Notes

Publication: None

ALE, flask, and isolate counts

ALE replicate Flask count Isolate count
0 1 1
9 1 3
10 1 3
11 1 3
12 1 3
5 5 13

ALE experiment mutation counts

Mutation Type Unique Observed
Single Base Substitutions 19 67
Multiple Base Substitutions 0 0
Deletions 16 89
Insertions 6 29
Mobile Element Insertions 7 42
Amplifications 0 0
Gene Conversions 0 0
Inversions 0 0
Total 48 227

Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Unassigned Missing Coverage Evidence Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A0 F0 I1 R1 12 0 55.8 1065165 96.0% 1022558 253.4
A9 F131 I0 R1 39 0 102.5 1763998 97.7% 1723426 265.0
A9 F131 I1 R1 17 0 61.0 2199030 90.6% 1992321 142.9
A9 F131 I2 R1 18 0 43.6 1574262 90.5% 1424707 142.7
A10 F135 I0 R1 34 0 77.4 1390606 97.6% 1357231 267.4
A10 F135 I1 R1 16 0 64.6 2410154 90.8% 2188419 142.6
A10 F135 I2 R1 16 0 50.8 1916504 90.0% 1724853 141.5
A11 F138 I0 R1 34 0 66.3 1182276 98.0% 1158630 256.8
A11 F138 I1 R1 18 0 39.5 1437398 90.0% 1293658 142.5
A11 F138 I2 R1 16 0 45.1 1613674 91.3% 1473284 142.7
A12 F142 I0 R1 56 0 78.8 1442294 97.4% 1404794 263.9
A12 F142 I1 R1 19 0 56.9 2131346 90.8% 1935262 142.0
A12 F142 I2 R1 18 0 74.0 2733720 90.7% 2479484 142.8

Mutation Needle Plot

Mutation Targets

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