Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A0 F0 I1 R1 6054 0.0 0 0.0% 0 0.0

Breseq alignment

N/A

GATK/CNVnator alignment

BRESEQ :: bam2aln output
CGTCGTTTCTTCCACTACTGAAAAGATAACAGAGGTTTCAACGGTGTCAGCTTCAGAACAAGTTAGTGCTACTCAAACAAACTCATTGGTTTCTACTTCTACTGTTTCCACTATCAGTCCAACGATTTCATCTGGTTCTTCAACATCCTCTAGCTCTACATACGATATCGAATCATCTCAAAGTATCGAATCGTCAGGTACATCTTCCGCTACAGCCGAACCATCTGCGTCTTCAGGTTTTCGTTTGACTTCTAGTTCTGCTTTTGTTTCATCTACTGCACCTTTCTCTTCCCAACTTTCTTCATCTTCATCTTCTGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑AA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TCATCCTCATCATT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TTCAACATCAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CATCATCTGCCCCTCTTTCCTTAACTTCTTCTTCTTCTTCTTCTTCTTCTTTCGCCACTATTATTACCTTGGCACCATCGAGCTCAAAAAGCGGAAACTCTCAACTAACTTTGGCGTCATCGTCTTCCACTTCCGCAGTTGAGTCATCCCAAACAGGGTCCACTATAGCAAGAACTACCTCTACACTGGTACCCTCTTCTAGCGTAGATACAACGTC  >  BK006934/385725‑386288
                                                                                                                                                                                                                                                                                                   |                                                                                                                                                                                                                                                                                                                                                                                         
CGTCGTTTCTTCCACTACTGAAAAGATAACAGAGGTTTCAACGGTGTCAGCTTCAGAACATGTTAGTGCTACTCAAACAAACTCATTGGTTTCTACTTCTACTGTTTCCACTATCAGTCCAACGATTTCATCTGGTTCTTCAACATCCTCTAGCTCTACATACGATATCGAATCATCTCAAAGTATCGAATCGTCAGGTACATCTTCCGCTACAGCCGAACCATCTGCGTCTTCAGGTTTTCGTTTGACTTCTAGTTCTGCTTTTGTTTCATCTATTGCACCTTTCTCTTCTCAACTTTCT                                                                                                                                                                                                                                                                                                                                                                                  <  SRR13385772.128728/301‑1 (MQ=60)
         TTCCACTACTGAAAAGATAACAGAGGTTTCAACGGTGTCAGCTTCAGAACATGTTAGTGCTACTCAAACAAACTCATTGGTTTCTACTTCTACTGTTTCCACTATCAGTCCAACGATTTCATCTGGTTCTTCAACATCCTCTAGCTCTACATACGATATCGAATCATCTCAAAGTATCGAATCGTCAGGTACATCTTCCGCTACAGCCGAACCATCTGCGTCTTCAGGTTTTCGTTTGACTTCTAGTTCTGCTTTTGTTTCATCTATTGCACCTTTCTCTTCTCAACTTTCTTCATCTTC                                                                                                                                                                                                                                                                                                                                                                          <  SRR13385772.721867/300‑1 (MQ=60)
                         ATAACAGAGGTTTCAACGGTGTCAGCTTCAGAACATGTTAGTGCTACTCAAACAAACTCATTGGTTTCTACTTCTACTGTTTCCACTATCAGTCCAACGATTTCATCTGGTTCTTCAACATCCTCTAGCTCTACATACGATATCGAATCATCTCAAAGTATCGAATCGTCAGGTACATCTTCCGCTACAGCCGAACCATCTCCGTCTTCAGCTTTTCGTTTTACTTCTAGTTCTCCTTTTGTTTCATCCATTGCACCTTTCTCTTCTCAACTTTCTTCATCTTCATCTTCTTA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑AA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TCAC                                                                                                                                                                                                                                                                                          >  SRR13385772.1045164/1‑301 (MQ=60)
                                                                                           TCTACTTCTACTGTTTCCACTATCAGTCCAACGATTTCATCTGGTTCTTCAACATCCTCTAGCTCTACATACGATATCGAATCATCTCAAAGTATCGAATCGTCAGGTACATCTTCCGCTACAGCCGAACCATCTGCGTCTTCAGGTTTTCGTTTGACTTCTAGTTCTGCTTTTGTTTCATCTATTGCACCTTTCTCTTCTCAACTTTCTTCATCTTCATCTTCTGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑AA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TCATCCTCATCATT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CTCAACATCAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CCTCATCattctcaacatcatcatcatctgcccctctttcctta                                                                                                                                                                               <  SRR13385772.1262626/300‑38 (MQ=60)
