New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? AC_000091 = 4056987NA (NA)125 (0.930) 88/178 0.3 89.3% coding (388/414 nt) yrhA hypothetical protein
?AC_000091 = 4370795 15 (0.110)coding (471/1116 nt) dcuA C4‑dicarboxylate antiporter

Only 100 of 125 total aligned reads displayed.

AGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  AC_000091/4056902‑4056987
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CAAATCCGGTGCAAAAACGTCCGTCTGGCTGTTCCTGCTGGGCGTAGTTGGCGTGGTTATCTATGCAATCATCAACAGCCCAAGCATGG  <  AC_000091/4370795‑4370707
                                                                                                                                                                               
AGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAAA                                                                                       >  1:282894/1‑90
 GGAGGGACAGCTGATAGAAACAGAAGCCACTTGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAAAT                                                                                      <  2:145433/90‑1
  GAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAAATC                                                                                     <  1:3338384/90‑1
   AGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAAATCC                                                                                    >  2:2362774/1‑90
       ACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAAATCCGGTG                                                                                >  1:904797/1‑90
       ACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAAATCCGGTG                                                                                >  2:128193/1‑90
          GCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAAATCCGGTGCAA                                                                             >  1:1514564/1‑90
          GCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAAATCCGGTGCAA                                                                             <  1:2135009/90‑1
          GCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAAATCCGGTGCAA                                                                             <  2:3026814/90‑1
           CTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAAATCCGGTGCAAA                                                                            >  1:454244/1‑90
            TGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAAATCCGGTGCAAAA                                                                           >  1:1712837/1‑90
             GATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAAATCCGGTGCAAAAA                                                                          >  2:2001843/1‑90
              ATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAAATCCGGTGCAAAAAC                                                                         <  2:2023400/90‑1
               TAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAAATCCGGTGCAAAAACG                                                                        <  1:1055020/90‑1
               TAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAAATCCGGTGCAAAAACG                                                                        <  2:2194178/90‑1
               TAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAAATCCGGTGCAAAAACG                                                                        <  2:2834360/90‑1
               TAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAAATCCGGTGCAAAAACG                                                                        <  1:1255083/90‑1
                AGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAAATCCGGTGCAAAAACGT                                                                       >  2:3183571/1‑90
                 GAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAAATCCGGTGCAAAAACGcc                                                                      >  2:1913611/1‑88
                  AAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAACTCAGTAAGTTGGCAGCATCACCCAAATCCGGTGCAAAAACGTCC                                                                     <  1:2192663/90‑1
                  AAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAAATCCGGTGCAAAAACGTCC                                                                     <  1:1714985/90‑1
                    ACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAAATCCGGTGCAAAAACGTCCGT                                                                   >  2:3392854/1‑90
                     aaaAAGCCACTGGAGCAACTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAAATCCGGTGCAAAAACGTCCGTC                                                                  <  2:3221651/87‑1
                     CAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACACAAATCCGGTGCAAAAACGTCCGTC                                                                  >  1:2017509/1‑90
                      AGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAAATCCGGTGCAAAAACGTCCGTCT                                                                 >  1:3267055/1‑90
