAGATGACAAATTATCCTTCTTTAGCCAATTGAAAACAAAACTTCTTAATCTGTTTCCAATGTTTTAAAGTCGCTCATATGTTCATGACTACTTTTCCATGAGAGGGTTCTATGAAAAGCATCATCTTATTTTCGCAACGCTGCGGGTTTAGGCTTTTCCGCTGGTCTCTTTTCTGTTTACAGTTCTGCCCGAATGTAAACAAATACTTTGCGAAAAGTAAATAATGTCTTCTG‑AAAAAAAAAAGAGAACTGTGAACAATGCTTGATAGT                                                                                                                                                                                                                                                                 <  SRR13385772.809350/301‑1 (MQ=60)
                                               TTCCCTGAGTTTATTAAGTAAGATGACAAATTATCCTTCTTTAGCCAATTGAAAACAAAACTTCTTAATCTGTTTCCAATGTGTGAAAGTCGCTCATAGGTTCATGACTACTTTTCCATGAGAGGGTTCTATGAAAAGCATCATCTTATTTTCGCAACGCTGCGGGTTGAGGCTTTTCCGCTGGTCTCTTTTCTGTTTACAGTTCTGCCCGAATGTAAACAAATACTTTGCGAAAAGTAAATAATGTCTTCTG‑AAAAAAAAAAGATAACTGTGAACAATGCTTGATAGTTGTAGGAATAT                                                                                                                                                                                                                                                      <  SRR13385772.892239/300‑1 (MQ=60)
                                                        TTTATTAAGTAAGATGACAAATTATCCTTCTTTAGCCAATTGAAAACAAAACTTCTTAATCTGTTTCCAATGTTTTAAAGTCGCTCATATGTTCATGACTACTTTTCCATGAGAGGGTTCTATGAAAAGCATCATCTTATTTTCGCAACGCTGCGGGTTTAGGCTTTTCCGCTGGTCTCTTTTCTGTTTACAGTTCTGCCCGAATGTAAACAAATACTTTGCGAAAAGTAAATAATGTCTTCTG‑AAAAAAAAAAGAGAACTGTGAACAATGCTTGATAGTTGTAGGAATATCTTAAAAGA                                                                                                                                                                                                                                             >  SRR13385772.535271/1‑300 (MQ=60)
                                                                  AAGATGACAAATTATCCTTCTTTAGACAATTGAAAACAAAACTTCTTAATCTGTTTCCAATGTTTTAAAGTCGCTCATATGTTCATGACTACTTTTCCATGAGAGGGTTCTATGAAAAGCATCATCTTATTTTCGCAACGCTGCGGGTTTAGGCTTTTCCGCTGGTCTCTTTTCTGTTTACAGTTCTGCCCGAATGTAAACAAATACTTTGCGAAAAGTAAATAATGTCTTCTG‑AAAAAAAAAAGAGAACTGTGAACAATGCTTGATAGTTGTAGGAATATCTTAAAAGAAAGGAGATAG                                                                                                                                                                                                                                   <  SRR13385772.730042/300‑1 (MQ=60)
                                                                   AGATGACAAATTTACCTTCTTTAGCCAATTGAAAACAAAACTTCTTAATCTGTTTCCAATGTTTTAAAGTCGCTCATATTTTCATGACTACTTTTCCATGAGAGGGTTCTATTAAAAGCATCATCTTATTTTCGCAACGCTGCGGGTTTAGGCTTTGCCGCTGGGCTCTTTTCTGTTTACAGTTCTGCCCGAAGGTAAACAAATACTTTGCGAAAAGTAAATAATGTCTTCTG‑AAAAAAAAAAGAGAACTGTGAACAATGCTTGATAGTTGTAGTAATATCTTAAAATAAAGGAGATAGAT                                                                                                                                                                                                                                 <  SRR13385772.629417/301‑1 (MQ=60)
                                                                     gaaACAAATTATCCTTCTTTCGCCAATTGAAAACAAAACTTCTTAATCTGTTTCCAATGTTTTAAAGTCGCTCATATGTTCATGACTACTTTTCCATGAGAGGGTTCTATGAAAAGCATCATCTTATTTTCGCAACGCTGCGGGTTTAGGCTTTTCCGCTGGTCTCTTTTCTGTTTACAGTTCTGCCCGAATGTAAACAAATACTTTGCGAAAAGTAAATAATGTCTTCTG‑AAAAAAAAAAGAGAACTGTGAACAATGCTTGATAGTT                                                                                                                                                                                                                                                                <  SRR13385772.1220997/265‑1 (MQ=60)