                                                                                             TACTTCTACTGTTTCCACTATAAGTCAAACGATTTCATCTGGTTCTTCAACATCCTCTAGCTCTACATACGATATCGAATCATCTAAAAGTATCGAATCGTCAGGTACATATTCAGCTACAGACGAACCATATGCATCTTACGATTTTAGTTTGACTTCTAGTTCTGCTTTTAATTCCACTATTGCACCTTTCTATTCTCAAATACCTTCATCTTCATCTTATGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑AA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TCATCATAATCATT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CTCACCATCAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CCTCATCattatcaacatcatcataatctgcaaatctttaattaact                                                                                                                                                                            >  SRR13385772.1151186/1‑261 (MQ=60)
                                                                                                       GTTTCCACTATCAGTCCAACGATTTCATCTGGTTCTTCAACATCCTCTAGCTCTACATACGATATCGAATCATCTCAAAGTATCGAATCGTCCGGTACATCTTCCGCTAAAGCCGCACCATCTGCGTCTTCAGGTTTTCGTTTGACTTCTAGTTCTGCTTTTGTTTCATCTATTGCACCTTTCTCTTCTCAACTTTCTTCCTCTTCATCTTCTGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TCATCCTCATacttctacacttcctcctcatcattctaaccatcataatcatctgccactctttccttaaatctttattctt                                                                                                                                                                                                            >  SRR13385772.334628/1‑229 (MQ=60)
                                                                                                           CCACTATCAGTCCAACGATTTCATCTGGTTCTTCAACATCCTCTAGCTCTACATACGATATCGAATCATCTCAAAGTATCGAATCGTCAGGTACATCTTCCGCTACAGCCGAACCATCTGCGTCTTCCGGTTTTCCTTTGACCCCTCGCTCTGCTTTTGTTTCACCTATTGCACATTTCTCTACTCAACTCTCTTCATCTTCTTCTTCTGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑AA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CATCACCCTCATCATCCTAAACCTCATCCTCATCCTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CTCCACATCAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CATCACCTGCCACTCTTTCCTAAACTTCTTCTTCTTCTTC                                                                                                                                                                                   >  SRR13385772.722153/1‑301 (MQ=60)
                                                                                                                  CAGTCCAACGATTTCATCTGGTTCTTCAACATCCTCTAGCTCTACATACGATATCGAATCATCTCAAAGTATCGAATCGTCAGGTACATCTTCCGCTACAGCCGAACCATCTGCGTCTTCAGGATTTCGTTTGACTTCTAGTTCTGCTTTTGTATCATATATTGCAACTTTCTCTTCTCAACTTTCTTCATCTTCATCTTATGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑AA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TCATCCTCATCATT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ATCAACATCAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CATCATCattctcaacatcatcatcatctgcccctctagataggaagagcacacgactgaactccaa                                                                                                                                                        >  SRR13385772.217958/1‑240 (MQ=60)
                                                                                                                            ATTTCATCTGGTTCTTCAACATCCTCTAGCTCTACATACGATATCGAATCATCTCAAAGTATCGAATCGTCAGGTACATCTTCCGCTACAGCCGAACCATCTGCGTCTTCAGGTTTTCGTTTGACTTCTAGTTCTGCTTTTGTTTCATCTATTGCACCTTTCTCTTCTCAACTTTCTTCATCTTCATCTTCTGAAACATCATCCTCATCATTCTCAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TCATCCTCATCATT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CTCAACATCAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CATCATCTGCCCCTCTTTCCTTAACTTCTTCTTCTTCTTCTTtcg                                                                                                                                                                              <  SRR13385772.476034/289‑4 (MQ=60)
                                                                                                                                   CTGGTTCTTCAACATCCTCTAGCTCTACATACGATATCGAATCATCTCAAAGTATCGAATCGTCAGGTACATCTTCCGCTACAGCCGAACCATCTGCGTCTTCAGGTTTTCGTTTGACTTCTAGTTCTGCTTTTGTTTCATCTATTGCACCTTTCTCTTCTCAACTTT                                                                                                                                                                                                                                                                                                                                                                                    <  SRR13385772.656808/168‑1 (MQ=60)