                      AGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAAATCCGGTGCAAAAACGTCCGTCT                                                                 <  2:1293741/90‑1
                       GAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAAATCCGGTGCAAAAACGTCCGTCTG                                                                <  2:3013167/90‑1
                         AGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAAATCCGGTGCAAAAACGTCCGTCTGGC                                                              >  2:2004610/1‑90
                          GCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAAATCCGGTGCAAAAACGTCCGTCTGGCT                                                             <  2:2547587/90‑1
                          GCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAAATCCGGTGCAAAAACGTCCGTCTGGCT                                                             <  2:519702/90‑1
                          GCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAAATCCGGTGCAAAAACGTCCGTCTGGCT                                                             <  1:1527654/90‑1
                          GCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAAATCCGGTGCAAAAACGTCCGTCTGGCT                                                             <  1:1663823/90‑1
                           CCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAAATCCGGTGCAAAAACGTCCGTCTGGCTG                                                            <  2:1599627/90‑1
                            CACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAAATCCGGTGCAAAAACGTCCGTCTGGCTGT                                                           >  2:1543110/1‑90
                               TGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAAATCCGGTGCAAAAACGTCCGTCTGGCTGTTCC                                                        >  2:809243/1‑90
                               TGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAAATCCGGTGCAAAAACGTCCGTCTGGCTGTTCC                                                        >  1:3099015/1‑90
                                GGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAAATCCGGTGCAAAAACGTCCGTCTGGCTGTTCCT                                                       >  1:2009704/1‑90
                                GGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAAATCCGGTGCAAAAACGTCCGTCTGGCTGTTCCT                                                       >  1:1839620/1‑90
                                  AGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAAATCCGGTGCAAAAACGTCCGTCTGGCTGTTCCTGC                                                     >  2:692209/1‑90
                                   GCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAAATCCGGTGCAAAAACGTCCGTCTGGCTGTTCCTGCT                                                    >  1:3435061/1‑90
                                    CACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAAATCCGGTGCAAAAACGTCCGTCTGGCTGTTCCTGCTG                                                   <  2:1085934/90‑1
                                    CACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAAATCCGGTGCAAAAACGTCCGTCTGGCTGTTCCTGCTG                                                   >  2:159027/1‑90
                                    CACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAAATCCGGTGCAAAAACGTCCGTCTGGCTGTTCCTGCTG                                                   <  1:2287749/90‑1
                                      CCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAAATCCGGTGCAAAAACGTCCGTCTGGCTGTTCCTGCTGGG                                                 <  1:114134/90‑1
                                      CCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAAATCCGGTGCAAAAACGTCCGTCTGGCTGTTCCTGCTGGG                                                 >  1:1122151/1‑90
                                       CTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAAATCCGGTGCAAAAACGTCCGTCTGGCTGTTCCTGCTGGGC                                                >  1:3389241/1‑90
                                       CTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAAATCCGGTGCAAAAACGTCCGTCTGGCTGTTCCTGCTGGGC                                                >  2:2824275/1‑90
                                       CTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAAATCCGGTGCAAAAACGTCCGTCTGGCTGTTCCTGCTGGGC                                                >  2:1240904/1‑90
                                        TCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAAATCCGGTGCAAAAACGTCCGTCTGGCTGTTCCTGCTGGGCG                                               >  1:1862369/1‑90
                                          AAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAAATCCGGTGCAAAAACGTCCGTCTGGCTGTTCCTGCTGGGCGTA                                             <  2:1190111/90‑1
                                          AAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAAATCCGGTGCAAAAACGTCCGTCTGGCTGTTCCTGCTGGGCGTA                                             <  2:107549/90‑1
                                           AAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAAATCCGGTGCAAAAACGTCCGTCTGGCTGTTCCTGCTGGGCGTAG                                            >  1:829757/1‑90
                                           AAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAAATCCGGTGCAAAAACGTCCGTCTGGCTGTTCCTGCTGGGCGTAG                                            <  2:1530340/90‑1
                                            AAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAAATCCGGTGCAAAAACGTCCGTCTGGCTGTTCCTGCTGGTCGTAGT                                           >  2:90260/1‑90
                                            AAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAAATCCGGTGCAAAAACGTCCGTCTGGCTGTTCCTGCTGGGCGTAGT                                           >  1:1743491/1‑90
                                             AACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAAATCCGGTGCAAAAACGTCCGTCTGGCTGTTCCTGCTGGGCGTAGTT                                          <  1:2225286/90‑1
                                                ACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAAATCCGGTGCAAAAACGTCCGTCTGGCTGTTCCTGCTGGGCGTAGTTGGC                                       <  1:1007118/90‑1
                                                ACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAAATCCGGTGCAAAAACGTCCGTCTGGCTGTTCCTGCTGGGCGTAGTTGGC                                       >  2:567530/1‑90
                                                ACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAAATCCGGTGCAAAAACGTCCGTCTGGCTGTTCCTGCTGGGCGTAGTTGGC                                       >  1:3291343/1‑90
                                                 CCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAAATCCGGTGCAAAAACGTCCGTCTGGCTGTTCCTGCTGGGCGTAGTTGGCG                                      >  2:1239290/1‑90
                                                   ATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAAATCCGGTGCAAAAACGTCCGTCTGGCTGTTCCTGCTGGGCGTAGTTGGCGTG                                    <  1:2995792/90‑1
                                                    TCATACACTAAATCAGTAAGTTGGCAGCATCACCCAAATCCGGTGCAAAAACGTCCGTCTGGCTGTTCCTGCTGGGCGTAGTTGGCGTGG                                   >  2:36835/1‑90
                                                     CATACACTAAATCAGTAAGTTGGCAGCATCACCCAAATCCGGTGCAAAAACGTCCGTCTGGCTGTTCCTGCTGGGCGTAGTTGGCGTGGT                                  >  1:748104/1‑90
                                                      ATACACTAAATCAGTAAGTTGGCAGCATCACCCAAATCCGGTGCAAAAACGTCCGTCTGGCTGTTCCTGCTGGGCGTAGTTGGCGTGGTT                                 >  2:2302045/1‑90
                                                      ATACACTAAATCAGTAAGTTGGCAGCATCACCCAAATCCGGTGCAAAAACGTCCGTCTGGCTGTTCCTGCTGGGCGTAGTTGGCGTGGTT                                 <  2:2959888/90‑1
                                                      ATACACTAAATCAGTAAGTTGGCAGCATCACCCAAATCCGGTGCAAAAACGTCCGTCTGGCTGTTCCTGCTGGGCGTAGTTGGCGTGGTT                                 >  1:2929279/1‑90
                                                      ATACACTAAATCAGTAAGTTGGCAGCATCACCCAAATCCGGTGCAAAAACGTCCGTCTGGCTGTTCCTGCTGGGCGTAGTTGGCGTGGTT                                 >  1:1625719/1‑90
                                                       TACACTAAATCAGTAAGTTGGCAGCATCACCCAAATCCGGTGCAAAAACGTCCGTCTGGCTGTTCCTGCTGGGCGTAGTTGGCGTGGTTA                                <  1:2785723/90‑1
                                                         CACTAAATCAGTAAGTTGGCAGCATCACCCAAATCCGGTGCAAAAACGTCCGTCTGGCTGTTCCTGCTGGGCGTAGTTGGCGTGGTTATC                              <  1:2246477/90‑1
                                                            TAAATCAGTAAGTTGGCAGCATCACCCAAATCCGGTGCAAAAACGTCCGTCTGGCTGTTCCTGCTGGGCGTAGTTGGCGTGGTTATCTAT                           >  1:727972/1‑90
                                                             AAATCAGTAAGTTGGCAGCATCACCCAAATCCGGTGCAAAAACGTCCGTCTGGCTGTTCCTGCTGGGCGTAGTTGGCGTGGTTATCTATG                          <  2:1898949/90‑1
                                                              AATCAGTAAGTTGGCAGCATCACCCAAATCCGGTGCAAAAACGTCCGTCTGGCTGTTCCTGCTGGGCGTAGTTGGCGTGGTTATCTATGC                         <  2:2574221/90‑1
                                                                TCAGTAAGTTGGCAGCATCACCCAAATCCGGTGCAAAAACGTCCGTCTGGCTGTTCCTGCTGGGCGTAGTTGGCGTGGTTATCTATGCAA                       >  2:2652084/1‑90
                                                                 CAGTAAGTTGGCAGCATCACCCAAATCCGGTGCAAAAACGTCCGTCTGGCTGTTCCTGCTGGGCGTAGTTGGCGTGGTTATCTATGCAAT                      <  1:2088306/90‑1
                                                                  AGTAAGTTGGCAGCATCACCCAAATCCGGTGCAAAAACGTCCGTCTGGCTGTTCCTGCTGGGCGTAGTTGGCGTGGTTATCTATGCAATC                     <  1:1340562/90‑1
                                                                   GTAAGTTGGCAGCATCACCCAAATCCGGTGCAAAAACGTCCGTCTGGCTGTTCCTGCTGGGCGTAGTTGGCGTGGTTATCTATGCAATCA                    <  2:1209164/90‑1