                                                                          AAATTATCCTTCTTTAGCCAATTGAAAACAAAACTTCTTAATCTGTTTCCAATGTTTTAAAGTCGCTCATATGTTCATGACTACTTTTCCATGAGAGGGTTCTATGAAAAGCATCATCTTATTTTCGCAACGCTGCGGGTTTAGGCTTTTCCGCTGGTCTCTTTTCTGTTTACAGTTCTGCCCGAATGTAAACAAATACTTTGCGAAAAGTAAATAATGTCTTCTG‑AAAAAAAAAAGAGAACTGTGAACAATGCTTGATAGTTGTAGGAATATCTTAAAAGAAAGGAGATAGATTATCTGG                                                                                                                                                                                                                          <  SRR13385772.258126/301‑1 (MQ=60)
                                                                                 agaagttttgcCAATTGAAAACAAAACTTCTTAATCTGTTTCCAATGTTTTAAAGTCGCTCATATGTTCATGACTACTTTTCCATGAGAGGGTTCTATGAAAAGCATCATCTTATTTTCGCAACGCTGCGGGTTTAGGCTTTTCCGCTGGTCTCTTTTCTGTTTACAGTTCTGCCCGAATGTAAACAAATACTTTGCGAAAAGTAAATAATGTCTTCTG‑AAAAAAAAAAGAGAACTGTGAACAATGCTTGATAGTTGTAGGAATATCTTAAAAGAAAGGAGATAGATT                                                                                                                                                                                                                                <  SRR13385772.730856/277‑1 (MQ=60)
                                                                                    TCTTTAGCCAATTGAAAACAAAACTTCTTAATCTGTTTCCAATGTTTTAAAGTCGCTCATATGTTCATGACTACTTTTCCATGAGAGGGTTCTATGAAAAGCATCATCTTATTTTCGCAACGCTGCGGGTTTAGGCTTTTCCGCTGGTCTCTTTTCTGTTTACAGTTCTGCCCGAATGTAAACAAATACTTTGCGAAAAGTAAATAATGTCTTCTG‑AAAAAAAAAAGAGAACTGTGAACAATGCTTGATAGTTGTAGGAATATCTTAAAAGAAAGGAGATAGATTATCTGGAAAATCGTTT                                                                                                                                                                                                                >  SRR13385772.530133/1‑301 (MQ=60)
                                                                                          GCCAATTGAAAACAAAACTTCTTAATCTGTTTCCAATGTTTTAAAGTCGCTCATATGTTCATGACTACTTTTCCATGAGAGGGTTCTATGCAAAGCATCATCTTATTTTCGCAACGCTGCGGGTTTAGGCTTTTCCGCTGGTCTCTTTTCTGTTTACAGTTCTGCCCGACTGTAAACAAATACTTTGCGAAAAGTAAATAATGTCTTCTG‑AAAAAAAACAGAGAACTGTGAACAATGCTTGATAGTTGTAGGAATATCTTAAAAGAAAGGAGATAGATTATCTGGAAAATCGTTTGAATA                                                                                                                                                                                                           >  SRR13385772.1114009/1‑300 (MQ=60)
                                                                                                 GAAAACAAAACTTCTTAATCTGTTTCCAATGTTTTAAAGTCGCTCATATGTTCATGACTACTTTTCCATGAGAGGGTTCTATGAAAAGCATCATCTTATTTTCGCAACGCTGCGGGTTTAGGCTTTTCCGCTGGTCTCTTTTCTGTTTACAGTTCTGCCCGAATGTAAACAAATACTTTGCGAAAAGTAAATAATGTCTTCTG‑AAAAAAAAAAGAGAACTGTGAACAATGCTTGATAGTTGTAGGAATATCTTAAAAGAAAGGAGATAGATTATCTGGAAAATCGTTTGAATAAAATAAG                                                                                                                                                                                                    <  SRR13385772.696886/300‑1 (MQ=60)
                                                                                                 GAAAACAAAACGTCGTAATCTGTTGCCAATGTTTGAAAGTCGCTCATAGGTTCATGACTACTTTTCCATGAGATGGTTCTAGGAAAAGCATCATCTTATTTTCGCAACGCTGCGGTGTTAGGCTTTTCCGCTGGTCTCTTTTCTGTTTACAGTTCGGCCCGAATGTAAACAAATACTTTGCGAAAAGGAAATAATGTCTTCTG‑AAAAAAAAAAGAGAACTGTTAACAAGGCTTGATAGTTGTAGGAATATCTTAAAAGAAAGGAGATAGATTATCTGGAAAATCGTTTGAAGAAAATAAG                                                                                                                                                                                                    <  SRR13385772.1213476/300‑1 (MQ=60)