                                                                                                                                                         CTCTGCATACGATATCGAATCATCTCAAAGTATCGAATCGTCAGGTACATCTTCCGCTACAGCCGAACCATCTGCGTCTTCAGGTTTTCGTTTGACTTCTAGTTCTGCTTTTGTTTCATCTATTGCACCTTTCTCTTCTCAACTTTCTTCATCTTCATCTTCTGAAACATCATCCTCATCATTCTCAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TCATCCTCATCATT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CTCAACATCAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CATCATCTGCCCCTCTTTCCTTAA‑‑‑‑‑‑‑‑‑CTTCTTCTTCTTCTTCTTTCGCCACTATTATTACCTTGGAACCATCGAGCTCAAAAAGCGG                                                                                                                             >  SRR13385772.347633/1‑300 (MQ=60)
                                                                                                                                                              CATACGATATCGAATCATCTCAAAGTATCGAATCGTCAGGTACATCTTCCGCTACAGCCGAACCATCTGCGTCTTCAGGTTTTCGTTTGACTTCTAGTTCTGCTTTTGTTTCATCTATTGCACCTTTCTCTTCTCAACTTTCTTCATCTTCATCTTCTGAAACATCCTCCTCATCATTCTCAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TCATCCTCCTCATT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CTCAACATCAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CATCATCTGCCCCTCTTTCCTTAA‑‑‑‑‑‑‑‑‑CTTCTTCTTCTTCTTCTTTCGCCACTCTTATTACCTTGGAACCATCGAGCTCAAAAAGCGGACACTC                                                                                                                       >  SRR13385772.52820/1‑301 (MQ=60)
                                                                                                                                                                               TCTCAAAGTATCGAATCGTCAGGTACATCTTCCGCTACAGCCGAACCATCTGCGTCTTCAGGTTTTCGTTTGACTTCTAGTTCTGCTTTTGTTTCATCTATTGCACCTTTCTCTTCTCAACTTTCTTCATCTTCATCTTCTGAAACATCATCCTCATCATTCTCAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TCATCCTCATCATT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CTCAACATCAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CATCATCTGCCCCTCTTTCCTTAA‑‑‑‑‑‑‑‑‑CTTCTTCTTCTTCTTCTTTCGCCACTATTATTACCTTGGAACCATCGAGCTCACAAAGCGGAAACTCTCAACTAACTTTGGCGC                                                                                                      >  SRR13385772.82652/1‑301 (MQ=60)
                                                                                                                                                                                  CAAAGTATCGAATCGTCAGGTACATCTTACGCTACAGCCGAACCGTCTGCGTCTTCAGGTTTTCGTTTGACTTCTAGTTCTGCTTTTGTTTCATCTATTGCAACTTTCTCTTCTCAACTTTCTTCATCTTCATCTTCTGAAACATCATCCTCATCATTCTCAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TCATCCTCATCATT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CTCAACATCAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CATCATCTGCCCCTCTTTCCTTAA‑‑‑‑‑‑‑‑‑CTTCTTCTTCTTCTTCTTTCGCCACTATTATTACCTTGGAACCATCGAGCTCAAAAAGCGGAAACTCTCAACTAACTTTGGCGT                                                                                                      <  SRR13385772.114297/298‑1 (MQ=60)
                                                                                                                                                                                          CGAATCGTCAGGTACATCTTCCGCTACAGCCGAACCATCTGCGTCTTCAGGTTTTCGTTTGACTTCTAGTTCTGCTTTTGTTTCATCTATTGCACCTTTCTCTTCTCAACTTTCTTCATCTTCATCTTCTGAAACATCATCCTCATCATTCTCAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TCATCCTCATCATT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CTCAACATCAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CATCATCTGCCCCTCTTTCCTTAA‑‑‑‑‑‑‑‑‑CTTCTTCTTCTTCTTCTTTCGCCACTATTATTACCTTGGAACCATCGAGCTCAAAAAGCGGAAACTCTCAACTAACTTTGGCGTCATCGTCTTC                                                                                            <  SRR13385772.607673/300‑1 (MQ=60)
                                                                                                                                                                                                GTCAGGTACATCTTCCGCTACAGCCGAACCATCTGCGTCTTCAGGTTTTCGTTTGACTTCTAGTTCTGCTTTTGTTTCATCTATTGCACCTTTCTCTTCTCAACTTTCTTCATCTTCATCTTCTGAAACATCATCCTCATCATTCTCAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TCATCCTCATCATT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CTCAACATCAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CATCATCTGCCCCTCTTTCCTTAA‑‑‑‑‑‑‑‑‑CTTCTTCTTCTTCTTCTTTCGCCACTATTATTACCTTGGAACCATCGAGCTCAAAAAGCGGAAACTCTCAACTAACTTTGGCGTCATCGTCTTCCACTTCC                                                                                     >  SRR13385772.723821/1‑301 (MQ=60)
