Predicted mutation
evidence seq id position mutation annotation gene description
MC JC AC_000091 1,413,639 Δ23,060 bp [ydaO]ynaE 30 genes

Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ AC_000091 1413639 1436698 23060 143 [0] [0] 140 [ydaO]–ynaE [ydaO],intR,ydaQ,ydaC,lar,recT,recE,racC,ydaE,kil,sieB,ydaF,ydaG,racR,ydaS,ydaT,ydaU,ydaV,ydaW,rzpR,rzoR,trkG,ynaK,ydaY,ynaA,insH,stfR,tfaR,pinR,ynaE

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? AC_000091 = 14136380 (0.000)98 (1.040) 71/126 0.1 100% coding (25/936 nt) ydaO predicted C32 tRNA thiolase
?AC_000091 1436699 = 0 (0.000)intergenic (‑728/+200) ynaE/uspF predicted DNA‑binding transcriptional regulator/stress‑induced protein, ATP‑binding protein

Only 100 of 140 total aligned reads displayed.

TTTAACACATTGAAAAATAAGTAAAATACTTATGAGTCAGAGAGTTGTGATTTTTGCCCTTACTTGTTCAGGTTGTATTGTTCTTTCTTACTAATTTCTTGATTTTGCGACATTTAAAAGCGACTCAATTCGTTATATGGCATCAGAAGAGTATGCGTCATGCCGGAACGCCCAGCATA  >  AC_000091/1436610‑1436788
                                                                                         |                                                                                         
tcttcaatcatattgaagtcagcaatggcttcgcccacgttacgacgcagacgtttttgtaatttgttcaggttgtattgttctttctta                                                                                           >  1:2391269‑M2/90‑90 (MQ=255)
tcttcaatcatattgaagtcagcaatggcttcgcccacgttacgacgcagacgtttttgtaatttgttcaggttgtattgttctttctta                                                                                           <  1:571540‑M2/1‑1 (MQ=255)
tcttcaatcatattgaagtcagcaatggcttcgcccacgttacgacgcagacgtttttgtaatttgttcaggttgtattgttctttctta                                                                                           <  1:1539663‑M2/1‑1 (MQ=255)
  ttcaatcatattgaagtcagcaatggcttcgcccacgttacgacgcagacgtttttgtaatttgttcaggttgtattgttctttcttACt                                                                                         >  2:3220224‑M2/88‑90 (MQ=255)
    caatcatattgaagtcagcaatggcttcgcccacgttacgacgcagacgtttttgtaatttgttcaggttgtattgttctttcttACTaa                                                                                       <  2:446257‑M2/5‑1 (MQ=255)
      atcatattgaagtcagcaatggcttcgcccacgttacgacgcagacgtttttgtaatttgttcaggttgtattgttctttcttACTAAtt                                                                                     >  1:281865‑M2/84‑90 (MQ=255)
        catattgaagtcagcaatggcttcgcccacgttacgacgcagacgtttttgtaatttgttcaggttgtattgttctttcttACTAATTTc                                                                                   <  2:2465395‑M2/9‑1 (MQ=255)
         atattgaagtcagcaatggcttcgcccgcgttacgacgcagacgtttttgtaatttgttcaggttgtattgttctttcttACTAATTTCt                                                                                  <  1:1147468‑M2/10‑1 (MQ=255)
         atattgaagtcagcaatggcttcgcccacgttacgacgcagacgtttttgtaatttgttcaggttgtattgttctttcttACTAATTTCt                                                                                  >  1:1079796‑M2/81‑90 (MQ=255)
          tattgaagtcagcaatggcttcgcccacgttacgacgcagacgtttttgtaatttgttcaggttgtattgttctttcttACTAATTTCtt                                                                                 <  1:705243‑M2/11‑1 (MQ=255)
          tattgaagtcagcaatggcttcgcccacgttacgacgcagacgtttttgtaatttgttcaggttgtattgttctttcttACTAATTTCtt                                                                                 <  1:1005677‑M2/11‑1 (MQ=255)
           attgaagtcagcaatggcttcgcccacgttacgacgcagacgtttttgtaatttgttcaggttgtattgttctttcttACTAATTTCTTg                                                                                <  1:579438‑M2/12‑1 (MQ=255)
           attgaagtcagcaatggcttcgcccacgttacgacgcagacgtttttgtaatttgttcaggttgtattgttctttcttACTAATTTCTTg                                                                                >  2:21051‑M2/79‑90 (MQ=255)
             tgaagtcagcaatggcttcgcccacgttacgacgcagacgtttttgtaatttgttcaggttgtattgttctttcttACTAATTTCTTGAt                                                                              >  2:1885777‑M2/77‑90 (MQ=255)
             tgaagtcagcaatggcttcgcccacgttacgacgcagacgtttttgtaatttgttcaggttgtattgttctttcttACTAATTTCTTGAt                                                                              >  2:524640‑M2/77‑90 (MQ=255)
             tgaagtcagcaatggcttcgcccacgttacgacgcagacgtttttgtaatttgttcaggttgtattgttctttcttACTAATTTCTTGAt                                                                              >  1:3213287‑M2/77‑90 (MQ=255)
              gaagtcagcaatggcttcgcccacgttacgacgcagacgtttttgtaatttgttcaggttgtattgttctttcttACTAATTTCTTGAtt                                                                             >  2:174150‑M2/76‑90 (MQ=255)
              gaagtcagcaatggcttcgcccacgttacgacgcagacgtttttgtaatttgttcaggttgtattgttctttcttACTAATTTCTTGAtt                                                                             <  2:453277‑M2/15‑1 (MQ=255)
                agtcagcaatggcttcgcccacgttacgacgcagacgtttttgtaatttgttcaggttgtgttgttctttcttACTAATTTCTTGAtttt                                                                           >  2:1845118‑M2/74‑90 (MQ=255)
                 gtcagcaatggcttcgcccacgttacgacgcagacgtttttgtaatttgttcaggttgtattgttctttcttACTAATTTCTTGATTTTg                                                                          <  1:1141519‑M2/18‑1 (MQ=255)
                  tcagcaatggcttcgcccacgttacgacgcagacgtttttgtaatttgttcaggttgtattgttctttcttACTAATTTCTTGATTTTGc                                                                         >  2:1623270‑M2/72‑90 (MQ=255)
                  tcagcaatggcttcgcccacgttacgacgcagacgtttttgtaatttgttcaggttgtattgttctttcttACTAATTTCTTGATTTTGc                                                                         <  2:465164‑M2/19‑1 (MQ=255)
                    agcaatggcttcgcccacgttacgacgcagacgtttttgtaatttgttcaggttgtattgttctttcttACTAATTTCTTGATTTTGCGa                                                                       >  2:1475876‑M2/70‑90 (MQ=255)
                      caatggcttcgcccacgttacgacgcagacgtttttgtaatttgttcaggttgtattgttctttcttACTAATTTCTTGATTTTGCGACa                                                                     <  1:410282‑M2/23‑1 (MQ=255)
                      caatggcttcgcccacgttacgacgcagacgtttttgtaatttgttcaggttgtattgttctttcttACTAATTTCTAGATTTTGCGACa                                                                     >  1:375444‑M2/68‑90 (MQ=255)
                       aatggcttcgcccacgttacgacgcagacgtttttgtaatttgttcaggttgtattgttctttcttACTAATTTCTTGATTTTGCGACAt                                                                    >  1:782589‑M2/67‑90 (MQ=255)
                       aatggcttcgcccacgttacgacgcagacgtttttgtaatttgttcaggttgtattgttctttcttACTAATTTCTTGATTTTGCGACAt                                                                    >  1:2818017‑M2/67‑90 (MQ=255)
                        atggcttcgcccacgttacgacgcagacgtttttgtaatttgttcaggttgtattgttctttcttACTAATTTCTTGATTTTGCGACAtt                                                                   <  2:2658882‑M2/25‑1 (MQ=255)
                         tggcttcgcccacgttacgacgcagacgtttttgtaatttgttcaggttgtattgttctttcttACTAATTTCTTGATTTTGCGACAttt                                                                  <  2:460173‑M2/26‑1 (MQ=255)
                         tggcttcgcccacgttacgacgcagacgtttttgtaatttgttcaggttgtattgttctttcttACTAATTTCTTGATTTTGCGACAttt                                                                  <  2:575189‑M2/26‑1 (MQ=255)
                         tggcttcgcccacgttacgacgcagacgtttttgtaatttgttcaggttgtattgttctttcttACTAATTTCTTGATTTTGCGACAttt                                                                  <  2:2317512‑M2/26‑1 (MQ=255)
                            cttcgcccacgttacgacgcagacgtttttgtaatttgttcaggttgtattgttctttcttACTAATTTCTTGATTTTGCGACATTTaaa                                                               <  1:3057490‑M2/29‑1 (MQ=255)
                            cttcgcccacgttacgacgcagacgtttttgtaatttgttcaggttgtattgttctttcttACTAATTTCTTGATTTTGCGACATTTaaa                                                               >  1:3129143‑M2/62‑90 (MQ=255)
                            cttcgcccacgttacgacgcagacgtttttgtaatttgttcaggttgtattgttctttcttACTAATTTCTTGATTTTGCGACATTTaaa                                                               <  1:278555‑M2/29‑1 (MQ=255)
                               cgcccacgttacgacgcagacgtttttgtaatttgttcaggttgtattgttctttcttACTAATTTCTTGATTTTGCGACATTTAAAAGc                                                            <  1:1677860‑M2/32‑1 (MQ=255)
                               cgcccacgttacgacgcagacgtttttgtaatttgttcaggttgtattgttctttcttACTAATTTCTTGATTTTGCGACATTTAAAAGc                                                            <  1:581530‑M2/32‑1 (MQ=255)
                                gcccacgttacgacgcagacgtttttgtaatttgttcaggttgtattgttctttcttACTAATTTCTTGATTTTGCGACATTTAAAAGCg                                                           >  1:3326972‑M2/58‑90 (MQ=255)
                                 cccacgttacgacgcagacgtttttgtaatttgttcaggttgtattgttctttcttACTAATTTCTTGATTTTGCGACATTTAAAAGCGa                                                          >  2:917561‑M2/57‑90 (MQ=255)
                                  ccacgttacgacgcagacgtttttgtaatttgttcaggttgtattgttctttcttACTAATTTCTTGATTTTGCGACATTTAAAAGCGAc                                                         >  2:1148332‑M2/56‑90 (MQ=255)
                                   cacgttacgacgcagacgtttttgtaatttgttcaggttgtattgttctttcttACTAATTTCTTGATTTTGTGACATTTAAAAGCGACt                                                        >  1:807968‑M2/55‑90 (MQ=255)
                                   cacgttacgacgcagacgtttttgtaatttgttcaggttgtattgttctttcttACTAATTTCTTGATTTTGCGACATTTAAAAGCGACt                                                        <  2:2520408‑M2/36‑1 (MQ=255)
                                      gttacgacgcagacgtttttgtaatttgttcaggttgtattgttctttcttACTAATTTCTTGATTTTGCGACATTTAAAAGCGACTCaa                                                     <  1:2852537‑M2/39‑1 (MQ=255)
                                      gttacgacgcagacgtttttgtaatttgttcaggttgtattgttctttcttACTAATTTCTTGATTTTGCGACATTTAAAAGCGACTCaa                                                     >  2:1922256‑M2/52‑90 (MQ=255)
                                      gttacgacgcagacgtttttgtaatttgttcaggttgtattgttctttcttACTAATTTCTTGATTTTGCGACATTTAAAAGCGACTCaa                                                     >  2:3032993‑M2/52‑90 (MQ=255)
                                       ttacgacgcagacgtttttgtaatttgttcaggttgtattgttctttcttACTAATTTCTTGATTTTGCGACATTTAAAAGCGACTCAAt                                                    <  2:1615754‑M2/40‑1 (MQ=255)
                                           gacgcagacgtttttgtaatttgttcaggttgtattgttctttcttACTAATTTCTTGATTTTGCGACATTTAAAAGCGACTCAATTCGt                                                <  1:3018972‑M2/44‑1 (MQ=255)
                                           gacgcagacgtttttgtaatttgttcaggttgtattgttctttcttACTAATTTCTTGATTTTGCGACATTTAAAAGCGACTCAATTCGt                                                >  2:740062‑M2/47‑90 (MQ=255)
                                             cgcagacgtttttgtaatttgttcaggttgtattgttctttcttACTAATTTCTTGATTTTGCGACATTTAAAAGCGACTCAATTCGTta                                              >  2:2018495‑M2/45‑90 (MQ=255)
                                              gcagacgtttttgtaatttgttcaggttgtattgttctttcttACTAATTTCTTGATTTTGCGACATTTAAAAGCGACTCAATTCGTtat                                             >  1:836524‑M2/44‑90 (MQ=255)
                                              gcagacgtttttgtaatttgttcaggttgtattgttctttcttACTAATTTCTTGATTTTGCGACATTTAAAAGCGACTCAATTCGTtat                                             >  2:2414149‑M2/44‑90 (MQ=255)
                                              gcagacgtttttgtaatttgttcaggttgtattgttctttcttACTAATTTCTTGATTTTGCGACATTTAAAAGCGACTCAATTCGTtat                                             >  1:1809195‑M2/44‑90 (MQ=255)
                                               cagacgtttttgtaatttgttcaggttgtattgttctttcttACTAATTTCTTGATTTTGCGACATTTAAAAGCGACTCAATTCGTtata                                            <  1:536543‑M2/48‑1 (MQ=255)
                                                agacgtttttgtaatttgttcaggttgtattgttctttcttACTAATTTCTTGATTTTGCGACATTTAAAAGCGACTCAATTCGTTatat                                           >  2:718862‑M2/42‑90 (MQ=255)
                                                agacgtttttgtaatttgttcaggttgtattgttctttcttACTAATTTCTTGATTTTGCGACATTTAAAAGCGACTCAATTCGTTatat                                           >  2:2118396‑M2/42‑90 (MQ=255)
                                                 gacgtttttgtaatttgttcaggttgtattgttctttcttACTAATTTCTTGATTTTGCGACATTTAAAAGCGACTCAATTCGTTATATg                                          <  1:1582183‑M2/50‑1 (MQ=255)
                                                   cgtttttgtaatttgttcaggttgtattgttctttcttACTAATTTCTTGATTTTGCGACATTTAAAAGCGACTCAATTCGTTATATGGc                                        >  2:3033412‑M2/39‑90 (MQ=255)
                                                   cgtttttgtaatttgttcaggttgtattgttctttcttACTAATTTCTTGATTTTGCGACATTTAAAAGCGACTCAATACGTTATATGGc                                        <  1:1178223‑M2/52‑1 (MQ=255)
                                                    gtttttgtaatttgttcaggttgtattgttctttcttACTAATTTCTTGATTTTGCGACATTTAAAAGCGACTCAATTCGTTATATGGCa                                       <  2:3054934‑M2/53‑1 (MQ=255)
                                                    gtttttgtaatttgttcaggttgtattgttctttcttACTAATTTCTTGATTTTGCGACATTTAAAAGCGACTCAATTCGTTATATGGCa                                       <  2:2080220‑M2/53‑1 (MQ=255)
                                                    gtttttgtaatttgttcaggttgtattgttctttcttACTAATTTCTTGATTTTGCGACATTTAAAAGCGACTCAATTCGTTATATGGCa                                       <  2:2797114‑M2/53‑1 (MQ=255)
                                                      ttttgtaatttgttcaggttgtattgttctttcttACTAATTTCTTGATTTTGCGACATTTAAAAGCGACTCAATTCGTTATATGGCATc                                     <  2:72158‑M2/55‑1 (MQ=255)
                                                      ttttgtaatttgttcaggttgtattgttctttcttACTAATTTCTTGATTTTGCGACATTTAAAAGCGACTCAATTCGTTATATGGCATc                                     <  2:968613‑M2/55‑1 (MQ=255)
                                                      ttttgtaatttgttcaggttgtattgttctttcttACTAATTTCTTGATTTTGCGACATTTAAAAGCGACTCAATTCGTTATATGGCATc                                     <  1:250819‑M2/55‑1 (MQ=255)
                                                      ttttgtaatttgttcaggttgtattgttctttcttACTAATTTCTTGATTTTGCGACATTTAAAAGCGACTCAATTCGTTATATGGCATc                                     >  1:678929‑M2/36‑90 (MQ=255)
                                                        ttgtaatttgttcaggttgtattgttctttcttACTAATTTCTTGATTTTGCGACATTTAAAAGCGACTCAATTCGTTATATGGCATCag                                   >  1:2007001‑M2/34‑90 (MQ=255)
                                                        ttgtaatttgttcaggttgtattgttctttcttACTAATTTCTTGATTTTGCGACATTTAAAAGCGACTCAATTCGTTATATGGCATCag                                   <  2:1799699‑M2/57‑1 (MQ=255)
                                                        ttgtaatttgttcaggttgtattgttctttcttACTAATTTCTTGATTTTGCGACATTTAAAAGCGACTCAATTCGTTATATGGCATCag                                   >  2:1144247‑M2/34‑90 (MQ=255)
                                                               ttgttcaggttgtattgttctttcttACTAATTTCTTGATTTTGCGACATTTAAAAGCGACTCAATTCGTTATATGGCATCAGAAGAGTa                            >  2:550222‑M2/27‑90 (MQ=255)
                                                                tgttcaggttgtattgttctttcttACTAATTTCTTGATTTTGCGACATTTAAAAGCGACTCAATTCGTTATATGGCATCAGAAGAGTAt                           <  1:1937654‑M2/65‑1 (MQ=255)
                                                                tgttcaggttgtattgttctttcttACTAATTTCTTGATTTTGCGACATTTAAAAGCGACTCAATTCGTTATATGGCATCAGAAGAGTAt                           <  2:3107389‑M2/65‑1 (MQ=255)
                                                                 gttcaggttgtattgttctttcttACTAATTTCTTGATTTTGCGACATTTAAAAGCGACTCAATTCGTTATATGGCATCAGAAGAGTATg                          <  1:294571‑M2/66‑1 (MQ=255)
                                                                 gttcaggttgtattgttctttcttACTAATTTCTTGATTTTGCGACATTTAAAAGCGACTCAATTCGTTATATGGCATCAGAAGAGTATg                          <  1:533845‑M2/66‑1 (MQ=255)
                                                                 gttcaggtggtattgttctttcttACTAATTTCTTGATTTTGCGACATTTAAAAGCGACTCAATTCGTTATATGGCATCAGAAGAGTATg                          <  1:1387249‑M2/66‑1 (MQ=255)
                                                                  ttcaggttgtattgttctttcttACTAATTTCTTGATTTTGCGACATTTAAAAGCGACTCAATTCGTTATATGGCATCAGAAGAGTATGc                         >  1:2698465‑M2/24‑90 (MQ=255)
                                                                   tcaggttgtattgttctttcttACTAATTTCTTGATTTTGCGACATTTAAAAGCGACTCAATTCGTTATATGGCATCAGAAGAGTATGCg                        >  2:1762042‑M2/23‑90 (MQ=255)
                                                                   tcaggttgtattgttctttcttACTAATTTCTTGATTTTGCGACATTTAAAAGCGACTCAATTCGTTATATGGCATCAGAAGAGTATGCg                        <  1:2107464‑M2/68‑1 (MQ=255)
                                                                    caggttgtattgttctttcttACTAATTTCTTGATTTTGCGACATTTAAAAGCGACTCAATTCGTTATATGGCATCAGAAGAGTATGCGt                       >  2:153974‑M2/22‑90 (MQ=255)
                                                                     aggttgtattgttctttcttACTAATTTCTTGATTTTGCGACATTTAAAAGCGACTCAATTCGTTATATGGCATCAGAAGAGTATGCGTc                      <  1:3473517‑M2/70‑1 (MQ=255)
                                                                      ggttgtattgttctttcttACTAATTTCTTGATTTTGCGACATTTAAAAGCGACTCAATTCGTTATATGGCATCAGAAGAGTATGCGTCa                     >  2:1702085‑M2/20‑90 (MQ=255)
                                                                         tgtattgttctttcttACTAATTTCTTGATTTTGCGACATTTAAAAGCGACTCAATTCGTTATATGGCATCAGAAGAGTATGCGTCATGc                  >  1:3392256‑M2/17‑90 (MQ=255)
                                                                          gtattgttctttcttACTAATTTCTTGATTTTGCGACATTTAAAAGCGACTCAATTCGTTATATGGCATCAGAAGAGTATGCGTCATGcc                 >  1:1355142‑M2/16‑90 (MQ=255)
                                                                          gtattgttctttcttACTAATTTCTTGATTTTGCGACATTTAAAAGCGACTCAATTCGTTATATGGCATCAGAAGAGTATGCGTCATGcc                 >  1:2367025‑M2/16‑90 (MQ=255)
                                                                          gtattgttctttcttACTAATTTCTTGATTTTGCGACATTTAAAAGCGACTCAATTCGTTATATGGCATCAGAAGAGTATGCGTCATGcc                 <  1:98538‑M2/75‑1 (MQ=255)
                                                                           tattgttctttcttACTAATTTCTTGATTTTGCGACATTTAAAAGCGACTCAATTCGTTATATGGCATCAGAAGAGTATGCGTCATGCCg                <  1:2902106‑M2/76‑1 (MQ=255)
                                                                           tattgttctttcttACTAATTTCTTGATTTTGCGACATTTAAAAGCGACTCAATTCGTTATATGGCATCAGAAGAGTATGCGTCATGCCg                <  2:3323216‑M2/76‑1 (MQ=255)
                                                                           tattgttctttcttACTAATTTCTTGATTTTGCGACATTTAAAAGCGACTCAATTCGTTATATGGCATCAGAAGAGTATGCGTCATGCCg                <  2:3357258‑M2/76‑1 (MQ=255)
                                                                             ttgttctttcttACTAATTTCTTGATTTTGCGACATTTAAAAGCGACTCAATTCGTTATATGGCATCAGAAGAGTATGCGTCATGCCGGa              >  1:467333‑M2/13‑90 (MQ=255)
                                                                              tgttctttcttACTAATTTCTTGATTTTGCGACATTTAAAAGCGACTCAATTCGTTATATGGCATCAGAAGAGTATGCGTCATGCCGGaa             >  2:3311037‑M2/12‑90 (MQ=255)
                                                                               gttctttcttACTAATTTCTTGATTTTGCGACATTTAAAAGCGACTCAATTCGTTATATGGCATCAGAAGAGTATGCGTCATGCCGGAAc            >  1:2849341‑M2/11‑90 (MQ=255)
                                                                               gttctttcttACTAATTTCTTGATTTTGCGACATTTAAAAGCGACTCAATTCGTTATATGGCATCAGAAGAGTATGCGTCATGCCGGAAc            >  1:50780‑M2/11‑90 (MQ=255)
                                                                                ttctttcttACTAATTTCTTGATTTTGCGACATTTAAAAGCGACTCAATTCGTTATATGGCATCAGAAGAGTATGCGTCATGCCGGAACg           >  1:1012770‑M2/10‑90 (MQ=255)
                                                                                 tctttcttACTAATTTCTTGATTTTGCGACATTTAAAAGCGACTCAATTCGTTATATGGCATCAGAAGAGTATGCGTCATGCCGGAACGc          >  1:2679049‑M2/9‑90 (MQ=255)
                                                                                   tttcttACTAATTTCTTGATTTTGCGACATTTAAAAGCTACTCAATTCGTTATATGGCATCAGAAGAGTATGCGTCATGCCGGAACGccc        <  2:2792085‑M2/84‑1 (MQ=255)
                                                                                    ttcttACTAATTTCTTGATTTTGCGACATTTAAAAGCGACTCAATTCGTTATATGGCATCAGAAGAGTATGCGTCATGCCGGAACGCCCa       >  1:156331‑M2/6‑90 (MQ=255)
                                                                                    ttcttACTAATTTCTTGATTTTGCGACATTTAAAAGCGACTCAATTCGTTATATGGCATCAGAAGAGTATGCGTCATGCCGGAACGCCCa       >  1:91123‑M2/6‑90 (MQ=255)
                                                                                     tcttACTAATTTCTTGATTTTGCGACATTTAAAAGCGACTCAATTCGTTATATGGCATCAGAAGAGTATGCGTCATGCCGGAACGCCCAg      <  1:1146541‑M2/86‑1 (MQ=255)
                                                                                      cttACTAATTTCTTGATTTTGCGACATTTAAAAGCGACTCAATTCGTTATATGGCATCAGAAGAGTATGCGTCATGCCGGAACGCCCAGc     >  1:2105921‑M2/4‑90 (MQ=255)
                                                                                      cttACTAATTTCTTGATTTTGCGACATTTAAAAGCGACTCAATTCGTTATATGGCATCAGAAGAGTATGCGTCATGCCGGAACGCCCAGc     >  1:1666579‑M2/4‑90 (MQ=255)
                                                                                      cttACTAATTTCTTGATTTTGCGACATTTAAAAGCGACTCAATTCGTTATATGGCATCAGAAGAGTATGCGTCATGCCGGAACGCCCAGc     >  1:1032936‑M2/4‑90 (MQ=255)
                                                                                        tACTAATTTCTTGATTTTGCGACATTTAAAAGCGACTCAATTCGTTATATGGCATCAGAAGAGTATGCGTCATGCCGGAACGCCCAGCAt   >  2:1150609‑M2/2‑90 (MQ=255)
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TTTAACACATTGAAAAATAAGTAAAATACTTATGAGTCAGAGAGTTGTGATTTTTGCCCTTACTTGTTCAGGTTGTATTGTTCTTTCTTACTAATTTCTTGATTTTGCGACATTTAAAAGCGACTCAATTCGTTATATGGCATCAGAAGAGTATGCGTCATGCCGGAACGCCCAGCATA  >  AC_000091/1436610‑1436788

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.