Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
JC JC	NC_000913	1,979,486	IS5 (+) +4 bp	100%	intergenic (‑271/‑264)	insA5 ← / → uspC	IS1 family protein InsA/universal stress protein C

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	1979486 =	0 (0.000)	33 (1.700)	21/384	NT	100%	intergenic (‑271/‑267)	insA5/uspC	IS1 family protein InsA/universal stress protein C
	?	NC_000913	2101749 =	NA (NA)					noncoding (1195/1195 nt)	IS5	repeat region
*	?	NC_000913	= 1979489	0 (0.000)	17 (0.870)	13/384	NT	100%	intergenic (‑274/‑264)	insA5/uspC	IS1 family protein InsA/universal stress protein C
	?	NC_000913	= 2290113	NA (NA)					noncoding (1/1195 nt)	IS5	repeat region

TTCCTTATTCTGTGAACTTCAGGTGACATTAAAGCTTTACTCCTAATGGAGAAACGACGCAATCCCAACTCGGTCAAACAGGTAAATATTAGTCTGATTATTAGTAAAGATAATTAATCAATCACTCCCGGTGATCATATAATTTCAAATGTAATTATAAGAAAATAGTGTACTGATTCTCCGCATTAAACAAGTGGTTAA‑TATATGTAAAACATTTCATTAACATTAAGTTGATTGTTGCCTTTCTTTGTATTTAATTAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913/1979746‑1979486 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTTTAGTGAGATCTCTCCCACTGACGTATCATTTGGTCCGCCCGAAACAGGTTGGCCAGCGTGAATAACATCGCCAGTTGGTTATCGTTTTTCAGCAACCCCTTGTATCTGGCTTTCACGAAGCCGAAC  >  NC_000913/2101749‑2102021                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         TTNCTTATTCTGTGAACTTCAGGNGCCATTAAAGCTTTACTCCTAATGGAGAAACGACGCAATCCCAACTTGGTCAAACAGGTAAATATTAGTCTGATTATTAGTAAAGATAATTAATCAATCACTCCCGGTGATCATATAATTTCAAATGTTATTATAAGAAAATAGTGTACTGATTCTCCGCATTAAACAAGTGGTTAA‑TATATGTAACACATTTAATTAACCTTAAGTTTATTGTTGCCTTTTTTTTTTTTTTATTTGGGGAGGgttggata                                                                                                                                                                                                                                                                     >  2:408321/1‑267                               AAAGCTTTACTCCTAATGGAGAAACGACGCAATCCCAACTCGGTCAAACAGGTAAATATTAGTCTGATTATTAGTAAAGATAATTAATCAATCACTCCCGGTGATCATATAATTTCAAATGTAATTATAAGCAAATAGTGTACTGATTCTCCGCATTAAACAAGTGGTTAA‑TATATGTAAAACATTTCATTAACATTAAGTTGATTGTTGCCTTTCTTTGTATTTAATTAGGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGT                                                                                                                                                                                                                                       <  1:394127/275‑1                                      TACTCCTAATGGAGAAACGACGCAATCCCAACTCGGTCAAACAGGTAAATATTAGTCTGATTATTAGTAAAGATAATTAATCAATCACTCCCGGTGCTCATATAATTTCAACTGTAATTATAAGCAAATCGTGTACTGATTCTCCGCATTAACCAAGTGGTTAA‑TATATGTAAAACATTTCATTAACATTAAGTTGATTGTTGCCTTTCTTAGTATTTAATTAGGGAAGGTGCGAATAAGCGGGGCAATTCTTAACGGCTGACTCAGTCATTTat                                                                                                                                                                                                                                >  1:192120/1‑273                                                                         GTCAAACAGGTAAATATTAGTCTGATTATTAGTAAANATAATTAATCAATCACTCCCGGTGATCATATAATTTCAAATGTAATTATAAGAAAATAGTGTACTGATTCTCCGCATTAAACAAGTGGTTAA‑TATATGTAAAACATTTCATTAACATTAAGTTGATTGTTGCCTTTCTTTGTATTTAATTAGGGAAGGTGCGAATAAGCGGGGAAGTTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGTGCCGATTTTTTCTCCCGTA                                                                                                                                                                                              >  1:162751/1‑274                                                                         GTCAAACAGGTAAATATTAGTCTGATTATTAGTAAAGATAATTAATCAATCACTCCCGGTGATCATATAATTTCAAATGTAATTATAAGAAAATAGTGTACTGATTCTCCGCATTAAACAAGTGGTTAA‑TATATGTAAAACATTTCATTAACATTAAGTTGATTGTTGCCTTTCTTTGTATTTAATTAGTGAAGGTGCGCATAAGCGGG                                                                                                                                                                                                                                                               >  1:303001/1‑209                                                                         GTCAAACAGGTAAATATTAGTCTGATTATTAGTAAAGATAATTAATCAATCACTCCCGGTGATCATATAATTTCAAATGTAATTATAAGAAAATAGTGTACTGATTCTCCGCATTAAACAAGTGGTTAA‑TATATGTAAAACATTTCATTAACATTAAGTTGATTGTTGCCTTTCTTTGTATTTAATTAGGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTA                                                                                                                                                                                              >  2:71836/1‑274                                                                         GTCAAACAGGTAAATATTAGTCTGAGTATTAGTAAAGATAATTAATCAATCACTCCCGGTGACCATATAATTTCAAATGTAATTATACGAAAATAGTGTACTGATCCGCCGCATTAAACAAGTGGTTGA‑TATATGTAAAACATTTCATTAACATTAAGTTGATTGTTGCCTTTCTTTGTATTTAATTAGG                                                                                                                                                                                                                                                                                  >  1:68428/1‑190                                                                             AACAGGTAAATATTAGTCTGATTATTAGTAAAGATAATTAATCAATCACTCCCGGTGATCATATAATTTCAAATGTAATTATAAGAAAATAGTGTACTGATTCTCCGCATTAAACAAGTGGTTAA‑TATATGTAAAACATTTCATTAACATTAAGTTGATTGTTGCCTTTCTTTGTATTTAATTAGGGAAGGTGCGAATAAGCGGGGAAA                                                                                                                                                                                                                                                           <  2:303000/209‑1                                                                                        