Notes

Publication: None

ALE, flask, and isolate counts

ALE replicate Flask count Isolate count
0 1 1
1 3 3
2 2 2
3 3 3
4 2 2
5 2 2
6 13 13

ALE experiment mutation counts

Mutation Type Unique Observed
Single Base Substitutions 18 56
Multiple Base Substitutions 0 0
Deletions 7 58
Insertions 2 26
Mobile Element Insertions 7 27
Amplifications 0 0
Gene Conversions 0 0
Inversions 0 0
Total 34 167

Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Unassigned Missing Coverage Evidence Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A0 F0 I1 R1 10 0 92.1 3307530 90.7% 2999929 143.1
A1 F13 I1 R1 11 0 35.9 1540346 95.1% 1464869 120.8
A1 F28 I1 R1 13 0 34.7 1359410 92.7% 1260173 128.8
A1 F64 I1 R1 13 0 171.6 6011574 97.4% 5855273 137.3
A2 F12 I1 R1 14 0 37.1 1473030 96.0% 1414108 122.5
A2 F71 I1 R1 15 0 96.4 3441492 97.1% 3341688 135.5
A3 F12 I1 R1 12 0 28.4 1141862 92.9% 1060789 130.8
A3 F31 I1 R1 14 0 39.2 1468162 95.9% 1407967 130.5
A3 F70 I1 R1 15 0 89.9 3216594 97.4% 3132962 134.5
A4 F17 I1 R1 12 0 35.9 1482066 95.7% 1418337 120.9
A4 F38 I1 R1 12 0 80.1 3163848 96.1% 3040457 139.0
A5 F22 I1 R1 13 0 33.1 1444658 95.8% 1383982 128.4
A5 F43 I1 R1 13 0 94.0 3334360 97.6% 3254335 138.9

Mutation Needle Plot

Mutation Targets

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