                                                                                                   ATACAAAACTTCTTAATCTGTTTCCAATGTTTTAAAGTCGCTCATATGTTCATGACTACTTTTCCATGAGAGGGTTCTATGAAAAGCATCATCTTATTGTCGCAACTCTGCGGGTTTAGGCTTTTCCGCTGGTCTCTTTTCTGTTTACAGTTCTGCCCGAATGTAAACAAATACTTTGCGAAAAGTAAATAATGTCTTCTGAAAAAAAAAAgcgaaccgtgcacaatgcttgcccgtcgtaggccccccccccacgccccccccccccccccccccccccccccccccccccccccccccc                                                                                                                                                                                                  <  SRR13385772.810124/301‑91 (MQ=60)
                                                                                                   AAACAAAACTTCTTAATCTGTTTCCAATGTTTTAAAGTCGCTCATATGTTCATGACTACTTTTCCATGAGAGGGTTCTATGAAAAGCATCATCTTATTTTCGCAACTCTGCGGGTTTAGGCTTTTCCGCTGGTCTCTTTTCTGTTTACAGTTCTGCCCGAATGTAAACAAATACTTTGCGAAAAGTAAATAATGTCTTCTG‑AAAAAAAAAAGAGAACTGTGAACAATGCTTGATAGTTGTAGGAATATCTTAAAAGAAAGGAGATAGATTATCTGGAAAATCGTTTGAATAAAATAAGAAC                                                                                                                                                                                                 <  SRR13385772.810104/301‑1 (MQ=60)
                                                                                                    AACAAAACTTCTTAATCTGTTTCCAATGTTTTACAGTCGCTCATATGTTCATGACTACTTTTCCATGAGAGGGTTCTATGAAAAGCATCATCTTATTTTCGCAACGCTGCGGGTTTAGGCTTTTCCGCTGGTCTCTTTTATGTTTACAGTTCTGCCCGAATGTAAACAAATACTTTGCGAAAAGTAAATAATGTCTTATG‑AAAAAAAAAAGAGAACTGTGAACAATGCTTGATAGAAGAAGGAACATCTTACAAGAAAGGAGATAGATTAACAGGAAACACGTTTGAATAAAATAAGAAC                                                                                                                                                                                                 >  SRR13385772.477995/1‑300 (MQ=60)
                                                                                                        AAACTTCGTAATCTGTTTCCAATTTTTTAAAGTCGGTCATATTTTCATGACTACTTTTCCATGGGAGGGTTCTATGAAAAGCATCATCTTATTTTCGCAACGCTGCGGGTTTAGGCTTTTCCGCTGGTCTCTTTTCTGTTTACAGTGCTGTCCGAATGTAAACAAATACTTTGCGAAAAGTAAATAATGTCTTCTG‑AAAAAAAAAAGAGAACTGTGAACAATGCTTGATAGTTGTAGGAATATCTTAAAAGAAAGGAGATAGATTATCTGGAAAATCG‑TTGAATAAAATAAGAACCAGTAA                                                                                                                                                                                           <  SRR13385772.624942/301‑1 (MQ=60)
                                                                                                                                    taggttgaTCATATGTTCATGGCTACTTTTCCATGCGGGGGTTTTGTGAGAAGCATCGTCTTGTTTTCGCTACGCTGCGGGTTTAGGCTTTTCCGCTGGTCTCTTTTCTGTTTACAGTTCTGCCCGAATGTAAACAAATACTTTGCGAAAAGTAAATAATGTCTTCTGAGAAAAAAAAAGAGAACTGTGAACAATGCTTGATAGTTGTAGGAATATCTTAAAAGAAAGGGGATAGATTATCTGGAAAATCGTTTGAATAAAATAAGAACCGGTTATATATTCGTTTAAATTGGAAAAACA                                                                                                                                                                  <  SRR13385772.472162/292‑1 (MQ=60)
                                                                                                                                                        gcatactttgcgctggGAGGGTTCTATGAAAAGCATCATCTTATTTTCGCAACGCTGCGGGTTTGGGCTTTTACGCTGGTCTCTTTTCTGTTTACAGTTCTGCCCGAATGTAAGCAAATAATTTGCGAAAAGTAAAAAATGGCTTCTG‑AAAAAAAAAAGAGAACTGTGAACAGTGCTTGATAGTTGTAGGAATATCTTAAAAGAAAGGAGATAGATTATCTGGAAAGTCGTTTGAATAAAATAAGAACCAGTAATTTATTCGTTTAAATTGGAAAAACAAAACATAAAAGAACCAGCAAT                                                                                                                                             <  SRR13385772.142178/284‑1 (MQ=60)