ATTAGTCTGATTATTATTAAAGATAATTAATCAATCACTCCCGGTGATCATATAATTTCAAATGTAATTATAAGAAAATAGTGTACTGATTCTCCGCATTAAACAAGTGGTTAA‑TAGATGTAAAACATTTCATTAACATTGAGTTGATTGTTGCCTTTCTTTGTATTTAATTAGGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGC                                                                                                                                                                              <  1:132693/275‑1                                                                                         TTAGGCTGATTATTAGTAGAGATAATTAATCAATCACTCCCGGTGATCATATAATTGCAAAGGTTATTAGAAGAAAATAGTGTACTGATTCTCCGCATTAAACAAGTGGTTAA‑TATATGTAAAACATTTCATTAACATTAAGTTGATTGTTGCCTTTCGTTGTATTTAATTAGGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCC                                                                                                                                                                             <  1:408322/275‑1                                                                                            GTCTGATTATTAGTAAAGATAATTAATCAATCACTCCCGGTGATCATATAATTTCAAATGTAATTATAAGAAAATAGTGTACTGATTCTCCGCATTAAACAAGTGGTTAA‑TATATGTAAAACATTTCATTAACATTAAGTTGATTGTTGCCTTTCTTTGTATTTAATTAGGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACT                                                                                                                                                                                                                                           >  2:323581/1‑210                                                                                            GTCTGATTATTAGTAAAGATAATTAATCAATCACTCCCGGTGATCATATAATTTCAAATGTAATTATAAGAAAATAGTGTACTGATTCTCCGCATTAAACAAGTGGTTAA‑TATATGTAAAACATTTCATTAACATTAAGTTGATTGTTGCCTTTCTTTGTATTTAATTAGGGAAGGTGCGAATAAGCGGG                                                                                                                                                                                                                                                               >  2:99629/1‑190                                                                                                GATTATTAGTAAAGATAATTAATCAATCACTCCCGGTGATCATATAATTTCAAATGTAATTATAAGAAAATAGTGTACTTATTCTCCGCATTAAACAAGTGGTTAA‑TATATGTAAAACATTTCATTAACATTAAGTTGATTGTTGCCTTTCTTTGTATTTAATTAGGGAAGGTGCGAATAAGCGGGGAAA                                                                                                                                                                                                                                                           <  1:99629/190‑1                                                                                                GATTATTAGTAAAGATAATTAATCAATCACTCCCGGTGATCATATAATTTCAAATGTAATTATAAGAAAATAGTGTACTGATTCTCCGCATTAAACAAGTGGTTAA‑TATATGTAAAACATTTCATTAACATTAAGTTGATTGTTGCCTTTCTTTGTATTTAATTAGGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGT                                                                                                                                                                                                                                       <  1:323582/210‑1                                                                                                 ATTATTAGTAAAGATAATTAATCAATCACTCCCGGTGATCATATAATTTCAAATGTAATTATAAGACAATAGAGTACTGATTCTCCGCATTAAACAAGTGGTTAA‑TATATGTAAAACATTTCAATAACATTAAGTTGATTGTTGCCTTTCTGTGTATTTAATTCGGGAAGGCGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAGATGCTTTGAATCAGCCTATTTAGA                                                                                                                                                                     >  1:19935/1‑275                                                                                                                   TAATCAATCACTCCCGGTGATCATATAATTTCAAATGTAATTATAAGAAAATAGTGTACTGATTCTCCGCATTAAACAAGTGGTTAA‑TATATGTAAAACATTTCATTAACATTAAGTTGATTGTTGCCTTTCTTTGTATTTAATTAGGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCATTTA                                                                                                                                                   <  1:71836/275‑1                                                                                                                   TAATCAATCACGCCCGGTGTTAATATAATTTAAAATGTAATTATAAGAAAATAGTGTACTGATTCTCCGCATTAAACAAGTGGTTAA‑TATATGTAAAACATTTCATTAACATTAAGTTGATTGTTGCCTTTCTTTGTATTTAATTAGGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCATTTA                                                                                                                                                   <  2:162750/275‑1                                                                                                                        AATCACTCCCGGTGATCATATAATTTCAAATGTAATTATAAGAAAATAGTGTACTGATTCTCCGCATTAACCAAGTGGTTAA‑TATATGTAAAACATTTCCTTAACATTAAGTTGATTGTTGCCTTTCTTTGTATTTAATTAGGGAAGGTGCGAATCAGCGGGGAAATTCTTCTCGACTGCCTCAGTCATTT                                                                                                                                                                                                                                  >  2:14654/1‑191                                                                                                                            ACTCCCGGTGATCATATAATTTCAAATGTAATTATAAGAAAAGCGTGTACCGATTCTACGCATTAAACAAGTGGTTAA‑TATATGTAAAACATTTCATTAACATTAAGTTGATTGTTGCCGTTCTTTGTATTTAATTAGGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATT                                                                                                                                                                                                                              <  1:14654/191‑1                                                                                                                                                  