                                                                                                                                                                                                             TCCGCTACAGCCGAACCATCTGCGTCTTCAGGTTTTCGTTTGACTTCTAGTTCTGCTTTTGTTTCATCTATTGCACCTTTCTCTTCTCAACTTTCTTCATCTTCATCTTCTGAAACATCATCCTCATCATTCTCAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TCATCCTCATCATT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CTCAACATCAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CATCATCTGCCCCTCTTTCCTTAA‑‑‑‑‑‑‑‑‑CTTCTTCTTCTTCTTCTTTCGCCACTATTATTACCTTGGAACCATCGAGCTCAAAAAGCGGAAACTCTCAACTAACTTTGGCGTCATCGTCTTCCACTTCCGCAGTTGAGTCA                                                                         <  SRR13385772.1099799/300‑1 (MQ=60)
                                                                                                                                                                                                                GCTACAGCCGAACCATCTGCGTCTTCAGGTTTTCGTTTGACTTCTAGTTCTGCTTTTGTTTCATCTATTGCACCTTTCTCTTCTCAACTTTCTTCATCTTCATCTTCTGAAACATCATCCTCATCATTCTCAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TCATCCTCATCATT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CTCAACATCAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CATCATCTGCCCCTCTTTCCTTAA‑‑‑‑‑‑‑‑‑CTTCTTCTTCTTCTTCTTTCGCCACTATTATTACCTTGGAACCATCGAGCTCAAAAAGCGGAAACTCTCAACTAACTTTGGCGTCATCGTCTTCCACTTCCGCAGTTGCGTCATCCC                                                                     >  SRR13385772.462272/1‑301 (MQ=60)
                                                                                                                                                                                                                    CAGCCGAACCATCTGCGTCTTCAGGTTTTCGTTTGACTTCTAGTTCTGCTTTTGTTTCATCTATTGCACCTTTCTCTTCTCAACTTTCTTCATCTTCATCTTCTGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑AA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TCATCCTCATCATT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CTCAACATCAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CCTCATCattctcaacatc                                                                                                                                                                                                        <  SRR13385772.133099/154‑13 (MQ=60)
                                                                                                                                                                                                                                                  GTTTGACTTCTAGTTCTGCTTTTGTTTCATCTATTGCACCTTTCTCTTCTCAACTTTCTTCATCTTCGTCTGCTGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑AA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TCAGCCTCATCATTCTCAACATCAGCCTCATCATGCTCAACATCAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CATCATCTGCCCCTCTTTCCGTAA‑‑‑‑‑‑‑‑‑CTTCTTCTTCGTCTTCTTTCGCCACTATTATTACCTTGGAACCATCGAGCTCAAAAAGCGGAAACTCTCAACTAACTTTGGCGTCATCGTCTTCCACTTCCGCAGTTGAGTCATCCCAAACAGGGTCCACTATAGCAAGAACTACCTCTAC                                   <  SRR13385772.718288/301‑1 (MQ=60)
                                                                                                                                                                                                                                                            TAGTTCTGCTTTTGTTTCATCTATTGCACCTTTCTCTTCTCAACTTTCTTCATCTTCATCTTCTGAAACATCATCCTCATCATTCTCAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TCATCCTCATCATT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CTCAACATCAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CATCATCTGCCCCTCTTTCCTTAA‑‑‑‑‑‑‑‑‑CTTCTTCTTCTTCTTCTTTCGCCACTATTATTACCTTGGAACCATCGAGCTCAAAAAGCGGAAACTCTCAACTAACTTTGGCGTCATCGTCTTCCACTTCCGCAGTTGAGTCATCCCAAACAGGGTCCACTATAGCAAGAACTACATCTACACTGGTACCC                         >  SRR13385772.893274/1‑301 (MQ=60)
                                                                                                                                                                                                                                                              GTTCTGCTTTTGTTTCATCTATTGCACCTTTCTCTTCTCAACTTTCTTCATCGTCATCTTCTGAAACATCATCCTCATCATTCTCAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TCATCCTCATCATT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CTCAACATCAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CATCATCTGCCCCTCTTTCCTTAA‑‑‑‑‑‑‑‑‑CTTCTTCTTCTTCTTCTTTCGCCACGATTATTACCTTGGAACCATCGAGCTCAAAAAGCGGAAACTCTCAACTAACTGTGGCGTCATCGTCTTCCACTTCCGCAGTTGAGTCATCCCAAACAGGGTCCACTATAGCAAGAACTACCTCTACACTGGTACCCTC                       <  SRR13385772.1300731/301‑1 (MQ=60)
