Notes

Publication: None

ALE, flask, and isolate counts

ALE replicate Flask count Isolate count
1 1 1
2 1 1
3 1 1
4 1 1
5 1 1
6 1 1
7 1 1
8 1 1
9 1 1
10 1 1
11 1 1
12 1 1
13 1 1
14 1 1
15 1 1
16 1 1
17 1 1
18 1 1
19 1 1
20 1 1
20 20 20

ALE experiment mutation counts

Mutation Type Unique Observed
Single Base Substitutions 1518 1644
Multiple Base Substitutions 1 1
Deletions 20 77
Insertions 6 63
Mobile Element Insertions 9 28
Amplifications 0 0
Gene Conversions 0 0
Inversions 0 0
Total 1554 1813

Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Unassigned Missing Coverage Evidence Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F48 I1 R1 56 0 123.4 4244010 99.1% 4205813 139.8
A2 F48 I1 R1 45 0 83.3 2696702 99.2% 2675128 139.7
A3 F48 I1 R1 70 0 151.6 5072932 98.7% 5006983 139.8
A4 F48 I1 R1 79 0 90.7 3162666 99.0% 3131039 139.8
A5 F48 I1 R1 55 0 131.7 4456318 99.2% 4420667 139.7
A6 F48 I1 R1 61 0 74.3 2613450 99.1% 2589928 139.8
A7 F48 I1 R1 508 0 125.6 4303852 99.2% 4269421 139.6
A8 F48 I1 R1 66 0 101.5 3442112 98.9% 3404248 139.8
A9 F48 I1 R1 82 0 50.4 1709896 99.0% 1692797 139.8
A10 F48 I1 R1 45 0 111.1 3780378 99.2% 3750134 139.8
A11 F48 I1 R1 62 0 93.4 3176452 99.2% 3151040 139.8
A12 F48 I1 R1 76 0 74.1 2532288 99.0% 2506965 139.8
A13 F48 I1 R1 62 0 147.6 5031800 99.1% 4986513 139.7
A14 F48 I1 R1 75 0 141.5 4784044 99.1% 4740987 139.8
A15 F48 I1 R1 115 0 87.5 3003888 99.1% 2976853 139.7
A16 F48 I1 R1 61 0 131.2 4447032 99.1% 4407008 139.7
A17 F48 I1 R1 90 0 35.3 1199032 98.5% 1181046 139.9
A18 F48 I1 R1 70 0 76.3 2572620 98.7% 2539175 139.9
A19 F48 I1 R1 83 0 81.6 2760494 99.1% 2735649 139.9
A20 F48 I1 R1 52 0 61.9 2103308 98.8% 2078068 139.9

Mutation Needle Plot

Mutation Targets

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