CAAATGTAATTATAAGAAAATAGTGTACTGATTCTCCGAATTAAACAAGTGGTTAA‑TATATGTAAAACATTTCATTAACATTAAGTTGATTGTTGCCTTTCTTTGTATTTACTTAGGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCAATTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTGGGCATTTAATGCGTTATCCCCAGTTTTTTTTGAGATCTC                                                                                                                    >  1:12804/1‑275                                                                                                                                                                           TACTGATTCTCCGCATTAAACAAGTGGTTAA‑TATATGTAAAACATTTCATTAACATTAAGTTGATTGTTGCCTTTCTTTGTATTTAATTAGGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATCTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTACCCATTTAAGGCGTTATCCCCAGCTTTTAGTGAGATCTCTCCCACTGACGTACCATTTGGTCCG                                                                                           >  1:17120/1‑275                                                                                                                                                                                  ttctccaATTAAAAAAGTTTTTAATTTTTTGAAAAAAACTTCATTAACATTAAGTTGTTTTTTGCTTTTCTTTGTATTTAATTAGGGCAGGGGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCCTTTCTTCATGGTTGAGCCGGTTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCATTTAAGGCGTTAGCCCCAGTTTTTAGTGAGATCTCTCCCACTGACGTATCATTTGGTCCGCCCGAA                                                                                     <  2:17120/268‑1                                                                                                                                                                                   CTCCGCATTAAACAAGTGGTTAA‑TATATGTAAAACATTTCATTAACATTAAGTTGATTGTTGCCTTTCTTTGTATTTTATTAGGGAAGGTGCGAATAAGCGGGGGAATTCTTCTCGGCTGACTCAGGCATTTCAATTTTTCTTGTTTGAGCCGATTTTTTTTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCATTTAAGGCGTTTTCCCCAGGTTTTTGTGAGATCTCCCCCACTGACGTATCATTTGGTCCGCCCGAAAC                                                                                   >  1:298371/1‑275                                                                                                                                                                                    TCCGCATTAAACAAGTGGTTAA‑TATATGTAAAACAGTTCATTAACATGAAGTTGATTGTTGCCGTTCGTTGTATTTAATTAGGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGC                                                                                                                                                                              <  1:340678/183‑1                                                                                                                                                                                                  GTGGTTAA‑TATATGTAAAACATTTCATTAACATTAAGTTGATTGTTGCCTTTCTTTGTATTTAATTAGGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTTTCCCGTAAATGCCTTGAAT                                                                                                                                                                                  >  1:93583/1‑165                                                                                                                                                                                                      TTAA‑TATATGTAAAACATTTCATTAACATTAAGTTTATTGTTGCCTTTCTTTGTATTTAATTAGGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGC                                                                                                                                                                              <  2:93583/165‑1                                                                                                                                                                                                            agATGTAAAACATTTCATTAACATTAAGTTGTTTGTTGCCTTTCTTGGTATTTAATGAGGGAAGGTGCGAATAAGGGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCG                                                                                                                                                          <  1:143308/178‑1                                                                                                                                                                                                                GTACAACAAATCATTGACATTAAGTTGATTGTTGCCTTTCTTTGTATTTAATTTGGGAAGGTGCGAATATGCGGGGTAATTATTCTCGGCTGACTCAGTCATATCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAACTGCCTTGAATCAGCCTATTTAGACCGTTTCTTAGCCATTTAAGGCGTGATCCCCATTTTTTAG                                                                                                                             >  2:278187/1‑205                                                                                                                                                                                                                GTAAAACATTTCATTAACATTAAGTTGATTGTTGCCTTTCTTTGTATTTAATTAGGAAAGGTGCGAATAAGCGGGGAAATTTTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTTTCCCTTAACTGCATTGAAT                                                                                                                                                                                  >  1:177/1‑152                                                                                                                                                                                                                    AACATTTCATTAACATTAAGTTGATTGTTGCCTTTCTTTGTATTTAATTAGTGAAGGTGCGAATAAGCGGGTAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTTTAGTGAG                                                                                                                         <  1:278188/205‑1                                                                                                                                                                                                                    AACATTTCAGTAACATTAATGTGATTGTGGCCTTTCTTTGTATTTAATTAGGAAAGTTGCGAATAATCGGGAAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGC                                                                                                                                                                              <  2:177/152‑1                                                                                                                                                                                                                                           ATTGTTGCCTTTCTTTGTATTTAATTAGGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAAT                                                                                                                                                                                  >  2:284671/1‑125                                                                                                                                                                                                                                               TTGCCTTTCTTTGTATTTAATTAGGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGC                                                                                                                                                                              <  1:284672/125‑1                                                                                                                                                                                                                                                         TTGTATTTAATTAGGGAAGGTGCGAATAAGCGGGGAAATTCTTCGCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATGTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGAGCGTTGCTTCGCCATTTAAGGCGTTATCCCCAGTTTTTAGT                                                                                                                            <  1:48295/165‑1                                                                                                                                                                                                                                                               cagttttGGGAAGGTGCCAAAAGACGGTGAAATTCTTCTCCGCAGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTCTTTCTCCCGTAAATGCCTTGAATCAGTCTATTTAGACCGTTTCTTCGCCACTTAAGGCGTTATCCCCAGTTTTTAGTGAGATCTCTCCCACTGACGTATCATTTGTTCCTCCCGAAACAGGTTGCCCAACGTGAATAACATCGCCAGTTGGGTATCGTTTTGCAGCAACCCCTTGTATCTGGCTTTCACGAtg        <  2:118949/268‑3                                                                                                                                                                                                                                                                   TTAGGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTTTAGT                                                                                                                            <  2:289831/155‑1                                                                                                                                                                                                                                                                     AGGGTAGCTGCGAATAGGCGTGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTTTAGTGAGATCTCTCCCACTGACGT                                                                                                        <  2:289927/173‑1                                                                                                                                                                                                                                                                      GGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTGCCTTAAATGCCTTGAATCAGCCTCTTTAGACCTTTCCTACGCCATTTCAGGCTTTCTCCTTACTTTTTCCTGAGATCTCCCCCACTGCCGTATCATCTGGTC                                                                                             >  1:191851/1‑183                                                                                                                                                                                                                                                                      GGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGACTTTTTCTCCCGTAAATGCCTTGAATCAGCCGCCTTAGCCCGTTTCTTCGCCCATTAAGGCGTTATCCCCAGTTTTTAGTGCGATGTCTCCCACTGCAGTATCATTTGGTCCGCCCGAAACAGGTTGGCCAGCGTGAATAACATCGCCCGTTGGTTATCGGTTTTCAGCAACCCCTTGTATCTGGCTTTCACCCAGCCGAtc  >  1:96943/1‑272                                                                                                                                                                                                                                                                      GGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGT                                                                                                                                                                                                                                       <  1:10413/45‑1                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         TTCCTTATTCTGTGAACTTCAGGTGACATTAAAGCTTTACTCCTAATGGAGAAACGACGCAATCCCAACTCGGTCAAACAGGTAAATATTAGTCTGATTATTAGTAAAGATAATTAATCAATCACTCCCGGTGATCATATAATTTCAAATGTAATTATAAGAAAATAGTGTACTGATTCTCCGCATTAAACAAGTGGTTAA‑TATATGTAAAACATTTCATTAACATTAAGTTGATTGTTGCCTTTCTTTGTATTTAATTAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913/1979746‑1979486 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGTTTTTAGTGAGATCTCTCCCACTGACGTATCATTTGGTCCGCCCGAAACAGGTTGGCCAGCGTGAATAACATCGCCAGTTGGTTATCGTTTTTCAGCAACCCCTTGTATCTGGCTTTCACGAAGCCGAAC  >  NC_000913/2101749‑2102021

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 10 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.