                                                                                                                                                                                       AGCATCATCTTATTTTCGCAACGCTGCGGGTTTAGGCTTTTCCGCTGGTCTCTTTTCTGTTTACAGTTCTGCCCGAATGTAAACAAATACTTTGCGAAAAGTAAATAATGTCTTCTG‑AAAAAAAAAAGAGAACTGTGAACAATGCTTGATAGTTGTAGGAATATCATAAAAGAAAGGAGATAGATTATCTGGAAAATCGTTTGAATAAAATAAGAACCAGTAATTTATTCGTTTAAATTGGAAAAACAAAACATAAAAGAACCAGCAATGTCTTGGTTGCCTGTTAATGTAAAAAGTTCTC                                                                                                             <  SRR13385772.564106/301‑1 (MQ=60)
                                                                                                                                                                                          ATCATCTTATTTTCGCAACGCTGCGGGTTTAGGCTTTTCCGCTGGTCTCTTTTCTGTTTACAGTTCTGCCCGAATGTAAACAAATACTTTGCGAAAAGTAAATAATGTCTTCTGAAAAAAAAAAAGAGAACTGTGAACAATGCTAGATAGTAGTAGGAATATCTTAAAAGAAAGGAGATAGCTTATCGGGAAAATCGTTTGAATAAAAAAAGAACCAGTAATTtaagatcggaagagcacaagtctgaacacaagccaaggcaaacgcaacacaatcaaacactcaaattacaaaaaaaa                                                                                                            >  SRR13385772.1116381/1‑223 (MQ=60)
                                                                                                                                                                                              TCTTATTTTCGCAACGCTGCGGGTTTAGGCTTTTCCGCTGGTCTCTTTTCTGTTTACAGTTCTGCCCGAATGTAAACAAATACTTTGCGAAAAGTAAATAATGTCTTCTG‑AAAAAAAAAAGAGAACTGTGAACAATGCTTGATAGTTGTAGGAATATCTTAAAAGAAAGGAGATAGATTATCTGGAAAATCGTTTGAA                                                                                                                                                                                                             >  SRR13385772.1167654/1‑198 (MQ=60)
                                                                                                                                                                                                     TTCGCAACGCTGCGGGTTTAGGCTTTTCCGCTGGTCTCTTTTCTGTTTACAGTTCTGCCCGAATGTAAACAAATCCTTTGCGAAAAGTAAATAATGTCTTCTG‑AAAAAAAAAAGAGAACTGTGACAAATGCTTGCTAGTTGTAGGAATATATTAAAAGACAGGAGATAGATTATCTGGAAAATCGTTTGAATAAAATAAGAAACAGTAATTTATTAGTTTAACTTGGAAAAACAAAACATAAAAGAACCAGACATGTCTAGGTTGCCTGTTAATGTAACACGTTCTCCCCAAAGATGACTG                                                                                               >  SRR13385772.1120521/1‑301 (MQ=60)
                                                                                                                                                                                                            CGCTGCGGGTTTAGGCTTTTCCGCTGGTCTCTTTTCTGTTTACAGTTCTGCCCGAATGTAAACAAATACTTTGCGAAAAGTAAATAATGTCTTCTG‑AAAAAAAAAAGAGAACTGTGAACAATGCTTGATAGTTGTAGGAATATCTTAAAAGAAAGGAGATAGATTATCTGGAAAATCGTTTGAATAAAATAAGAACCAGTAATTTATTCGTTTAAATTGGAAAAACAAAACATAAAAGAACCAGCAATGTCTTGGTTGCCTGTTAATGTAAAAAGTTCTCCCAAAAGATGACAGGAAACTC                                                                                        <  SRR13385772.823095/301‑1 (MQ=60)
                                                                                                                                                                                                                               TCCGCTGGTCTCTTTTCTGTTTACAGTTCTGCCCGAATGTAAACAAATACTTTGCGAAAAGTAAATAATGTCTTCTG‑AAAAAAAAAAGAGAACTGTGAACAATGCTTGATAGTTGTAGGAATATCTTAAAAGAAAGGAGATAGATTATCTGGAAAATCGTTTGAATAAAATAAGAACCAGTAATTTATTCGTTTAAATTGGAAAAACAAAACATAAAAGAACCAGCAATGTCTTGGTTGCCTGTTAATGTAAAAAGTTCTCCCAAAAGATGACAGGAAACTCGTTAACTCATACTCGGTAT                                                                     >  SRR13385772.445549/1‑301 (MQ=60)
                                                                                                                                                                                                                                                        GTTCTGCCCGAATGTAAACAAATACTTTGCGAAAAGTCAATAATGTCTTATG‑CAAAAAACAAGAGAACTGTGAACAATGCTTGATCGTTGTAGGAATATCTTAAAAGAAAGGAGATAGATTATCTGGACAATCGTTTGCATAAAATAAGAACCAGTAAATTATTCGTTTAAATTGGAAAAACAAAACATAAAAGAACCAGCAATGTCTTGGTTGCATGTTCATGTAAAAAGTTATCCCAAAAGATGACAGGAAACTCGTTAACTCATACTCGGTCTATAAGAGGAAACTTATTTAATGATT                                            >  SRR13385772.1007016/1‑301 (MQ=60)
                                                                                                                                                                                                                                                                    TGTAAACAAATACTTTGCGAAAAGTAAATAATGTCTTCTG‑AAAAAAAAAAGAGAACTGTGAACAATGCTTGATAGTTGTAGGAATATCTTAAAAGAAAGGAGATAGATTATCTGGAAAATCGTTTGAATAAAATAAGAACCAGTAATTTATTCGTTTAAATTGGAAAAACAAAACATAAAAGAACCAGCAATGTCTTGGTTGCCTGTTAATGTAAAAAGTTCTCCCAAAAGATGACAGGAAACTCGTTAACTCATACTCGGTATATATGAGGAAACTTATTTAATGTTTCATTCATTCTTC                                >  SRR13385772.82969/1‑301 (MQ=60)
                                                                                                                                                                                                                                                                          AAAATACTTTGCGAAAAGTAAATAATGTCTGCTG‑‑AAAAAAAAAGATAACTGTGAACAATGCTTGATAGTTGTAGGAATATCTTAAAAGAAAGGAGATAGATTATCTGGAAAATCGTTTGAATAAAATAAGAACCAGTAATTTATTCGTTTAAATTGGAAAAACAAAACATAAAAGAACCAGCAATGTCTTAGTTGCCTGTTAATGTAAAAAGTTCTCCCAAAAGATGACAGGAAACTCGTTAACTCATACTCGGTATATAAGAGGAAACTTATTTAATGTTTCATTCATTCTTCCTCTTCT                         <  SRR13385772.765175/301‑1 (MQ=60)
                                                                                                                                                                                                                                                                            AATACTTTGCGAAAAGTAAATAATGTCTTCTG‑AAAAAAAAAAGAGAACTGTGAACAATGCTTGATAGTTGTAGGAATATCTTAAAAGAAAGGAGATAGATTATCTGGAAAATCGTTTGAATAAAATAAGAACCAGTAATTTATTCGTTTAAATTGGAAAAACAAAACATAAAAGAACCAGCAATGTCTTGGTTGCCTGTTAATGTAAAAAGTTCTCCCAAAAGATGACAGGAAACTCGTTAACTCATACTCGGTATATAAGAGGAAACTTATTTAATGTTTCATTCATTCT                                  >  SRR13385772.534545/1‑291 (MQ=60)
                                                                                                                                                                                                                                                                               ACTTTGCGAAAAGTAAATAATGTCTTCTG‑AAAAAAAAAAGAGAACTGTGAACAATGCTTGATAGTTGTAGGAATATCTTAAAAGAAAGGAGATAGATTATCTGGAAAATCGTTTGAATAAAATAAGAACCAGTAATTTATTCGTTTAAATTGGAAAAACAAAACATAAAAGATCCAGCAATGTCTTGGTTGCCTGTTAATGTAAAAAGTTCTCCCAAAAGATGACAGGAAACTCGTTAACTCATACTCGGTATATAAGAGGAAACTTATTTAATGTTTCATTCATTCTTCCTCTTCTGCTT                     >  SRR13385772.754456/1‑301 (MQ=60)
                                                                                                                                                                                                                                                                                   TGCGAAAAGTAAATAATGTCTTCTG‑AAAAAAAAAAGAGAACTGTGAACAATGCTTGATAGTTGTAGGAATATCTTAAAAGAAAGGAGATAGATTATCTGGAAAATCGTTTGAATAAAATAAGAACCAGTAATTTATTCGTTTAAATTGGAAAAACAAAACATAAAAGAACCAGCAATGTCTTGGTTGCCTGTTAATGTAAAAAGTTCTCCCAAAAGATGACAGGAAACTCGTTAACTCATACTCGGTATATAAGAGGAAACTTATTTAATGTTTCATTCATTCTTCCTCTTCTGCTTATT                  <  SRR13385772.1166767/300‑1 (MQ=60)
                                                                                                                                                                                                                                                                                         AAGTAAATAATGTCTTCTG‑AAAAAAAAAAGAGAACTGTGAACAATGCTTGATCGTTGTCGGCATATCTTAAAAGAAAGGAGATAGATTATCTGGAAACTCGTTTGAATAAAATAAGCACCAGTACTTTATTAGTTTAAATTGGAAAAAAAAAACATAAAAGAACCAGCAATGTCTTGGTAGCCTGTTAATGTAAACAGTTCACACAACAGCAGACAGGAAACTCGTTAACTCATACTCGGTATATAAGCGGAAACTTATTCAATGTTCCATTCATTCTTACTCTTCTGCTTATTCGATGTC           >  SRR13385772.220107/1‑301 (MQ=60)
                                                                                                                                                                                                                                                                                               ATAATGTCTTCTG‑AAAAAAAAAAGAGAACTGTGAACAATGCTTGATAGTTGTAGGAATATCTTAAAAGAAAGGCGATAGATTATCTGGAAAATCGTTTGAATAAAATAAGAACCAGTAATTTCTTCGTTTAAATTGGAAAAACAAAACATAAAAGAACCAGCAATGTCTTGGTTGCATGCTAATGTAAAAAGTTCTCCCAAAAGATGACAGGAAACTCGTTAACTCATACTCGGTATCTAAGAGGAAACTTATTTAATGTTTCATTCCTTCTTCCTCTTCTGCTTATTCGCTGTCTATTG      >  SRR13385772.898466/1‑300 (MQ=60)
                                                                                                                                                                                                                                                                                                  ATGTATTCTG‑AAAAAAAAAAGAGAACTGTGAACAATGCTTGATAGTTGTAGGAATATCTTAAAAGAAAGGAGATAGATTATCTGGAAAATCGTTTGAATAAAATAAGAACCAGTAATTTATTCGTTTAAATTGGAAAAACAAAACATAAAAGAACCAGCAATGTCTTGGTTGCCTGTTAATGTAAAAAGTTCTCCCAAAAGATGACAGGAAACTCGTTAACTCATACTCGGTATATAAGAGGAAACTTATTTAATGTTTCATTCATTCTTCCTCTTCTGCTTATTCGATGTCTATTGAAAA  <  SRR13385772.140499/301‑1 (MQ=60)
                                                                                                                                                                                                                                                                                                      |                                                                                                                                                                                                                                                                                                         
TTTTATCAGCGGAAACAACCATATCCATAAAAGAAACGTGATGGTCGTTCCCGTAGTTTATTAAGTAAGATGACAAATTATCCTTCTTTAGTCAATTGAAAACAAAACTTCTTAATCTGTTTCCAATGTTTTAAAGTCGCTCATATGTTCATGACTACTTTTCCATGAGAGGGTTCTACGAAAAGCATCATCTTATTTTCGCAACGCTGCGGGTTTAGGCCTTTCCGCTGGTCTCTTTTCTGTTTACAGTTCTGCCCGAATGTAAACAAATACTTTGCGAAAAGTAAATAATGTATTCTGAAAAAAAAAAAGAGAACTGTGAACAATGCTTGATAGTTGTAGGAATATCTTAGAAGAAAGGGGATAGATTATCTGGAAAATCGTTTGAATAAAATAAGAACCAGTAATTCATTCGTTTAAATTGGAAAAACAAAACATAAAAGAACCAGCAATGTCTTGGTTGCCTGTTAATGTAAAAAGTTCTCCCAAAAGATGACAGGAAACTCGTTAACTCATACTCGGTATATAAGAGGAAACTTATCTAATGTTTCATTCATTCTTCCTCTTCTGCTTATTCGATGTCTATTGAAAA  >  BK006934/384645‑385236

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