| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NZ_CP009273 | = 3572747 | 110 (1.840) | 3 (0.060) | 3/144 | 3.6 | 3.2% | coding (259/696 nt) | yhhW | quercetin 2,3‑dioxygenase |
| ? | NZ_CP009273 | = 3572830 | 84 (1.600) | coding (176/696 nt) | yhhW | quercetin 2,3‑dioxygenase | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
GATCCAGATCTGATACAGATGCAGACGCTCGGTGCTGCTTGGGTTGTACTCTGAGTGACGAATACCCGTACCAGCACTCATAATCTGGAACTCACCCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NZ_CP009273/3572649‑3572747‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑actcacccgcATAAAGATATGGAAATTTTGACCTACGTGCTGGAAGGTACTGTTGAGCATCAGGACAGCATGGGCAATAAAGAGCAGGTTCCGGCGGG < NZ_CP009273/3572830‑3572743 GATCCAGATCTGATACAGATGCAGACGCTCGGTGCTGCTTGGGTTGTACTCTGAGTGACGAATACCCGTACCAGCACTCATAATCTGGAA > 1:746068/1‑90GATCCAGATCTGATACAGATGCAGACGCTCGGTGCTGCTTGGGTTGTACTCTGAGTGACGAATACCCGTACCAGCACTCATAATCTGGAA > 1:848963/1‑90 AGATCTGATACAGATGCAGACGCTCGGTGCTGCTTGGGTTGTACTCTGAGTGACGAATACCCGTACCAGCACTCATAATCTGGAACTCAC > 1:306756/1‑90 AGATCTGATACAGATGCAGACGCTCGGTGCTGCTTGGGTTGTACTCTGAGTGACGAATACCCGTACCAGCACTCATAATCTGGAACTCAC > 2:148483/1‑90 CGGTGCTGCTTGGGTTGTACTCTGAGTGACGAATACCCGTACCAGCACTCATAATCTGGAACTCACCCGGATAAAGATATGGAAATTTTG > 1:1692999/1‑90 GGTTGTACTCTGAGTGACGAATACCCGTACCAGCACTCATAATCTGGAACTCACC > 1:1709092/1‑55 GGTTGTACTCTGAGTGACGAATACCCGTACCAGCACTCATAATCTGGAACTCACC < 2:1709092/55‑1 GAGTGACGAATACCCGTACCAGCACTCATAATCTGGAACT > 1:1718086/1‑40 GAGTGACGAATACCCGTACCAGCACTCATAATCTGGAACT < 2:1718086/40‑1 GACGAATACCCGTACCAGCACTCATAATCTGGAACTCACCCGCATAAAGATATGGAAATTTTGACCTACGTGCTGGAAGGTACTGTTGAG > 2:1683154/1‑90 GTACCAGCACTCATAATCTGGAACTCACCCGCATAAAGATATGGAAATTTTGACCTACGTGCTGGAAGGTACTGTTGAGCATCAGGACAG > 1:994176/1‑90 ACTCACCCGCATAAAGATATGGAAATTTTGACCTACGTGCTGGAAGGTACTGTTGAGCATCAGGACAGCATGGGCAATAAAGAGCAGGTT > 2:1501295/1‑90 TCACCCGCATAAAGATATGGAAATTTTGACCTACGTGCTGGAAGGTACTGTTGAGCATCAGGACAGCATGGGCAATAAAGAGCAGGTTCC > 2:1443202/1‑90 TCACCCGCATAAAGATATGGAAATTTTGACCTACGTGCTGGAAGGTACTGTT < 2:1788606/52‑1 TCACCCGCATAAAGATATGGAAATTTTGACCTACGTGCTGGAAGGTACTGTT > 1:1788606/1‑52 CACCCGCATAAAGATATGGAAATTTTGACCTACGTGCTGGAA > 2:586490/1‑42 CACCCGCATAAAGATATGGAAATTTTGACCTACGTGCTGGAA < 1:586490/42‑1 GCATAAAGATATGGAAATTTTGTCCTACGTGCTGGAAGGTACTGTTGAGCATCAGGACAGCATG > 1:389426/1‑64 GCATAAAGATATGGAAATTTTGACCTACGTGCTGGAAGGTACTGTTGAGCATCAGGACAGCATGGGCAATAAAGAGCAGGTTCCGGCGGG > 1:691738/1‑90 GCATAAAGATATGGAAATTTTGACCTACGTGCTGGAAGGTACTGTTGAGCATCAGGACAGCATGGGCAATAAAGAGCAGGTTCCGGCGGG > 1:1032860/1‑90 GCATAAAGATATGGAAATTTTGACCTACGTGCTGGAAGGTACTGTTGAGCATCAGGACAGCATG < 2:1197974/64‑1 GCATAAAGATATGGAAATTTTGACCTACGTGCTGGAAGGTACTGTTGAGCATCAGGACAGCATG > 1:1197974/1‑64 GCATAAAGATATGGAAATTTTGACCTACGTGCTGGAAGGTACTGTTGAGCATCAGGACAGCATG < 2:389426/64‑1 GATCCAGATCTGATACAGATGCAGACGCTCGGTGCTGCTTGGGTTGTACTCTGAGTGACGAATACCCGTACCAGCACTCATAATCTGGAACTCACCCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NZ_CP009273/3572649‑3572747‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑actcacccgcATAAAGATATGGAAATTTTGACCTACGTGCTGGAAGGTACTGTTGAGCATCAGGACAGCATGGGCAATAAAGAGCAGGTTCCGGCGGG < NZ_CP009273/3572830‑3572743 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |