Notes

Publication: None

ALE, flask, and isolate counts

ALE replicate Flask count Isolate count
0 1 2
7 4 7
9 4 8
3 9 17

ALE experiment mutation counts

Mutation Type Unique Observed
Single Base Substitutions 43 189
Multiple Base Substitutions 0 0
Deletions 9 24
Insertions 3 9
Mobile Element Insertions 0 0
Amplifications 0 0
Gene Conversions 0 0
Inversions 0 0
Total 55 222

Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Unassigned Missing Coverage Evidence Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A0 F0 I0 R1 371 0 111.4 4154515 97.0% 4029879 91.0
A0 F0 I1 R1 23 0 102.6 3713763 97.1% 3606063 91.0
A7 F21 I0 R1 24 0 15.0 303320 99.4% 301500 149.0
A7 F21 I1 R1 23 0 30.1 636627 98.7% 628350 148.0
A7 F67 I0 R1 28 0 38.2 815207 98.6% 803794 141.0
A7 F67 I1 R1 28 0 23.6 502806 98.6% 495766 141.0
A7 F123 I0 R1 30 0 27.0 575273 98.7% 567794 141.0
A7 F184 I0 R1 35 0 35.7 768239 98.7% 758251 140.0
A7 F184 I1 R1 32 0 17.0 340811 99.5% 339106 149.0
A9 F22 I0 R1 51 0 50.2 1124154 95.0% 1067946 141.0
A9 F22 I1 R1 23 0 58.7 1263205 98.8% 1248046 148.0
A9 F59 I0 R1 23 0 22.0 466439 98.6% 459908 141.0
A9 F59 I1 R1 29 0 14.4 307489 99.5% 305951 148.0
A9 F110 I0 R1 28 0 36.3 769303 98.8% 760071 141.0
A9 F110 I1 R1 27 0 18.3 392680 99.5% 390716 141.0
A9 F174 I0 R1 34 0 41.4 875437 98.7% 864056 141.0
A9 F174 I1 R1 26 0 63.3 1412239 95.2% 1344451 141.0

Mutation Needle Plot

Mutation Targets

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