                                                                   GTAAGTTGGCAGCATCACCCAAATCCGGTGCAAAAACGTCCGTCTGGCTGTTCCTGCTGGGCGTAGTTGGCGTGGTTATCTATGCAACCA                    <  1:1332860/90‑1
                                                                    TAAGTTGGCAGCATCACCCAAATCCGGTGCAAAAACGTCCGTCTGGCTGTTCCTGCTGGGCGTAGTTGGCGTGGTTATCTATGCAATCAT                   >  2:3432832/1‑90
                                                                     AAGTTGGCAGCATCACCCAAATCCGGTGCAAAAACGTCCGTCTGGCTGTTCCTGCTGGGCGTAGTTGGCGTGGTTATCTATGCAATCATC                  <  2:1836448/90‑1
                                                                      AGTTGGCAGCATCACCCAAATCCGGTGCAAAAACGTCCGTCTGGCTGTTCCTGCTGGGCGTAGTTGGCGTGGTTATCTATGCAATCATCA                 >  1:1751879/1‑90
                                                                      AGTTGGCAGCATCACCCAAATCCGGTGCAAAAACGTCCGTCTGGCTGTTCCTGCTGGGCGTAGTTGGCGTGGTTATCTATGCAATCATCA                 <  2:2689478/90‑1
                                                                      AGTTGGCAGCATCACCCAAATCCGGTGCAAAAACGTCCGTCTGGCTGTTCCTGCTGGGCGTAGTTGGCGTGGTTATCTATGCAATCATCA                 >  1:44626/1‑90
                                                                      AGTTGGCAGCATCACCCAAATCCGGTGCAAAAACGTCCGTCTGGCTGTTCCTGCTGGGCGTAGTTGGCGTGGTTATCTATGCAATCATCA                 >  1:3007137/1‑90
                                                                       GTTGGCAGCATCCCCCAAATCCGGTGCAAAAACGTCCGTCTGGCTGTTCCTGCTGGGCGTAGTTGGCGTGGTTATCTATGCAATCATCAA                <  1:2588719/90‑1
                                                                       GTTGGCAGCATCACCCAAATCCGGTGCAAAAACGTCCGTCTGGCTGTTCCTGCTGGGCGTAGTTGGCGTGGTTATCTATGCAATCATCAA                >  2:1756295/1‑90
                                                                        TTGGCAGCATCACCCAAATCCGGTGCAAAAACGTCCGTCTGGCTGTTCCTGCTGGGCGTAGTTGGCGTGGTTATCTATGCAATCATCAAC               <  1:535539/90‑1
                                                                         TGGCAGCATCACCCAAATCCGGTGCAAAAACGTCCGTCTGGCTGTTCCTGCTGGGCGTAGTTGGCGTGGTTATCTATGCAATCATCAACA              <  2:2205547/90‑1
                                                                          GGCAGCATCACCCAAATCCGGTGCAAAAACGTCCGTCTGGCTGTTCCTGCTGGGCGTAGTTGGCGTGGTTATCTATGCAATCATCAACAG             <  1:1304519/90‑1
                                                                          GGCAGCATCACCCAAATCCGGTGCAAAAACGTCCGTCTGGCTGTTCCTGCTGGGCGTAGTTGGCGTGGTTATCTATGCAATCATCAACAG             >  2:3186336/1‑90
                                                                           GCAGCATCACCCAAATCCGGTGCAAAAACGTCCGTCTGGCTGTTCCTGCTGGGCGTAGTTGGCGTGGTTATCTATGCAATCATCAACAGC            <  1:737569/90‑1
                                                                           GCAGCATCACCCAAATCCGGTGCAAAAACGTCCGTCTGGCTGTTCCTGCTGGGCGTAGTTGGCGTGGTTATCTATGCAATCATCAACAGC            <  2:3011557/90‑1
                                                                             AGCATCACCCAAATCCGGTGCAAAAACGTCCGTCTGGCTGTTCCTGCTGGGCGTAGTTGGCGTGGTTATCTATGCAATCATCAACAGCCC          <  1:1423934/90‑1
                                                                              GCATCACCCAAATCCGGTGCAAAAACGTCCGTCTGGCTGTTCCTGCTGGGCGTAGTTGGCGTGGTTATCTATGCAATCATCAACAGCCCA         <  2:1473759/90‑1
                                                                                ATCACCCAAATCCGGTGCAAAAACGTCCGTCTGGCTGTTCCTGCTGGGCGTAGTTGGCGTGGTTATCTATGCAATCATCAACAGCCCAAG       >  2:2064079/1‑90
                                                                                ATCACCCAAATCCGGTGCAAAAACGTCCGTCTGGCTGTTCCTGCTGGGCGTAGTTGGCGTGGTTATCTATGCAATCATCAACAGCCCAAG       >  1:362072/1‑90
                                                                                  CACCCAAATCCGGTGCAAAAACGTCCGTCTGGCTGTTCCTGCTGGGCGTAGTTGGCGTGGTTATCTATGCAATCATCAACAGCCCAAGCA     <  1:1568176/90‑1
                                                                                  CACCCAAATCCGGTGCAAAAACGTCCGTCTGGCTGTTCCTGCTGGGCGTAGTTGGCGTGGTTATCTATGCAATCATCAACAGCCCAAGCA     >  2:2604970/1‑90
                                                                                     CCAAATCCGGTGCAAAAACGTCCGTCTGGCTGTTCCTGCTGGGCGTAGTTGGCGTGGTTATCTATGCAATCATCAACAGCCCAAGCATGG  >  2:3278217/1‑90
                                                                                     CCAAATCCGGTGCAAAAACGTCCGTCTGGCTGTTCCTGCTGGGCGTAGTTGGCGTGGTTATCTATGCAATCATCAACAGCCCAAGCATGG  <  2:2761360/90‑1
                                                                                     CCAAATCCGGTGCAAAAACGTCCGTCTGGCTGTTCCTGCTGGGCGTAGTTGGCGTGGTTATCTATGCAATCATCAACAGCCCAAGCATGG  <  1:2487734/90‑1
                                                                                                                                                                               
AGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  AC_000091/4056902‑4056987
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CAAATCCGGTGCAAAAACGTCCGTCTGGCTGTTCCTGCTGGGCGTAGTTGGCGTGGTTATCTATGCAATCATCAACAGCCCAAGCATGG  <  AC_000091/4370795‑4370707

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.