                                                                                                                                                                                                                                                                    CTTTTGTTTCATCTATTGCACCTTTCTCTTCTCAACTGTCTTCATCTTCATCTTCTGAAACATCATCCTCATCATTCTCAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TCATCCTCATCATT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CTCAACATCAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CATCATCTGCCCCTCTTTCCTTAA‑‑‑‑‑‑‑‑‑CTTCTTCTTCTTCTTCTTTCGCCGCTATTATTACCTTGGAACCATCGAGCTCAAAAAGCGGAAACTCTCAACTAACTTTGGCGTCATCGTCTTCCACTTCCGCAGTTGAGTCA                                                                         <  SRR13385772.565776/245‑1 (MQ=60)
                                                                                                                                                                                                                                                                             CATCGATTGCACCTTTCTCTTCTCAACTTTCTTCATCTTCATCTTCTGAAACATCATCCTCATCATTCTCAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TCATCCTCATCATT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CTCAACATCAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CATCATCTGCCCCTCTTTCCTT‑‑‑‑‑‑‑‑‑TACGTCTTCTTCTTCTTCGTTCGCCACTATGATTACCTTGGGACCATCGAGCTCAAAAAGCGGAAACTCTCAACTAACTTTGGCGTCATCTTCTTCCACTTCCGCAGTTGGGTCATCCCAAACAGGGTCCACTATAGCAAGAACTACCTCTACACTGGTACCCTCTTCTAGCGTAGATA         <  SRR13385772.1280921/300‑1 (MQ=60)
                                                                                                                                                                                                                                                                                  ATTGCACCTTTCTCTTCTCAGCTGTCTTCATCTTCATCTTCTGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑AACATCATCCTCATCATTCTCAGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TCATCCTCATCATT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CTCAACATCAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CATCATCTGCCCCTCTGGCCTGA‑‑‑‑‑‑‑‑‑GCTTCTTCTTCTTCTTCTTTCGCCACTATTATTACCGTGGAACCATCGAGCTCAAAAAGCGGAAACTCGCGACTAACTTTGGCGTCATCGTCTTCGACGTCCGCAGTTGAGTCATCCCAAACAGGGTCCACTATAGCAAGAACTACCTCTACACTGGTACCCTCGTCTAGCGTAGATACAACG    <  SRR13385772.874362/300‑1 (MQ=60)
                                                                                                                                                                                                                                                                                    TGCACCTTTCTCTTCTCAACTTTCTTCATCTTCATCTTCTGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑AA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TCATCCGCATCATT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CTCAACATCATCCTCATCATTCTTAACATCAGCATCATCTGCCCCTCTTTCCTTAA‑‑‑‑‑‑‑‑‑CTTCTTCTTCTGCTTCTTTCGCCACTATTATTACCTTGGAACCATCGAGCGCAAAAAGCGGAAACTCTCAACTAACTTTGGCGTCATCGTCTTCCACTTCCGCAGTTGAGTCATCCCAAACAGGGTCCACTATAGCAAGAACTACCTCTACACTGGTACCCTCTTCTAGCGTAGATACAACGTC  <  SRR13385772.227419/300‑1 (MQ=60)
                                                                                                                                                                                                                                                                                                   |                                                                                                                                                                                                                                                                                                                                                                                         
CGTCGTTTCTTCCACTACTGAAAAGATAACAGAGGTTTCAACGGTGTCAGCTTCAGAACAAGTTAGTGCTACTCAAACAAACTCATTGGTTTCTACTTCTACTGTTTCCACTATCAGTCCAACGATTTCATCTGGTTCTTCAACATCCTCTAGCTCTACATACGATATCGAATCATCTCAAAGTATCGAATCGTCAGGTACATCTTCCGCTACAGCCGAACCATCTGCGTCTTCAGGTTTTCGTTTGACTTCTAGTTCTGCTTTTGTTTCATCTACTGCACCTTTCTCTTCCCAACTTTCTTCATCTTCATCTTCTGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑AA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TCATCCTCATCATT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TTCAACATCAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CATCATCTGCCCCTCTTTCCTTAACTTCTTCTTCTTCTTCTTCTTCTTCTTTCGCCACTATTATTACCTTGGCACCATCGAGCTCAAAAAGCGGAAACTCTCAACTAACTTTGGCGTCATCGTCTTCCACTTCCGCAGTTGAGTCATCCCAAACAGGGTCCACTATAGCAAGAACTACCTCTACACTGGTACCCTCTTCTAGCGTAGATACAACGTC  >  BK006934/385725‑386288

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 10 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