Notes

Publication: None

ALE, flask, and isolate counts

ALE replicate Flask count Isolate count
0 1 1
1 2 2
2 2 2
3 2 2
4 2 2
5 2 2
6 11 11

ALE experiment mutation counts

Mutation Type Unique Observed
Single Base Substitutions 17 39
Multiple Base Substitutions 0 0
Deletions 1 1
Insertions 1 10
Mobile Element Insertions 0 0
Amplifications 0 0
Gene Conversions 0 0
Inversions 0 0
Total 19 50

Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Unassigned Missing Coverage Evidence Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A0 F0 I1 R1 4 0 184.5 5371680 98.0% 5264246 97.0
A1 F5 I0 R1 10 0 242.6 6724448 98.7% 6637030 98.0
A1 F10 I0 R1 11 0 111.3 3160564 99.0% 3128958 97.0
A2 F5 I0 R1 12 0 154.8 4388392 98.3% 4313789 97.0
A2 F10 I0 R1 8 0 26.6 769492 98.7% 759488 97.0
A3 F5 I0 R1 13 0 253.6 7386608 98.9% 7305355 97.0
A3 F10 I0 R1 1 0 0.0 16372 97.1% 15897 98.0
A4 F5 I0 R1 11 0 170.0 4876272 98.8% 4817756 97.0
A4 F10 I0 R1 12 0 262.6 7293948 98.9% 7213714 98.0
A5 F5 I0 R1 16 0 326.2 9315494 99.1% 9231654 97.0
A5 F10 I0 R1 7 0 176.8 5220540 98.0% 5116129 98.0

Mutation Needle Plot

Mutation Targets

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